View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5092_low_3 (Length: 461)

Name: NF5092_low_3
Description: NF5092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5092_low_3
NF5092_low_3
[»] chr8 (44 HSPs)
chr8 (60-442)||(42600584-42600967)
chr8 (60-442)||(10917194-10917575)
chr8 (72-443)||(23798178-23798549)
chr8 (69-444)||(23606546-23606912)
chr8 (184-442)||(45475745-45476001)
chr8 (184-439)||(13534609-13534861)
chr8 (184-439)||(13624149-13624401)
chr8 (184-442)||(41879109-41879364)
chr8 (208-442)||(2952137-2952372)
chr8 (208-439)||(30883281-30883512)
chr8 (208-442)||(3048435-3048668)
chr8 (208-356)||(5860748-5860895)
chr8 (255-442)||(37430076-37430261)
chr8 (256-346)||(7944536-7944624)
chr8 (256-346)||(8102913-8103001)
chr8 (256-346)||(11290185-11290273)
chr8 (371-442)||(20003728-20003799)
chr8 (256-353)||(15078759-15078854)
chr8 (66-126)||(20003876-20003936)
chr8 (66-125)||(2952473-2952532)
chr8 (66-125)||(5860996-5861055)
chr8 (256-338)||(5942697-5942777)
chr8 (256-354)||(15167421-15167517)
chr8 (258-348)||(34789874-34789962)
chr8 (209-249)||(25561640-25561680)
chr8 (279-354)||(30674409-30674482)
chr8 (256-354)||(5973113-5973209)
chr8 (256-354)||(8646207-8646302)
chr8 (66-125)||(30883116-30883175)
chr8 (256-354)||(39332411-39332507)
chr8 (71-125)||(3048774-3048828)
chr8 (211-249)||(8102845-8102883)
chr8 (256-348)||(5721560-5721650)
chr8 (256-441)||(41677092-41677276)
chr8 (209-249)||(8646129-8646169)
chr8 (209-249)||(15167547-15167587)
chr8 (209-249)||(41677307-41677347)
chr8 (70-126)||(45472201-45472257)
chr8 (256-354)||(14509989-14510084)
chr8 (58-108)||(45294597-45294647)
chr8 (209-246)||(11290113-11290150)
chr8 (60-109)||(15270142-15270191)
chr8 (209-249)||(7944656-7944696)
chr8 (209-249)||(15078689-15078729)
[»] chr2 (49 HSPs)
chr2 (51-445)||(27506656-27507050)
chr2 (60-444)||(24410236-24410625)
chr2 (60-442)||(26715931-26716313)
chr2 (60-439)||(10762488-10762865)
chr2 (60-442)||(9045832-9046213)
chr2 (184-444)||(29939779-29940037)
chr2 (208-443)||(4505845-4506079)
chr2 (81-259)||(8327488-8327669)
chr2 (208-442)||(3155168-3155401)
chr2 (208-442)||(8906996-8907230)
chr2 (218-439)||(6964968-6965186)
chr2 (208-442)||(12337365-12337599)
chr2 (314-443)||(8327674-8327802)
chr2 (282-438)||(40636164-40636317)
chr2 (240-443)||(7162767-7162968)
chr2 (240-442)||(3952989-3953188)
chr2 (276-439)||(34693995-34694155)
chr2 (276-439)||(34716407-34716567)
chr2 (256-354)||(16097008-16097104)
chr2 (66-125)||(4505685-4505744)
chr2 (261-354)||(24035551-24035642)
chr2 (282-436)||(5952642-5952791)
chr2 (279-354)||(13800550-13800624)
chr2 (66-125)||(3155009-3155068)
chr2 (66-125)||(6964798-6964857)
chr2 (256-354)||(38400798-38400894)
chr2 (66-126)||(7162683-7162743)
chr2 (66-126)||(12337689-12337749)
chr2 (329-442)||(1396617-1396730)
chr2 (71-126)||(3952910-3952965)
chr2 (256-354)||(28425716-28425812)
chr2 (66-125)||(34693153-34693212)
chr2 (66-125)||(34715565-34715624)
chr2 (209-249)||(10252335-10252375)
chr2 (264-335)||(12134065-12134134)
chr2 (209-249)||(24035679-24035719)
chr2 (209-249)||(29694312-29694352)
chr2 (314-354)||(42029201-42029241)
chr2 (256-354)||(21665706-21665802)
chr2 (66-112)||(8907343-8907389)
chr2 (66-112)||(40635968-40636014)
chr2 (60-109)||(21190943-21190992)
chr2 (60-109)||(30175519-30175568)
chr2 (256-309)||(37182670-37182723)
chr2 (60-108)||(52968-53016)
chr2 (209-249)||(11912892-11912932)
chr2 (209-249)||(12134174-12134214)
chr2 (209-249)||(37182598-37182638)
chr2 (209-249)||(38400726-38400766)
[»] chr6 (35 HSPs)
chr6 (60-434)||(235151-235525)
chr6 (60-442)||(17353759-17354142)
chr6 (64-444)||(27788606-27788984)
chr6 (60-444)||(20711636-20712018)
chr6 (60-432)||(28075588-28075964)
chr6 (60-436)||(19986966-19987330)
chr6 (208-442)||(13727317-13727550)
chr6 (169-438)||(34397773-34398039)
chr6 (208-443)||(21280500-21280734)
chr6 (208-442)||(21479449-21479683)
chr6 (184-356)||(19737696-19737867)
chr6 (208-441)||(33774072-33774305)
chr6 (240-442)||(24710914-24711118)
chr6 (240-442)||(30832443-30832643)
chr6 (278-442)||(27314097-27314259)
chr6 (261-440)||(1155767-1155946)
chr6 (66-125)||(13727650-13727709)
chr6 (66-112)||(19741237-19741283)
chr6 (66-112)||(21280339-21280385)
chr6 (66-112)||(27314778-27314824)
chr6 (256-348)||(21183687-21183777)
chr6 (267-354)||(6159453-6159538)
chr6 (66-126)||(23070889-23070949)
chr6 (256-354)||(2477590-2477686)
chr6 (66-125)||(21479290-21479349)
chr6 (63-125)||(11081684-11081746)
chr6 (66-126)||(12083640-12083700)
chr6 (66-126)||(24711142-24711202)
chr6 (60-107)||(11574447-11574494)
chr6 (66-125)||(33773906-33773964)
chr6 (256-353)||(20611794-20611889)
chr6 (66-112)||(27579089-27579135)
chr6 (76-126)||(30832667-30832717)
chr6 (261-337)||(4036957-4037031)
chr6 (209-249)||(30121706-30121746)
[»] chr5 (53 HSPs)
chr5 (60-442)||(16198709-16199092)
chr5 (60-444)||(38869277-38869659)
chr5 (60-445)||(27923885-27924270)
chr5 (79-442)||(9364113-9364476)
chr5 (60-442)||(7670728-7671118)
chr5 (60-358)||(40389535-40389831)
chr5 (72-442)||(16799240-16799610)
chr5 (176-441)||(28822253-28822522)
chr5 (184-444)||(27078939-27079199)
chr5 (187-444)||(16591988-16592243)
chr5 (208-434)||(34756289-34756514)
chr5 (184-439)||(30854258-30854511)
chr5 (184-444)||(22986471-22986719)
chr5 (240-438)||(19523183-19523380)
chr5 (240-442)||(36187795-36187995)
chr5 (240-437)||(2274874-2275070)
chr5 (261-442)||(31194528-31194705)
chr5 (240-442)||(15480006-15480205)
chr5 (253-356)||(23284063-23284164)
chr5 (277-428)||(7338021-7338170)
chr5 (261-444)||(31881346-31881527)
chr5 (261-354)||(36868879-36868970)
chr5 (66-126)||(15480229-15480289)
chr5 (66-126)||(19523099-19523159)
chr5 (371-442)||(23283943-23284014)
chr5 (66-112)||(31881604-31881650)
chr5 (261-353)||(24395745-24395835)
chr5 (377-434)||(40389461-40389518)
chr5 (264-339)||(10543682-10543755)
chr5 (66-126)||(36188019-36188079)
chr5 (256-354)||(14318388-14318484)
chr5 (70-125)||(34756615-34756670)
chr5 (261-354)||(2024645-2024736)
chr5 (256-353)||(2530901-2530996)
chr5 (261-353)||(26718953-26719043)
chr5 (261-353)||(26988697-26988787)
chr5 (209-249)||(11242449-11242489)
chr5 (209-249)||(15639575-15639615)
chr5 (71-107)||(28822576-28822612)
chr5 (209-249)||(34425832-34425872)
chr5 (256-354)||(1366529-1366625)
chr5 (66-112)||(22987481-22987528)
chr5 (256-346)||(33037781-33037869)
chr5 (256-354)||(34425904-34426000)
chr5 (256-346)||(40794338-40794426)
chr5 (70-112)||(2274808-2274850)
chr5 (66-108)||(16592863-16592905)
chr5 (66-108)||(30853272-30853314)
chr5 (314-354)||(606211-606251)
chr5 (209-249)||(2024771-2024811)
chr5 (209-249)||(7079561-7079601)
chr5 (60-108)||(8433593-8433641)
chr5 (209-249)||(40794456-40794496)
[»] chr1 (51 HSPs)
chr1 (60-444)||(13913396-13913782)
chr1 (59-444)||(40501705-40502091)
chr1 (60-443)||(17168769-17169152)
chr1 (76-442)||(19955547-19955912)
chr1 (60-442)||(9172940-9173321)
chr1 (59-442)||(1366797-1367178)
chr1 (72-360)||(27559459-27559751)
chr1 (60-360)||(44895467-44895760)
chr1 (72-442)||(51607358-51607727)
chr1 (184-443)||(23185366-23185623)
chr1 (208-442)||(9180922-9181155)
chr1 (184-444)||(4971534-4971792)
chr1 (191-442)||(5316626-5316875)
chr1 (208-443)||(44655704-44655937)
chr1 (224-442)||(5027528-5027746)
chr1 (184-439)||(50881369-50881621)
chr1 (240-442)||(14146295-14146495)
chr1 (240-442)||(6771786-6771989)
chr1 (240-442)||(3406413-3406614)
chr1 (240-442)||(3440206-3440407)
chr1 (208-442)||(27906646-27906867)
chr1 (265-442)||(21740852-21741029)
chr1 (250-436)||(16140061-16140244)
chr1 (240-425)||(41697072-41697255)
chr1 (279-442)||(22865378-22865538)
chr1 (277-442)||(6889644-6889805)
chr1 (277-442)||(6891490-6891651)
chr1 (256-354)||(38547041-38547137)
chr1 (66-126)||(14146211-14146271)
chr1 (59-126)||(23181710-23181777)
chr1 (66-125)||(44655545-44655604)
chr1 (259-348)||(38853537-38853624)
chr1 (66-112)||(41697293-41697339)
chr1 (66-126)||(6888475-6888535)
chr1 (256-354)||(39134727-39134824)
chr1 (66-125)||(27906949-27907008)
chr1 (256-354)||(45758506-45758602)
chr1 (261-338)||(5533329-5533404)
chr1 (68-126)||(6771704-6771762)
chr1 (72-109)||(5027991-5028028)
chr1 (256-346)||(26803960-26804045)
chr1 (256-360)||(33170771-33170873)
chr1 (371-428)||(34247151-34247208)
chr1 (66-126)||(3406329-3406389)
chr1 (66-126)||(3440431-3440491)
chr1 (209-249)||(39134856-39134896)
chr1 (66-106)||(50880574-50880614)
chr1 (256-338)||(43235791-43235871)
chr1 (66-112)||(16139966-16140012)
chr1 (59-108)||(10912112-10912161)
chr1 (72-108)||(12037601-12037637)
[»] chr7 (43 HSPs)
chr7 (57-442)||(20091197-20091582)
chr7 (58-442)||(48983756-48984145)
chr7 (60-442)||(10329327-10329709)
chr7 (60-442)||(47984885-47985268)
chr7 (72-444)||(23550986-23551359)
chr7 (59-442)||(24525599-24525985)
chr7 (60-442)||(19691897-19692279)
chr7 (60-442)||(38414793-38415174)
chr7 (194-442)||(25010371-25010611)
chr7 (191-439)||(8171460-8171706)
chr7 (169-440)||(8239598-8239869)
chr7 (208-442)||(18776683-18776916)
chr7 (220-442)||(29077184-29077404)
chr7 (240-442)||(12596207-12596405)
chr7 (277-442)||(26254015-26254178)
chr7 (240-348)||(10955468-10955575)
chr7 (261-442)||(28749716-28749895)
chr7 (61-160)||(25010254-25010354)
chr7 (278-441)||(33162257-33162418)
chr7 (261-347)||(9021812-9021896)
chr7 (267-354)||(6765686-6765771)
chr7 (256-354)||(2611267-2611363)
chr7 (261-353)||(23859079-23859169)
chr7 (66-112)||(12596443-12596489)
chr7 (209-249)||(7398380-7398420)
chr7 (209-249)||(17800354-17800394)
chr7 (66-126)||(28749587-28749647)
chr7 (256-354)||(7398452-7398548)
chr7 (66-125)||(18777019-18777078)
chr7 (256-353)||(36891579-36891674)
chr7 (371-428)||(40357311-40357368)
chr7 (267-354)||(23744808-23744893)
chr7 (209-249)||(23859002-23859042)
chr7 (376-442)||(10955605-10955671)
chr7 (256-353)||(12981327-12981422)
chr7 (261-354)||(36902929-36903020)
chr7 (60-109)||(9939442-9939491)
chr7 (60-109)||(10027618-10027667)
chr7 (66-126)||(10955384-10955444)
chr7 (279-354)||(18201161-18201234)
chr7 (209-249)||(26917815-26917855)
chr7 (314-354)||(27237428-27237468)
chr7 (209-249)||(27237556-27237596)
[»] chr3 (57 HSPs)
chr3 (60-443)||(44708282-44708665)
chr3 (60-442)||(50939152-50939534)
chr3 (58-442)||(53506802-53507185)
chr3 (60-442)||(34290554-34290940)
chr3 (60-442)||(43207157-43207540)
chr3 (70-442)||(54407073-54407447)
chr3 (60-348)||(9878699-9878985)
chr3 (135-443)||(37168248-37168556)
chr3 (58-436)||(48156940-48157310)
chr3 (184-443)||(8073256-8073512)
chr3 (184-441)||(3953816-3954071)
chr3 (208-443)||(54619120-54619354)
chr3 (208-443)||(38681010-38681244)
chr3 (208-442)||(36715942-36716176)
chr3 (208-442)||(27078486-27078720)
chr3 (208-442)||(27084283-27084517)
chr3 (240-442)||(47467671-47467872)
chr3 (240-442)||(21582758-21582960)
chr3 (240-444)||(53149230-53149433)
chr3 (201-428)||(18372427-18372656)
chr3 (254-443)||(42098803-42098990)
chr3 (251-442)||(50258542-50258731)
chr3 (261-439)||(36605974-36606149)
chr3 (208-325)||(29620423-29620539)
chr3 (371-442)||(48720429-48720500)
chr3 (380-442)||(29620364-29620426)
chr3 (77-126)||(48720530-48720579)
chr3 (66-126)||(50258734-50258794)
chr3 (279-353)||(8420353-8420425)
chr3 (66-125)||(36716276-36716335)
chr3 (66-125)||(38681348-38681407)
chr3 (66-112)||(3954866-3954912)
chr3 (68-125)||(54619454-54619511)
chr3 (279-354)||(26279569-26279642)
chr3 (258-353)||(28689368-28689461)
chr3 (209-249)||(29598040-29598080)
chr3 (209-249)||(49393023-49393063)
chr3 (259-354)||(49393097-49393189)
chr3 (70-125)||(27078819-27078874)
chr3 (70-125)||(27084616-27084671)
chr3 (279-353)||(32319162-32319234)
chr3 (256-354)||(54574833-54574929)
chr3 (57-107)||(29620618-29620668)
chr3 (256-348)||(789940-790030)
chr3 (66-126)||(13795193-13795253)
chr3 (66-126)||(42098704-42098764)
chr3 (209-249)||(52374590-52374630)
chr3 (265-354)||(25855435-25855521)
chr3 (66-108)||(53149475-53149517)
chr3 (76-125)||(36605862-36605911)
chr3 (69-109)||(1148371-1148411)
chr3 (209-249)||(8420258-8420298)
chr3 (66-126)||(21582674-21582734)
chr3 (72-108)||(25373642-25373678)
chr3 (65-109)||(32741103-32741147)
chr3 (209-249)||(42453344-42453384)
chr3 (66-126)||(47467588-47467647)
[»] chr4 (75 HSPs)
chr4 (63-442)||(54083160-54083541)
chr4 (58-443)||(37777139-37777527)
chr4 (71-442)||(34027399-34027768)
chr4 (70-442)||(32128402-32128774)
chr4 (60-436)||(38352189-38352554)
chr4 (59-443)||(19498312-19498692)
chr4 (76-442)||(40089340-40089714)
chr4 (72-442)||(16844839-16845210)
chr4 (71-442)||(16882313-16882682)
chr4 (69-360)||(24969251-24969535)
chr4 (60-442)||(2790659-2791040)
chr4 (169-431)||(43455460-43455720)
chr4 (184-443)||(47128920-47129177)
chr4 (191-442)||(34768492-34768741)
chr4 (184-442)||(48209173-48209436)
chr4 (184-442)||(10978833-10979092)
chr4 (250-442)||(54780777-54780968)
chr4 (184-428)||(35465040-35465281)
chr4 (208-428)||(38209522-38209741)
chr4 (184-444)||(35779243-35779499)
chr4 (184-442)||(10428116-10428379)
chr4 (184-348)||(13460140-13460303)
chr4 (240-442)||(32915374-32915575)
chr4 (208-442)||(55255226-55255447)
chr4 (184-309)||(23509846-23509972)
chr4 (240-442)||(37514648-37514848)
chr4 (240-442)||(5128758-5128960)
chr4 (240-443)||(1105521-1105722)
chr4 (282-442)||(17679432-17679589)
chr4 (277-442)||(16922245-16922409)
chr4 (256-340)||(4167910-4167992)
chr4 (372-443)||(24969716-24969787)
chr4 (256-354)||(52468292-52468388)
chr4 (66-126)||(10431442-10431502)
chr4 (256-346)||(24396940-24397028)
chr4 (256-354)||(36118463-36118559)
chr4 (278-426)||(51964736-51964884)
chr4 (66-125)||(55255086-55255145)
chr4 (314-444)||(23508425-23508556)
chr4 (77-126)||(35463958-35464007)
chr4 (262-354)||(36178684-36178774)
chr4 (292-356)||(51691918-51691980)
chr4 (60-109)||(54779441-54779490)
chr4 (66-126)||(17679223-17679283)
chr4 (279-354)||(39655259-39655332)
chr4 (66-126)||(45560704-45560764)
chr4 (66-126)||(47127987-47128047)
chr4 (256-354)||(27112036-27112132)
chr4 (256-338)||(37744931-37745011)
chr4 (70-112)||(5128997-5129039)
chr4 (66-112)||(32915303-32915349)
chr4 (66-108)||(37514564-37514606)
chr4 (68-126)||(48208458-48208516)
chr4 (315-356)||(9578667-9578708)
chr4 (60-109)||(35780573-35780622)
chr4 (208-249)||(36118590-36118631)
chr4 (279-347)||(40217261-40217327)
chr4 (74-126)||(1105445-1105497)
chr4 (209-249)||(2135451-2135491)
chr4 (279-346)||(29425187-29425252)
chr4 (209-249)||(37746854-37746894)
chr4 (209-249)||(39329525-39329565)
chr4 (264-354)||(36362876-36362964)
chr4 (59-109)||(25887301-25887351)
chr4 (256-348)||(2135332-2135422)
chr4 (60-109)||(29690950-29690999)
chr4 (58-107)||(35042594-35042643)
chr4 (76-125)||(38209842-38209891)
chr4 (60-109)||(48694710-48694759)
chr4 (70-126)||(13459794-13459850)
chr4 (209-249)||(15735030-15735070)
chr4 (69-109)||(27596656-27596696)
chr4 (209-249)||(30507205-30507245)
chr4 (209-249)||(36178607-36178647)
chr4 (209-249)||(40217164-40217204)
[»] scaffold0039 (2 HSPs)
scaffold0039 (177-442)||(106459-106723)
scaffold0039 (60-126)||(106379-106445)
[»] scaffold0070 (2 HSPs)
scaffold0070 (184-442)||(1271-1527)
scaffold0070 (66-112)||(1017-1063)
[»] scaffold1590 (1 HSPs)
scaffold1590 (262-354)||(264-354)
[»] scaffold0027 (1 HSPs)
scaffold0027 (60-160)||(4149-4250)
[»] scaffold0012 (1 HSPs)
scaffold0012 (256-353)||(206496-206591)
[»] scaffold0018 (2 HSPs)
scaffold0018 (256-354)||(173516-173612)
scaffold0018 (209-249)||(173644-173684)
[»] scaffold1320 (2 HSPs)
scaffold1320 (256-353)||(1355-1450)
scaffold1320 (209-249)||(1285-1325)
[»] scaffold0097 (1 HSPs)
scaffold0097 (256-359)||(38926-39027)
[»] scaffold0001 (3 HSPs)
scaffold0001 (371-442)||(183173-183244)
scaffold0001 (240-305)||(181903-181969)
scaffold0001 (56-105)||(181431-181480)
[»] scaffold0182 (1 HSPs)
scaffold0182 (279-348)||(24005-24072)
[»] scaffold0022 (4 HSPs)
scaffold0022 (256-338)||(40086-40166)
scaffold0022 (256-338)||(138146-138226)
scaffold0022 (209-249)||(40012-40052)
scaffold0022 (209-249)||(138072-138112)
[»] scaffold0007 (2 HSPs)
scaffold0007 (261-354)||(230865-230956)
scaffold0007 (209-249)||(230993-231033)
[»] scaffold0369 (1 HSPs)
scaffold0369 (60-109)||(14373-14422)
[»] scaffold0227 (1 HSPs)
scaffold0227 (256-309)||(16028-16081)
[»] scaffold0003 (1 HSPs)
scaffold0003 (279-334)||(351360-351413)


Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 60 - 442
Target Start/End: Original strand, 42600584 - 42600967
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||    
T  42600584 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaattttatttttaatacccactagtactactgccc 42600683  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  42600684 tccaaaaaaaatttaataaccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcttcttgcttttggtgttaggtgggg 42600783  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||||||||| |||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  42600784 gttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatata--cggcaccttatatttatcttttaaaaaatataaatagatcattgct 42600881  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||           ||||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  42600882 tttttaaaaaaaaaaacgttttgattttatcactgacctcttttcattttcagagccgagcctccgaattcttagggacggccctg 42600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 60 - 442
Target Start/End: Original strand, 10917194 - 10917575
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||         ||||||||||||||||||||| ||    
T  10917194 caggcccgtccttgagggggtgcaaacagctcaacagagctgggcctccctcactcatgggccacaatttttttttaatacccactagtactactgctct 10917293  T
Q  159 ccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
     |        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  10917294 tcaaaaaaaatttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcatcttgcttttggtgttaggtggggg 10917393  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctt 357  Q
    || |||||||||| ||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  10917394 ttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagatcattg-tt 10917490  T
Q  358 tttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||          |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||| ||||||    
T  10917491 ttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaaggacagccctg 10917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 72 - 443
Target Start/End: Complemental strand, 23798549 - 23798178
Alignment:
Q  72 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccctccnnnnnnnnt 169  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||          |||||||||||||| |||||||||||        |    
T  23798549 tgagggggtgcgaacagctcaacaaagctgggcctccctcagtcatgggcctcaaatttttttttaatacccactagtattactgccctccaattgtt-t 23798451  T
Q  170 ttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgta 268  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  23798450 ttaatacccccaaccattttctgtccccttgttttagtcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgta 23798351  T
Q  269 tacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnn 368  Q
    |||||| ||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||            
T  23798350 tacggtagtcattttcacttttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgctctttaaaaaaaa 23798253  T
Q  369 nntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
      |||||||||||||||||| ||  |||||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  23798252 tatacgttttgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttagggacggccctga 23798178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 69 - 444
Target Start/End: Complemental strand, 23606912 - 23606546
Alignment:
Q  69 ccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccctccnnnnnn 166  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||          |||||||||||||| |||||||||||          
T  23606912 ccctgagggggtgcaaacagctcaacagagttgggcctccctcagtcatgggcctcaaattttcttttaatacccactagtaatactgccctccaatttt 23606813  T
Q  167 nntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcat 265  Q
      ||||||||||||||        |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  23606812 t-tttaatacccccag--------tgtccccttgttttagtcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcat 23606722  T
Q  266 gtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnn 365  Q
    ||||||||| |||||||| |||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||         
T  23606721 gtatacggtagtcatttttacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt-taaa 23606625  T
Q  366 nnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
         ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  23606624 aaaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccctgat 23606546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 184 - 442
Target Start/End: Original strand, 45475745 - 45476001
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |||||||    
T  45475745 cattttctgtcctcttgttttagccttttaggcctattagaattagttcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattt 45475844  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||| ||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          ||||||||||||    
T  45475845 tcacctatgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgttttgatt 45475941  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||  |||||||||||| | |||| ||||||||||||||| ||||| |||||||    
T  45475942 ttatcactggcctcttttcattccccgagccgagcctccgaattctcagggatggccctg 45476001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 184 - 439
Target Start/End: Complemental strand, 13534861 - 13534609
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||||||||  |||||||||||| | |||||| |||||||||| |||||||||| |||||||||||||| |||||||    
T  13534861 cattttctgtcctcttgttttagccttttaggattattagaattagtttctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattt 13534762  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||| ||||||||| |||||||||  ||||| ||| |||||||||||||||||||||||||||| ||||||| |||          ||||||||||||    
T  13534761 tcacctctgggtgtaccgcatatata--cggca-cttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgttttgatt 13534666  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggcc 439  Q
    |||||||||  |||||||||||| |||||| ||||||||||||| | ||||||||||    
T  13534665 ttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13534609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 184 - 439
Target Start/End: Complemental strand, 13624401 - 13624149
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||||||||  |||||||||||| | |||||| |||||||||| |||||||||| |||||||||||||| |||||||    
T  13624401 cattttctgtcctcttgttttagccttttaggattattagaattagtttctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattt 13624302  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||| ||||||||| |||||||||  ||||| ||| |||||||||||||||||||||||||||| ||||||| |||          ||||||||||||    
T  13624301 tcacctctgggtgtaccgcatatata--cggca-cttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgttttgatt 13624206  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggcc 439  Q
    |||||||||  |||||||||||| |||||| ||||||||||||| | ||||||||||    
T  13624205 ttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13624149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 184 - 442
Target Start/End: Original strand, 41879109 - 41879364
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||||||||| |||| |||||||    
T  41879109 cattttctgtcctcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggtttctcatgtattcggtagtcattt 41879208  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||||||| ||||| |||||||||  ||| ||||| |||||||||||||||||||||||||||| ||||| | |||          |||||||| |||    
T  41879209 tcacctttggatgtaccgcatatata--cggtaccttgtatttatcttttaaaaaatataaatagaacattgttcttt--taaaaaaatacgttttaatt 41879304  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||||||   |||||||||||| |||||| |||||| |||||||| |||||||||||||    
T  41879305 ttatcactaacctcttttcattcccagagccgagccttcgaattctcagggacggccctg 41879364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 2952372 - 2952137
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||||| || ||||||||| |||||||    
T  2952372 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatata 2952273  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattg--ctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcatt 404  Q
    ||  |||||| || |||||||||||||||||||||||||||| |||||  ||||||          || ||||||||||||||||||  |||||||||||    
T  2952272 ta--cggcactttgtatttatcttttaaaaaatataaatagaacattgctctttttaaaaaaaaattatgttttgattttatcactggcctcttttcatt 2952175  T
Q  405 ctcagagctgagcctccgaattcttagggacggccctg 442  Q
      |||||| ||||||||||||||| |||||||||||||    
T  2952174 tccagagccgagcctccgaattctcagggacggccctg 2952137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 208 - 439
Target Start/End: Original strand, 30883281 - 30883512
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  30883281 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 30883380  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattc 405  Q
    ||  |||||| || |||||||||||||||||||||||||||| ||||||| ||||          || ||||||||||||||||||  |||||||||||     
T  30883381 ta--cggcacattgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcattt 30883478  T
Q  406 tcagagctgagcctccgaattcttagggacggcc 439  Q
     |||||| ||||||| ||||||| ||||||||||    
T  30883479 ccagagccgagcctctgaattctcagggacggcc 30883512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 3048668 - 3048435
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| ||| |||||||||| |||||||||| || | ||||||| |||||||    
T  3048668 cttttaggattattagaattagttcctcttgattttggtgttaggtgagggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatata 3048569  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    |||  |||||||| |||||||||||||||||||||||||||   |||||| |||          || ||||||||||||||||||  |||||||||||      
T  3048568 tac--ggcaccttgtatttatcttttaaaaaatataaatagtatattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttc 3048471  T
Q  407 cagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||| ||||||||||||||| || ||||||||||    
T  3048470 cagagccgagcctccgaattctcagagacggccctg 3048435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 5860895 - 5860748
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| ||| ||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||    
T  5860895 cttttaggattattagaattagttcctcttgattttggtgttaggttggggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatata 5860796  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||  ||||||||| |||||||||||||||||||||||||||| |||||||    
T  5860795 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattgct 5860748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 255 - 442
Target Start/End: Complemental strand, 37430261 - 37430076
Alignment:
Q  255 gggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||| |||||||||||||| |||||||| |||| | ||||||  ||||||||||  |||||||| |||||||||||||||||||||||||||| ||| |    
T  37430261 gggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatac--ggcaccttgtatttatcttttaaaaaatataaatagaacatcg 37430164  T
Q  355 ctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    || |||           ||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  37430163 ctcttttaaaaaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 37430076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 7944624 - 7944536
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaata 346  Q
    |||| |||||||||||||| || ||||||||||||||||||||  ||||||||  ||||||||| ||||||| ||||||||||| ||||||    
T  7944624 ggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatata--cggcaccttgtatttattttttaaaaaatttaaata 7944536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 8102913 - 8103001
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaata 346  Q
    |||| ||||||||||||||  | |||||||||||| ||||||| |||||||||  | ||||||| ||||||||||||||||||| ||||||    
T  8102913 ggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatata--ctgcaccttgtatttatcttttaaaaaatttaaata 8103001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 11290185 - 11290273
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaata 346  Q
    |||| |||||||||||||| || ||||||||||||| ||||||  ||||||||  || |||||| ||||||||||||||||||| ||||||    
T  11290185 ggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatata--cgacaccttgtatttatcttttaaaaaatttaaata 11290273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 371 - 442
Target Start/End: Complemental strand, 20003799 - 20003728
Alignment:
Q  371 tacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||||||||||||||  |||||||||||| | |||| |||||||| |||||| |||||||||||||    
T  20003799 tacgttttgattttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggccctg 20003728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 15078759 - 15078854
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||| |||||||||||| | || |||||||| ||||||||||  ||||||||||   ||||||||||||||||||||||||| | |||||||| ||||    
T  15078759 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatataca--gcaccttatatttatcttttaaaaattttaaatagaacatt 15078854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 20003936 - 20003876
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  20003936 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 20003876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 2952532 - 2952473
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  2952532 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 2952473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 5861055 - 5860996
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  5861055 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 5860996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 5942697 - 5942777
