View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5095-Insertion-7 (Length: 733)

Name: NF5095-Insertion-7
Description: NF5095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5095-Insertion-7
NF5095-Insertion-7
[»] chr3 (84 HSPs)
chr3 (134-733)||(17773000-17773598)
chr3 (134-733)||(19074301-19074899)
chr3 (446-564)||(3192977-3193096)
chr3 (451-564)||(51315684-51315799)
chr3 (8-105)||(17773629-17773726)
chr3 (8-105)||(19074930-19075027)
chr3 (452-565)||(28712663-28712777)
chr3 (447-560)||(4474266-4474378)
chr3 (451-560)||(44585986-44586097)
chr3 (446-564)||(86758-86879)
chr3 (448-566)||(54464360-54464480)
chr3 (448-563)||(14856546-14856663)
chr3 (452-564)||(38958046-38958158)
chr3 (451-565)||(25902553-25902669)
chr3 (446-564)||(28204479-28204596)
chr3 (449-564)||(28944164-28944280)
chr3 (454-570)||(12759496-12759618)
chr3 (447-565)||(43747277-43747396)
chr3 (446-566)||(54718991-54719109)
chr3 (448-560)||(46226887-46226998)
chr3 (446-564)||(25154376-25154496)
chr3 (448-565)||(14340731-14340850)
chr3 (448-564)||(14349309-14349423)
chr3 (448-562)||(47189599-47189713)
chr3 (451-560)||(578613-578722)
chr3 (451-564)||(35359184-35359299)
chr3 (452-562)||(27178141-27178252)
chr3 (448-563)||(53184715-53184831)
chr3 (451-562)||(1814758-1814866)
chr3 (452-562)||(19404399-19404509)
chr3 (475-563)||(33329611-33329701)
chr3 (490-564)||(36677523-36677597)
chr3 (490-564)||(36687605-36687679)
chr3 (451-564)||(44433264-44433381)
chr3 (451-566)||(38957842-38957960)
chr3 (451-552)||(25248887-25248988)
chr3 (446-503)||(44436449-44436507)
chr3 (451-563)||(1814550-1814662)
chr3 (451-567)||(33329817-33329940)
chr3 (454-561)||(48348257-48348365)
chr3 (451-562)||(50802660-50802772)
chr3 (451-562)||(50873105-50873217)
chr3 (451-561)||(22494555-22494666)
chr3 (458-560)||(42686485-42686588)
chr3 (457-563)||(52008454-52008560)
chr3 (446-563)||(3192774-3192891)
chr3 (447-564)||(25902401-25902519)
chr3 (452-564)||(15978893-15979005)
chr3 (490-570)||(20432183-20432264)
chr3 (451-503)||(44436598-44436651)
chr3 (451-563)||(54719197-54719309)
chr3 (451-565)||(3916429-3916543)
chr3 (451-519)||(25843411-25843479)
chr3 (446-564)||(44433054-44433174)
chr3 (452-546)||(578431-578525)
chr3 (458-528)||(28712490-28712561)
chr3 (447-511)||(44585839-44585905)
chr3 (478-563)||(53254963-53255049)
chr3 (454-550)||(3916640-3916734)
chr3 (451-563)||(38177178-38177290)
chr3 (448-503)||(8024835-8024891)
chr3 (454-564)||(49787249-49787361)
chr3 (449-496)||(51315562-51315610)
chr3 (451-560)||(7218351-7218466)
chr3 (484-552)||(29512558-29512627)
chr3 (447-560)||(43586572-43586682)
chr3 (451-503)||(43747480-43747533)
chr3 (484-564)||(53255258-53255339)
chr3 (451-562)||(54464163-54464276)
chr3 (452-564)||(44127547-44127662)
chr3 (454-528)||(7218188-7218263)
chr3 (451-565)||(14856756-14856870)
chr3 (452-562)||(43586762-43586872)
chr3 (451-560)||(86578-86687)
chr3 (453-502)||(1938378-1938428)
chr3 (451-528)||(14340934-14341012)
chr3 (451-563)||(20432384-20432497)
chr3 (516-566)||(38178720-38178770)
