View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5092-Insertion-1 (Length: 1260)

Name: NF5092-Insertion-1
Description: NF5092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5092-Insertion-1
NF5092-Insertion-1
[»] chr1 (12 HSPs)
chr1 (7-886)||(51376503-51377369)
chr1 (615-752)||(51380803-51380940)
chr1 (911-1019)||(51376389-51376503)
chr1 (32-126)||(20010083-20010177)
chr1 (42-126)||(24195694-24195778)
chr1 (251-297)||(20009870-20009916)
chr1 (251-297)||(24195928-24195974)
chr1 (451-536)||(3967868-3967952)
chr1 (371-446)||(20993654-20993726)
chr1 (373-446)||(52004506-52004576)
chr1 (251-297)||(24766061-24766107)
chr1 (375-434)||(42871981-42872037)
[»] chr2 (4 HSPs)
chr2 (35-126)||(2948250-2948341)
chr2 (371-446)||(33458044-33458116)
chr2 (373-441)||(34478621-34478686)
chr2 (451-548)||(6892953-6893050)
[»] chr8 (4 HSPs)
chr8 (451-560)||(26278528-26278636)
chr8 (372-446)||(38567725-38567796)
chr8 (251-297)||(43265663-43265709)
chr8 (453-523)||(20189739-20189809)
[»] chr4 (12 HSPs)
chr4 (375-450)||(11945185-11945257)
chr4 (371-449)||(2469339-2469414)
chr4 (371-446)||(41055147-41055219)
chr4 (371-441)||(7199617-7199684)
chr4 (407-449)||(49812065-49812107)
chr4 (371-446)||(37517128-37517200)
chr4 (371-446)||(37521344-37521416)
chr4 (371-446)||(55682394-55682466)
chr4 (371-449)||(374617-374692)
chr4 (406-450)||(11945095-11945139)
chr4 (479-558)||(48197279-48197358)
chr4 (406-449)||(48236500-48236543)
[»] chr5 (5 HSPs)
chr5 (371-449)||(17731548-17731623)
chr5 (373-449)||(41992695-41992768)
chr5 (452-536)||(41992791-41992875)
chr5 (451-508)||(34114028-34114085)
chr5 (371-446)||(37369318-37369390)
[»] chr7 (11 HSPs)
chr7 (248-297)||(37068170-37068219)
chr7 (371-446)||(43614147-43614219)
chr7 (371-446)||(46066866-46066938)
chr7 (256-357)||(37068193-37068296)
chr7 (251-297)||(4554282-4554328)
chr7 (371-446)||(11591831-11591903)
chr7 (371-446)||(33516112-33516184)
chr7 (371-441)||(48827191-48827258)
chr7 (371-447)||(37068411-37068484)
chr7 (453-523)||(44274251-44274321)
chr7 (452-502)||(46066789-46066839)
[»] chr3 (7 HSPs)
chr3 (371-446)||(39759741-39759813)
chr3 (371-446)||(43823144-43823216)
chr3 (451-523)||(9688935-9689007)
chr3 (452-558)||(53285932-53286038)
chr3 (32-76)||(9444941-9444985)
chr3 (371-449)||(53286065-53286140)
chr3 (452-502)||(39759841-39759891)
[»] chr6 (3 HSPs)
chr6 (373-435)||(3288181-3288240)
chr6 (371-449)||(11843614-11843689)
chr6 (451-536)||(8365942-8366027)
[»] scaffold0368 (1 HSPs)
scaffold0368 (375-434)||(8551-8607)
[»] scaffold0311 (1 HSPs)
scaffold0311 (475-536)||(1532-1593)


Alignment Details
Target: chr1 (Bit Score: 726; Significance: 0; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 726; E-Value: 0
Query Start/End: Original strand, 7 - 886
Target Start/End: Complemental strand, 51377369 - 51376503
Alignment:
Q  7 agatgaatgccgtggaggtgaaggcgatgttgtttatgatgacgatgatttgggttggctagatgttgaaatagcaagttatgctgctgagcccataatc 106  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||    
T  51377369 agatgaatgccgtggaggtgaaggtgatgttgtttatgatgacgatgatttgggttggctagat-----------aagttatgctgctgagcccataatc 51377281  T
Q  107 aacactaggagccaagcagcatcgtagaatgcagctgcaccttcgcctcagccttggcctaaaccttcaagctctaagggaaaagcaaagatagtggtgg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  51377280 aacactaggagccaagcagcatcgtagaatgcagctgcaccttcgcctcagcgt-ggcctaaaccttcaagctctaagggaaaagcaaagatagtggtgg 51377182  T
Q  207 tagtctggtagatgatgaatatgttcatgatctagaattcgttaattgggaggatgaagaaaaagaggatgaaaaggaagagaatgaagaggagcacatg 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51377181 tagtctggtagatgatgaatatgttcatgatctagaattcgttaattgggaggatgaagaaaaagaggatgaaaaggaagagaatgaagaggagcacatg 51377082  T
Q  307 cacaactctagtggtggaggaaagtgatgaagattttcatgattcttgaaccnnnnnnnnnnatttaagacttgtggcttttatttcaacttatgaatga 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  51377081 cacaactctagtggtggaggaaagtgatgaagattttcatgattcttgaaccttttttttt-atttaagacttgtggcttttatttcaacttatgaatga 51376983  T
Q  407 tacttcatgaattttgagtactgtttaagttatttcagtatttggtattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgct 506  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51376982 tacttcatgaattttgagtaatatttaaggtatttcagtatttggtattaaatgtattagtgttcgcgccaccgaaatagctccctctatgcgccctgct 51376883  T