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||| |||||||||||||| || |||||||||||||||||||| ||| |||||  || || ||| ||||||||||||||||||    
T  5942697 ggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatata--cgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 15167517 - 15167421
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||| | || |||||||| ||||||||||  ||||||||||    ||| |||||||||||||||||||||| |||||||| |||||    
T  15167517 ggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaa--cactttatatttatcttttaaaaaatttaaatagaacattg 15167421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 34789962 - 34789874
Alignment:
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaataga 348  Q
    ||||||||||||||||| || ||||||||||||||||||||  ||||||||  || || ||| |||||||||||||| | || ||||||||    
T  34789962 tttctcatgtatacggtagtgattttcacctttgggtgtacaacatatata--cgacatcttgtatttatcttttaagagatttaaataga 34789874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 25561680 - 25561640
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  25561680 ttttaggcctattagaattgggtcctcttgcttttggtgtt 25561640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 30674482 - 30674409
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||||||||||| |||||  ||||||||||  | ||||||||||||||||||||||| || |||||||| |||||    
T  30674482 attttcacctttgagtgtatcgcatatatac--gacaccttatatttatcttttaaaacatttaaatagaacattg 30674409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 5973209 - 5973113
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| ||| ||||||||||  | ||||||| || |||||||||  |||||||||  | |||||| ||||||||||||||||||| |||||||| |||||    
T  5973209 ggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatac--gacaccttgtatttatcttttaaaaaatttaaatagaacattg 5973113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 8646207 - 8646302
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||||| ||||||||||| || |||||||| |||| ||||| | |||||||||  |  ||||| ||||||||||||||||||| |||||||| |||||    
T  8646207 ggtttcttatgtatacggtagtgattttcacatttgcgtgtatg-catatatac--gataccttgtatttatcttttaaaaaatttaaatagaacattg 8646302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 30883116 - 30883175
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||   ||||||||||    
T  30883116 cgtccctgagtgggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 30883175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 39332507 - 39332411
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||||| || |||||||||||||| ||||| || ||||||   | |||||| |||||||||||| |||||  |||||||| |||||    
T  39332507 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatata--tgacaccttgtatttatctttttaaaaaattaaatagaacattg 39332411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 3048828 - 3048774
Alignment:
Q  71 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    |||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  3048828 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 3048774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 249
Target Start/End: Original strand, 8102845 - 8102883
Alignment:
Q  211 ttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  8102845 ttaggcctattagaattgggtcctcttgcttttggtgtt 8102883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 5721560 - 5721650
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaataga 348  Q
    |||| |||| ||||||||| || |||||||| ||||||||||| |  ||||||   |||||||| ||||||||||||||||||  ||||||||    
T  5721560 ggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatag--ggcaccttgtatttatcttttaaaaaaattaaataga 5721650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 441
Target Start/End: Complemental strand, 41677276 - 41677092
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt-aaaaaatataaatagatcattg 354  Q
    |||| ||||||||||| || || |||||||||||| | ||||  |||||||||  || || ||| |||||||||||| ||||||| |||||||| |||||    
T  41677276 ggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatata--cgacatcttgtatttatcttttaaaaaaatttaaatagaacattg 41677179  T
Q  355 ctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccct 441  Q
     | |||          |||||||| ||||||| |  | |||||||||| || |||||| |||||||||||||| |||| || |||||    
T  41677178 ttcttttaaaaaaaaatacgtttttattttattataggtctcttttcactcacagagccgagcctccgaattcgtaggaaccgccct 41677092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 8646129 - 8646169
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  8646129 ttttaggcctattcgaattaggtcatcttgcttttggtgtt 8646169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 15167587 - 15167547
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  15167587 ttttaggcctattagaattgggtcctcttacttttggtgtt 15167547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 41677347 - 41677307
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  41677347 ttttaggcctattagaatcgggtcctcttgcttttggtgtt 41677307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 45472201 - 45472257
Alignment:
Q  70 cctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||   |||||||||||    
T  45472201 cctgagggggtgcaaacagctcaaccgagctgggccacccccaaggatgggcctcaa 45472257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 14510084 - 14509989
Alignment:
Q  256 ggtttctcatgtatacggtggtcatttt-cacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||||| || ||||| ||| ||||||||||| | |||||    || |||||||||||| ||||||||||||| ||||| || |||||    
T  14510084 ggttactcatgtatacggtagtgatttttcacatttgggtgtaccgtatata----cgacaccttatatttgtcttttaaaaaatttaaattgaacattg 14509989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 45294647 - 45294597
Alignment:
Q  58 agcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    |||||| |||||| |||||||||||||||||||| |  |||||||||||||    
T  45294647 agcagggccgtccttgagggggtgcaaacagctctaatgagctgggcctcc 45294597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 11290113 - 11290150
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggt 246  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  11290113 ttttaggcctattagaattgggtcctgttgcttttggt 11290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 15270191 - 15270142
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||| ||| ||||| || |||||||||||||| |||||||||||||||||    
T  15270191 cagggccggccctggggaggtgcaaacagctctacagagctgggcctccc 15270142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 7944696 - 7944656
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||||||| ||||  ||||||||||||||||||||    
T  7944696 ttttaggcctattaaaattgtgtcctcttgcttttggtgtt 7944656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 15078689 - 15078729
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||| |||||||| ||||||||| |||||||||||    
T  15078689 ttttaggcctgttagaattgggtcctcttacttttggtgtt 15078729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 51 - 445
Target Start/End: Complemental strand, 27507050 - 27506656
Alignment:
Q  51 gatcatcagcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagta 148  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| |||||    
T  27507050 gatcaccaccaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaattttttttttaatacccattagta 27506951  T
Q  149 ctactgccctccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgt 248  Q
    ||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27506950 ctactgccctccaaaaaaaatttaatacccccagccattttctgtctccttgttttagccttttaggcctattagaattaggtcatcttgcttttggtgt 27506851  T
Q  249 t-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatag 347  Q
    | |||||| ||| ||||||||||| || |||||||| ||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||    
T  27506850 taggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatata--cggcaccttatatttatcttttaaaaaatataaatag 27506753  T
Q  348 atcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgatc 445  Q
    |||||||||||||          |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27506752 atcattgcttttt-tttaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctgatc 27506656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 60 - 444
Target Start/End: Original strand, 24410236 - 24410625
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||| |||||||||| ||||    
T  24410236 caggcccgtccctaagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccattagtactactaccct 24410335  T
Q  159 ccnnnnnnnnttt-aatacccccagccattttctgtcccc-ttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggt-gg 254  Q
    ||        ||| |||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| ||    
T  24410336 ccaattttttttttaatacccccagctattttctgtcccccttgttttagccttttaggccaattagaattaggtcctcttgtttttggtgttaggtggg 24410435  T
Q  255 gggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  24410436 gggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattg 24410533  T
Q  355 cttttt--nnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
     |||||            |||||||||||||||||||||  |||||||||||| || | | |||||||||||||||||||||||||||||||    
T  24410534 ttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagggacggccctgat 24410625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 60 - 442
Target Start/End: Original strand, 26715931 - 26716313
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| |||||||||    
T  26715931 caggcccggccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccactagtattactgccct 26716030  T
Q  159 ccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
     |        ||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||||| ||||||||    
T  26716031 tcaattttt-tttaatacccccagccattttatgtccccttgttttagtcttttagacctattagaattaggttctcttgctttttgtgttaggtggggg 26716129  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt-aaaaaatataaatagatcattgct 356  Q
    || |||||||||||||| ||||||||||||||||||||||| |||||||||   ||||||||||||||||||||| |||||||||||||||| |||||||    
T  26716130 ttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--tggcaccttatatttatcttttaaaaaaatataaatagaacattgct 26716227  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
     |||          |||||||||||||||||||||  |||||||||||| || ||| |||||  ||||||||||||||||||||||    
T  26716228 cttttaaaaaaaaatacgttttgattttatcactgacctcttttcattcccaaagccgagccaacgaattcttagggacggccctg 26716313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 60 - 439
Target Start/End: Complemental strand, 10762865 - 10762488
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||          |||||||||| ||||||||| ||    
T  10762865 cagggccggccctgaggggatgcaaacagctcaacagagctgggcttccctcaatcatgggcctcaattttttttttaatacccactggtactactgtcc 10762766  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  10762765 tccaattgtt-tttaataccctcagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcatttggtgttaggtgggg 10762667  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||||||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||    
T  10762666 gttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacc--gcaccttatatttatcttttaaaaaatataaatagaacattgct 10762569  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggcc 439  Q
     |||           ||||||| ||||||||||||  |||||||||||| ||||||||||||||| |||||||||||||||||    
T  10762568 ctttaaaaaaaaa--acgttttaattttatcactggcctcttttcattcccagagctgagcctccaaattcttagggacggcc 10762488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 60 - 442
Target Start/End: Original strand, 9045832 - 9046213
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||| ||||| |||||||||    
T  9045832 caggcccggtcctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccattagtattactgccct 9045931  T
Q  159 ccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
    ||        ||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  9045932 ccaattttt-tttaatacccccagctattttatgtccccttgttttagtcttttaggcttattagaattaggtcctcttgctttttgtgttaggtggggg 9046030  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt-aaaaaatataaatagatcattgct 356  Q
    || |||||||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||| ||||| |    
T  9046031 ttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaaatataaatagaacattg-t 9046127  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    | ||          |||||||||||||||||||||  ||||||| |||| ||||||||||||  ||||||||| ||||||||||||    
T  9046128 tcttttaaaaacaatacgttttgattttatcactggcctcttttaattcccagagctgagccaacgaattctttgggacggccctg 9046213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 184 - 444
Target Start/End: Complemental strand, 29940037 - 29939779
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||| |||||||    
T  29940037 cattttctgtcctcttgttttaaccttttaggtctattagaattagttcctcttgcttttggtgttaggtggtggttcctcatgtatacggtagtcattt 29939938  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||||||||||||| |||||||||  || |||||| |||||||||| ||||||||||||||||| ||||||| |||          ||||||||||||    
T  29939937 tcacctttgggtgtaccgcatatata--cgacaccttgtatttatcttgtaaaaaatataaatagaacattgctcttt-taaaaaaaatacgttttgatt 29939841  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    |||||||||  ||||||| |||| |||||| |||||| |||||||| |||||||| ||||||    
T  29939840 ttatcactgacctctttttattcccagagccgagccttcgaattctcagggacggtcctgat 29939779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 208 - 443
Target Start/End: Original strand, 4505845 - 4506079
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||| |||| ||||||||| |||||||    
T  4505845 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatata 4505944  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    ||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          || ||||||||||||||||||  |||||||||||      
T  4505945 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttc 4506042  T
Q  407 cagagctgagcctccgaattcttagggacggccctga 443  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  4506043 cagagccgagcctccgaattctcagggacggccctga 4506079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 81 - 259
Target Start/End: Original strand, 8327488 - 8327669
Alignment:
Q  81 gcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccctccnnnnnnnntttaatacccc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||        |||||||||||    
T  8327488 gcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccactagtactactgccctccaatttttttttaatacccc 8327587  T
Q  180 -cagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtt 259  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8327588 ccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggtt 8327669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 208 - 442
Target Start/End: Original strand, 3155168 - 3155401
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  3155168 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatata 3155267  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    ||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          || ||||| ||||||||||||  ||||||||||| |    
T  3155268 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttaattttatcactgacctcttttcatttt 3155365  T
Q  407 cagagctgagcctccgaattcttagggacggccctg 442  Q
     | ||| ||||||||||||||| |||||||||||||    
T  3155366 taaagccgagcctccgaattctcagggacggccctg 3155401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 8907230 - 8906996
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||| |||||||    
T  8907230 cttttaggattattagaattaattcctcttgattttggtgttaggtgggggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatata 8907131  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattc 405  Q
    ||  |||| |||| |||||||||||||||||||||||||||| |||| || ||||          || ||||||||||||||||||  |||||||||||     
T  8907130 ta--cggcgccttgtatttatcttttaaaaaatataaatagaacattactcttttaaaaaaaaattatgttttgattttatcactggcctcttttcattt 8907033  T
Q  406 tcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||||| ||||||||||||||| ||| |||||||||    
T  8907032 tcagagccgagcctccgaattctcaggaacggccctg 8906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 218 - 439
Target Start/End: Original strand, 6964968 - 6965186
Alignment:
Q  218 tattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcac 316  Q
    |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||  ||||||    
T  6964968 tattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatata--cggcac 6965065  T
Q  317 cttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgag 416  Q
     || |||||||||||||||||||||||||||| ||||||| |||          ||  |||||||||||||||||  |||||||||||  |||||| |||    
T  6965066 tttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatta--ttttgattttatcactggcctcttttcatttccagagccgag 6965163  T
Q  417 cctccgaattcttagggacggcc 439  Q
    |||||||||||| ||||||||||    
T  6965164 cctccgaattctcagggacggcc 6965186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 12337599 - 12337365
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||  ||||||    
T  12337599 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatata 12337500  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattc 405  Q
    ||   | |||||| |||||||||||||||||||||||||||| ||||||| ||||          ||  |||||||||||||||||  |||||||||||     
T  12337499 ta--tgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaattatattttgattttatcactggcctcttttcattt 12337402  T
Q  406 tcagagctgagcctccgaattcttagggacggccctg 442  Q
     |||||| |||||| |||||||| |||||||||||||    
T  12337401 ccagagccgagccttcgaattctcagggacggccctg 12337365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 314 - 443
Target Start/End: Original strand, 8327674 - 8327802
Alignment:
Q  314 caccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagct 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||||||||||  |||| ||    
T  8327674 caccttatatttatcttttaaaaaatataaatagatcattgcttttttaaaaaaaa-tacgttttgattttatcactgatctcttttcatttccagaact 8327772  T
Q  414 gagcctccgaattcttagggacggccctga 443  Q
    ||||||||||||| |||||||||| |||||    
T  8327773 gagcctccgaatttttagggacggtcctga 8327802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 438
Target Start/End: Original strand, 40636164 - 40636317
Alignment:
Q  282 ttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgat 381  Q
    ||||||| ||||||||| ||||||||||  | |||||| |||||||||||||||||||||||||||| ||||||| |||          || ||||||||    
T  40636164 ttcacctctgggtgtaccgcatatatac--gacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tatgttttgat 40636260  T
Q  382 tttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||| |||||||||    
T  40636261 tttatcactggcctcttttcattcccagagctgagcctccgaattctcagggacggc 40636317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 240 - 443
Target Start/End: Original strand, 7162767 - 7162968
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| ||| |||||| ||||| |||||||| ||||||||||||| || || ||| ||||||||||  |||||||| ||||||||||||||||||    
T  7162767 ttttggtgttaggtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatac--ggcaccttgtatttatcttttaaaaaa 7162864  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| ||| |||           || |||| ||||||||||||  |||||||||||| | ||||||||||| |||| ||| |||||||||    
T  7162865 tataaatagaacatcgctcttttaaaaaaaag-acattttaattttatcactggcctcttttcattccccgagctgagccttcgaaatctcagggacggc 7162963  T
Q  439 cctga 443  Q
    |||||    
T  7162964 cctga 7162968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 442
Target Start/End: Original strand, 3952989 - 3953188
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||| |||||||  |||||||||||| ||||||||| |||| |||||  |||||||| ||||||||||||||||||    
T  3952989 ttttggtgttaggtgggggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatac--ggcaccttgtatttatcttttaaaaaa 3953086  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| | | |||          ||| |||||||||||||||||  |||||||||||  || ||| |||||||| |||||| ||||||| |    
T  3953087 tataaatagaacatcggtcttt--aaaaaaaatacattttgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgac 3953184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 276 - 439
Target Start/End: Original strand, 34693995 - 34694155
Alignment:
Q  276 gtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgt 375  Q
    |||||||| |||| |||||||||  |||||||||  |||||||| |||||||||||||||||||||||||||| ||||||| |||          |||||    
T  34693995 gtcattttgacctctgggtgtaccacatatatac--ggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgt 34694091  T
Q  376 tttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggcc 439  Q
    |||||||||||||| |  |||||||||||  |||| | || |||||||||||| ||||||||||    
T  34694092 tttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34694155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 276 - 439
Target Start/End: Original strand, 34716407 - 34716567
Alignment:
Q  276 gtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgt 375  Q
    |||||||| |||| |||||||||  |||||||||  |||||||| |||||||||||||||||||||||||||| ||||||| |||          |||||    
T  34716407 gtcattttgacctctgggtgtaccacatatatac--ggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgt 34716503  T
Q  376 tttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggcc 439  Q
    |||||||||||||| |  |||||||||||  |||| | || |||||||||||| ||||||||||    
T  34716504 tttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 16097008 - 16097104
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||| ||| || ||||||||||||||||||||  |||||||||  |||||||| ||||||||||||||||||| |||||||| |||||    
T  16097008 ggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatac--ggcaccttgtatttatcttttaaaaaatttaaatagaacattg 16097104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 4505685 - 4505744
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||    
T  4505685 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaatgatgggcctca 4505744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 24035642 - 24035551
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||||||| |||| || |||||||||||| ||||||  |||| |||||  |||||||| ||||||||||||||||||| |||||||| |||||    
T  24035642 ctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatac--ggcaccttgtatttatcttttaaaaaatttaaatagaacattg 24035551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 5952791 - 5952642
Alignment:
Q  282 ttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgat 381  Q
    ||||||| ||||||||| ||||||||||  |||||||| |||||||||||||||||  ||||||| | ||||||| |||          |||||||||||    
T  5952791 ttcacctctgggtgtaccgcatatatac--ggcaccttgtatttatcttttaaaaa--ataaatataacattgctcttt-taaaaaaaatacgttttgat 5952697  T
Q  382 tttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacg 436  Q
    ||||||| ||  ||||||||||||  ||||| || |||||||||||| |||||||    
T  5952696 tttatcattggcctcttttcattccgagagccgaacctccgaattctcagggacg 5952642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 13800624 - 13800550
Alignment:
Q  279 attttcaccttt-gggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||||||| |||||||  ||||||||||  |||||||||||||||||||||||||||| |||||||| |||||    
T  13800624 attttcaccttttgggtgtatcgcatatatac--ggcaccttatatttatcttttaaaaaatttaaatagaacattg 13800550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 3155009 - 3155068
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  3155009 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 3155068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 6964798 - 6964857
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  6964798 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 6964857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 38400798 - 38400894
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||||| || |||||||||||||  ||||  |||||||||   | |||||| ||||||||||||||||||| |||||||| |||||    
T  38400798 ggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatat--gacaccttgtatttatcttttaaaaaatttaaatagaacattg 38400894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 7162683 - 7162743
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  |||||||||||||| ||   |||||||||||    
T  7162683 cgtccctgagggggtgcaaacagctcaaacgagctgggcctcccacaaggatgggcctcaa 7162743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 12337749 - 12337689
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||   |||||||||||    
T  12337749 cgtccctgagggggtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaa 12337689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 442
Target Start/End: Complemental strand, 1396730 - 1396617
Alignment:
Q  329 ttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattct 428  Q
    |||||||||||||||||||| ||||||| |||          || ||||||||||||||||||  |||||||||||  |||||  |||||||||||||||    
T  1396730 ttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagtcgagcctccgaattct 1396631  T
Q  429 tagggacggccctg 442  Q
     | ||| |||||||    
T  1396630 caaggaaggccctg 1396617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 3952910 - 3952965
Alignment:
Q  71 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  3952910 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 3952965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 28425812 - 28425716
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| ||||| |||| ||| || |||||||| ||||||||||| |||||||||  || |||||| ||||||||||||||||  | |||||||| |||||    
T  28425812 ggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatata--cgacaccttgtatttatcttttaaaatttttaaatagaacattg 28425716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 34693153 - 34693212
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||   ||||||||||    
T  34693153 cgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 34693212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 34715565 - 34715624
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||   ||||||||||    
T  34715565 cgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 34715624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 10252335 - 10252375
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  10252335 ttttaggcctattagaattgggtcatcttgcttttggtgtt 10252375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 12134134 - 12134065
Alignment:
Q  264 atgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaa 335  Q
    ||||||||||| || |||||||| ||||||||||  |||||||||  ||| ||||| |||||||||||||||    
T  12134134 atgtatacggtagtgattttcacttttgggtgtatcgcatatata--cggtaccttgtatttatcttttaaa 12134065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 24035719 - 24035679
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  24035719 ttttaggtctattagaattaggtcctcttgcttttagtgtt 24035679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 29694312 - 29694352
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  29694312 ttttagacctattagaattgggtcctcttgcttttggtgtt 29694352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 42029201 - 42029241
Alignment:
Q  314 caccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||||||||||||||||||||| |||||||| |||||    
T  42029201 caccttatatttatcttttaaaaaatttaaatagaacattg 42029241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 21665802 - 21665706
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||||| || |||||||| ||| | ||||   |||||||||  | |||| | ||||||||||||||||||| |||||||| |||||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatac--gacaccgtgtatttatcttttaaaaaatttaaatagaacattg 21665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 8907389 - 8907343
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||    
T  8907389 cgtccctgagggggtgcaaacagctcaaacaagctggacctccctca 8907343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 40635968 - 40636014
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||| ||||||||||||||||||||  ||| |||||||||||||    
T  40635968 cgtccctaagggggtgcaaacagctcaaacgagttgggcctccctca 40636014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 21190992 - 21190943
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||||||| ||||  |||||||||||||||||||  ||||||||||||||    
T  21190992 caggcccggcccttggggggtgcaaacagctcaatggagctgggcctccc 21190943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 30175519 - 30175568
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||||||| ||||  |||||||||||||||||||  ||||||||||||||    
T  30175519 caggcccggcccttggggggtgcaaacagctcaatggagctgggcctccc 30175568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 37182670 - 37182723
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatac 309  Q
    |||| |||||||||||||| || |||||||| ||||||||||  ||||||||||    
T  37182670 ggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatac 37182723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 53016 - 52968
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    |||| ||| |||||||||||||||| |||||| || |||||||||||||    
T  53016 cagggccgaccctgagggggtgcaagcagctctactgagctgggcctcc 52968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 11912932 - 11912892
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||| ||||| ||||||||||    
T  11912932 ttttaggcctattagaattgggtcatcttgattttggtgtt 11912892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 12134214 - 12134174
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||||||||||||  || |||||||||||||||||    
T  12134214 ttttaggcctattagaattgagttctcttgcttttggtgtt 12134174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 37182598 - 37182638
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||    
T  37182598 ttttaggcctattagaattgggtcatcttgcttttgctgtt 37182638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 38400726 - 38400766
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||  |||| ||||||||||||||||    
T  38400726 ttttaggcctattagaatagggtcatcttgcttttggtgtt 38400766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 223; Significance: 1e-122; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 60 - 434
Target Start/End: Complemental strand, 235525 - 235151
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||          |||||||||||||||||||||||    