chr3 (456-503)||(44624684-44624733)
chr3 (454-503)||(44624833-44624883)
chr3 (537-567)||(44624887-44624917)
chr3 (452-560)||(48348459-48348569)
chr3 (451-503)||(27178347-27178400)
chr3 (482-562)||(37755169-37755250)
[»] chr7 (73 HSPs)
chr7 (446-567)||(4049917-4050039)
chr7 (451-570)||(14247287-14247407)
chr7 (446-570)||(20185112-20185236)
chr7 (451-567)||(28350112-28350230)
chr7 (454-563)||(36580274-36580384)
chr7 (452-543)||(28350345-28350436)
chr7 (451-572)||(17876358-17876480)
chr7 (458-564)||(41243643-41243749)
chr7 (455-561)||(47909696-47909803)
chr7 (453-563)||(41243845-41243958)
chr7 (448-561)||(8074071-8074187)
chr7 (453-565)||(28785754-28785869)
chr7 (451-565)||(15347952-15348064)
chr7 (451-565)||(15348157-15348274)
chr7 (446-551)||(5172719-5172827)
chr7 (454-560)||(19645006-19645112)
chr7 (454-562)||(3247377-3247484)
chr7 (446-503)||(28472574-28472631)
chr7 (447-566)||(35250316-35250433)
chr7 (454-564)||(15107195-15107304)
chr7 (448-567)||(18504438-18504557)
chr7 (446-564)||(11373846-11373964)
chr7 (446-565)||(21505613-21505734)
chr7 (455-566)||(3382025-3382137)
chr7 (450-542)||(10097577-10097669)
chr7 (456-564)||(23826224-23826337)
chr7 (452-566)||(48058858-48058974)
chr7 (469-563)||(20505229-20505323)
chr7 (472-560)||(6792017-6792107)
chr7 (451-564)||(35250118-35250232)
chr7 (451-563)||(36903471-36903581)
chr7 (451-563)||(6726258-6726370)
chr7 (451-560)||(9500101-9500213)
chr7 (451-560)||(18186651-18186763)
chr7 (451-564)||(20184915-20185031)
chr7 (467-543)||(24432978-24433055)
chr7 (454-560)||(18186442-18186550)
chr7 (453-562)||(36903261-36903374)
chr7 (451-563)||(15029058-15029175)
chr7 (517-563)||(21748082-21748128)
chr7 (458-564)||(45697486-45697599)
chr7 (452-528)||(3381898-3381975)
chr7 (455-574)||(21505821-21505942)
chr7 (455-560)||(23746093-23746205)
chr7 (451-562)||(28472391-28472501)
chr7 (473-563)||(48059168-48059260)
chr7 (452-563)||(6726455-6726573)
chr7 (452-567)||(45717896-45718011)
chr7 (474-560)||(46265868-46265955)
chr7 (451-565)||(46266455-46266569)
chr7 (506-564)||(21939331-21939389)
chr7 (451-571)||(36580475-36580596)
chr7 (457-564)||(3318317-3318424)
chr7 (483-570)||(7873864-7873952)
chr7 (457-564)||(42256581-42256692)
chr7 (456-564)||(17931935-17932041)
chr7 (505-560)||(20505101-20505156)
chr7 (448-528)||(40872201-40872283)
chr7 (451-557)||(13889461-13889567)
chr7 (454-528)||(18504277-18504354)
chr7 (469-564)||(45718089-45718186)
chr7 (448-511)||(11374002-11374066)
chr7 (455-564)||(14247509-14247615)
chr7 (482-565)||(43078035-43078119)
chr7 (482-565)||(43092012-43092096)
chr7 (450-563)||(24679043-24679158)
chr7 (457-503)||(40872353-40872400)
chr7 (506-564)||(282858-282916)
chr7 (506-564)||(327435-327493)
chr7 (457-560)||(4049709-4049817)
chr7 (483-564)||(7873508-7873590)
chr7 (461-525)||(8662825-8662891)
chr7 (482-563)||(10691298-10691380)
[»] chr6 (36 HSPs)
chr6 (451-565)||(12766415-12766530)
chr6 (451-564)||(3579594-3579708)
chr6 (446-561)||(28011321-28011436)
chr6 (447-563)||(33401251-33401367)