Q  507 cctgcgccgcaccaatttttgggatggccgggctgcatttcccctttgacaagataggagtgtgcccagannnnnnngattggatttgtctccaagcaat 606  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  51376882 cctgcgccgcaccaatttttgggatggccaggctgcatttcctctttgacaagataggagtgtgcccagatttttttgattggatttgtctccaagcaat 51376783  T
Q  607 catttctcatattatgaactgaacaaatcaaattttatcttgcatgcggttcttaatgaaagttaggagagctttgagagacatcaatgtggtcacaatg 706  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51376782 catttctcatattatgaactgaacgaatcaaattttatcttgcacgcggttcttaatgaaagttaggagagctttgagagacatcaatgcggtcacaatg 51376683  T
Q  707 cgtatttgataattacaaatttaatgtttgatgctcaaaacttaaagattaatgtcaaatgcttgaaagttaaaaatatgtaccttgcgtattttatcag 806  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  51376682 cgtatttgataattacaaatttaatgtttgatgctcgaaacttaaagattaatgtcaaatgcttgaaagttaaaaatatgtaccttgcgtattttatgag 51376583  T
Q  807 tttgtctcatttacttgtgatgatgggtaactttgtaaggcgtttaagcctaatgcaatatgccctatatcatctctgga 886  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51376582 tttgtctcatttacttgtgatgatgggtaactttgtaaggcgtttaagcctaatgcaatatgccctatatcatctctgga 51376503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 615 - 752
Target Start/End: Complemental strand, 51380940 - 51380803
Alignment:
Q  615 atattatgaactgaacaaatcaaattttatcttgcatgcggttcttaatgaaagttaggagagctttgagagacatcaatgtggtcacaatgcgtatttg 714  Q
    ||||||||||||||||| |||||||||| || || ||| |||||||||| || |||||||||||||||||||||| ||| ||||||| ||||  |||||     
T  51380940 atattatgaactgaacatatcaaattttgtcatggatgtggttcttaataaaggttaggagagctttgagagacaccaaggtggtcaaaatgaatattta 51380841  T
Q  715 ataattacaaatttaatgtttgatgctcaaaacttaaa 752  Q
    | ||||  ||||||||| |||||| | ||||| |||||    
T  51380840 aaaatttaaaatttaatttttgatacacaaaagttaaa 51380803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 911 - 1019
Target Start/End: Complemental strand, 51376503 - 51376389
Alignment:
Q  911 aatctgatttaggcattcaaatttcaatggcttggt-agagaagcttgggtcattggaaagtaaac-aatattatccaaaa--ggt-gtccatgt-gctt 1004  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||| |||||||||  ||| |||||| | ||||    
T  51376503 aatctgatttaggcattcaaatttcaatggcttagtaagagaagcttgggccattggaaagtaaacaaataatatccaaaaagggtggtccatatggctt 51376404  T
Q  1005 tggcactggtatctt 1019  Q
    |||||||||||||||    
T  51376403 tggcactggtatctt 51376389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 20010177 - 20010083
Alignment:
Q  32 gatgttgtttatgatgacgatgatttgggttggctagatgttgaaatagcaagttatgctgctgagcccataatcaacactaggagccaagcagc 126  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||   ||||||  |||||| |||||| || ||||||||||||| ||||||||    
T  20010177 gatgttgtttttgatgatgatgatttgaattggctagatgttgaagaggcaagtggtgctgccgagcccttattcaacactaggagtcaagcagc 20010083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 24195694 - 24195778
Alignment:
Q  42 atgatgacgatgatttgggttggctagatgttgaaatagcaagttatgctgctgagcccataatcaacactaggagccaagcagc 126  Q
    ||||||| |||||||||  ||| ||||||||||||   ||||||  |||||| |||||| || ||||||||||||||||||||||    
T  24195694 atgatgatgatgatttgaattgtctagatgttgaagaggcaagtggtgctgccgagcccttattcaacactaggagccaagcagc 24195778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 20009916 - 20009870
Alignment:
Q  251 attgggaggatgaagaaaaagaggatgaaaaggaagagaatgaagag 297  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||    
T  20009916 attggggggatgaagaaaaagaggatgaagaggaagaaaatgaagag 20009870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 24195928 - 24195974
Alignment:
Q  251 attgggaggatgaagaaaaagaggatgaaaaggaagagaatgaagag 297  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||    
T  24195928 attggggggatgaagaaaaagaggatgaagaggaagaaaatgaagag 24195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 451 - 536
Target Start/End: Original strand, 3967868 - 3967952
Alignment:
Q  451 gtattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatttttgggatggccg 536  Q
    ||||||||| ||||||||| ||||||||  ||||||||||| ||| ||| ||  ||||  ||||||||||||||||||| ||||||    
T  3967868 gtattaaatatattagtgtccgcgccaca-aaatagcgcccgctacgcgacccactccctcgccgcaccaatttttggggtggccg 3967952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 20993726 - 20993654
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| |||||||||||| | | ||   ||||||||||||||||||||| |||||||| ||||| ||||    
T  20993726 ttaagacttgtgacttttatttcaaataagga---atacttcatgaattttgagtaatgtttaaggtattttagta 20993654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 373 - 446
Target Start/End: Complemental strand, 52004576 - 52004506