T  235525 caggcccgtccctgagggggtgcaaacagcttaacagagctgggcctccctcagtcatggaccttaattttttttttaatacccactagtactactgccc 235426  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttggtggggg 257  Q
    |||        |||||||||| || |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  235425 tccaaattttttttaataccctcaaccattttctgtccc-ttgttttagtcttttaggcctattagaattaggtcctcttgcttttggtgttggtggggg 235327  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctt 357  Q
    ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  235326 tttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctt 235227  T
Q  358 tttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttaggga 434  Q
    |||          ||||||||||||||||||||| |||||||||||||||| ||| || ||||||||||||||||||    
T  235226 ttt-aaaaaaaaatacgttttgattttatcactggtctcttttcattctcatagccgaacctccgaattcttaggga 235151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 60 - 442
Target Start/End: Original strand, 17353759 - 17354142
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  17353759 caggcccggccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccactagtactactgccct 17353858  T
Q  159 ccnnnnnnnnttt-aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |         ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17353859 ctaattttttttttaatacccccagccattttctgtccccttgttttagccttttaggtctattagaattaggtcctcttgcttttggtgttaggtgggg 17353958  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    |||  ||||||||||| | ||||||||||| ||||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||| |||||||    
T  17353959 gttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatata--cgacaccttatatttatcttttaaaaaatataaatagaacattgct 17354056  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||          |||||||||||||||||||||  ||||||||||||  ||||  |||||||||||||||||||||||||||||    
T  17354057 ttttttaaaaaaaatacgttttgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttagggacggccctg 17354142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 64 - 444
Target Start/End: Complemental strand, 27788984 - 27788606
Alignment:
Q  64 cccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccctccn 161  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||| |||||||||||     
T  27788984 cccggccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaaatttttttttaatacccactagtattactgccctcca 27788885  T
Q  162 nnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggttt 260  Q
           ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||     
T  27788884 attttt-tttaatacccccaaccattttctgtccccttattttagtcttttaggcctattaaaattaggtcatcttgcttttggtgttaggtgggggttc 27788786  T
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgcttttt 360  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||  |||||| |||    
T  27788785 ctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaaaattgctcttt 27788688  T
Q  361 nnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
              |||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  27788687 --taaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctgat 27788606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 60 - 444
Target Start/End: Complemental strand, 20712018 - 20711636
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||| ||||| ||    
T  20712018 caggcccggccctgaggaggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaattttttttttaatacccactagtattactgtcc 20711919  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||  |||| | |||||    
T  20711918 tccaattt---tttaatacccccagccattttctgtccccttgttttaatcttttaggcctattagaattaggtcatcttgcttttaatgttagatgggg 20711822  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  20711821 gttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgct 20711724  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
     |||          |||||||||||||||| ||||  |||||||||||| |||| | ||||||||||||||| ||||||| |||||||    
T  20711723 cttttaaaaaaaaatacgttttgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtccctgat 20711636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 60 - 432
Target Start/End: Original strand, 28075588 - 28075964
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    |||||||| | |||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||          |||||||||||||||||||| ||    
T  28075588 caggcccggctctgagggggtgcaaacagctcaacagagctaggcttccttcagtcatgggcttcaattttttttttaatacccactagtactactgtcc 28075687  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  28075688 tccaatttttttttaatacccccagccattttctgtctccttgttttagccttttatgcctattagaattaggtcctcttgtttttggtgttaggtgggg 28075787  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||||||||| ||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  28075788 gttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgct 28075885  T
Q  357 tttt---nnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagg 432  Q
    ||||             |||||||||||||| ||||||  |||||||||||| |||||| |||||||| ||||||||||    
T  28075886 ttttaaaataaaaaaaatacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 28075964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 60 - 436
Target Start/End: Original strand, 19986966 - 19987330
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||          |||||||||||||||||||||||    
T  19986966 caggcccggccctaagggggtgcaaacagctcaacagagctgggcctccctcaattatgggcctcaaatttttttttaatacccactagtactactgccc 19987065  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    | |        |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  19987066 ttcaatttttttttaatacccccagccattttccgtccccttgttttagccttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggg 19987165  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
     || || ||||||| |||   ||||||||| ||||||||||            ||| ||| |||||||||||||| |||||||||||||||||||||||     
T  19987166 attccttatgtatatggtaaccattttcacatttgggtgta------------ccgtcactttatatttatctttaaaaaaatataaatagatcattgc- 19987252  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacg 436  Q
    ||||          ||||||||||  |||||||||  ||||||||||||| ||||| || ||||||||||||||||||||    
T  19987253 ttttcttaaaaaaatacgttttga--ttatcactgacctcttttcattctgagagccgatcctccgaattcttagggacg 19987330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 13727550 - 13727317
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  13727550 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 13727451  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    ||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          || ||||||||||||||||||  |||||||||||      
T  13727450 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttc 13727353  T
Q  407 cagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||| ||||||||||||||| |||||||||||||    
T  13727352 cagagccgagcctccgaattctcagggacggccctg 13727317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 169 - 438
Target Start/End: Original strand, 34397773 - 34398039
Alignment:
Q  169 tttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgt 267  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||| |||||||    
T  34397773 tttaatacccccaaccattttctgtcctcttgttttagccttttaggcctattagaattaggtcttcttgcttttggtgttaagtggaggttcctcatgt 34397872  T
Q  268 atacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnn 367  Q
     |||| | |||||||| |||||| ||||||| |||||||||  || |||||| |||||||||||||||||||||||||||| ||||||| |||           
T  34397873 ttacgatagtcatttttacctttaggtgtaccgcatatata--cgtcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaa 34397969  T
Q  368 nnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
       ||||||||||||||||||||| ||| |||| | || ||||   ||| |||||||||||||||||||||    
T  34397970 aaatacgttttgattttatcactggtcttttttta-tcccagatgcgagtctccgaattcttagggacggc 34398039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 208 - 443
Target Start/End: Original strand, 21280500 - 21280734
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||| ||| |||||||||||||| |||||||| |||| ||||||||| |||||||    
T  21280500 cttttaggattattagaattagttcctcttgattttggtgttaggtgggagttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatata 21280599  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    |||  |||||||| |||||||||||||||||||||||||||| ||||||| |||          || ||||||||||||||||||  |||||||||||      
T  21280600 tac--ggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttc 21280697  T
Q  407 cagagctgagcctccgaattcttagggacggccctga 443  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  21280698 cagagccgagcctccgaattctcagggacggccctga 21280734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 208 - 442
Target Start/End: Original strand, 21479449 - 21479683
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  21479449 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 21479548  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattc 405  Q
    ||  ||||||||| |||||||||||||||||||||||||||| ||||||| ||||          || ||||||||||||||||||  |||||||||||     
T  21479549 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcattt 21479646  T
Q  406 tcagagctgagcctccgaattcttagggacggccctg 442  Q
     |||||| |||||||| |||||| || ||||||||||    
T  21479647 ccagagccgagcctccaaattctcagagacggccctg 21479683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 184 - 356
Target Start/End: Complemental strand, 19737867 - 19737696
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||||||||  ||||| |||||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||    
T  19737867 cattttctgtcctcttgttttagccttttaggattattaaaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattt 19737768  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    |||||| | ||||||| |||||||||  ||||||||| ||||||||||| |||||||||||||||| |||||||    
T  19737767 tcacctctaggtgtaccgcatatata--cggcaccttgtatttatctttaaaaaaatataaatagaacattgct 19737696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 208 - 441
Target Start/End: Original strand, 33774072 - 33774305
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||    
T  33774072 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatata 33774171  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattc 405  Q
    ||  ||||||||| |||||||||||||||||||||||||||| |||| || ||||          || ||||||||||||| ||||  |||||||||||     
T  33774172 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattactcttttaaaaaaaaattatgttttgattttattactggcctcttttcattt 33774269  T
Q  406 tcagagctgagcctccgaattcttagggacggccct 441  Q
    ||||||| ||||||||||||||| | ||| ||||||    
T  33774270 tcagagccgagcctccgaattctcaaggatggccct 33774305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 442
Target Start/End: Complemental strand, 24711118 - 24710914
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||| || ||||||  ||||||||  ||||||||| ||||||||||||||||||    
T  24711118 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatata--cggcaccttgtatttatcttttaaaaaa 24711021  T
Q  339 tataaatagatcattgcttttt---nnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggac 435  Q
    |||||||||| |||  || |||              |||||||||||||||||||   |||||||||||| | |||||||||||||||||||| ||||||    
T  24711020 tataaatagaacatcactctttaaaaaaaaaaaaaaacgttttgattttatcactaacctcttttcattccctgagctgagcctccgaattctcagggac 24710921  T
Q  436 ggccctg 442  Q
    |||||||    
T  24710920 ggccctg 24710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 240 - 442
Target Start/End: Complemental strand, 30832643 - 30832443
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||| ||||||| |||||||||| || |||||||||  |||||||||  |||| ||| ||||||| ||||||||||    
T  30832643 ttttggtgttaggtgggggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatac--ggcatcttgtatttattttttaaaaaa 30832546  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    | |||||||| ||| ||  |||          |||||||||||||||||||||  |||||||||||| |||||| |||||| |||||||| |||||||||    
T  30832545 tgtaaatagaacatcgcgctttttaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagccttcgaattctcagggacggc 30832447  T
Q  439 cctg 442  Q
    ||||    
T  30832446 cctg 30832443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 278 - 442
Target Start/End: Complemental strand, 27314259 - 27314097
Alignment:
Q  278 cattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt-aaaaaatataaatagatcattgctttttnnnnnnnnnntacgtt 376  Q
    ||||||||||| || |||||| ||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||| |||          ||||||    
T  27314259 cattttcacctctgagtgtaccgcatatatac--ggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tacgtt 27314163  T
Q  377 ttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||||||||  |||||||||||| |||||  ||||||||||||| | |||||||||||||    
T  27314162 ttgattttatcactggcctcttttcattcccagagtcgagcctccgaattttcagggacggccctg 27314097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 440
Target Start/End: Complemental strand, 1155946 - 1155767
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgcttttt 360  Q
    |||||||||||||| ||||||||||||| ||| ||||| |||||||||   | |||||| |||||||||||||||||||||||||||| ||||||| |||    
T  1155946 ctcatgtatacggtagtcattttcacctctggatgtaccgcatatatat--gacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 1155849  T
Q  361 --nnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccc 440  Q
                ||| |||||||||||||||||  ||||||||||||  ||| | |||||||| |||| |||||||||||||    
T  1155848 aaaaaaaaaaattactttttgattttatcactgacctcttttcattcctagaaccgagcctccaaatttttagggacggccc 1155767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 13727709 - 13727650
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  13727709 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctca 13727650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 19741283 - 19741237
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  19741283 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctca 19741237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 21280339 - 21280385
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  21280339 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctca 21280385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 27314824 - 27314778
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  27314824 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctca 27314778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 21183777 - 21183687
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaataga 348  Q
    |||| |||||||||||||| || ||||||| ||||||||||||  ||||||||| |   || || ||||||||||||||||||| ||||||||    
T  21183777 ggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgct--actttgtatttatcttttaaaaaatttaaataga 21183687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 6159453 - 6159538
Alignment:
Q  267 tatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||| || |||| ||||||||  ||||| ||||||||||  | ||| || |||||||||||||||||||||||||||| |||||    
T  6159453 tatacggtagtgatttccacctttgaatgtaccgcatatatac--gacacattgtatttatcttttaaaaaatataaatagaacattg 6159538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 23070949 - 23070889
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  23070949 cgtccttgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 23070889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 2477686 - 2477590
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||||| || |||||||| ||| ||||||  |||||||||   | |||||| ||||||||||||||||||| ||||| || |||||    
T  2477686 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatat--gtcaccttgtatttatcttttaaaaaatttaaattgaacattg 2477590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 21479290 - 21479349
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||   ||||||||||    
T  21479290 cgtccctgagggggtgcaaacagctaaaacgagctgggcctccctcaaggatgggcctca 21479349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 11081746 - 11081684
Alignment:
Q  63 gcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||| |||| ||||||||||||||||||||  ||||| ||||||||| || |||||||||||    
T  11081746 gcccggcccttagggggtgcaaacagctcaatggagctaggcctccctaaggcatgggcctca 11081684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 12083700 - 12083640
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||| ||||||||||||||||||||||  ||||||||||| |||||   |||||||||||    
T  12083700 cgtccttgagggggtgcaaacagctcaaacgagctgggccttcctcaaggatgggcctcaa 12083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 24711202 - 24711142
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||   ||||||||||||| ||   |||||||||||    
T  24711202 cgtccctgagggggtgcaaacagctcaaacaagctgggcctcccccaaggatgggcctcaa 24711142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 11574447 - 11574494
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctc 107  Q
    |||| |||||| |||||||||||||||||||| || ||||||||||||    
T  11574447 caggaccgtccttgagggggtgcaaacagctctactgagctgggcctc 11574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 33773906 - 33773964
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||   ||||||||||    
T  33773906 cgtccctgagggggtgcaaaca-ctcaaatgagctgggcctccctcaaggatgggcctca 33773964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 20611794 - 20611889
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||| |||||||||||||| || |||||||||||||| |||  | | ||||||  || |||||| |||||||| |||||||||| ||| |||| ||||    
T  20611794 ggttcctcatgtatacggtagtgattttcacctttggatgt--gtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacatt 20611889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 27579135 - 27579089
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||| ||||||||||| ||||||||  |||||||||||||||||    
T  27579135 cgtccctaagggggtgcaaccagctcaaacgagctgggcctccctca 27579089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 30832717 - 30832667
Alignment:
Q  76 ggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  30832717 ggggtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctcaa 30832667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 4036957 - 4037031
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaa 337  Q
    ||||| |||||||| || || || ||||||||||||||  ||||||||  ||||||||| ||||||||| |||||||    
T  4036957 ctcatatatacggtagtgatctttacctttgggtgtac--catatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 30121706 - 30121746
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||| ||||||||||  |||||||||||||||||||||    
T  30121706 ttttaggtctattagaatcgggtcctcttgcttttggtgtt 30121746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 60 - 442
Target Start/End: Complemental strand, 16199092 - 16198709
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| |||||||||||    
T  16199092 caggcgcggccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaattttttttttaatacccactaatactactgccc 16198993  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16198992 tccaatttttttttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggg 16198893  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||||||||| ||||||||||||||||||||||  |||||||||  || ||||||||||||||||||||||||||||||||||| |||||||    
T  16198892 gttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatata--cgacaccttatatttatcttttaaaaaatataaatagaacattgct 16198795  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||          |||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  16198794 ttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggaaggccctg 16198709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 60 - 444
Target Start/End: Complemental strand, 38869659 - 38869277
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||||| ||||| | |    
T  38869659 caggcccggccatgagggggtgcaaacagctcaacaaagctgggcctccctcagtcatgggcctcaaattttttttaatacccactagtattactgtcat 38869560  T
Q  159 ccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
    ||        |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38869559 ccaattttt-tttaatacccccagtcattttctgtccccttgttttagtcttttaggcctattagaattaggtcctcttgcttttggtgttaggtggggg 38869461  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctt 357  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||| |||||||     
T  38869460 tttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cgacaccttatatttatcttttaaaaaatataaatagaacattgctc 38869363  T
Q  358 tttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    |||          |||||||||||||||| ||||  |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  38869362 ttt-taaaaaaaatacgttttgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccctgat 38869277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 60 - 445
Target Start/End: Original strand, 27923885 - 27924270
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||||    
T  27923885 caggcccgtccctgagggggtgcaaacagctcaacagagctggacctccctcagtcatgggcctcaatttttttttaatacccactagtactactgccct 27923984  T
Q  159 ccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
    ||        ||||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||| |    
T  27923985 ccaatttttttttaatatccccaaccattttctgtctccttgttttagtcttttaggcctattagaattaggtccttttgcttttggtgttaggcgggcg 27924084  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctt 357  Q
    || |||||||||||||| |||||||| |||||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  27924085 ttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaataggtcattgctt 27924182  T
Q  358 tttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgatc 445  Q
    |||          |||||||||||||||||||||  ||||||||||||||||||  ||||| ||||||||||||  ||||||||||||    
T  27924183 ttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagtcgagcccccgaattcttagaaacggccctgatc 27924270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 442
Target Start/End: Original strand, 9364113 - 9364476
Alignment:
Q  79 gtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccctccnnnnnnnntttaatacc 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||         |||| |||||||||||||||| ||||        |||||||||    
T  9364113 gtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatatccactagtactactgctctccaatttttttttaatacc 9364212  T
Q  178 cccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtgg 276  Q
    |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||| |    
T  9364213 cccagccattttatgtccccttgttttagtcttttaggtctattagaattaggtcctcttgcttttgatgttaggtgggggttcctcatgtatacggtag 9364312  T
Q  277 tcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgtt 376  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||           ||||||    
T  9364313 tcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgcttttaaaaaaaaaaatacgtt 9364410  T
Q  377 ttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||  |||||||    
T  9364411 ttgattttatcactggcctcttttcattcccagagctgagcctccgaattcttaggggtggccctg 9364476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 60 - 442
Target Start/End: Original strand, 7670728 - 7671118
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| || ||         || ||||||||||||||||| |||    
T  7670728 caggcccggccctgagggg-tgcaaacagctcaacagagttgggcctccctcagtcatgggtcttaatttttttttaacacccactagtactactgtcct 7670826  T
Q  159 ccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
    ||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  7670827 ccaatttttttttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggga 7670926  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt-aaaaaatataaatagatcattgct 356  Q
    |  |||||||||||||| ||||||||||||||||||||||| | | |||||  |||||||||||||||||||||| |||||||||||||||| |||||||    
T  7670927 tacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatata--cggcaccttatatttatcttttaaaaaaatataaatagaacattgct 7671024  T
Q  357 tttt--------nnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||                  |||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  7671025 ttttttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaaggacggccctg 7671118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 60 - 358
Target Start/End: Complemental strand, 40389831 - 40389535
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnnaatacccactagtactactgccctc 159  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||        ||||||||||||||||| |||| ||    
T  40389831 caggcccggccctgagcgggtgcaaacagctcaacagacctgggcctccctcagtcatggacctcaattttttttaatacccactagtactattgccatc 40389732  T
Q  160 cnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggt 258  Q
    |        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  40389731 caattgtt-tttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttagtgttaggtgggggt 40389633  T
Q  259 ttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgcttt 358  Q
    | |||||  ||||||| ||||||||||||||||| ||||| |||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||    
T  40389632 tcctcataaatacggtagtcattttcacctttggatgtaccgcatatata--cgacaccttatatttatcttttaaaaaatataaatagaacattgcttt 40389535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 72 - 442
Target Start/End: Complemental strand, 16799610 - 16799240
Alignment:
Q  72 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccctccnnnnnnnntt 170  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||         || ||||| ||||| |||||||||||        ||    
T  16799610 tgagggggtgcaaacagctcaatagagctaggcctccctcagtcatgggcctcaatttttttttaacacccattagtattactgccctccaactttt-tt 16799512  T
Q  171 taatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtat 269  Q
    |||||||||||||| |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  16799511 taatacccccagccttttt-tgtccccttgttttagtcttttaggtctattagaattaggtcctcttgcttttggtgttatgtgggggttcctcatgtat 16799413  T
Q  270 acggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatca-ttgct-ttttnnnnnnn 367  Q
    |||||  |||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||||||||| || || || ||||           
T  16799412 acggtaatcattttcacctttgggtgtaccgcatatata--cggcaccttatatttattttttaaaaaatataaatagaacatttactcttttaaaaaaa 16799315  T
Q  368 nnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
       |||||||||||||||||||||   ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  16799314 aaatacgttttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagggacggccctg 16799240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 176 - 441
Target Start/End: Complemental strand, 28822522 - 28822253
Alignment:
Q  176 cccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggt 274  Q
    |||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  28822522 cccccaaccattttatgtccccttgttttagtcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcatcatgtatacggt 28822423  T
Q  275 ggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgcttttt-----nnnnnnnnn 369  Q
     ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||                  
T  28822422 agtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaaaaaa 28822325  T
Q  370 ntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccct 441  Q
     ||||||||||||||||||||   |||||||||||| || ||| || |||||||||||||||||||||||||    
T  28822324 atacgttttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttagggacggccct 28822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 184 - 444
Target Start/End: Original strand, 27078939 - 27079199
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||||||||  |||| ||||||| ||||||   |||||||||| |||||||||| ||||||||||| || |||||||    
T  27078939 cattttctgtcctcttgttttagccttttaggattattggaattagttcctctatattttggtgttaggtgggggttcctcatgtatacagtagtcattt 27079038  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgttttgat 381  Q
    |||||||| ||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||| ||||          |||||||||||    
T  27079039 tcacctttaggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaaatacgttttgat 27079136  T
Q  382 tttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  27079137 tttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggccctgat 27079199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 187 - 444
Target Start/End: Complemental strand, 16592243 - 16591988
Alignment:
Q  187 tttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttca 285  Q
    ||||||||  |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| ||||| |||||||| ||||||||||    
T  16592243 tttctgtcatcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatatatacggtagtcattttca 16592144  T
Q  286 cctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatttta 385  Q
    ||| ||||||||| |||||||||  || |||| | ||||||||||||| |||||||||||||| ||||||| |||          || ||||||||||||    
T  16592143 cctctgggtgtaccgcatatata--cgacaccctgtatttatcttttagaaaatataaatagaacattgctcttt-taaaaaaaatatgttttgatttta 16592047  T
Q  386 tcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    ||| ||  ||||||||||||||||||| |||||||| |||||| | |||||||||||||    
T  16592046 tcattggcctcttttcattctcagagccgagcctccaaattctcaaggacggccctgat 16591988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 208 - 434
Target Start/End: Complemental strand, 34756514 - 34756289
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| ||||| |||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  34756514 cttttaggattattagaattagttcctcttgattttgttgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 34756415  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    ||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          || ||||||||||||||||||  |||||||||||      
T  34756414 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttc 34756317  T
Q  407 cagagctgagcctccgaattcttaggga 434  Q
    |||||| ||||||||||||||| |||||    
T  34756316 cagagccgagcctccgaattctcaggga 34756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 184 - 439
Target Start/End: Original strand, 30854258 - 30854511
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||| ||||| |||||||||||||||||||  |||||||||||| |||||||  |||||||||| |||||||||| |||||||||||| | |||||||    