chr6 (450-566)||(1377407-1377523)
chr6 (450-566)||(1385155-1385271)
chr6 (448-556)||(18030944-18031050)
chr6 (451-564)||(238929-239041)
chr6 (451-564)||(10727394-10727509)
chr6 (451-565)||(30349347-30349462)
chr6 (446-564)||(10727189-10727309)
chr6 (451-556)||(2853435-2853541)
chr6 (448-570)||(17248839-17248962)
chr6 (452-564)||(33399785-33399897)
chr6 (448-562)||(2840790-2840906)
chr6 (457-559)||(26601666-26601769)
chr6 (451-563)||(6036644-6036758)
chr6 (474-563)||(5003089-5003178)
chr6 (452-559)||(17532254-17532364)
chr6 (451-559)||(20474905-20475014)
chr6 (451-564)||(2853615-2853731)
chr6 (451-563)||(266122-266235)
chr6 (459-564)||(30349563-30349671)
chr6 (452-543)||(266312-266403)
chr6 (451-562)||(6036860-6036971)
chr6 (447-553)||(32143447-32143555)
chr6 (451-566)||(2203352-2203467)
chr6 (455-560)||(239149-239256)
chr6 (451-503)||(32143319-32143372)
chr6 (455-566)||(8223937-8224047)
chr6 (451-503)||(26311604-26311657)
chr6 (478-565)||(12798725-12798812)
chr6 (453-563)||(17248636-17248748)
chr6 (513-564)||(2203186-2203237)
chr6 (455-544)||(5003283-5003374)
chr6 (453-503)||(18604165-18604216)
[»] chr1 (66 HSPs)
chr1 (447-561)||(23891662-23891777)
chr1 (446-565)||(39642198-39642319)
chr1 (451-567)||(3377497-3377615)
chr1 (446-563)||(3377707-3377825)
chr1 (446-564)||(23220757-23220876)
chr1 (451-560)||(41997643-41997753)
chr1 (451-564)||(45738935-45739049)
chr1 (453-564)||(25085398-25085510)
chr1 (446-564)||(12960845-12960964)
chr1 (451-563)||(14979001-14979114)
chr1 (455-562)||(16874707-16874816)
chr1 (446-560)||(45739131-45739244)
chr1 (446-565)||(17760885-17761007)
chr1 (446-560)||(50401568-50401682)
chr1 (454-566)||(17760679-17760795)
chr1 (450-566)||(46573026-46573144)
chr1 (448-560)||(6569530-6569643)
chr1 (446-565)||(50226390-50226511)
chr1 (452-563)||(14978797-14978909)
chr1 (445-564)||(18216685-18216805)
chr1 (450-566)||(1096648-1096767)
chr1 (452-561)||(1096469-1096580)
chr1 (451-561)||(18632319-18632429)
chr1 (455-560)||(12961049-12961155)
chr1 (452-560)||(6320782-6320891)
chr1 (446-564)||(8009911-8010030)
chr1 (457-552)||(27864185-27864280)
chr1 (448-564)||(25486409-25486527)
chr1 (457-564)||(27864361-27864472)
chr1 (451-565)||(7579661-7579778)
chr1 (453-557)||(25085595-25085698)
chr1 (451-511)||(39642408-39642469)
chr1 (513-561)||(18632603-18632651)
chr1 (452-567)||(46912186-46912302)
chr1 (483-562)||(5287808-5287887)
chr1 (458-560)||(17692730-17692833)
chr1 (459-560)||(46572830-46572932)
chr1 (454-563)||(48319609-48319719)
chr1 (482-564)||(3814759-3814841)
chr1 (474-560)||(16874511-16874599)
chr1 (447-503)||(7579859-7579915)
chr1 (482-569)||(40876977-40877065)
chr1 (452-511)||(1853654-1853713)
chr1 (492-575)||(5287238-5287321)
chr1 (457-566)||(16545766-16545879)
chr1 (455-552)||(44672326-44672422)
chr1 (452-550)||(49426193-49426291)
chr1 (513-572)||(51250476-51250535)
chr1 (451-563)||(32295153-32295267)
chr1 (451-566)||(8301545-8301661)
chr1 (451-503)||(15659041-15659094)
chr1 (451-503)||(17692886-17692939)