Alignment:
Q  373 aagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||| |||||||||||| ||| ||||   ||||||||||| ||||||| |||||||| ||||| ||||    
T  52004576 aagacttgtgacttttatttcaaattaggaat---acttcatgaatcttgagtaatgtttaaggtattttagta 52004506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 24766061 - 24766107
Alignment:
Q  251 attgggaggatgaagaaaaagaggatgaaaaggaagagaatgaagag 297  Q
    |||||| |||||||||||||||||| ||| ||||||| |||||||||    
T  24766061 attggggggatgaagaaaaagaggaagaagaggaagaaaatgaagag 24766107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 375 - 434
Target Start/End: Complemental strand, 42872037 - 42871981
Alignment:
Q  375 gacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaa 434  Q
    |||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||    
T  42872037 gacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaa 42871981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 8e-18; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 2948250 - 2948341
Alignment:
Q  35 gttgtttatgatgacgatgatttgggttggctagatgttgaaatagcaagttatgctgctgagcccataatcaacactaggagccaagcagc 126  Q
    |||||||||||||| |||||||| |||| |||||||||||||   || |||  |||||| ||||||||| ||||||||||||||||||||||    
T  2948250 gttgtttatgatgatgatgatttaggtttgctagatgttgaagaggcgagtggtgctgccgagcccatattcaacactaggagccaagcagc 2948341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 33458116 - 33458044
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  33458116 ttaagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 33458044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 34478686 - 34478621
Alignment:
Q  373 aagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttattt 441  Q
    ||||||| || |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| |||||    
T  34478686 aagacttatgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattt 34478621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 451 - 548
Target Start/End: Original strand, 6892953 - 6893050
Alignment:
Q  451 gtattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatttttgggatggccgggctgcatttcc 548  Q
    ||||||||| ||||||||  | | ||||||||||||||||| |    ||||| |||||||| |||| |||||| ||||| |||||| || ||||||||    
T  6892953 gtattaaatttattagtggccacaccaccgaaatagcgcccgcacaacgccccgctcctgcaccgcgccaattattgggttggccgcgccgcatttcc 6893050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 1e-16; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 26278636 - 26278528
Alignment:
Q  451 gtattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatttttgggatggccgggctgcatttcccc 550  Q
    ||||||||| ||||||| |||| | |||  ||||||||||| |||||||||| ||||| ||||| |||||||| ||||| |||||| || |||||||| |    
T  26278636 gtattaaatatattagttttcgtgtcaca-aaatagcgcccgctatgcgccccgctcccgcgccacaccaattcttggggtggccgtgccgcatttccgc 26278538  T
Q  551 tttgacaaga 560  Q
    ||||||||||    
T  26278537 tttgacaaga 26278528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 372 - 446
Target Start/End: Original strand, 38567725 - 38567796
Alignment:
Q  372 taagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    ||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  38567725 taagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 38567796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 43265709 - 43265663
Alignment:
Q  251 attgggaggatgaagaaaaagaggatgaaaaggaagagaatgaagag 297  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||    
T  43265709 attggggggatgaagaaaaagaggatgaagaggaagaaaatgaagag 43265663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 453 - 523
Target Start/End: Complemental strand, 20189809 - 20189739
Alignment:
Q  453 attaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatt 523  Q
    ||||||| ||||||||| ||| ||||||||||||||||  ||| |||||| ||||| || |||| ||||||    
T  20189809 attaaatttattagtgtccgcaccaccgaaatagcgcctgctacgcgccccgctcccgcaccgcgccaatt 20189739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 375 - 450
Target Start/End: Complemental strand, 11945257 - 11945185
Alignment:
Q  375 gacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagtatttg 450  Q
    ||||||||||||||||||| | ||||||||   ||||||||||||||||||| |||||||| ||||| ||||||||    
T  11945257 gacttgtggcttttatttcgaattatgaat---acttcatgaattttgagtaatgtttaaggtattttagtatttg 11945185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 371 - 449
Target Start/End: Original strand, 2469339 - 2469414