T  30854258 cattttatgtcctcttgttttagccttttaggattattagaattagttcctctta-ttttggtgttaggtgggggttcctcatgtatacgatagtcattt 30854356  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||| || |||||| ||||||||||  |||||||| |||||||||||||||||||||||||||| ||||||| |||          |||||||| |||    
T  30854357 tcacctctgagtgtaccgcatatatac--ggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaatacgttttaatt 30854454  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggcc 439  Q
    ||||| |||  || ||||||||| |||||| |||||||| |||| | ||||||||||    
T  30854455 ttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacggcc 30854511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 184 - 444
Target Start/End: Complemental strand, 22986719 - 22986471
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttggtgggggtttctcatgtatacggtggtcatttt 283  Q
    |||||||||||| ||||||||||| |||||||  |||||||||||| |||||||  |||| |          ||||||||||||||||||| ||||||||    
T  22986719 cattttctgtcctcttgttttagcattttaggattattagaattagttcctcttaatttttg----------ggtttctcatgtatacggtagtcatttt 22986630  T
Q  284 cacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattt 383  Q
    ||||| ||||||||| ||||||||||  | ||| || ||||| ||||||||||||||| |||||| ||||||| |||          |||||||||||||    
T  22986629 cacctatgggtgtaccgcatatatac--gacactttgtatttgtcttttaaaaaatattaatagaacattgctcttttaaaaaaaattacgttttgattt 22986532  T
Q  384 tatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  22986531 tatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccctgat 22986471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 240 - 438
Target Start/End: Original strand, 19523183 - 19523380
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||| ||| ||||||||||||| ||||||||| |||||||||  ||||||||| ||||||||||||||||||    
T  19523183 ttttggtgttaggtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaa 19523280  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||  ||| |||           |||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||    
T  19523281 tataaatagaacaccgctctttaaaaaaaaaacacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattctcagggacggc 19523380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 240 - 442
Target Start/End: Complemental strand, 36187995 - 36187795
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||  ||||||||| ||||||| ||||||||||    
T  36187995 ttttggtgttaggtggaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatata--cggcaccttgtatttatattttaaaaaa 36187898  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| ||| |||           ||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||    
T  36187897 tataaatagaacatcgctcttttaaaaaaaaa-acgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggc 36187799  T
Q  439 cctg 442  Q
    ||||    
T  36187798 cctg 36187795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 240 - 437
Target Start/End: Original strand, 2274874 - 2275070
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| ||| |||||||||| ||||||||||||| ||||||||| |||||||||  ||  ||||| ||||||||||||||||||    
T  2274874 ttttggtgttaggtgggggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatata--cgataccttgtatttatcttttaaaaaa 2274971  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacgg 437  Q
    |||||||||| ||| ||| |||          |||||||||||||||||||||  |||||||||||| |||| | ||||||||||||||| ||||||||    
T  2274972 tataaatagaacatcgctcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagaaccgagcctccgaattctcagggacgg 2275070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 261 - 442
Target Start/End: Complemental strand, 31194705 - 31194528
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgcttttt 360  Q
    |||||||||||||| || |||||||||| ||||| ||| ||||||||||  |||||||| |||||||||||||||||||||||||||| ||||||| |||    
T  31194705 ctcatgtatacggtagt-attttcacctctgggtttaccgcatatatac--ggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 31194609  T
Q  361 nnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
              ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| | |||||||||||||    
T  31194608 -taaaagaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 31194528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 240 - 442
Target Start/End: Complemental strand, 15480205 - 15480006
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||| ||||||| ||||||||||||| ||||||||| |||||||||  || || ||| ||||||||||||||||||    
T  15480205 ttttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatata--cgacatcttgtatttatcttttaaaaaa 15480108  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| | | |||          || ||||||||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||    
T  15480107 tataaatagaacatcggtcttt--aaaaaaaatatgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggc 15480010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 356
Target Start/End: Complemental strand, 23284164 - 23284063
Alignment:
Q  253 gggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcat 352  Q
    ||||||| |||||||||||||| |||||||||| |||||||||||| |||||||||  || |||||| ||||||   ||||||||||||||||||| |||    
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatata--cgacaccttgtatttagtctttaaaaaatataaatagaacat 23284067  T
Q  353 tgct 356  Q
    ||||    
T  23284066 tgct 23284063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 277 - 428
Target Start/End: Original strand, 7338021 - 7338170
Alignment:
Q  277 tcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgtt 376  Q
    |||||||||||||| ||||||| ||||||||||  | |||||| |||||||||||||||||||||||||||| ||||||| |||           |||||    
T  7338021 tcattttcacctttaggtgtaccgcatatatac--gacaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaaaaaaaaaacgtt 7338118  T
Q  377 ttgattttatcactgctctcttttcattctcagagctgagcctccgaattct 428  Q
    |||||||||||  ||  ||||||||||||  ||||| |||||||| ||||||    
T  7338119 ttgattttatccttgacctcttttcattcctagagccgagcctccaaattct 7338170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 444
Target Start/End: Complemental strand, 31881527 - 31881346
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttt 359  Q
    |||||||||||||| || ||||||| || ||| ||| | ||||||||||  |||||| | |||||||||||||||||||||||||||| ||||||| |||    
T  31881527 ctcatgtatacggtagt-attttcatctctggatgttccgcatatatac--ggcaccgtgtatttatcttttaaaaaatataaatagaacattgctcttt 31881431  T
Q  360 tnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    |           ||||||||||||||| ||||  | |||||||||| |||||| |||||||  |||| | |||||||||||||||    
T  31881430 taaaaaaaaaaaacgttttgattttattactgaccacttttcattcccagagccgagcctctaaattttcagggacggccctgat 31881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 36868970 - 36868879
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||||||||| || |||||||| |||||||||||  ||||||||  || |||||| ||||||||||||||||||  |||||||| |||||    
T  36868970 ctcatgtatacggtagtgattttcacatttgggtgtaccacatatata--cgacaccttgtatttatcttttaaaaaaattaaatagaacattg 36868879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 15480289 - 15480229
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  15480289 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 15480229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 19523099 - 19523159
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  19523099 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 19523159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 442
Target Start/End: Complemental strand, 23284014 - 23283943
Alignment:
Q  371 tacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||||||||||||||  ||||||||||||  | | ||||||||| ||||||| |||||||||||||    
T  23284014 tacgttttgattttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggccctg 23283943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 31881650 - 31881604
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  31881650 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctca 31881604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 24395745 - 24395835
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    ||||| ||||||||||| |||||||||||||| ||||  | ||||||||    |||||| ||||||||||||||||||| |||||||| ||||    
T  24395745 ctcatctatacggtggtgattttcacctttggatgtattgtatatatacaa--caccttgtatttatcttttaaaaaatttaaatagaacatt 24395835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 40389518 - 40389461
Alignment:
Q  377 ttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttaggga 434  Q
    |||||||||||||||   ||||||||||| |||||| |||||||||||||||||||||    
T  40389518 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttaggga 40389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 10543682 - 10543755
Alignment:
Q  264 atgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaat 339  Q
    ||||||||||| || |||||||||||||| ||||  |||||||||  |  ||||||||||||||||||||||||||    
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatata--catcaccttatatttatcttttaaaaaat 10543755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 36188079 - 36188019
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||   |||||||||||    
T  36188079 cgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaa 36188019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 14318484 - 14318388
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||||| || |||||||  ||||| ||||   |||||||||  | |||||| ||||||||||||||||||| |||||||| |||||    
T  14318484 ggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatac--gacaccttgtatttatcttttaaaaaatttaaatagaacattg 14318388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 34756670 - 34756615
Alignment:
Q  70 cctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  34756670 cctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 34756615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 2024736 - 2024645
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||||| ||| || ||||||| |||||||||||   |||||||||  ||||| || ||||||||||| ||||||| |||||||| |||||    
T  2024736 ctcatgtatatggtagtgattttcatctttgggtgtatcacatatatac--ggcacattgtatttatctttaaaaaaatttaaatagaacattg 2024645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 2530996 - 2530901
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||| ||||||||||| || || |||||||||||||| ||||| | |||||||  || ||| || ||||||||||||||||||  |||||||| ||||    
T  2530996 ggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatata--cgacacattgtatttatcttttaaaaaacttaaatagaacatt 2530901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 26719043 - 26718953
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    ||||||||| |||| || ||||||||||||| |||||  |||||||||  || ||| || ||||||||||||||||| | |||||||| ||||    
T  26719043 ctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatata--cgacactttgtatttatcttttaaaaattttaaatagaacatt 26718953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 26988787 - 26988697
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    ||||||||| |||| || ||||||||||||| |||||  |||||||||  || ||| || ||||||||||||||||| | |||||||| ||||    
T  26988787 ctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatata--cgacactttgtatttatcttttaaaaattttaaatagaacatt 26988697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 11242489 - 11242449
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  11242489 ttttatgcctattagaattgggtcctcttgcttttggtgtt 11242449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 15639575 - 15639615
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  15639575 ttttaggcctattagaattgggtcctcttacttttggtgtt 15639615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 28822612 - 28822576
Alignment:
Q  71 ctgagggggtgcaaacagctcaacagagctgggcctc 107  Q
    |||||||||||||||||||||||||||| ||||||||    
T  28822612 ctgagggggtgcaaacagctcaacagagttgggcctc 28822576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 34425832 - 34425872
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  34425832 ttttaggcctattagaattgagtcctcttgcttttggtgtt 34425872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 1366625 - 1366529
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| ||||| |||||||| || |||||||| ||| ||||||  |||||||||||   || ||| |||||||||| |||||||| |||||||| |||||    
T  1366625 ggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatatacc--acatcttgtatttatcttataaaaaatttaaatagaacattg 1366529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 22987528 - 22987481
Alignment:
Q  66 cgtccctgaggggg-tgcaaacagctcaacagagctgggcctccctca 112  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||    
T  22987528 cgtccctgaggggggtgcaaacagctcaaacgagctgggcctccctca 22987481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 33037781 - 33037869
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaata 346  Q
    |||| ||||||||||||||  |  |||||||||||||||||||  |||||||||  |  | ||| ||||||||||||||||||| ||||||    
T  33037781 ggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatac--gatatcttgtatttatcttttaaaaaatttaaata 33037869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 34425904 - 34426000
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| ||||||||||||||  | ||||| | |||| ||||||   |||||||||  |||||||| |||||||||||||||||||  ||||||| |||||    
T  34425904 ggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatac--ggcaccttgtatttatcttttaaaaaattgaaatagaacattg 34426000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 40794426 - 40794338
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaata 346  Q
    ||||||||||||||||||| || |||||||||||| ||||||   |||||||   |||| | || ||||| ||||||||||||| ||||||    
T  40794426 ggtttctcatgtatacggtagtgattttcaccttttggtgta--tcatatatttacggctctttgtatttgtcttttaaaaaatttaaata 40794338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 2274808 - 2274850
Alignment:
Q  70 cctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||  ||| |||||||||||||    
T  2274808 cctgagggggtgcaaacagctcaaatgagttgggcctccctca 2274850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 16592905 - 16592863
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    ||||||||||||||||||||||||||||  ||||||| |||||    
T  16592905 cgtccctgagggggtgcaaacagctcaaacgagctggacctcc 16592863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 30853272 - 30853314
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    ||||||| ||||||||||||||||||||  |||||||||||||    
T  30853272 cgtcccttagggggtgcaaacagctcaaacgagctgggcctcc 30853314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 606211 - 606251
Alignment:
Q  314 caccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  606211 caccttgtatttatcttttaaaaaatttaaatagaacattg 606251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 2024811 - 2024771
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||| ||||||||||  ||||||||||||||||||||    
T  2024811 ttttaggcatattagaattgagtcctcttgcttttggtgtt 2024771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 7079561 - 7079601
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||| ||||||||||||||||| ||||||||||| ||||    
T  7079561 ttttagacctattagaattaggtcatcttgcttttgatgtt 7079601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 8433641 - 8433593
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    |||| |||||| |||||||||||||||||||| |  |||||||||||||    
T  8433641 cagggccgtccttgagggggtgcaaacagctctaatgagctgggcctcc 8433593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 40794496 - 40794456
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||| |||||||||| ||||||||| |||||||||||    
T  40794496 ttttaggcttattagaattgggtcctcttacttttggtgtt 40794456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 60 - 444
Target Start/End: Complemental strand, 13913782 - 13913396
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  13913782 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccactagtactactgccct 13913683  T
Q  159 ccnnnnnnnnttt-aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
     |        ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  13913682 tcaattttttttttaatacccccaaccattttctgtcccattgttttagccttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggg 13913583  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    |||||||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13913582 gtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaatataaatagatcattgct 13913483  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    ||||          ||| |||||||||||||||||   ||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  13913482 tttt-taaaaaaaatacattttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagggacggccttgat 13913396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 59 - 444
Target Start/End: Complemental strand, 40502091 - 40501705
Alignment:
Q  59 gcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgcc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||    
T  40502091 gcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaattttttttttaatacccactagtactactgcc 40501992  T
Q  157 ctccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggg 255  Q
    |||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| |||||     
T  40501991 ctctaaattttttttaatacccccagccattttctgtccccttgttttagccttttaggtctattagaattagatcatcttgcttttggtgttaggtgga 40501892  T
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgc 355  Q
    ||||  ||||||||||||| |||||||| |||||||||||||| |||||||||  || |||||||||||||||||||||||||||||||||||||||| |    
T  40501891 ggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatata--cgacaccttatatttatcttttaaaaaatataaatagatcattac 40501794  T
Q  356 tttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    |||||          |||||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40501793 tttttttttaaaaaatacgttttgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttagggacggccctgat 40501705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 60 - 443
Target Start/End: Original strand, 17168769 - 17169152
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnnaatacccactagtactactgccctc 159  Q
    |||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||        |||||||||||||||||||||||||    
T  17168769 caggcccgaccctgaggggatgcaaacagctcaatagagcttggcctccctcagtcatgggcctcaattttttttaatacccactagtactactgccctc 17168868  T
Q  160 cnnnnnnnnttt--aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |        |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||    
T  17168869 caattttcttttttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcttcttgcttttggtgttaggtaggg 17168968  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||||| ||| ||||||||||||||||||||||| |||||||||  |  ||||||||||||||||||||||||||||||||||| |||||||    
T  17168969 gttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatata--caacaccttatatttatcttttaaaaaatataaatagaacattgct 17169066  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
    ||||          |||||||||||||||||||||  |||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  17169067 tttt-ttaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattcttagggacggccctga 17169152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 76 - 442
Target Start/End: Original strand, 19955547 - 19955912
Alignment:
Q  76 ggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccctccnnnnnnnntttaat 174  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||| |||||||||          | ||    
T  19955547 ggggtgcaaacagctcaacagagctggacctccctcagtcatgggcctcaatttttttttaatacccactagtactgctgccctccaaaaaaaaaattat 19955646  T
Q  175 acccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacgg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  19955647 acccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatatatacgg 19955746  T
Q  274 tggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntac 373  Q
    | ||||||||||||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||          | |    
T  19955747 tagtcattttcacctttgggtgtaccgcatatata--cggtaccttatatttatcttttaaaaaatataaatagatcattgctttttaaaaaaaaatt-c 19955843  T
Q  374 gttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  19955844 gttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacagccctg 19955912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 60 - 442
Target Start/End: Complemental strand, 9173321 - 9172940
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||| || ||||||    
T  9173321 caggcccggccctgagggggtgcaaacagctcaacagagttgggcctccctcagtcatgggcctcaatttttttttaatacccactagtattattgccct 9173222  T
Q  159 ccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
    ||        ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  9173221 ccaattttt-tttaatatccccagccattttctgtccccttgttttagtcttttaggcctattagaattaggtcctcttacttttggtgttaggtggggg 9173123  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctt 357  Q
    || |||||||||||||| ||||||||||||||||| ||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  9173122 ttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgttt 9173025  T
Q  358 tttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||          ||| |||| | |||||||| |  |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  9173024 tttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 9172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 59 - 442
Target Start/End: Complemental strand, 1367178 - 1366797
Alignment:
Q  59 gcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgcc 156  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||| |||||||    
T  1367178 gcaggcacggccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaaaaaaaattttaatacccactagtattactgcc 1367079  T
Q  157 ctccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggg 255  Q
    ||||        |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  1367078 ctccaaaattt-tttaatacccccagccattttctgtccccttgttttagtcttttaggcctattagaattaggtcatcttgcttttggtgttaggtggg 1366980  T
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgc 355  Q
    |||| ||| |||||||||| |||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||    
T  1366979 ggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgc 1366882  T
Q  356 tttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    | ||           || ||||| | ||||||||||  |||||||||||| ||||||||||||||| ||||| ||| ||||||||||    
T  1366881 tctt--aaaaaaaaatatgttttcaatttatcactggcctcttttcattcccagagctgagcctccaaattcgtagagacggccctg 1366797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 72 - 360
Target Start/End: Original strand, 27559459 - 27559751
Alignment:
Q  72 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn---aatacccactagtactactgccctccnnnnnnnn 168  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||           |||||||||||||||||||||||||             
T  27559459 tgagggggtgcaaacagctcaacagagctggacctccctcagtcatgggcctcaatttttttttttaatacccactagtactactgccctcaaatttttt 27559558  T
Q  169 ttt--aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcat 265  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||    
T  27559559 tttttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttacttatggtgttaggtgggggttcctcat 27559658  T
Q  266 gtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgcttttt 360  Q
    ||||||||| ||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  27559659 gtatacggtagtcattttcacctttgggtgtaccgcatatata--cgacaccttatatttatcttttaaaaaatataaatagaacattgcttttt 27559751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 60 - 360
Target Start/End: Original strand, 44895467 - 44895760
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||           |||| ||||||||||||||| ||    
T  44895467 caggctcggccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggccacatttttttttttaatatccactagtactactgtcc 44895566  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44895567 tccaattttt-tttaatacccc-agccattttctgtccctttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggg 44895664  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| ||||||||||||||  ||||||||||||||||||||||         ||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  44895665 gttcctcatgtatacggtaatcattttcacctttgggtgtac--------cacccgccaccttatatttatcttttaaaaaatataaatagatcattgtt 44895756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 72 - 442
Target Start/End: Complemental strand, 51607727 - 51607358
Alignment:
Q  72 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn---aatacccactagtactactgccctccnnnnnnnn 168  Q
    ||||| |||||||||||||||| |||||||||||| ||||| ||||||||||||            |||| ||||||||||||||||||| |            
T  51607727 tgaggtggtgcaaacagctcaatagagctgggccttcctcaatcatgggcctcattttttttttttaatatccactagtactactgcccttcaatttttt 51607628  T
Q  169 tttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgt 267  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| || | |||| ||| |||||||    
T  51607627 tttaatacccccagc-attttctgttccctt-ttttagccttttaggcctattagaattatgtcctcttgcttttggtattagatgggagttcctcatgt 51607530  T
Q  268 atacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnn 367  Q
    ||||||| ||||||||||| ||||||||||| ||||||||| | | ||||||||||||||||||||||||||||||||| | ||||  |||||           
T  51607529 atacggtagtcattttcacgtttgggtgtaccgcatatata-cggccaccttatatttatcttttaaaaaatataaataaaacatt--ttttttttaaaa 51607433  T
Q  368 nnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
       |||||||||||||||||||||  |||||||||||| |||||| ||||||||||||| |||||||||| ||||    
T  51607432 aaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatttttagggacggtcctg 51607358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 184 - 443
Target Start/End: Original strand, 23185366 - 23185623
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |||||||    
T  23185366 cattttctgtcctcttgttttagccttttaggcctattagaattagttcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattt 23185465  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||| ||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          ||||||||||||    
T  23185466 tcacctatgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgttttgatt 23185562  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
    |||||||||  ||||||||| ||   |||| ||||||||||||||| ||| ||||||||||    
T  23185563 ttatcactggcctcttttcaatcctcgagccgagcctccgaattctcaggaacggccctga 23185623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 9181155 - 9180922
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||    
T  9181155 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatata 9181056  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    ||  |||||||||||||||||||||||||||||||||||||| ||||| |||||          ||| |||| | |||||||| |  ||||||||||||     
T  9181055 ta--cggcaccttatatttatcttttaaaaaatataaatagaacattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcc 9180958  T
Q  407 cagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||| |||||||||||||||||||||||||||||    
T  9180957 cagagccgagcctccgaattcttagggacggccctg 9180922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 184 - 444
Target Start/End: Complemental strand, 4971792 - 4971534
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |||||||    
T  4971792 cattttttgtcctcttgttttagccttttaggcctattagaattagttcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattt 4971693  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||| | ||||||||| |||||||||  ||| ||||| |||||||||||||||||||||||||||| ||||||| |||          || |||||||||    
T  4971692 tcacttatgggtgtaccgcatatata--cggtaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-aaaaaaaaatatgttttgatt 4971596  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    ||||||||| ||||||||||||| | || | ||||||| ||||||| |||||| ||||||||    
T  4971595 ttatcactggtctcttttcattccccgaaccgagcctcagaattctcagggacagccctgat 4971534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 191 - 442
Target Start/End: Original strand, 5316626 - 5316875
Alignment:
Q  191 tgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctt 289  Q
    ||||| |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||||||||     
T  5316626 tgtcctcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctc 5316725  T
Q  290 tgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcac 389  Q
    ||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          |||||||||||||||||||    
T  5316726 tgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgttttgattttatcac 5316822  T
Q  390 tgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||  ||||||||||||  |  |  |||||||| |||||| |||||||||||||    
T  5316823 tgacctcttttcattcctaaggtcgagcctccaaattctcagggacggccctg 5316875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 208 - 443
Target Start/End: Original strand, 44655704 - 44655937
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||| |||| ||||||||| |||||||    
T  44655704 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatata 44655803  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    ||  || |||||| |||||||||||||||||||||||||||| ||||||| |||          || |||||||||||||||||| ||||||||||||      
T  44655804 ta--cgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaattatgttttgattttatcactggtctcttttcatttc 44655900  T
Q  407 cagagctgagcctccgaattcttagggacggccctga 443  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  44655901 cagagccgagcctccgaattctcagggacggccctga 44655937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 224 - 442
Target Start/End: Original strand, 5027528 - 5027746
Alignment:
Q  224 aattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttata 322  Q
    |||||| ||||||||||||||||||| |||||||||| ||||| |||| ||| ||||||||||||| ||||||||| ||||||||||  |||||||| ||    
T  5027528 aattagttcctcttgcttttggtgttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatac--ggcaccttgta 5027625  T
Q  323 tttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctcc 421  Q
    |||||||||||||||||||||||||| ||||||| ||||          |||||||||||||||||||||  |||||||||||| | |||  ||||||||    