chr1 (451-503)||(23220627-23220680)
chr1 (457-560)||(49425998-49426103)
chr1 (448-560)||(7060630-7060745)
chr1 (506-562)||(37008218-37008274)
chr1 (452-503)||(50226592-50226644)
chr1 (512-567)||(11050429-11050483)
chr1 (455-561)||(23891839-23891942)
chr1 (453-566)||(30849432-30849546)
chr1 (452-525)||(50401409-50401484)
chr1 (452-494)||(44436949-44436991)
chr1 (446-519)||(44672507-44672581)
chr1 (537-566)||(32294979-32295008)
chr1 (451-503)||(46505233-46505286)
chr1 (515-560)||(46880741-46880786)
[»] chr2 (67 HSPs)
chr2 (447-560)||(6510196-6510310)
chr2 (451-564)||(14489412-14489525)
chr2 (447-565)||(37431734-37431853)
chr2 (448-563)||(34679290-34679404)
chr2 (446-564)||(19206141-19206259)
chr2 (447-563)||(15023035-15023152)
chr2 (454-566)||(43028791-43028904)
chr2 (452-561)||(4925648-4925755)
chr2 (451-564)||(5470537-5470650)
chr2 (457-570)||(14489207-14489321)
chr2 (446-563)||(15022838-15022956)
chr2 (454-565)||(34679095-34679208)
chr2 (452-565)||(35718857-35718971)
chr2 (451-563)||(16043222-16043339)
chr2 (451-564)||(6592934-6593047)
chr2 (452-560)||(34761061-34761171)
chr2 (446-565)||(43028989-43029109)
chr2 (451-566)||(14943745-14943860)
chr2 (453-563)||(18709247-18709356)
chr2 (451-570)||(44617939-44618058)
chr2 (451-565)||(25378-25499)
chr2 (447-550)||(14943549-14943653)
chr2 (451-564)||(32969725-32969842)
chr2 (451-563)||(39918434-39918548)
chr2 (451-563)||(31827733-31827845)
chr2 (446-567)||(25333690-25333810)
chr2 (454-563)||(36176981-36177089)
chr2 (457-563)||(37803337-37803446)
chr2 (446-564)||(27489631-27489756)
chr2 (451-569)||(4576537-4576657)
chr2 (450-564)||(44297562-44297676)
chr2 (448-564)||(5362174-5362292)
chr2 (475-565)||(21358328-21358421)
chr2 (451-560)||(12948892-12949000)
chr2 (451-560)||(5470333-5470441)
chr2 (454-564)||(24472650-24472759)
chr2 (483-564)||(14816030-14816112)
chr2 (455-564)||(20650369-20650479)
chr2 (456-569)||(25333493-25333607)
chr2 (448-564)||(31827524-31827642)
chr2 (446-503)||(39918637-39918695)
chr2 (454-534)||(35718676-35718756)
chr2 (453-570)||(6592717-6592838)
chr2 (455-565)||(21361879-21361990)
chr2 (484-564)||(25375109-25375188)
chr2 (447-552)||(18224929-18225033)
chr2 (456-563)||(19895613-19895723)
chr2 (451-528)||(2609289-2609367)
chr2 (451-503)||(34760908-34760961)
chr2 (447-568)||(19399177-19399302)
chr2 (447-570)||(24306009-24306132)
chr2 (454-564)||(12949221-12949332)
chr2 (451-564)||(18969099-18969209)
chr2 (454-564)||(19399377-19399490)
chr2 (458-511)||(25411594-25411648)
chr2 (446-503)||(36195651-36195708)
chr2 (451-511)||(37431595-37431657)
chr2 (452-563)||(37803118-37803236)
chr2 (490-563)||(4576783-4576854)
chr2 (451-503)||(8857107-8857160)
chr2 (454-550)||(27489447-27489543)
chr2 (451-503)||(34100801-34100854)
chr2 (452-503)||(4925500-4925552)
chr2 (489-566)||(36177329-36177407)
chr2 (451-564)||(35500291-35500406)
chr2 (483-563)||(14815698-14815779)
chr2 (455-511)||(32969610-32969667)
[»] chr4 (95 HSPs)
chr4 (446-565)||(35383763-35383880)
chr4 (451-566)||(23759558-23759674)