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagtattt 449  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| |||||||    
T  2469339 ttaagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaagatattttagtattt 2469414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 41055219 - 41055147
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  41055219 ttaagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 41055147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 7199617 - 7199684
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttattt 441  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| |||||    
T  7199617 ttaagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattt 7199684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 407 - 449
Target Start/End: Original strand, 49812065 - 49812107
Alignment:
Q  407 tacttcatgaattttgagtactgtttaagttatttcagtattt 449  Q
    |||||||||||||||||||| |||||||||||||| |||||||    
T  49812065 tacttcatgaattttgagtaatgtttaagttattttagtattt 49812107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 37517200 - 37517128
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| ||||||||| || ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  37517200 ttaagacttgtgacttttattttaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 37517128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 37521416 - 37521344
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| ||||||||| || ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  37521416 ttaagacttgtgacttttattttaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 37521344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 55682394 - 55682466
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||  |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  55682394 ttaagacttgtaacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 55682466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 371 - 449
Target Start/End: Complemental strand, 374692 - 374617
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagtattt 449  Q
    ||||| |||||| |||||||||||| ||| ||||   ||||||||||||||||||| ||||||||  |||| |||||||    
T  374692 ttaaggcttgtgacttttatttcaaattaagaat---acttcatgaattttgagtaatgtttaaggaattttagtattt 374617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 406 - 450
Target Start/End: Complemental strand, 11945139 - 11945095
Alignment:
Q  406 atacttcatgaattttgagtactgtttaagttatttcagtatttg 450  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||    
T  11945139 atacttcatgaattttgagtaatgtttaaggtattttagtatttg 11945095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 479 - 558
Target Start/End: Original strand, 48197279 - 48197358
Alignment:
Q  479 cgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatttttgggatggccgggctgcatttcccctttgacaa 558  Q
    ||||||||||||||||| || ||| ||||| || ||||  ||||||||||| |||||| || |||||||| | |||||||    
T  48197279 cgaaatagcgccctctacgccccccgctcccgcaccgcgtcaatttttgggttggccgcgccgcatttccgcattgacaa 48197358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 406 - 449
Target Start/End: Original strand, 48236500 - 48236543
Alignment:
Q  406 atacttcatgaattttgagtactgtttaagttatttcagtattt 449  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||    
T  48236500 atacttcatgaattttgagtaatgtttaaggtattttagtattt 48236543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 371 - 449
Target Start/End: Original strand, 17731548 - 17731623
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagtattt 449  Q
    ||||||||||||| ||||||||||| |||||||||   |||||||| ||||||||| |||||||| ||||| |||||||    
T  17731548 ttaagacttgtggtttttatttcaaattatgaatg---cttcatgacttttgagtaatgtttaagatattttagtattt 17731623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 41992695 - 41992768
Alignment:
Q  373 aagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagtattt 449  Q
    |||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| ||||||||  |||| |||||||    
T  41992695 aagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggaattttagtattt 41992768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 452 - 536
Target Start/End: Original strand, 41992791 - 41992875
Alignment:
Q  452 tattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatttttgggatggccg 536  Q
    |||||||| ||||||||| |||| |||||||||||||||| ||| ||||||    || |||||||  ||||||||||| ||||||    