T  5027626 tttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattccccgagtcgagcctcc 5027725  T
Q  422 gaattcttagggacggccctg 442  Q
    ||||||| |||||||||||||    
T  5027726 gaattctcagggacggccctg 5027746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 184 - 439
Target Start/End: Original strand, 50881369 - 50881621
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||||||||  |||||||||||| |||||||  |||||||||| ||||| |||| ||||||||||| || |||||||    
T  50881369 cattttctgtcctcttgttttagccttttaggattattagaattagttcctcttaattttggtgttaggtggaggttcctcatgtatactgtagtcattt 50881468  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||| | | ||||| |||||||||  || |||||| |||||||||||||||||||||||||||| ||||||| |||          ||  |||| |||    
T  50881469 tcacctctagatgtaccgcatatata--cgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt--taaaaaaatagattttaatt 50881564  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggcc 439  Q
    |||||||||  |||||||||||  |||||| ||||||||||||||| ||||||||||    
T  50881565 ttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 50881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 240 - 442
Target Start/End: Original strand, 14146295 - 14146495
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||| || ||||||||| |||||||||  ||||||||| ||||||||||||||||||    
T  14146295 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaa 14146392  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| ||| |||          |||||||||||||||||||||  ||||||||||||  ||||| ||||||||||||||| |||||||||    
T  14146393 tataaatagaacatcgctcttt-taaaaaaaatacgttttgattttatcactggcctcttttcattccaagagccgagcctccgaattctcagggacggc 14146491  T
Q  439 cctg 442  Q
    ||||    
T  14146492 cctg 14146495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 240 - 442
Target Start/End: Original strand, 6771786 - 6771989
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| ||||| |||| ||| |||||||||| ||||||||||||| ||||||||| |||||||||  ||||||||| ||||||||||||||||||    
T  6771786 ttttggtgttaggtggaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaa 6771883  T
Q  339 tataaatagatcattgcttttt--nnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacg 436  Q
    |||||||||| ||| ||| |||             ||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||    
T  6771884 tataaatagaacatcgctctttaaaaaaaaaaaacacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacg 6771983  T
Q  437 gccctg 442  Q
    ||||||    
T  6771984 gccctg 6771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 240 - 442
Target Start/End: Original strand, 3406413 - 3406614
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||||||  | |||||| |||||||||  ||||||||| ||||||||||||||||||    
T  3406413 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatata--cggcaccttgtatttatcttttaaaaaa 3406510  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| ||| |||           ||||||| ||||||||||||  |||||||||||| | ||||||||||||| |||||| |||||| ||    
T  3406511 tataaatagaacatcgctcttttaaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagc 3406610  T
Q  439 cctg 442  Q
    ||||    
T  3406611 cctg 3406614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 240 - 442
Target Start/End: Complemental strand, 3440407 - 3440206
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||||||  | |||||| |||||||||  ||||||||| ||||||||||||||||||    
T  3440407 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatata--cggcaccttgtatttatcttttaaaaaa 3440310  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| ||| |||           ||||||| ||||||||||||  |||||||||||| | ||||||||||||| |||||| |||||| ||    
T  3440309 tataaatagaacatcgctcttttaaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagc 3440210  T
Q  439 cctg 442  Q
    ||||    
T  3440209 cctg 3440206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 27906867 - 27906646
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||               
T  27906867 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtg----------- 27906779  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
        ||||||||| ||||||||||||||||||||||||| || ||||||| |||          || ||||||||||||||||||  ||||||||||| |    
T  27906778 ---gcggcaccttgtatttatcttttaaaaaatataaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttt 27906682  T
Q  407 cagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||| ||||||||||||||| |||||||||||||    
T  27906681 cagagccgagcctccgaattctcagggacggccctg 27906646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 21741029 - 21740852
Alignment:
Q  265 tgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg--ctttttnn 362  Q
    |||||| ||| ||||||||||||| ||||||||  ||||||||||  |||||||| |||||||||||||||||||| ||||||| |||||  |||||       
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatac--ggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttttaaa 21740932  T
Q  363 nnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
            ||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  21740931 aaaaaaaatacattttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcaaggacggccctg 21740852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 250 - 436
Target Start/End: Original strand, 16140061 - 16140244
Alignment:
Q  250 ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagat 349  Q
    ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||||  |  |||||| ||||||||||||||||||||||||||||     
T  16140061 ggtggggattcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatata--caacaccttgtatttatcttttaaaaaatataaatagaa 16140158  T
Q  350 cattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacg 436  Q
    |||  || |||          ||||||||||||||||||| |  |||||||||||| |||||| ||||||||||||||| |||||||    
T  16140159 catcactcttt-taaaaaaaatacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattctcagggacg 16140244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 240 - 425
Target Start/End: Complemental strand, 41697255 - 41697072
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||| | ||| ||||| ||||||||||  |  || || ||||||||||||||||||    
T  41697255 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatac--gatactttgtatttatcttttaaaaaa 41697158  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaat 425  Q
    |||||||||| ||| ||| |||          |||||||||||||||||||||  |||||||||||| |||||| |||| |||||||    
T  41697157 tataaatagaacatcgctcttt-taaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcttccgaat 41697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 279 - 442
Target Start/End: Complemental strand, 22865538 - 22865378
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgtttt 378  Q
    |||||||||||||||||||| | |||||||    ||| ||| |||||||||||||||||||||||||||| ||||||| |||          ||||||||    
T  22865538 attttcacctttgggtgtaccg-atatataga--gcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttgaaaaaaaatacgtttt 22865442  T
Q  379 gattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||| ||  |||||||||||| |||||| | ||||||||||||| |||||||||||||    
T  22865441 gattttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggccctg 22865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 442
Target Start/End: Original strand, 6889644 - 6889805
Alignment:
Q  277 tcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgtt 376  Q
    |||||||||||| ||| ||||| ||||||||||  |  || || |||||||||||||||||||||||||||| ||||||| |||          ||||||    
T  6889644 tcattttcacctctggatgtaccgcatatatac--gatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa--tacgtt 6889739  T
Q  377 ttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||||||||  ||||||||||||||||| | ||||||||||||| | | |||||||||||    
T  6889740 ttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 442
Target Start/End: Original strand, 6891490 - 6891651
Alignment:
Q  277 tcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgtt 376  Q
    |||||||||||| ||| ||||| ||||||||||  |  || || |||||||||||||||||||||||||||| ||||||| |||          ||||||    
T  6891490 tcattttcacctctggatgtaccgcatatatac--gatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa--tacgtt 6891585  T
Q  377 ttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||||||||  ||||||||||||||||| | ||||||||||||| | | |||||||||||    
T  6891586 ttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6891651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 38547137 - 38547041
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||| | | || |||||||| |||||||||||  |||||||||  |||||||| ||||||||||||||||||| |||||||| |||||    
T  38547137 ggttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatac--ggcaccttgtatttatcttttaaaaaatttaaatagaacattg 38547041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 14146211 - 14146271
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  14146211 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 14146271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 23181710 - 23181777
Alignment:
Q  59 gcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||||| ||| || | |||||||||||    
T  23181710 gcagggccggccctgagggggtgcaaacagctcaaccgagctgggccacccccaatgatgggcctcaa 23181777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 44655545 - 44655604
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  44655545 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 44655604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 38853537 - 38853624
Alignment:
Q  259 ttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaataga 348  Q
    |||||||||||||||| || |||||||||||||| | |||  ||||||||  || |||||| |||||||| |||||||||| ||||||||    
T  38853537 ttctcatgtatacggtagtgattttcacctttggatatacaacatatata--cgacaccttgtatttatcatttaaaaaatttaaataga 38853624  T

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Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 41697339 - 41697293
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  41697339 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctca 41697293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 6888475 - 6888535
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||   |||||||||||    
T  6888475 cgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaa 6888535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 39134824 - 39134727
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatc-ttttaaaaaatataaatagatcattg 354  Q
    |||| ||||||||||| || || ||| |||||||||||||||  |||||||||  | ||||||| |||||||| ||||||||||| |||||||| |||||    
T  39134824 ggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatata--cagcaccttgtatttatctttttaaaaaatttaaatagaacattg 39134727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 27907008 - 27906949
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  27907008 cgtccttgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 45758506 - 45758602
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||||| || |||||||||||||| ||||   ||||||||  |  ||||||  |||||||||||||||||| |||||||| |||||    
T  45758506 ggttcctcatgtatacggtagtgattttcacctttggatgtataacatatata--caacaccttgcatttatcttttaaaaaatttaaatagaacattg 45758602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 5533329 - 5533404
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||||||| || |||||||||||||  |||||  ||||||||  ||||||||| | ||||||||||||||||    
T  5533329 ctcatgtatacggtagtgattttcacctttgattgtacatcatatata--cggcaccttgtgtttatcttttaaaaaa 5533404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 6771704 - 6771762
Alignment:
Q  68 tccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |   |||||||||||    
T  6771704 tccctgagggggtgcaaacagctcaaacgagctgggcctcccttaaggatgggcctcaa 6771762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 5028028 - 5027991
Alignment:
Q  72 tgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  5028028 tgagggggtgcaaacagctcaaccgagctgggcctccc 5027991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 26803960 - 26804045
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaata 346  Q
    ||||||||||||||||||| || |||||||||||   |||||  |||||||||  || || ||| ||||||||||||||||||| ||||||    
T  26803960 ggtttctcatgtatacggtagtgattttcacctt---gtgtatcgcatatata--cgacatcttgtatttatcttttaaaaaatttaaata 26804045  T

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Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 360
Target Start/End: Original strand, 33170771 - 33170873
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgc 355  Q
    ||||||||||||||||||| || ||||||||| || ||||||| ||||||||||    ||| || ||||||  ||||||||||| |||||| | |||||     
T  33170771 ggtttctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaa--cacattgtatttacgttttaaaaaatttaaatataacattgt 33170868  T
Q  356 ttttt 360  Q
    |||||    
T  33170869 ttttt 33170873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 34247151 - 34247208
Alignment:
Q  371 tacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattct 428  Q
    |||||||||||||||||||||  || ||||||||  |||||| |||||||||||||||    
T  34247151 tacgttttgattttatcactgaccttttttcatttccagagccgagcctccgaattct 34247208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 3406329 - 3406389
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||| ||||||||||||||||||||||  |||||||||||||| ||   |||||||||||    
T  3406329 cgtccttgagggggtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctcaa 3406389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 3440491 - 3440431
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||| ||||||||||||||||||||||  |||||||||||||| ||   |||||||||||    
T  3440491 cgtccttgagggggtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctcaa 3440431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 39134896 - 39134856
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  39134896 ttttaagcctattagaattgggtcctcttgcttttggtgtt 39134856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 50880574 - 50880614
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcct 106  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  50880574 cgtccctgagggggtgcaaacagctcaaacgagctgggcct 50880614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 43235871 - 43235791
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||| |||||||||||| | || ||||||||||||||||||||  ||||||||  || || ||| ||||||||||| ||||||    
T  43235871 ggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatata--cgacatcttgtatttatctttaaaaaaa 43235791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 16139966 - 16140012
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||| ||||||||||||||||||||||  ||| |||||||||||||    
T  16139966 cgtccttgagggggtgcaaacagctcaaacgagttgggcctccctca 16140012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 10912161 - 10912112
Alignment:
Q  59 gcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    ||||| ||| |||||||||||||| ||||||||||  |||||||||||||    
T  10912161 gcagggccggccctgagggggtgcgaacagctcaaacgagctgggcctcc 10912112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 12037601 - 12037637
Alignment:
Q  72 tgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    |||||||||||||||||||| || |||||||||||||    
T  12037601 tgagggggtgcaaacagctctactgagctgggcctcc 12037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 57 - 442
Target Start/End: Complemental strand, 20091582 - 20091197
Alignment:
Q  57 cagcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgc 155  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||         ||||||||| |||||||||||    
T  20091582 cagcaggcccgtccctg-gggggtgcaaacagctcaatagagctgggcctccctcagtcatgggcctcaatttttttttaatacccaccagtactactgc 20091484  T
Q  156 cctccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgg 254  Q
    |||||        ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  20091483 cctccaatttttttttaatacccccaaccattttatgtacccttgttttagccttttaggcctattagaattaggtcctcttacttttggtgttaggtgg 20091384  T
Q  255 gggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  20091383 gggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagatcattg 20091286  T
Q  355 -ctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
      |||||          |||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20091285 ttttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 20091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 58 - 442
Target Start/End: Complemental strand, 48984145 - 48983756
Alignment:
Q  58 agcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgcc 156  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||    
T  48984145 agcagacccgtttctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccactagtactactgcc 48984046  T
Q  157 ctccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggg 255  Q
    ||||        ||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  48984045 ctccaatttttttttaatacccccaaccattttttgtacccttgttttagccttttaggcctattagaattaagtcctcttacttttggtgttaggtggg 48983946  T
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgc 355  Q
    |||| |||||||||||||| || |||||||||||||||||||| |||||||||  || |||||||||||||||||||||||||||||||||||||||||     
T  48983945 ggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatata--cgacaccttatatttatcttttaaaaaatataaatagatcattgt 48983848  T
Q  356 ttttt-----nnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||               |||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48983847 tttttttaaaaaaaaaaaaatacgttttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 48983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 60 - 442
Target Start/End: Complemental strand, 10329709 - 10329327
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    ||||||||  ||||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||          |||||||||||||||||||||||    
T  10329709 caggcccggtcctgagggggtgcaaacagttcaacagcgctaggtctccctcagtcatgggcctcaattttttttttaatacccactagtactactgccc 10329610  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||    
T  10329609 tccaatattt-tttaatacccccagccattttttgtccccttgttttagccttttacgcctattagaattaggtcctcttgcttttggtgttaagtgggg 10329511  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    |||||||||||||||||| ||||||||||||||||||| | |  ||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  10329510 gtttctcatgtatacggtagtcattttcacctttgggttttcctcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgct 10329413  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||          |||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  10329412 tttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggaacggccctg 10329327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 60 - 442
Target Start/End: Complemental strand, 47985268 - 47984885
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| |||||||||    
T  47985268 caggcccggccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccactagtattactgccct 47985169  T
Q  159 ccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
    ||        ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  47985168 ccaattttt-tttaatatccccagccattttctgtccccttgttttagtcttttaggcctattagaattaggtcctcttgctttttgtgttaggtggggg 47985070  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt-aaaaaatataaatagatcattgc- 355  Q
    || |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| |||||| |||||||||||||||| ||||||     
T  47985069 ttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttttcttttaaaaaaatataaatagaacattgct 47984972  T
Q  356 tttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||           ||||||||||||||||||||   ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  47984971 tttttaaaaaaaaaacacgttttgattttatcactggcatcttttcattcccagagccgagccaacgaattcttagggacggccctg 47984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 72 - 444
Target Start/End: Complemental strand, 23551359 - 23550986
Alignment:
Q  72 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccctccnnnnnnnnt 169  Q
    |||||||||||||||||||||| |||| ||| ||||||||| |||||||||||||          ||||||||||||||||||||||||||        |    
T  23551359 tgagggggtgcaaacagctcaatagagttggacctccctcaatcatgggcctcaattttttttttaatacccactagtactactgccctccaaaaaaaat 23551260  T
Q  170 ttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgta 268  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  23551259 ttaatacccctagccattttttgtccccttgttttagctttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgta 23551160  T
Q  269 tacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt-aaaaaatataaatagatcattgctttttnnnnnnn 367  Q
    |||||| ||||||||||||||||| ||||| |||||||||  || ||||||||||||||||||| ||||||||||||||||||||||||||||           
T  23551159 tacggtagtcattttcacctttggatgtaccgcatatata--cgacaccttatatttatcttttaaaaaaatataaatagatcattgcttttt-ttaaaa 23551063  T
Q  368 nnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
       || ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  23551062 aaatatgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacgaccctgat 23550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 59 - 442
Target Start/End: Complemental strand, 24525985 - 24525599
Alignment:
Q  59 gcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgcc 156  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||    
T  24525985 gcaggcccagccctgagggggtgcaaacagctcaacagagctgggcctcccttagtcatgggcctcaattttttttttaatacccactagtactactgcc 24525886  T
Q  157 ctccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggg 255  Q
    ||||        |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  24525885 ctccaattttt-tttaatacccccagccattttctgcccccttgttttagccttttaggcatattagaattaggtcctcttgcttttggtgttaggtggg 24525787  T
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgc 355  Q
    |||| |||||||||||||| ||||||||||| ||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  24525786 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgc--atatacacggcaccttatatttatcttttaaaaaatataaatagaacattgt 24525689  T
Q  356 tttt---tnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||              ||||||||||||||||||| |  |||||||||||| |||||| ||||||||||||||||||||||| |||||    
T  24525688 ttttaaaaaaaaaaaaaatacgttttgattttatcacaggcctcttttcattcccagagccgagcctccgaattcttagggacgaccctg 24525599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 60 - 442
Target Start/End: Original strand, 19691897 - 19692279
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtca-tgggcctcaannnnnnnn-aatacccactagtactactgccc 157  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||         |||||| ||||||| ||||| ||    
T  19691897 caggcccgaccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcaatgggcctcaatttttttttaataccaactagtattactgtcc 19691996  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || | ||    
T  19691997 tccatttttt-tttaatacccccaaccattttctgtccccttgttttagtcttttaggcctattagaattaggtcctcttgcttttggtgttaggcgagg 19692095  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| ||||||||||||   ||||||||||||||| ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||| |||||||    
T  19692096 gttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatata--tggcaccttatatttatcttttaaaaaatataaatagaacattgct 19692193  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
     |||          |||||||||||||||||||||  | |||||||||  |||||| |||| |||||||||||||||| |||||||    
T  19692194 cttttaaaaaaaaatacgttttgattttatcactggacacttttcatttccagagccgagcttccgaattcttagggagggccctg 19692279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 60 - 442
Target Start/End: Complemental strand, 38415174 - 38414793
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||         |||||||||||||| || ||||||    
T  38415174 caggcccggctctgaggggatgcaaacagctcaacagagctgggcctcccttagtcatgggcctcaaattttttttaatacccactagtattattgccct 38415075  T
Q  159 ccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
    ||        |||||||||| |||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38415074 ccaattttt-tttaataccctcagccattttctattcccttgttttagtcttttaggcctattagaattaggtcctcttgcttttggtgttaggtggggg 38414976  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctt 357  Q
    || ||||||||||| || |||||||||||||||||||||||  ||||||||  || ||||||||||||||||||||||||||| ||||||| | |||||     
T  38414975 ttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatata--cgtcaccttatatttatcttttaaaaaatacaaatagaacgttgctc 38414878  T
Q  358 tttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||          |||||||||||||||| |||  ||||||||||||  |||||  ||||||||||||||||||||||| |||||    
T  38414877 ttttgcaaaaaaatacgttttgattttatgactagtctcttttcatttccagagtcgagcctccgaattcttagggacgaccctg 38414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 194 - 442
Target Start/End: Original strand, 25010371 - 25010611
Alignment:
Q  194 ccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgg 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  25010371 ccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgg 25010470  T
Q  293 gtgtacggcatatatacccggcaccttatatttatctttt--aaaaaatataaatagatcattgc-tttttnnnnnnnnnntacgttttgattttatcac 389  Q
    |||||            ||| |||||||||||||||||||  ||||||||||||||||||||||| |||||          |||||||||||||||||||    
T  25010471 gtgta------------ccgccaccttatatttatcttttaaaaaaaatataaatagatcattgcttttttttttaaaaaatacgttttgattttatcac 25010558  T
Q  390 tgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||  |||||||||||  |||||| |||||||||||||||||||||||||||||    
T  25010559 tggcctcttttcatttccagagccgagcctccgaattcttagggacggccctg 25010611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 191 - 439
Target Start/End: Complemental strand, 8171706 - 8171460
Alignment:
Q  191 tgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctt 289  Q
    ||||| |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||||| ||     
T  8171706 tgtcctcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctc 8171607  T
Q  290 tgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcac 389  Q
    ||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          |||| ||||||||||||||    
T  8171606 tgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgctttgattttatcac 8171510  T
Q  390 tgctctcttttcattctcagagctgagcctccgaattcttagggacggcc 439  Q
    ||  |||||||||||| |||||| ||||||||||||||| ||||||||||    
T  8171509 tgacctcttttcattcccagagccgagcctccgaattctcagggacggcc 8171460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 169 - 440
Target Start/End: Original strand, 8239598 - 8239869
Alignment:
Q  169 tttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtg--ggggtttctcat 265  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  |||||| |||||    
T  8239598 tttaatacccccaaccatttgttgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaagtggaggggttcctcat 8239697  T
Q  266 gtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnn 365  Q
     ||||||||  |||||||||| |||||||||||  ||||||||  |||||| |||||||||| |||||||||||||||||||| |||| || |||         
T  8239698 atatacggtaatcattttcacatttgggtgtaccacatatata--cggcacattatatttattttttaaaaaatataaatagaacattactcttt-taaa 8239794  T
Q  366 nnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccc 440  Q
         |||||||| ||||||||| ||  |||||||||||  |||||| |||||||| ||||||||||||||||||    
T  8239795 aaaaatacgttttcattttatcattggcctcttttcatttccagagccgagcctccaaattcttagggacggccc 8239869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 18776916 - 18776683
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||    
T  18776916 cttttaggattattagaattagttcctcttgtttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatata 18776817  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    ||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          ||  |||||||||||||||||  |||||||||||      
T  18776816 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaattatattttgattttatcactgacctcttttcatttc 18776719  T
Q  407 cagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||| ||||||||||||||| |||||||||||||    
T  18776718 cagagccgagcctccgaattctcagggacggccctg 18776683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 220 - 442
Target Start/End: Original strand, 29077184 - 29077404
Alignment:
Q  220 ttagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcacct 318  Q
    |||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| | ||||||| |||||||||  || |||||    
T  29077184 ttagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatata--cgacacct 29077281  T
Q  319 tatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcc 418  Q
    | |||||||||||||||||||||||||||| ||||||| |||          |||||||||||||||||||||  |||||||||||| |||||| |||||    
T  29077282 tgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcc 29077380  T
Q  419 tccgaattcttagggacggccctg 442  Q
    |||||||||| |||||||||||||    
T  29077381 tccgaattctcagggacggccctg 29077404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 240 - 442
Target Start/End: Complemental strand, 12596405 - 12596207
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||| ||||||| ||||||||||||| |||||||||  ||||||||  ||||||||| ||||||||||| ||||||    
T  12596405 ttttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatata--cggcaccttgtatttatctttaaaaaaa 12596308  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| ||| |||           ||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||    
T  12596307 tataaatagaacatcgctctttaaaaaaaa---acgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggc 12596211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 277 - 442
Target Start/End: Original strand, 26254015 - 26254178
Alignment:
Q  277 tcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgtt 376  Q
    ||||||||| |||||||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||| ||||||| |||          || |||    
T  26254015 tcattttcatctttgggtgtaccgcatatatac--ggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaatatgtt 26254112  T