chr4 (446-561)||(49185754-49185870)
chr4 (446-564)||(35393864-35393984)
chr4 (446-564)||(1571603-1571721)
chr4 (451-568)||(50769563-50769680)
chr4 (451-564)||(53924746-53924860)
chr4 (452-564)||(6614846-6614958)
chr4 (450-566)||(53312486-53312602)
chr4 (451-564)||(44356598-44356711)
chr4 (448-563)||(2653953-2654071)
chr4 (452-560)||(50769366-50769476)
chr4 (448-560)||(14449276-14449390)
chr4 (454-561)||(1420537-1420645)
chr4 (456-569)||(11824182-11824297)
chr4 (454-566)||(12719648-12719763)
chr4 (451-563)||(14449484-14449599)
chr4 (446-562)||(21957662-21957780)
chr4 (451-564)||(4796035-4796149)
chr4 (451-560)||(8965525-8965634)
chr4 (450-559)||(14060760-14060869)
chr4 (451-563)||(2181325-2181438)
chr4 (446-565)||(29697717-29697837)
chr4 (451-564)||(53312285-53312401)
chr4 (451-565)||(2016789-2016905)
chr4 (451-561)||(21871587-21871696)
chr4 (451-561)||(21927448-21927557)
chr4 (454-565)||(23759777-23759889)
chr4 (451-567)||(51362532-51362653)
chr4 (451-564)||(1420744-1420859)
chr4 (446-552)||(2837095-2837204)
chr4 (446-571)||(3658120-3658246)
chr4 (447-563)||(6207176-6207294)
chr4 (483-573)||(21957529-21957618)
chr4 (448-560)||(16292465-16292578)
chr4 (451-563)||(20112350-20112463)
chr4 (451-562)||(27978899-27979009)
chr4 (451-564)||(2016988-2017103)
chr4 (446-566)||(10059679-10059802)
chr4 (453-563)||(10059899-10060013)
chr4 (454-565)||(21451457-21451569)
chr4 (472-562)||(35615315-35615407)
chr4 (446-565)||(51371659-51371779)
chr4 (452-554)||(6637075-6637178)
chr4 (451-564)||(14060903-14061018)
chr4 (451-564)||(25909486-25909601)
chr4 (451-564)||(4796240-4796353)
chr4 (451-561)||(8070630-8070739)
chr4 (451-560)||(51362739-51362851)
chr4 (451-564)||(6207374-6207491)
chr4 (453-564)||(11824398-11824513)
chr4 (513-566)||(43074613-43074666)
chr4 (483-563)||(49185571-49185651)
chr4 (487-566)||(19909170-19909249)
chr4 (474-560)||(37831595-37831683)
chr4 (448-563)||(42525965-42526081)
chr4 (451-562)||(54983849-54983957)
chr4 (451-564)||(2836898-2837013)
chr4 (452-560)||(13825884-13825993)
chr4 (454-561)||(14016722-14016836)
chr4 (451-564)||(2654169-2654283)
chr4 (447-540)||(21451643-21451736)
chr4 (451-560)||(27978695-27978805)
chr4 (457-560)||(42526156-42526258)
chr4 (451-563)||(52462988-52463101)
chr4 (468-565)||(12719449-12719545)
chr4 (451-557)||(18937248-18937354)
chr4 (451-561)||(51233677-51233786)
chr4 (453-528)||(6637265-6637341)
chr4 (451-528)||(8965716-8965790)
chr4 (446-560)||(21322710-21322826)
chr4 (446-520)||(21597444-21597520)
chr4 (452-503)||(11983592-11983643)
chr4 (451-560)||(20737434-20737545)
chr4 (448-499)||(21871445-21871496)
chr4 (448-499)||(21927306-21927357)
chr4 (506-568)||(3369842-3369904)
chr4 (516-566)||(4411493-4411543)
chr4 (451-528)||(16292305-16292382)
chr4 (456-565)||(29697522-29697631)
chr4 (452-528)||(47999564-47999642)
chr4 (446-503)||(54855503-54855561)
chr4 (451-503)||(21597602-21597655)
chr4 (465-528)||(2180811-2180875)
chr4 (466-572)||(34773511-34773616)
chr4 (451-562)||(40489212-40489324)
chr4 (515-563)||(43074832-43074880)