T  41992791 tattaaatatattagtgtccgcgtcaccgaaatagcgcccgctacgcgcccgcaccccgcgccgcgtcaatttttggggtggccg 41992875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 451 - 508
Target Start/End: Original strand, 34114028 - 34114085
Alignment:
Q  451 gtattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcc 508  Q
    ||||||||| ||||||||  | | ||||||||||||||||| ||| ||||||||||||    
T  34114028 gtattaaatttattagtggccacaccaccgaaatagcgcccgctacgcgccctgctcc 34114085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 37369390 - 37369318
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    ||||||||||||  ||||||||||| ||| ||||   |||||||||||||| |||| |||||||| ||||| ||||    
T  37369390 ttaagacttgtgaattttatttcaaattaggaat---acttcatgaattttaagtaatgtttaaggtattttagta 37369318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000008; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 37068170 - 37068219
Alignment:
Q  248 ttaattgggaggatgaagaaaaagaggatgaaaaggaagagaatgaagag 297  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  37068170 ttaattgggaggatgaagaaaaagaggatgaagaggaagagtttgaagag 37068219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 43614147 - 43614219
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  43614147 ttaagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 43614219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 46066938 - 46066866
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  46066938 ttaagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 46066866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 37068193 - 37068296
Alignment:
Q  256 gaggatgaagaaaaagaggatgaaaaggaagagaatgaagaggagcacatgcacaactctagtggtggaggaa--agtgatgaagattttcatgattctt 353  Q
    |||||||||||  |||||  |||| || ||||| ||||||| |||||  ||||| ||||||||||||||||||    |||||||||||||||||||| ||    
T  37068193 gaggatgaagaggaagagtttgaagagaaagaggatgaagaagagcatgtgcaccactctagtggtggaggaagcgatgatgaagattttcatgattatt 37068292  T
Q  354 gaac 357  Q
    ||||    
T  37068293 gaac 37068296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 4554328 - 4554282
Alignment:
Q  251 attgggaggatgaagaaaaagaggatgaaaaggaagagaatgaagag 297  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||    
T  4554328 attggggggatgaagaaaaagaggatgaagaggaagaaaatgaagag 4554282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 11591831 - 11591903
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    ||||||||| || |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  11591831 ttaagacttatgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 11591903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 33516184 - 33516112
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||  |||||||| ||||| ||||    
T  33516184 ttaagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtgatgtttaaggtattttagta 33516112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 48827191 - 48827258
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttattt 441  Q
    |||||||||||| |||||||||||| ||| ||||   |||| |||||||||||||| |||||||| |||||    
T  48827191 ttaagacttgtgacttttatttcaaattaggaat---acttaatgaattttgagtaatgtttaaggtattt 48827258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 447
Target Start/End: Original strand, 37068411 - 37068484
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagtat 447  Q
    ||||||||| ||| ||||||||||| ||||||   ||||||||||| |||||| || |||||||| ||||| |||||    
T  37068411 ttaagacttatggtttttatttcaaattatga---atacttcatgatttttgattaatgtttaaggtattttagtat 37068484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 453 - 523
Target Start/End: Complemental strand, 44274321 - 44274251
Alignment:
Q  453 attaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatt 523  Q
    ||||||| ||||||||| ||| ||||||||||||||||  ||| |||||| ||||| || |||| ||||||    
T  44274321 attaaatttattagtgtccgcaccaccgaaatagcgcctgctacgcgccccgctcccgcaccgcgccaatt 44274251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 502
Target Start/End: Complemental strand, 46066839 - 46066789
Alignment:
Q  452 tattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccc 502  Q
    |||||||| ||||||||| |||| |||||||||||||||| ||| ||||||    
T  46066839 tattaaatatattagtgtccgcgtcaccgaaatagcgcccgctacgcgccc 46066789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000008; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 39759741 - 39759813