Q  377 ttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||||||||  |||||||||||| || ||| ||||||||||||||| |||||| ||||||    
T  26254113 ttgattttatcactgacctcttttcattcccaaagccgagcctccgaattctcagggacagccctg 26254178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 10955468 - 10955575
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||| || |||||| |||||||||  ||||||||||||||||||||||||||||    
T  10955468 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatata--cggcaccttatatttatcttttaaaaaa 10955565  T
Q  339 tataaataga 348  Q
    ||||||||||    
T  10955566 tataaataga 10955575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 442
Target Start/End: Original strand, 28749716 - 28749895
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttt 359  Q
    |||||||||||||| || |||||||| | || |||||| ||||||||||  |||||||| |||||||||||| |||||||||||||||  |||||| |||    
T  28749716 ctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatac--ggcaccttgtatttatcttttcaaaaatataaatagaatattgctcttt 28749812  T
Q  360 tnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |          || ||||||||||||||| || ||||||||||||| |||||| ||||||||||||| | |||||||||||||    
T  28749813 tgaaaaaaaaatatgttttgattttatcattggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 28749895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 160
Target Start/End: Original strand, 25010254 - 25010354
Alignment:
Q  61 aggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa-nnnnnnnnaatacccactagtactactgccctc 159  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||    
T  25010254 aggcccggccctgagggggtacaaacagctcaacagagttgggcctccctcagtcatgggcctcaatttttttttaatacccactagtactactgccctc 25010353  T
Q  160 c 160  Q
    |    
T  25010354 c 25010354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 278 - 441
Target Start/End: Complemental strand, 33162418 - 33162257
Alignment:
Q  278 cattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttt 377  Q
    ||||||||||||| ||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||| ||||||| |||          |||||||    
T  33162418 cattttcacctttaggtgtaccgcatatatac--ggcaccttgtatttatcttttaaaaaatataaatagagcattgctctttaaaaaaaaaatacgttt 33162321  T
Q  378 tgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccct 441  Q
    | ||||||||| ||  ||||||||| || |||| | ||  ||||||||||||||| | ||||||    
T  33162320 taattttatcattgacctcttttcactcccagaaccgaatctccgaattcttaggaatggccct 33162257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 347
Target Start/End: Complemental strand, 9021896 - 9021812
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatag 347  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||  |||||| || ||||||||||||||||||| |||||||    
T  9021896 ctcatgtatacggtagtgattttcacctttgggtgtaccgcatatata--cggcacattgtatttatcttttaaaaaatttaaatag 9021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 354
Target Start/End: Complemental strand, 6765771 - 6765686
Alignment:
Q  267 tatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||| || |||||||||||||| |||||||| |||||||  | |||||| ||||||||||||||||||| |||||||| |||||    
T  6765771 tatacggtagtgattttcacctttggatgtacggcttatatac--gacaccttgtatttatcttttaaaaaatttaaatagaacattg 6765686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 2611363 - 2611267
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| ||||||||||| || || ||||||||| ||| |||||| ||||||||||  | |||||| ||||||||||||||||||| |||||||| |||||    
T  2611363 ggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatac--gacaccttgtatttatcttttaaaaaatttaaatagaacattg 2611267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 23859079 - 23859169
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||||||||||||| || ||||||| |||||||||||  |||||||||  ||| || || ||||||||||||||||||| |||||||| ||||    
T  23859079 ctcatgtatacggtagtaattttcatctttgggtgtatcgcatatata--cggtacattgtatttatcttttaaaaaatttaaatagaacatt 23859169  T

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Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 12596489 - 12596443
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  12596489 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctca 12596443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 7398380 - 7398420
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  7398380 ttttaggcctattagaattgggtcctcttgcttttggtgtt 7398420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 17800394 - 17800354
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  17800394 ttttaggcctattagaattgggtcctcttgcttttggtgtt 17800354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 28749587 - 28749647
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  28749587 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 28749647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 7398452 - 7398548
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||| ||| || |||||||||||| ||||||   ||||||||   |||||||| ||||||||||| ||||||| |||||||| |||||    
T  7398452 ggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatat--ggcaccttgtatttatctttcaaaaaatttaaatagaacattg 7398548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 18777078 - 18777019
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||   ||||||||||    
T  18777078 cgtccctgaggaggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 18777019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 36891579 - 36891674
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||| |||||||||||||| || |||||||||||||| ||||| | ||||||||    ||| || |||| ||| ||||||||||||||||||| ||||    
T  36891579 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaa--cacattgtattcatcatttaaaaaatataaatagaacatt 36891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 40357368 - 40357311
Alignment:
Q  371 tacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattct 428  Q
    |||||||||||||||||||||  || ||||||||  |||||| |||||||||||||||    
T  40357368 tacgttttgattttatcactgaccttttttcatttccagagccgagcctccgaattct 40357311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 23744808 - 23744893
Alignment:
Q  267 tatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||| || ||||| | |||| ||||||| |||||||| |  |||||||| ||||||||||||||||||| ||| |||| |||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgc--ggcaccttgtatttatcttttaaaaaatttaattagaacattg 23744893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 23859002 - 23859042
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  23859002 ttttaggcctattagaattgggtcctcttgcatttggtgtt 23859042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 442
Target Start/End: Original strand, 10955605 - 10955671
Alignment:
Q  376 tttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||| |||||||  |||| ||||||| | |||||||||||||||||||| | |||| ||||||    
T  10955605 tttgatttaatcactgacctctattcattccccgagctgagcctccgaattctcatggacagccctg 10955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 12981327 - 12981422
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||| ||||| ||||| || || ||||||||||||| |||||| || ||||||   || ||||| ||||||||||||||||||  |||||||| ||||    
T  12981327 ggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatat--ggaaccttgtatttatcttttaaaaaaattaaatagaacatt 12981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 36903020 - 36902929
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||||||||| ||  | |||||||||||| |||||||  ||||||||  || || ||| ||||||||| ||||||||| |||||||| |||||    
T  36903020 ctcatgtatacagtactgattttcacctttaggtgtacaacatatata--cgacatcttgtatttatctattaaaaaatttaaatagaacattg 36902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 9939491 - 9939442
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||| ||| ||||| || |||||||||||||| |||||||||||||||||    
T  9939491 cagggccggccctggggaggtgcaaacagctctacagagctgggcctccc 9939442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 10027618 - 10027667
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||| ||| ||||| || |||||||||||||| |||||||||||||||||    
T  10027618 cagggccggccctggggaggtgcaaacagctctacagagctgggcctccc 10027667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 10955384 - 10955444
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||| |||||||||||||| |||||||  ||| |||||||||||||   |||||||||||    
T  10955384 cgtccttgagggggtgcaaatagctcaaacgagttgggcctccctcaaggatgggcctcaa 10955444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 18201161 - 18201234
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||||||| || |||||||  ||||||||   |||| ||| ||||||| ||||||||||| ||||||||||||||    
T  18201161 attttcacccttaggtgtaccacatatatat--ggcatcttgtatttatattttaaaaaatttaaatagatcattg 18201234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 26917855 - 26917815
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  26917855 ttttaggcttattagaattgggtcttcttgcttttggtgtt 26917815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 27237468 - 27237428
Alignment:
Q  314 caccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  27237468 caccttgtatttatcttttaaaaaatttaaatagaacattg 27237428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 27237596 - 27237556
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||| |||||||| |||||||    
T  27237596 ttttaggcctattagaattgggtcatcttgcttatggtgtt 27237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 60 - 443
Target Start/End: Original strand, 44708282 - 44708665
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||| |||||||||||||||| |    
T  44708282 caggcccggctctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaattttttttttaatatccactagtactactgctc 44708381  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  44708382 tccaatttttttttaatacccccagccattttatgtccccttgttttagccttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggg 44708481  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||||||||| ||||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||| |||| ||    
T  44708482 gttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatata--cggcaccttatatttatcttttaaaaaatataaatagaacatttct 44708579  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
    ||||          |||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  44708580 tttt-ttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagttgagcctccgaattcttagggacggctctga 44708665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 60 - 442
Target Start/End: Complemental strand, 50939534 - 50939152
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccct 158  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||    
T  50939534 caggcccgtccctgaggaggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccaccagtactactgccct 50939435  T
Q  159 ccnnnnnnnnttt-aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    ||        ||| |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||    
T  50939434 ccaattttttttttaataaccccagccattttctgtctccttgttttagtcttttaggcctattagaattaggtccttttgcttttggtgttaggcgggg 50939335  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||||||||| |||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  50939334 gttcctcatgtatacggtagtcatttttacctttgggtgtac--catatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgct 50939237  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||          |||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  50939236 tttt-ttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcccccgaattcttagggacggccctg 50939152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 58 - 442
Target Start/End: Complemental strand, 53507185 - 53506802
Alignment:
Q  58 agcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgcc 156  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||    
T  53507185 agcaggcccggccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccactagtactactgcc 53507086  T
Q  157 ctccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggg 255  Q
    ||||        ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  53507085 ctccaattttt-tttaatacccccaaccattttatgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtggg 53506987  T
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg- 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||| |||||     
T  53506986 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cggtaccttatatttatcttttaaaaaatataaatagaacattgt 53506889  T
Q  355 ctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
     |||||          || ||||||||||||||||||  |||| ||||||| |||||| |||||| |||||||||| |||||||||||    
T  53506888 ttttttaaaaaaaaaatatgttttgattttatcactggcctctcttcattcccagagccgagccttcgaattctta-ggacggccctg 53506802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 60 - 442
Target Start/End: Complemental strand, 34290940 - 34290554
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn---aatacccactagtactactgcc 156  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||           |||| |||||||||||||||||    
T  34290940 caggcccgaccctgagggggtgcaaacagctcaacagagttgggcctccctcaggcatgggcctcaatttttttttttaatatccactagtactactgcc 34290841  T
Q  157 ctccnnnnnnnnttt--aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtg 253  Q
    ||||        |||  |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  34290840 ctccaatttttttttttaatacccccaaccattttatgtccccttgttttagccttttaggcctattagaattaggtcctcttgtttttggtgttaggtg 34290741  T
Q  254 ggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  34290740 ggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacatt 34290643  T
Q  354 gctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    | |||||          |||||||||||||||||||||   ||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  34290642 gtttttttaaaaaaaaatacgttttgattttatcactgacttcttttcattcccagagccgagcctccgaattcttaaggacggccctg 34290554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 60 - 442
Target Start/End: Complemental strand, 43207540 - 43207157
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||| ||||||||    
T  43207540 caggcccggtcctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaattttttttttaatacccactagtattactgccc 43207441  T
Q  158 tccnnnnnnnnttt--aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgg 254  Q
    |||        |||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  43207440 tccaatttttttttttaatacccccagccattttctgtccccttgttttagtcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgg 43207341  T
Q  255 gggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||| |||||||||||||| ||||||||||||||| | ||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  43207340 gggttcctcatgtatacggtagtcattttcaccttt-gatgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattg 43207244  T
Q  355 ctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    || |||          |||||||| | ||||||||||  |||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  43207243 ctcttt-taaaaaaaatacgtttttaatttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccctg 43207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 70 - 442
Target Start/End: Complemental strand, 54407447 - 54407073
Alignment:
Q  70 cctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccctccnnnnnnnn 168  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||         |||||| |||||||||||||||||||            
T  54407447 cctgaggaggtgcaaacagctcaacagagttgggcctccctcagtcatgggcctcaatttttttttaatacctactagtactactgccctccaatttttt 54407348  T
Q  169 tttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgt 267  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||    
T  54407347 tttaatacccccagctattttctgtccccttcttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttact-atgt 54407249  T
Q  268 atacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg---ctttttnnnn 364  Q
    ||||||| ||||||||||||||||| ||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |||||    |||||        
T  54407248 atacggtagtcattttcacctttggatgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgttttttttttaaa 54407151  T
Q  365 nnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
           |||||||||||||||||| |  |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  54407150 aaaaaaaacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 54407073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 60 - 348
Target Start/End: Complemental strand, 9878985 - 9878699
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnnaatacccactagtactactgccctc 159  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||        |||||||||||||| ||||||||||    
T  9878985 caggtccggccctgagggggtgcaaacagctcaacagagctgggcctcccttaatcatgggcctcaattttttttaatacccactagtattactgccctc 9878886  T
Q  160 cnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggt 258  Q
    |        |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  9878885 caattttt-tttaatacccccagccattttctgtccccttgttttagtcttttaggcctattagaattaggtcctcttgcttttggcgttagatgggggt 9878787  T
Q  259 ttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaataga 348  Q
    | || ||||||||| | ||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||||||||||||||||    
T  9878786 tccttatgtatacgatagtcattttcacctttgggtgtaccgcatatata--ctgcaccttatatttatcttttaaaaaatataaataga 9878699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 135 - 443
Target Start/End: Original strand, 37168248 - 37168556
Alignment:
Q  135 aatacccactagtactactgccctccnnnnnnnnttt-aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcc 233  Q
    ||||||||||||||||||||||||||        ||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  37168248 aatacccactagtactactgccctccaattttttttttaatacccccagctattttatgtccccttgttttagccttttaggcctattataattaggtcc 37168347  T
Q  234 tcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt 332  Q
    |||||||||| ||||| |||||| ||| |||||||||||||| ||||||||||||||||||| |||  ||||||||  ||||||||||||||||||||||    
T  37168348 tcttgcttttagtgttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatatata--cggcaccttatatttatctttt 37168445  T
Q  333 aaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagg 432  Q
    |||||||||||||||| ||||| |||||          |||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||||    
T  37168446 aaaaaatataaatagaacattgtttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagg 37168545  T
Q  433 gacggccctga 443  Q
    |||||| ||||    
T  37168546 gacggcgctga 37168556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 58 - 436
Target Start/End: Original strand, 48156940 - 48157310
Alignment:
Q  58 agcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn---aatacccactagtactactg 154  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||           |||||||||||||| || ||    
T  48156940 agcaggcccggccctgagggggtgcaaacagctcaacagagctgggcctccctcaatcatgggcctaaattttattttttaatacccactagtattaatg 48157039  T
Q  155 ccctccnnnnnnnnttt-aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggt 252  Q
    ||||||        ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||  ||    
T  48157040 ccctccaattttttttttaatacccccagccattttctgtccccttgttttagccttttaagcctactagaattacgtcctcttgcttttgatgttaagt 48157139  T
Q  253 gggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcat 352  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||            ||| |||||||||||||||||||||||||||||||||||||||    
T  48157140 gggggttcctcatgtatacagtagtcattttcacctttgggtgta------------ccgccaccttatatttatcttttaaaaaatataaatagatcat 48157227  T
Q  353 tgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacg 436  Q
    ||| ||||          |  ||||||||||||||||||  ||||||| |||| | || | |||||||||||||||||||||||    
T  48157228 tgcatttt-ttttaaaaatgtgttttgattttatcactggcctctttttattcccggaaccgagcctccgaattcttagggacg 48157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 184 - 443
Target Start/End: Complemental strand, 8073512 - 8073256
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttggtgggggtttctcatgtatacggtggtcatttt 283  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    |||||| |||||||||||||| ||||||||    
T  8073512 cattttatgtcctcttgttttagccttttaggcctattagaattagttcctattgcttttggtgttatgtggggttcctcatgtatacggtagtcatttt 8073413  T
Q  284 cacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattt 383  Q
    ||| ||||||||||| |||||||||  || |||||| |||||||||||||||||||||||||||| |||| || |||          |||||||||||||    
T  8073412 cacttttgggtgtaccgcatatata--cgacaccttgtatttatcttttaaaaaatataaatagaacattactcttt-taaaaaaaatacgttttgattt 8073316  T
Q  384 tatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
    ||||||||  |||||||||||  |||||| ||||||||||||||| ||||||||||||||    
T  8073315 tatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccctga 8073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 184 - 441
Target Start/End: Complemental strand, 3954071 - 3953816
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||| | |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||  ||||||    
T  3954071 cattttctgttctcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggttttcattt 3953972  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||| ||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| ||||| || ||          ||| |||| |||    
T  3953971 tcacctctgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaacattg-ttcttttaaaaaaaatacattttaatt 3953875  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccct 441  Q
    |||||||||  |||||||||||  |||||| || |||||||||||| ||||||||||||    
T  3953874 ttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccct 3953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 208 - 443
Target Start/End: Complemental strand, 54619354 - 54619120
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  54619354 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 54619255  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    ||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          || ||||||||||||||| ||   ||||||||||      
T  54619254 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcattggcttcttttcatttc 54619157  T
Q  407 cagagctgagcctccgaattcttagggacggccctga 443  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  54619156 cagagccgagcctccgaattctcagggacggccctga 54619120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 208 - 443
Target Start/End: Complemental strand, 38681244 - 38681010
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| ||||||| || |||||||||||||| ||||||||||||| ||| ||||| ||||| |    
T  38681244 cttttaggattattagaattagttcctcttgattttggtgttaggtggggtttcctcatgtatacggtagtcattttcacctctggatgtaccgcataca 38681145  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    |||  |||||||| |||||||||||||||||||||||||||| ||||||| |||          || ||||||||||||||||||  |||||||||||      
T  38681144 tac--ggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttc 38681047  T
Q  407 cagagctgagcctccgaattcttagggacggccctga 443  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  38681046 cagagccgagcctccgaattctcagggacggccctga 38681010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 36716176 - 36715942
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||  |||| ||||||||||||| ||||||||| ||||||||| |||||||    
T  36716176 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatata 36716077  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattc 405  Q
    |||  |||||||| |||||||||||||||||||||||||||| ||||||| ||||          || ||||| ||||||||||||  |||||||||||     
T  36716076 tac--ggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaataaaaattatgtttttattttatcactggcctcttttcattt 36715979  T
Q  406 tcagagctgagcctccgaattcttagggacggccctg 442  Q
     |||||| ||||||||||||||| |||||||||||||    
T  36715978 ccagagccgagcctccgaattctcagggacggccctg 36715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 27078720 - 27078486
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| || ||||| |||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||    
T  27078720 cttttaggattattagaattagttcatcttgattttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatata 27078621  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgc-tttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattc 405  Q
    ||  |||||| || |||||||||||||||||||||||||||| |||||| |||||          || ||||||||||||||||||  |||||||||||     
T  27078620 ta--cggcactttgtatttatcttttaaaaaatataaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcattt 27078523  T
Q  406 tcagagctgagcctccgaattcttagggacggccctg 442  Q
     ||||||  |||||||||||||| |||||||||||||    
T  27078522 ccagagccaagcctccgaattctcagggacggccctg 27078486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 208 - 442
Target Start/End: Complemental strand, 27084517 - 27084283
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| || ||||| |||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||    
T  27084517 cttttaggattattagaattagttcatcttgattttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatata 27084418  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgc-tttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattc 405  Q
    ||  |||||| || |||||||||||||||||||||||||||| |||||| |||||          || ||||||||||||||||||  |||||||||||     
T  27084417 ta--cggcactttgtatttatcttttaaaaaatataaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcattt 27084320  T
Q  406 tcagagctgagcctccgaattcttagggacggccctg 442  Q
     ||||||  |||||||||||||| |||||||||||||    
T  27084319 ccagagccaagcctccgaattctcagggacggccctg 27084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 240 - 442
Target Start/End: Original strand, 47467671 - 47467872
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||  |||||||||  ||||||||| ||||||||||||||||||    
T  47467671 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatata--cggcaccttgtatttatcttttaaaaaa 47467768  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| ||| |||           ||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||    
T  47467769 tataaatagaacatcgctctttaaaaaaaaaacacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggc 47467868  T
Q  439 cctg 442  Q
    ||||    
T  47467869 cctg 47467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 240 - 442
Target Start/End: Original strand, 21582758 - 21582960
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||  ||||||||| ||||||||||||||||||    
T  21582758 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaa 21582855  T
Q  339 tataaatagatcattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacgg 437  Q
    |||||||| | ||||| | ||||          |||||||||||||||||||||  |||||||||||| || ||| ||||||||||||||| ||||||||    
T  21582856 tataaataaaacattgttcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaagccgagcctccgaattctcagggacgg 21582955  T
Q  438 ccctg 442  Q
    |||||    
T  21582956 ccctg 21582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 240 - 444
Target Start/End: Complemental strand, 53149433 - 53149230
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||||||| |||||||| | || || |||||| ||||||||||  |||||||| ||||||||||||||||||    
T  53149433 ttttggtgttaggtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatac--ggcaccttgtatttatcttttaaaaaa 53149336  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| ||| |||           |||||||||||||||||||| ||||||||||||| | || ||||||||||||||||| || ||||||    
T  53149335 tataaatagaacatcgctcttttaaaaaaaaaaacgttttgattttatcactggtctcttttcattccccgaactgagcctccgaattctcagagacggc 53149236  T
Q  439 cctgat 444  Q
    | ||||    
T  53149235 cgtgat 53149230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 201 - 428
Target Start/End: Original strand, 18372427 - 18372656
Alignment:
Q  201 ttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtac- 298  Q
    |||||||||||||||  |||||||||||| |||||||| |||||||||| | ||||| || |||||||||||||| ||||||||||||| || ||||||     
T  18372427 ttttagccttttaggattattagaattagttcctcttgattttggtgttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtacc 18372526  T
Q  299 ---ggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctct 395  Q
        |||||||||  || |||||| |||||||||||||||||||||||||||| ||||||| |||          |||||||||||||||||||||  ||    
T  18372527 gcgcgcatatata--cgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatacgttttgattttatcactgacct 18372623  T
Q  396 cttttcattctcagagctgagcctccgaattct 428  Q
    |||||||||| ||| |  |||||||||||||||    
T  18372624 cttttcattcccagtgtcgagcctccgaattct 18372656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 254 - 443
Target Start/End: Original strand, 42098803 - 42098990
Alignment:
Q  254 ggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||||| |||||||||||||| ||||||||||||| || || ||| ||||||||||  |||||||| |||||||||||||||||||||||||||| |||     
T  42098803 ggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatac--ggcaccttgtatttatcttttaaaaaatataaatagaacatc 42098900  T
Q  354 gctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
    ||| |||           || |||||||||||||||||  |||||||||||  | ||||||||||| |||||||| ||||||||||||||    
T  42098901 gctcttttaaaaaaaaagacattttgattttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccctga 42098990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 442
Target Start/End: Complemental strand, 50258731 - 50258542
Alignment:
Q  251 gtgggggtttctcatgtatacggtggtcattttcaccttt-gggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagat 349  Q
    ||||||||| |||||| ||||  | |||||||||||| |  |||||||| ||||||||||  | |||||| ||||||| ||||||||||||||||||||     
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatac--gacaccttgtatttattttttaaaaaatataaatagaa 50258634  T
Q  350 cattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||| ||| |||          || |||||||||||||||||| ||||||||| ||| |||||| ||||||||||||||| ||| |||||||||    
T  50258633 catcgctctttttaaaaaaa-tatgttttgattttatcactgatctcttttcgttcccagagccgagcctccgaattctcaggaacggccctg 50258542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 261 - 439
Target Start/End: Original strand, 36605974 - 36606149
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt-aaaaaatataaatagatcattgctttt 359  Q
    |||||||||||||| || ||||||| || ||||||||| ||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||| |     
T  36605974 ctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatac--ggcaccttgtatttatctttttaaaaaatataaatagaacattgctcta 36606070  T
Q  360 tnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggcc 439  Q
    |          |||||||||||||||||||||  |||||||||||  |||||| || |||||||||| | ||||||||||    
T  36606071 t-taaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacggcc 36606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 325
Target Start/End: Complemental strand, 29620539 - 29620423
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  ||||| |||||| |||||||| || ||||||| |||||||||| |||||||||||||| ||||||||||||| ||| | ||| |||||||    
T  29620539 cttttaggattattaaaattagttcctcttgattgtggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctggatataccgcatata 29620440  T
Q  307 tacccggcaccttatattt 325  Q
    ||  ||||||||| |||||    
T  29620439 ta--cggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 442
Target Start/End: Complemental strand, 48720500 - 48720429
Alignment:
Q  371 tacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||||||||||||||||||   |||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  48720500 tacgttttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggccctg 48720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 29620426 - 29620364
Alignment:
Q  380 attttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 48720579 - 48720530
Alignment:
Q  77 gggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  48720579 gggtgcaaacagctcaacagagctgagcttccctcagtcatgggcctcaa 48720530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 50258794 - 50258734
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  50258794 cgtccctgagggggtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctcaa 50258734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 8420353 - 8420425
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||||||| |||||||||||  |||||||||  |||||||| ||||||||||||||||||| |||||||| ||||    
T  8420353 attttcacatttgggtgtacaacatatatac--ggcaccttgtatttatcttttaaaaaatttaaatagaacatt 8420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 36716335 - 36716276
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  36716335 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 36716276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 38681407 - 38681348
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  38681407 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 38681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 3954912 - 3954866
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  3954912 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctca 3954866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 54619511 - 54619454
Alignment:
Q  68 tccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  54619511 tccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 54619454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 26279569 - 26279642
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||||| |||||||||||  ||||||||||  | |||||| ||||||||||||||||||| |||||||| |||||    
T  26279569 attttcatctttgggtgtattgcatatatac--gacaccttctatttatcttttaaaaaatttaaatagaacattg 26279642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 28689461 - 28689368
Alignment:
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    ||||||||||||||||  || |||||||||||||| | ||  |||||||||  ||||||||| ||||||||||||  ||||| |||||||| ||||    
T  28689461 tttctcatgtatacggcagtgattttcacctttggatatatcgcatatata--cggcaccttgtatttatctttttgaaaatttaaatagaacatt 28689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 29598040 - 29598080
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  29598040 ttttaggcctattagaattaggtcatcttgcttttggtgtt 29598080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 49393023 - 49393063
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  49393023 ttttaggcctattagaattaggtcctcttacttttggtgtt 49393063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 354
Target Start/End: Original strand, 49393097 - 49393189
Alignment:
Q  259 ttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||||||||||| || ||||| ||||||||||||||  ||||||||  || | |||| ||||||||||||||||||| |||| ||| |||||    
T  49393097 ttctcatgtatacggtagtaatttttacctttgggtgtac-acatatata--cgacgccttgtatttatcttttaaaaaatttaaagagaacattg 49393189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 27078874 - 27078819
Alignment:
Q  70 cctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  27078874 cctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 27084671 - 27084616
Alignment:
Q  70 cctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  27084671 cctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27084616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 32319234 - 32319162
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||||||||||||||||||| ||||||||||    ||| || ||||||||||||||||||| |||||||| ||||    
T  32319234 attttcacctttgggtgtaccgcatatatacaa--cactttgtatttatcttttaaaaaatttaaatagaacatt 32319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 54574929 - 54574833
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||| ||| || ||||| || ||||||||||| |||||||||  ||| ||||| ||||||| |||| |||||| |||||||| |||||    
T  54574929 ggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatata--cggtaccttgtatttatattttgaaaaatttaaatagaacattg 54574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 29620668 - 29620618
Alignment:
Q  57 cagcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctc 107  Q
    |||||||  ||||||||||||||||||||||||||||  ||||||||||||    
T  29620668 cagcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctc 29620618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 789940 - 790030
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaataga 348  Q
    |||| |||||||||| |||||| ||||| ||||||||||||||  ||||||||   | |||||| |||||||  |||||||||| ||||||||    
T  789940 ggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatata--tgacaccttgtatttattgtttaaaaaatttaaataga 790030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 13795193 - 13795253
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||| |||||| |||||||||||||||  |||||||||||||||||   |||||||||||    
T  13795193 cgtccttgagggcgtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 13795253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 42098704 - 42098764
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  ||| |||||||||| ||   |||||||||||    
T  42098704 cgtccctgagggggtgcaaacagctcaaacgagttgggcctcccacaaggatgggcctcaa 42098764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 52374590 - 52374630
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  52374590 ttttaggcctattagaattgagtcctcttgcttttggtgtt 52374630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 354
Target Start/End: Original strand, 25855435 - 25855521
Alignment:
Q  265 tgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||||| || ||||||| ||||||||| ||  |||||||||  | |||||| |||| |||||||||||||| |||||||| |||||    
T  25855435 tgtatacggtagtgattttcaactttgggtgcactacatatatac--gacaccttgtatt-atcttttaaaaaatttaaatagaacattg 25855521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 53149517 - 53149475
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    ||||||| ||||||||||||||||||||  |||||||||||||    
T  53149517 cgtccctcagggggtgcaaacagctcaaacgagctgggcctcc 53149475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 36605862 - 36605911
Alignment:
Q  76 ggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  36605862 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 36605911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 1148411 - 1148371
Alignment:
Q  69 ccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||||||||||||| ||||||||||  ||||||||||||||    
T  1148411 ccctgagggggtgcgaacagctcaaacgagctgggcctccc 1148371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 8420258 - 8420298
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||| |||||||||| ||| |||||||||||||||||    
T  8420258 ttttaggcatattagaattgggttctcttgcttttggtgtt 8420298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 21582674 - 21582734
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    |||| |||||||||||||||||||||||  ||||||||| ||||| |   |||||||||||    
T  21582674 cgtctctgagggggtgcaaacagctcaaacgagctgggcatcccttaaggatgggcctcaa 21582734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 25373678 - 25373642
Alignment:
Q  72 tgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    |||||||||||||||||||| || |||||||||||||    
T  25373678 tgagggggtgcaaacagctctactgagctgggcctcc 25373642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 32741103 - 32741147
Alignment:
Q  65 ccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    ||||||||| || |||||||||||||| || ||||||||||||||    
T  32741103 ccgtccctggggaggtgcaaacagctctaccgagctgggcctccc 32741147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 42453344 - 42453384
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||||||||||||  |||||||| |||||||||||    
T  42453344 ttttaggcctattagaattgagtcctcttacttttggtgtt 42453384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 47467588 - 47467647
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||| ||||||||||||||  |||||| ||||||||||   |||||||||||    
T  47467588 cgtccctgagggg-tgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaa 47467647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 63 - 442
Target Start/End: Complemental strand, 54083541 - 54083160
Alignment:
Q  63 gcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccctcc 160  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||          |||||||||||||||||||| |||||    
T  54083541 gcccgtccctgagggggtgcaaacagctcaatagagctgggcatccctcagtcatgggcctcaattttttttttaatacccactagtactactgtcctcc 54083442  T
Q  161 nnnnnnnnttt--aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtggggg 257  Q
            |||  |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  54083441 attttatttttttaatacccctagccattttctgtctccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtagggg 54083342  T
Q  258 tttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctt 357  Q
    || |||||||||||||| |||||||| | |||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  54083341 ttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagatcattg-tt 54083245  T
Q  358 tttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||          |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  54083244 ttttttaaaaaaatacgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatttttagggacggccctg 54083160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 58 - 443
Target Start/End: Complemental strand, 37777527 - 37777139
Alignment:
Q  58 agcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn---aatacccactagtactactg 154  Q
    |||||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||           ||||||||||||||||||||    
T  37777527 agcaggcccggccttgagggggtgcaaacagctcaacagagctggacctccctcaatcatgggcctcaatttttttttttaatacccactagtactactg 37777428  T
Q  155 ccctccnnnnnnnnttt-aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggt 252  Q
    ||||||        ||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |    
T  37777427 ccctccaattttttttttaatacctccagctattttctgtccccttgttttagccttttaggcctattagaattaggtcatcttgcttttggtgttagtt 37777328  T
Q  253 gggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcat 352  Q
    | ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |||    
T  37777327 gagggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacat 37777230  T
Q  353 tgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
    | ||||||          |||||||||||||||||||||  |||||||||||| |||||| ||||||||||||| |||||||| |||||||    
T  37777229 tactttttttttaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatttttagggacagccctga 37777139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 71 - 442
Target Start/End: Original strand, 34027399 - 34027768
Alignment:
Q  71 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccctccnnnnnnnn 168  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||          |||||||  | |||||||||||| ||            
T  34027399 ctgagggagtgcaaactgctcaacagagctgggtctccctcagtcatgggcctcaattttttttttaataccctatggtactactgcccgccaatttt-- 34027496  T
Q  169 tttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgt 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  34027497 tttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgt 34027596  T
Q  268 atacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnn 367  Q
    |||| || ||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||           
T  34027597 ataccgtagtcattttcacctttgggtgtaccgcatatata--cgacaccttatatttatcttttaaaaaatataaatagaacattgcttttt-ttaaaa 34027693  T
Q  368 nnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
       |||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  34027694 aaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 34027768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 70 - 442
Target Start/End: Original strand, 32128402 - 32128774
Alignment:
Q  70 cctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccctccnnnnnnn 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||          |||||||||||||| ||||| |||||           
T  32128402 cctgagggggtgcaaacagctcaacagagctgggcctccctcagttatggacctcaattttttttttaatacccactagtattactgtcctccaattttt 32128501  T
Q  168 ntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatg 266  Q
     ||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  32128502 -tttaatacccccagccattttatgtccccttgtttcagtcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggtttcttatg 32128600  T
Q  267 tatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnn 366  Q
    |||||||| ||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||| ||||||| |||          
T  32128601 tatacggtagtcattttcacctttgggtgtaccgcatatata--cgacaccttatatttatcttttaaaaaatataaatagaacattgctcttttaaaaa 32128698  T
Q  367 nnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
        |||||||||||||||||||||  || ||||||||| |||||| |||||||| ||||||||||||||||||||    
T  32128699 aaaatacgttttgattttatcactgaccttttttcattcccagagccgagcctccaaattcttagggacggccctg 32128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 60 - 436
Target Start/End: Complemental strand, 38352554 - 38352189
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||     
T  38352554 caggcccggccctgagggg-tgcaaacagctcaacagagctgggcctcccttagtcatgggcctcaaaaaaaaaattaatacccactagtactactgcct 38352456  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  38352455 tccaatttttttttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggg 38352356  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||| ||||| ||||||||||||||||||||||            ||| |||||||||||||||||||||||||||||||||||||||| ||    
T  38352355 gttcctcatgtacacggtagtcattttcacctttgggtgta------------ccgccaccttatatttatcttttaaaaaatataaatagatcattact 38352268  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacg 436  Q
    ||||          ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  38352267 tttt-aaaaaaaaatacgttttgattttatcactgatctcttttcattcccagagccgagcctccgaattcttagggacg 38352189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 59 - 443
Target Start/End: Original strand, 19498312 - 19498692
Alignment:
Q  59 gcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccc 157  Q
    ||||||||| |||||| |||||||||| |||||||||| |||||||||||| || |||||||||||||         |||||||||||||||||||||||    
T  19498312 gcaggcccggccctgacggggtgcaaatagctcaacagtgctgggcctcccccaatcatgggcctcaatttttttttaatacccactagtactactgccc 19498411  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    |||        ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19498412 tccaattttt-tttaatacccccagccattatctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggg 19498510  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| ||||||||||| || ||||||||||||||||| ||||| |||||||    |||||||||||||||||||||||||||||||||||||| |||||||    
T  19498511 gttcctcatgtatacagtagtcattttcacctttggctgtaccgcatata----cggcaccttatatttatcttttaaaaaatataaatagaacattgct 19498606  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
     |||          |||||||||||||||||| ||  || |||||||||  ||||| |||||||||||||||||| |||||||||||    
T  19498607 cttt-taaacaaaatacgttttgattttatcattggcctgttttcattcctagagccgagcctccgaattcttagtgacggccctga 19498692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 76 - 442
Target Start/End: Original strand, 40089340 - 40089714
Alignment:
Q  76 ggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccctccnnnnnnnntttaat 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||||||||        ||||||    
T  40089340 ggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaatttttttttaatacccactagtactagtgccctccaatttttttttaat 40089439  T
Q  175 acccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacgg 273  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  40089440 accctcagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacgg 40089539  T
Q  274 tggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaa---------aaatataaatagatcattgctttttnnnn 364  Q
    | ||||||||||||||||| ||||| |||||||||  |||||||||||||||||||||||||         ||||||||||| | |||||||||||        
T  40089540 tagtcattttcacctttggatgtaccgcatatata--cggcaccttatatttatcttttaaaaatataaataaatataaataaaacattgcttttt-taa 40089636  T
Q  365 nnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
          |||||||||||||||||||||   |||||||||||  ||||| ||||||||||||||||||||||| |||||    
T  40089637 aaaaaatacgttttgattttatcactgacttcttttcattccaagagccgagcctccgaattcttagggacgaccctg 40089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 72 - 442
Target Start/End: Original strand, 16844839 - 16845210
Alignment:
Q  72 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn---aatacccactagtactactgccctccnnnnnnnn 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||| ||||| |||||            
T  16844839 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaattttttttttaaatacccactagtattactgtcctccaatttttt 16844938  T
Q  169 tttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgt 267  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  16844939 tttaatacccccgaccattttctgtccccttgttttagtcttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggggttcctcatgt 16845038  T
Q  268 atacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt-aaaaaatataaatagatcattgctttttnnnnnn 366  Q
    ||||||| |||||||||||| ||||||||||  ||||||||  || ||||||||||||||||||| |||||||||||||||| ||||||| |||          
T  16845039 atacggtagtcattttcaccgttgggtgtactacatatata--cgacaccttatatttatcttttaaaaaaatataaatagaacattgctcttt-taaaa 16845135  T
Q  367 nnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
        |||||||||||||||||||||  || ||||||||  |||||| |||||||||||||||||||||||||||||    
T  16845136 aaaatacgttttgattttatcactg-gcttttttcatttccagagccgagcctccgaattcttagggacggccctg 16845210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 71 - 442
Target Start/End: Complemental strand, 16882682 - 16882313
Alignment:
Q  71 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn-aatacccactagtactactgccctccnnnnnnnnt 169  Q
    |||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||||         |||||||||||||| |||||||||||        |    
T  16882682 ctgaggaggtgcaaacagctcaacagagctgggcttcccttagtcatgagcctcaatttttttttaatacccactagtattactgccctccaattttt-t 16882584  T
Q  170 ttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgta 268  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | |||  |    
T  16882583 ttaatacccccagctattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgttaggtgagggttccccataca 16882484  T
Q  269 tacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnn 368  Q
    |||||| ||||||||||||||| |||||||  | ||||||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||            
T  16882483 tacggtagtcattttcaccttttggtgtac--cgtatatacacggcaccttatatttatcttttaaaaagtataaatagaacattg-ttttttttaaaaa 16882387  T
Q  369 nntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
      |||||||||||||||||||||   |||||||||||  ||||| |||||||||||||||||||||||||||||    
T  16882386 aatacgttttgattttatcactgacttcttttcattcctagagccgagcctccgaattcttagggacggccctg 16882313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 69 - 360
Target Start/End: Original strand, 24969251 - 24969535
Alignment:
Q  69 ccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccctccnnnnnn 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||          
T  24969251 ccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaattttttttttaatacccactagtactactgccctccaatttt 24969350  T
Q  167 nnttt--aatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctc 263  Q
      |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||    
T  24969351 tttttttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattagatcctcttgcttttggtgttaggtgggggttcctc 24969450  T
Q  264 atgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgcttttt 360  Q
    ||||||||||| ||||||||||||||||||||||            ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24969451 atgtatacggtagtcattttcacctttgggtgta------------ccgccaccttatatttatcttttaaaaaatataaatagatcattgcttttt 24969535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 60 - 442
Target Start/End: Complemental strand, 2791040 - 2790659
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaannnnnnnn--aatacccactagtactactgccc 157  Q
    |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||          || ||||||||||| ||||| ||    
T  2791040 caggcccgactctgagggggtgcaaacagctcaacagagctgggtctccctcagtcatggacgtcaatttttttttgaaaacccactagtattactgtcc 2790941  T
Q  158 tccnnnnnnnntttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggg 256  Q
    | |        ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||   || |||||||    
T  2790940 ttcaattatt-tttaatacccccagccattttatgtccccttgttttagtcttttaggcctattagaattaggtcctcttgcttttgccattaggtgggg 2790842  T
Q  257 gtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||| |||||||||||||| ||||||||||||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||| ||||| |    
T  2790841 gttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cggtaccttatatttatcttttaaaaaatataaatagaacattg-t 2790745  T
Q  357 ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    | ||           | |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  2790744 tcttttaaaaaaaaaatgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagagacggccctg 2790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 169 - 431
Target Start/End: Complemental strand, 43455720 - 43455460
Alignment:
Q  169 tttaatacccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgt 267  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||||| |||||||||| |||||||    
T  43455720 tttaatacccccagccattttctgtccccttgttttagtcttttaggcctatttgaattaggtcctcttactttcggtgttaggtgggggttcctcatgt 43455621  T
Q  268 atacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnn 367  Q
    ||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||           
T  43455620 atacggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt-taaaaa 43455524  T
Q  368 nnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttag 431  Q
       |||||||||||||||||||||  |||||||||||| |||||  ||||||||||||||||||    
T  43455523 taatacgttttgattttatcactgacctcttttcattcccagagtcgagcctccgaattcttag 43455460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 184 - 443
Target Start/End: Original strand, 47128920 - 47129177
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||    
T  47128920 cattttctgtcctcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattt 47129019  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    | |||| ||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| ||||| || ||          ||| ||||||||    
T  47129020 ttacctctgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaacattg-ttcttttaaaaaaaatacattttgatt 47129116  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
    |||||||||  |||||||||||  |||||| ||||||||||||||| ||||||||| ||||    
T  47129117 ttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggctctga 47129177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 191 - 442
Target Start/End: Complemental strand, 34768741 - 34768492
Alignment:
Q  191 tgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctt 289  Q
    ||||| |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||  ||||||||||||     
T  34768741 tgtcctcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctc 34768642  T
Q  290 tgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcac 389  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||| |||          || ||||||||||||||||    
T  34768641 tgggtgtaccgcatatatac--ggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt-taaaaaaaatatgttttgattttatcac 34768545  T
Q  390 tgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |   |||||||||||| || ||| ||||||||||||||| ||||||| |||||    
T  34768544 tagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccctg 34768492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 184 - 442
Target Start/End: Original strand, 48209173 - 48209436
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||| ||||  |||||||||||| || ||||| |||||||||| ||||||||||||||||||||||||| ||||| |    
T  48209173 cattttctgtcctcttgttttagccttataggattattagaattagttcttcttgattttggtgttaggtgggggtttctcatgtatacggtagtcatat 48209272  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgttttgat 381  Q
    |||| | ||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||| ||||          |||||||||||    
T  48209273 tcacatctgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaaatacgttttgat 48209370  T
Q  382 -----tttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
         |||||||||| |||||||||| || |||||| ||||||||||||||| |||||||||||||    
T  48209371 tttaatttatcactggtctcttttcactcccagagccgagcctccgaattctcagggacggccctg 48209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 184 - 442
Target Start/End: Original strand, 10978833 - 10979092
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||| | |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||    
T  10978833 cattttctgttctcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattt 10978932  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg--ctttttnnnnnnnnnntacgttttga 380  Q
    |||| | ||||||||| |||||||||  || |||||| |||||||||||||||||||||||||||| |||||  |||||           ||||||||||    
T  10978933 tcacttctgggtgtaccgcatatata--cgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaaaatacgttttga 10979030  T
Q  381 ttttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||||||||   |||||||||||| ||||||| | |||||||||||| || ||||||||||    
T  10979031 ttttatcactaacctcttttcattcccagagctaaacctccgaattctcagagacggccctg 10979092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 54780777 - 54780968
Alignment:
Q  250 ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagat 349  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||||| ||||||||||||||||||||||||||||     
T  54780777 ggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaa 54780874  T
Q  350 cattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||||| ||||          |||||||||||||||||||||  |||||||||||| ||||||  |||||||||||||| |||||||||||||    
T  54780875 cattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggccctg 54780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 184 - 428
Target Start/End: Original strand, 35465040 - 35465281
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| || |||||||||||||| || ||||    
T  35465040 cattttctgtcctcttgttttagccttttaggcctattagaattaggtcatgttgcttttggtgttaggtggggattcctcatgtatacggtagttattt 35465139  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||| ||| ||||||| ||||||||||   ||||||| |||||||||| ||||||||||||||| | ||||| || ||          || |||||||||    
T  35465140 tcacttttaggtgtaccgcatatatac---gcaccttttatttatcttgtaaaaaatataaatataacattg-ttcttttaaaaaaaatatgttttgatt 35465235  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattct 428  Q
    |||||||||  |||||||||||| ||||   |||||||||||||||    
T  35465236 ttatcactgacctcttttcattcccagaatcgagcctccgaattct 35465281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 208 - 428
Target Start/End: Complemental strand, 38209741 - 38209522
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  38209741 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 38209642  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
    ||  ||||||||| |||||||||||||||||||||||||||| ||||||| |||          ||  |||||||||||||||||  |||||||||||      
T  38209641 ta--cggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaaaaaaattatattttgattttatcactggcctcttttcatttc 38209544  T
Q  407 cagagctgagcctccgaattct 428  Q
    |||||| |||||||| ||||||    
T  38209543 cagagccgagcctccaaattct 38209522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 184 - 444
Target Start/End: Complemental strand, 35779499 - 35779243
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||  |||| ||||||||||||||  ||||||    
T  35779499 cattttctgccctcttgttttagccttttaggcctattagaattagttcctcttgcttttgatgttaggtgaaggttcctcatgtatacggtaatcattt 35779400  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    |||||||||||||||| |||||||||  || |||||| ||||||||||||||||||||| |||||| ||||||| |||          ||||||||||||    
T  35779399 tcacctttgggtgtaccgcatatata--cgacaccttgtatttatcttttaaaaaatat-aatagaacattgctcttt--aaaaaaaatacgttttgatt 35779305  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctgat 444  Q