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  39759741 ttaagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 39759813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 43823216 - 43823144
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagta 446  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||| ||||| ||||    
T  43823216 ttaagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaaggtattttagta 43823144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 9689007 - 9688935
Alignment:
Q  451 gtattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatt 523  Q
    ||||||||| |||||||| |||| ||||| ||||||||||| ||| |||||| |||||||| |||| ||||||    
T  9689007 gtattaaatttattagtggtcgcaccaccaaaatagcgcccgctacgcgccccgctcctgcaccgcgccaatt 9688935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 452 - 558
Target Start/End: Complemental strand, 53286038 - 53285932
Alignment:
Q  452 tattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatttttgggatggccgggctgcatttcccct 551  Q
    |||||||| ||||||||| ||||| ||||||||||||||| ||| ||| ||   ||| |||||||  ||||||| |||   |||||||||||||||| |     
T  53286038 tattaaatatattagtgtccgcgcaaccgaaatagcgcccgctacgcgtccgcatcccgcgccgcgtcaattttaggggctgccgggctgcatttccgca 53285939  T
Q  552 ttgacaa 558  Q
    |||||||    
T  53285938 ttgacaa 53285932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 9444985 - 9444941
Alignment:
Q  32 gatgttgtttatgatgacgatgatttgggttggctagatgttgaa 76  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||    
T  9444985 gatgttgtttatgatgatgatgatttaggttggttagatgttgaa 9444941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 371 - 449
Target Start/End: Complemental strand, 53286140 - 53286065
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagtattt 449  Q
    ||||||||||||  ||||||||||| ||| ||||   |||| |||||||||||||| |||||||| ||||| |||||||    
T  53286140 ttaagacttgtgatttttatttcaaattaagaat---acttaatgaattttgagtaatgtttaaggtattttagtattt 53286065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 502
Target Start/End: Original strand, 39759841 - 39759891
Alignment:
Q  452 tattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccc 502  Q
    |||||||| ||||||||| |||| |||||||||||||||| ||||| ||||    
T  39759841 tattaaatatattagtgtccgcgtcaccgaaatagcgcccgctatgtgccc 39759891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000007; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 373 - 435
Target Start/End: Complemental strand, 3288240 - 3288181
Alignment:
Q  373 aagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaag 435  Q
    |||||||||| |||||||||||| ||| ||||   ||||||||||||||||||| ||||||||    
T  3288240 aagacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaag 3288181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 371 - 449
Target Start/End: Original strand, 11843614 - 11843689
Alignment:
Q  371 ttaagacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaagttatttcagtattt 449  Q
    ||||||||||||  ||||||||||| ||| ||||   |||| |||||||||||||| |||||||| ||||| |||||||    
T  11843614 ttaagacttgtgaattttatttcaaattaagaat---acttaatgaattttgagtaatgtttaaggtattttagtattt 11843689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 451 - 536
Target Start/End: Complemental strand, 8366027 - 8365942
Alignment:
Q  451 gtattaaatgtattagtgttcgcgccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatttttgggatggccg 536  Q
    ||||||||| ||||||||  | | ||||||||||||||||| |||  ||||||||||| || |||| |||||| || || ||||||    
T  8366027 gtattaaatttattagtggccacaccaccgaaatagcgcccgctacacgccctgctcccgcaccgcgccaattattaggttggccg 8365942  T

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Target: scaffold0368 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 8551 - 8607
Alignment:
Q  375 gacttgtggcttttatttcaacttatgaatgatacttcatgaattttgagtactgtttaa 434  Q
    |||||||| |||||||||||| ||| ||||   ||||||||||||||||||| |||||||    
T  8551 gacttgtgacttttatttcaaattaggaat---acttcatgaattttgagtaatgtttaa 8607  T

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Target: scaffold0311 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 475 - 536
Target Start/End: Original strand, 1532 - 1593
Alignment:
Q  475 ccaccgaaatagcgccctctatgcgccctgctcctgcgccgcaccaatttttgggatggccg 536  Q
    ||||||||||||||||| |||  | ||| |||||||| ||||||||||| ||||| ||||||    
T  1532 ccaccgaaatagcgcccgctacacaccccgctcctgcaccgcaccaattattgggttggccg 1593  T

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