    ||||||||   ||||||||||||   |||  || |||||||||||| | |||||||| ||||    
T  35779304 ttatcactagcctcttttcattcctcgagtcgaacctccgaattctcaaggacggccttgat 35779243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 442
Target Start/End: Complemental strand, 10428379 - 10428116
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcat-- 280  Q
    |||||||||||| |||||||||||||||||||  ||||| |||||| |||||||| |||||||||| ||||| |||| |||||||||||||| |||||      
T  10428379 cattttctgtcctcttgttttagccttttaggattattataattagttcctcttgattttggtgttaggtggaggttcctcatgtatacggtagtcattt 10428280  T
Q  281 ------tttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacg 374  Q
          |||||||| ||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| |||||||||||          ||      
T  10428279 tcacaatttcacctctgggtgtaccgcatatata--cggcaccttgtatttatcttttaaaaaatataaatagaacattgcttttt--aaaaaaaataaa 10428184  T
Q  375 ttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||||||||| |||||  |||||||||||| |||||| |||||||||||||||   |||||||||||    
T  10428183 ttttgattttagcactgacctcttttcattcccagagccgagcctccgaattctcgaggacggccctg 10428116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 13460140 - 13460303
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||  |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| || ||||||||||| |||||||    
T  13460140 cattttctgtcttcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggttccttatgtatacggtagtcattt 13460239  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaataga 348  Q
    |||| | ||||| ||| |||||||||  || |||||| ||||||||||||||||||||||||||||    
T  13460240 tcacatctgggtataccgcatatata--cgacaccttgtatttatcttttaaaaaatataaataga 13460303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 240 - 442
Target Start/End: Original strand, 32915374 - 32915575
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| ||||||||||||||  ||||||| |||| |||||||||  |||||||||  |||||||| ||||||||||||||||||    
T  32915374 ttttggtgttaggtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatac--ggcaccttgtatttatcttttaaaaaa 32915471  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| ||| ||| |||            |||||||||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||    
T  32915472 tataaatagaacatcgctcttttaaaaaaaaaaccgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggc 32915571  T
Q  439 cctg 442  Q
    ||||    
T  32915572 cctg 32915575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 208 - 442
Target Start/End: Original strand, 55255226 - 55255447
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatata 306  Q
    ||||||||  |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||               
T  55255226 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtg----------- 55255314  T
Q  307 tacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattct 406  Q
        ||||||||| ||||||||||||||||||||||||| || ||||||| |||          || ||||||||||||||||||  ||||||||||| |    
T  55255315 ---gcggcaccttgtatttatcttttaaaaaatataaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttt 55255411  T
Q  407 cagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||| ||||||||||||||| |||||||||||||    
T  55255412 cagagccgagcctccgaattctcagggacggccctg 55255447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 23509972 - 23509846
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||||||||| |||||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| ||||||| |||||| |||||||    
T  23509972 cattttctgtcctcttgttttagccttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtctacggtagtcattt 23509873  T
Q  283 tcacctttgggtgtacggcatatatac 309  Q
    |||||| | ||||||| ||||||||||    
T  23509872 tcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 240 - 442
Target Start/End: Original strand, 37514648 - 37514848
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| ||||||| ||  ||||||||||||| ||||||||||||| || |||||| ||||||||||  |||||||| ||||||||||||||||||    
T  37514648 ttttggtgttaggtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatac--ggcaccttgtatttatcttttaaaaaa 37514745  T
Q  339 tataaatagatcattgct-ttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacgg 437  Q
    |||||||||| ||| ||| |||           |||||||||||||||||||||  |||||||||||| |   ||||||||||| |||||| ||||||||    
T  37514746 tataaatagaacatcgctctttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattccc--cgctgagcctccaaattctcagggacgg 37514843  T
Q  438 ccctg 442  Q
    |||||    
T  37514844 ccctg 37514848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 240 - 442
Target Start/End: Complemental strand, 5128960 - 5128758
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||| || |||||||||  ||||||||| ||||||||||||||||||    
T  5128960 ttttggtgttaggtggaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatata--cggcaccttgtatttatcttttaaaaaa 5128863  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgtttt-gattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacgg 437  Q
    ||||||||||  || ||| ||            ||||||| |||||||||||||  |||||||||||| |||||| |||||||  |||||| ||||||||    
T  5128862 tataaatagaatatcgctcttctaaaaaaaaaaacgttttagattttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacgg 5128763  T
Q  438 ccctg 442  Q
    |||||    
T  5128762 ccctg 5128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 443
Target Start/End: Original strand, 1105521 - 1105722
Alignment:
Q  240 ttttggtgtt-ggtgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||||||||| |||||||||| |||||||||| ||| ||||||||||||| | ||||||| |||||||||  ||  ||||| ||||||||||||||||||    
T  1105521 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatata--cgataccttgtatttatcttttaaaaaa 1105618  T
Q  339 tataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggc 438  Q
    |||||||||| |||  || |||          |||||||||||||||||||||  |||||||||||| |||||| ||||||| ||||||| | |||||||    
T  1105619 tataaatagaacatcactcttt-taaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 1105717  T
Q  439 cctga 443  Q
     ||||    
T  1105718 tctga 1105722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 442
Target Start/End: Original strand, 17679432 - 17679589
Alignment:
Q  282 ttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgat 381  Q
    ||||||| ||||||||| ||||||||||  |||||||| ||||||||||||||||||||||||||||  |||||| |||          |||||||||||    
T  17679432 ttcacctctgggtgtaccgcatatatac--ggcaccttgtatttatcttttaaaaaatataaatagaatattgctcttttaaaaaaaa-tacgttttgat 17679528  T
Q  382 tttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||| ||||||||||||| |||| | ||||||||||||||| || ||||||||||    
T  17679529 tttatcactggtctcttttcattcccagaaccgagcctccgaattctcagagacggccctg 17679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 442
Target Start/End: Complemental strand, 16922409 - 16922245
Alignment:
Q  277 tcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-ttttnnnnnnnnnntacgt 375  Q
    |||||||||||||||||  ||| ||||||||||  | ||| ||||||||||||||||||||||||||||||| ||||||| ||||           ||||    
T  16922409 tcattttcacctttggggatactgcatatatac--gacactttatatttatcttttaaaaaatataaatagaacattgctcttttaaaaataaaaaacgt 16922312  T
Q  376 tttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||||||||| ||||||||||||| || ||  |||||||| |||||| |||||||||||||    
T  16922311 tttgattttatcactggtctcttttcattcccaaagtcgagcctccaaattctcagggacggccctg 16922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 340
Target Start/End: Complemental strand, 4167992 - 4167910
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaata 340  Q
    |||| |||||||||| ||| || |||||||||||||||||||  |||||||||  ||||||||| ||||||||||||||||||||    
T  4167992 ggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatata--cggcaccttgtatttatcttttaaaaaata 4167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 443
Target Start/End: Original strand, 24969716 - 24969787
Alignment:
Q  372 acgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctga 443  Q
    |||||||| ||||||||||   |||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  24969716 acgttttgtttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccctga 24969787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 52468292 - 52468388
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||| ||||||| || |||||||||||||| ||||   |||||||||  |||||||| ||||||||||||||||||| |||||||| |||||    
T  52468292 ggttcctcatgcatacggtagtgattttcacctttggatgtataacatatatac--ggcaccttgtatttatcttttaaaaaatttaaatagaacattg 52468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 10431502 - 10431442
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  10431502 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 10431442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 24396940 - 24397028
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaata 346  Q
    |||| |||||||||||| | || ||||||||||||| |||||   |||||||||   ||||||||||||||||||||||||||| ||||||    
T  24396940 ggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatact--gcaccttatatttatcttttaaaaaatttaaata 24397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 36118559 - 36118463
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||||| || |||||||  ||||||||||   |||||||||  | |||||| ||||||||||||||||||| |||||||| |||||    
T  36118559 ggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatac--gacaccttgtatttatcttttaaaaaatttaaatagaacattg 36118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 426
Target Start/End: Original strand, 51964736 - 51964884
Alignment:
Q  278 cattttcacctttgggtgtacggcatatatacccggcaccttatatttatctttt---aaaaaatataaatagatcattgctttttnnnnnnnnnntacg 374  Q
    ||||||||||| ||||||||  |||||||||  ||||||||| ||||||||||||   |||||||||||||||| ||||||| |||          ||||    
T  51964736 cattttcacctctgggtgtatcgcatatata--cggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctcttt-taaaaaaaatacg 51964832  T
Q  375 ttttgattttatcactgctctcttttcattctcagagctgagcctccgaatt 426  Q
    ||||||||||||||  |  |||||||||||| |||||| ||| |||||||||    
T  51964833 ttttgattttatcatcggcctcttttcattcccagagccgagtctccgaatt 51964884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 55255086 - 55255145
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  55255086 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 55255145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 444
Target Start/End: Complemental strand, 23508556 - 23508425
Alignment:
Q  314 caccttatatttatcttttaaaaaat-ataaatagatcattgctttttnnnnnnnnnntacgttttgattttatcactgctctcttttcattctcagagc 412  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||  ||          ||| |||||||||||||||||  |||||||||||| || |||    
T  23508556 caccttgtatttatcttttaaaaaattataaatagaacattgctcattaaaaaaaaaatacattttgattttatcactggcctcttttcattcccaaagc 23508457  T
Q  413 tgagcctccgaattcttagggacggccctgat 444  Q
     ||||||||||||| | | |||||| ||||||    
T  23508456 cgagcctccgaattttcatggacggtcctgat 23508425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 35463958 - 35464007
Alignment:
Q  77 gggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||| ||||    
T  35463958 gggtgcaaacagctcaacagagctgggcctcccccagccatgggcatcaa 35464007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 354
Target Start/End: Original strand, 36178684 - 36178774
Alignment:
Q  262 tcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||||||| ||| || |||||||| ||||||||||  ||||||||||  | |||||| ||||||||||||||| ||| |||||||| |||||    
T  36178684 tcatgtataaggtagtgattttcacatttgggtgtatcgcatatatac--gacaccttgtatttatcttttaaataatttaaatagaacattg 36178774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 51691980 - 51691918
Alignment:
Q  292 ggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||||||| ||||||||||  |||||||| ||||||||||||||||||| |||||||| |||||||    
T  51691980 ggtgtaccgcatatatac--ggcaccttgtatttatcttttaaaaaatttaaatagaacattgct 51691918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 54779441 - 54779490
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  54779441 caggcccggccctgagggagtgcaaacagctcaaccgagctgggcctccc 54779490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 17679223 - 17679283
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||   |||||||||||    
T  17679223 cgtccctgagggggtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaa 17679283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 39655332 - 39655259
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||||||||||||||| |||||||| |  || || || ||||||||||||||||||| |||||||| |||||    
T  39655332 attttcacctttgggtgtaccgcatatatgc--ggaactttgtatttatcttttaaaaaatttaaatagaacattg 39655259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 45560764 - 45560704
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  45560764 cgtccttgagggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctcaa 45560704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 47127987 - 47128047
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||   |||||||||||    
T  47127987 cgtccctgagggggtgcaaacagcccaaacgagctgggcctccctcaaggatgggcctcaa 47128047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 27112036 - 27112132
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||||||||||||| || |||||||| ||| ||||||  |||||||||   | |||||| ||||||||||||||||||| ||||| || |||||    
T  27112036 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatata--tgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 27112132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 37745011 - 37744931
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||| |||| ||||||||| || |||||||||||||| ||||  |||||||| |  | |||||||||||||||||||||||||    
T  37745011 ggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgc--gacaccttatatttatcttttaaaaaa 37744931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 5129039 - 5128997
Alignment:
Q  70 cctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  5129039 cctgagggggtgcaaacagctcaaacgagctgggcctccctca 5128997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 32915303 - 32915349
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||    
T  32915303 cgtccctgagggggtgcaaacagctcaaacgagttgggcctccctca 32915349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 37514564 - 37514606
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctcc 108  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  37514564 cgtccctgagggggtgcaaacagctcaaacgagctgggcctcc 37514606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 48208458 - 48208516
Alignment:
Q  68 tccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||   |||||||||||    
T  48208458 tccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaa 48208516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 356
Target Start/End: Complemental strand, 9578708 - 9578667
Alignment:
Q  315 accttatatttatcttttaaaaaatataaatagatcattgct 356  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  9578708 accttgtatttatcttttaaaaaatataaatagaacattgct 9578667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 35780622 - 35780573
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||||||| | | |||||||||||||||||||||| ||||||||||||||    
T  35780622 caggcccggctccgagggggtgcaaacagctcaaccgagctgggcctccc 35780573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 36118631 - 36118590
Alignment:
Q  208 cttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  36118631 cttttaggcctattagaattgggtcatcttgcttttggtgtt 36118590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 40217261 - 40217327
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatag 347  Q
    ||||||| |||||| ||||  ||||||||||  | |||||||||||||||||||||||||| |||||||    
T  40217261 attttcatctttggatgtatcgcatatatac--gacaccttatatttatcttttaaaaaatttaaatag 40217327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 1105445 - 1105497
Alignment:
Q  74 agggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  1105445 agggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 1105497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 2135491 - 2135451
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  2135491 ttttaggcttattagaattgggtcctcttgcttttggtgtt 2135451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 29425252 - 29425187
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaata 346  Q
    ||||||||||||   ||||| ||||||||||  |||||||||||||||| ||||||||||| ||||||    
T  29425252 attttcacctttaaatgtactgcatatatac--ggcaccttatatttattttttaaaaaatttaaata 29425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 37746894 - 37746854
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  37746894 ttttaggcctattagaattgggtcatcttgcttttggtgtt 37746854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 39329565 - 39329525
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  39329565 ttttaggcctattagaatttggtcttcttgcttttggtgtt 39329525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 36362964 - 36362876
Alignment:
Q  264 atgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||||| ||| || |||| ||| ||||||||||  ||||||||||  ||||| || ||||||||||||||||||| |||| ||| |||||    
T  36362964 atgtatatggtagtgatttccacatttgggtgtattgcatatatac--ggcactttgtatttatcttttaaaaaatttaaacagagcattg 36362876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 25887351 - 25887301
Alignment:
Q  59 gcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    ||||| ||| ||||| || |||||||||||||| |||||||||||||||||    
T  25887351 gcagggccggccctggggaggtgcaaacagctctacagagctgggcctccc 25887301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 2135422 - 2135332
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaataga 348  Q
    |||| ||||| |||||| | || || || |||||||| ||||  ||||||||||  | |||||| ||||||||||||||||||| ||||||||    
T  2135422 ggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatac--gacaccttgtatttatcttttaaaaaatttaaataga 2135332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 29690999 - 29690950
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||| ||| ||||| || |||||||||||||| |||||||||||||||||    
T  29690999 cagggccggccctggggaggtgcaaacagctctacagagctgggcctccc 29690950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 35042594 - 35042643
Alignment:
Q  58 agcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcctc 107  Q
    |||||| |||||||||||| |||||||||||||| | | |||||||||||    
T  35042594 agcagggccgtccctgaggaggtgcaaacagctctatatagctgggcctc 35042643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 38209891 - 38209842
Alignment:
Q  76 ggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctca 125  Q
    ||||||||||||||||||  |||||||||||||||||   ||||||||||    
T  38209891 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 38209842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 48694710 - 48694759
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||| ||| ||||| || |||||||||||||| |||||||||||||||||    
T  48694710 caggaccggccctggggaggtgcaaacagctctacagagctgggcctccc 48694759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 13459794 - 13459850
Alignment:
Q  70 cctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    ||||||||||||||||||||||||  |||||| |||||||| |   |||||||||||    
T  13459794 cctgagggggtgcaaacagctcaaacgagctgagcctcccttaaggatgggcctcaa 13459850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 15735030 - 15735070
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||| |||||||| |||| ||||||||||||||||    
T  15735030 ttttaggcctgttagaattgggtcttcttgcttttggtgtt 15735070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 27596696 - 27596656
Alignment:
Q  69 ccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||||||||||||| ||||||||||  ||||||||||||||    
T  27596696 ccctgagggggtgcgaacagctcaaacgagctgggcctccc 27596656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 30507245 - 30507205
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  30507245 ttttaggcctataagaattgagtcctcttgcttttggtgtt 30507205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 36178607 - 36178647
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||| ||||||||  |||||||||||||||||||||    
T  36178607 ttttaggcccattagaatcgggtcctcttgcttttggtgtt 36178647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 40217164 - 40217204
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| |||| | ||||||||||||||    
T  40217164 ttttaggcctattagaattgggtcattttgcttttggtgtt 40217204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 158; Significance: 7e-84; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 177 - 442
Target Start/End: Original strand, 106459 - 106723
Alignment:
Q  177 ccccagccattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtg 275  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||     
T  106459 ccccagccattttatgtccccttgttttagtcttttaggcctattagatttaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggta 106558  T
Q  276 gtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgt 375  Q
    ||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||| ||||| | |||          |||||    
T  106559 gtcattttcacctttgggtgtaccgcatatata--cgacaccttatatttatcttttaaaaaatataaatagaacattgttcttttaaaaaaaaatacgt 106656  T
Q  376 tttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    ||||||||||||||||  |||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  106657 tttgattttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccctg 106723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 106379 - 106445
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 126  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  106379 caggcccggccctgagagggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 106445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 184 - 442
Target Start/End: Original strand, 1271 - 1527
Alignment:
Q  184 cattttctgtccccttgttttagccttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtggtcattt 282  Q
    |||||| ||||| ||||||||| |||||||||  ||||| |||||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||    
T  1271 cattttttgtcctcttgttttaaccttttaggattattaaaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattt 1370  T
Q  283 tcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgctttttnnnnnnnnnntacgttttgatt 382  Q
    ||| || ||||||||| |||||||||  ||||| ||| |||||||||||||||||||||||||||| || |||| |||          ||||||||||||    
T  1371 tcatctctgggtgtaccgcatatata--cggcagcttgtatttatcttttaaaaaatataaatagaacagtgctcttt-taaaaaaaatacgttttgatt 1467  T
Q  383 ttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  1468 ttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 1017 - 1063
Alignment:
Q  66 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctca 112  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  1017 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctca 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 354
Target Start/End: Complemental strand, 354 - 264
Alignment:
Q  262 tcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    ||||||||||||| || |||||||| ||||||||||| |||||||||  || |||||| ||||||||||||||||||| |||||||| |||||    
T  354 tcatgtatacggtagtgattttcacatttgggtgtaccgcatatata--cgacaccttgtatttatcttttaaaaaatttaaatagaacattg 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 4149 - 4250
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa-nnnnnnnnaatacccactagtactactgccct 158  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||         ||||||||||||||||||||||||    
T  4149 cagggccggccctgagagggtgcaaacagctcaacagagctgggcctcctccagtcatgggcctcaatttttttttaatacccactagtactactgccct 4248  T
Q  159 cc 160  Q
    ||    
T  4249 cc 4250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 206591 - 206496
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||| |||||||||||||| || ||||||||| |||||||||| |||||||||  || |||||| ||||||||||||| ||||| |||||||| ||||    
T  206591 ggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatata--cgacaccttgtatttatcttttacaaaatttaaatagaacatt 206496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 173612 - 173516
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||| |||| ||||||||| || ||||| |||||||||||||  ||||||||||  || ||||| ||||||||||||||||||| |||||||| |||||    
T  173612 ggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatac--ggtaccttgtatttatcttttaaaaaatttaaatagaacattg 173516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 173684 - 173644
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||||||||||||  | ||||||||||||||||||    
T  173684 ttttaggcctattagaattgagacctcttgcttttggtgtt 173644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 1355 - 1450
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcatt 353  Q
    |||| |||||||||||| | || |||||||| ||||||||||  ||||||||||   ||||||||||||||||||||||||| | |||||||| ||||    
T  1355 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatataca--gcaccttatatttatcttttaaaaattttaaatagaacatt 1450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 1285 - 1325
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    |||||||||| |||||||| ||||||||| |||||||||||    
T  1285 ttttaggcctgttagaattgggtcctcttacttttggtgtt 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 359
Target Start/End: Original strand, 38926 - 39027
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgc 355  Q
    |||| ||||| |||||||| || |||||||| |||| |||||  ||||||||||  | |||||| ||||||||||||||||||| |||||||| |||||     
T  38926 ggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatac--gacaccttgtatttatcttttaaaaaatttaaatagaacattgt 39023  T
Q  356 tttt 359  Q
    ||||    
T  39024 tttt 39027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 442
Target Start/End: Original strand, 183173 - 183244
Alignment:
Q  371 tacgttttgattttatcactgctctcttttcattctcagagctgagcctccgaattcttagggacggccctg 442  Q
    |||||||| ||||||||||||  |||||||||||| |||||| ||||||| ||||| | |||||||||||||    
T  183173 tacgttttaattttatcactggcctcttttcattcccagagccgagcctctgaattttcagggacggccctg 183244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 181903 - 181969
Alignment:
Q  240 ttttggtgttgg-tgggggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatat 305  Q
    |||||||||| | |||||||| |||||||||||||| ||||||||||||| ||| ||||| ||||||    
T  181903 ttttggtgttagatgggggttcctcatgtatacggtagtcattttcacctctggatgtaccgcatat 181969  T

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Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 181431 - 181480
Alignment:
Q  56 tcagcaggcccgtccctgagggggtgcaaacagctcaacagagctgggcc 105  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||||||    
T  181431 tcagcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcc 181480  T

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Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 24072 - 24005
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaataga 348  Q
    |||||||| ||||||||||| ||||||||||  | |||||| ||||||||||||||||||| ||||||||    
T  24072 attttcacttttgggtgtaccgcatatatac--gacaccttgtatttatcttttaaaaaatttaaataga 24005  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 40086 - 40166
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||| |||||||||||| | || ||||||||||| ||||||||  |||| ||||  |||||||| ||||||||||||||||||    
T  40086 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatac--ggcaccttgtatttatcttttaaaaaa 40166  T

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Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 138146 - 138226
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaa 338  Q
    |||| |||||||||||| | || ||||||||||| ||||||||  |||| ||||  |||||||| ||||||||||||||||||    
T  138146 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatac--ggcaccttgtatttatcttttaaaaaa 138226  T

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Target: scaffold0022; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 40012 - 40052
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  40012 ttttaggcctattagaattgggtcctcttgctttttgtgtt 40052  T

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Target: scaffold0022; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 138072 - 138112
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  138072 ttttaggcctattagaattgggtcctcttgctttttgtgtt 138112  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 230956 - 230865
Alignment:
Q  261 ctcatgtatacggtggtcattttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattg 354  Q
    |||||||||| ||| || |||||||||||||||| ||  ||||||||||    ||||||| ||||||||||||| |||| |||||||| |||||    
T  230956 ctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaa--caccttaaatttatcttttaacaaatttaaatagaacattg 230865  T

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Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 231033 - 230993
Alignment:
Q  209 ttttaggcctattagaattaggtcctcttgcttttggtgtt 249  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  231033 ttttaggcctattagaatcgggtcctcttgcttttggtgtt 230993  T

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Target: scaffold0369 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 14373 - 14422
Alignment:
Q  60 caggcccgtccctgagggggtgcaaacagctcaacagagctgggcctccc 109  Q
    |||| ||| ||||| || |||||||||||||| |||||||||||||||||    
T  14373 cagggccggccctggggaggtgcaaacagctctacagagctgggcctccc 14422  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 16028 - 16081
Alignment:
Q  256 ggtttctcatgtatacggtggtcattttcacctttgggtgtacggcatatatac 309  Q
    ||||||||||||||||||| || ||||||| |||||| ||||| ||||| ||||    
T  16028 ggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatac 16081  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 351413 - 351360
Alignment:
Q  279 attttcacctttgggtgtacggcatatatacccggcaccttatatttatcttttaa 334  Q
    ||||||||||||||||||||  ||||||||  || |||||| ||||||||||||||    
T  351413 attttcacctttgggtgtacaacatatata--cgacaccttgtatttatcttttaa 351360  T

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