chr4 (506-569)||(1186652-1186715)
chr4 (483-563)||(19536945-19537027)
chr4 (514-561)||(35615433-35615479)
chr4 (498-565)||(37832946-37833013)
chr4 (451-486)||(43074788-43074823)
chr4 (452-565)||(52865378-52865493)
chr4 (487-564)||(30064337-30064415)
chr4 (448-482)||(43074671-43074705)
[»] scaffold0062 (2 HSPs)
scaffold0062 (446-570)||(46069-46195)
scaffold0062 (451-503)||(46275-46328)
[»] chr8 (62 HSPs)
chr8 (446-566)||(17070904-17071025)
chr8 (446-566)||(17577247-17577368)
chr8 (446-566)||(41487197-41487319)
chr8 (446-564)||(23702122-23702244)
chr8 (449-558)||(22192307-22192417)
chr8 (446-563)||(9762396-9762513)
chr8 (453-553)||(14880537-14880638)
chr8 (452-564)||(6807172-6807284)
chr8 (448-566)||(35213028-35213145)
chr8 (451-564)||(30539191-30539305)
chr8 (451-561)||(18092913-18093023)
chr8 (451-564)||(20853377-20853490)
chr8 (451-560)||(27545556-27545666)
chr8 (459-562)||(33298545-33298646)
chr8 (447-564)||(39889771-39889888)
chr8 (483-566)||(37813159-37813243)
chr8 (454-565)||(521647-521758)
chr8 (446-560)||(25144138-25144251)
chr8 (452-564)||(26824034-26824146)
chr8 (454-565)||(23702338-23702450)
chr8 (454-564)||(41602814-41602926)
chr8 (478-564)||(28349535-28349622)
chr8 (446-570)||(3676107-3676236)
chr8 (452-564)||(27545343-27545453)
chr8 (452-544)||(17071822-17071913)
chr8 (452-544)||(17576360-17576451)
chr8 (451-566)||(29044747-29044862)
chr8 (453-563)||(45177201-45177313)
chr8 (451-560)||(41487410-41487520)
chr8 (483-564)||(16982625-16982707)
chr8 (451-565)||(37263356-37263475)
chr8 (451-562)||(32768452-32768562)
chr8 (454-560)||(29657904-29658009)
chr8 (450-565)||(45456964-45457079)
chr8 (483-560)||(25896993-25897071)
chr8 (448-561)||(29657702-29657820)
chr8 (451-503)||(37813291-37813344)
chr8 (457-563)||(6807375-6807480)
chr8 (475-563)||(36688223-36688311)
chr8 (455-569)||(37939908-37940021)
chr8 (451-561)||(42218444-42218555)
chr8 (446-503)||(30539049-30539107)
chr8 (451-528)||(41602518-41602596)
chr8 (451-503)||(3676328-3676381)
chr8 (472-564)||(32071236-32071326)
chr8 (451-561)||(26823828-26823940)
chr8 (472-564)||(37263559-37263650)
chr8 (454-572)||(39889976-39890096)
chr8 (506-569)||(755897-755960)
chr8 (451-511)||(20853579-20853640)
chr8 (474-563)||(29791223-29791310)
chr8 (452-503)||(16982811-16982863)
chr8 (455-566)||(22192502-22192613)
chr8 (454-511)||(21486706-21486765)
chr8 (457-503)||(21486857-21486904)
chr8 (483-569)||(29340762-29340849)
chr8 (453-511)||(44101491-44101550)
chr8 (451-565)||(44269319-44269433)
chr8 (485-566)||(14170419-14170501)
chr8 (483-564)||(17512096-17512178)
chr8 (483-572)||(23475615-23475705)
chr8 (453-560)||(22846446-22846555)
[»] chr5 (61 HSPs)
chr5 (446-562)||(32391720-32391837)
chr5 (446-564)||(12406040-12406159)
chr5 (446-560)||(3333695-3333810)
chr5 (448-565)||(36798373-36798492)
chr5 (446-564)||(2974828-2974949)
chr5 (446-567)||(3999082-3999204)
chr5 (454-566)||(37897921-37898034)
chr5 (446-564)||(35166488-35166608)
chr5 (451-562)||(39574240-39574350)
chr5 (448-568)||(24405694-24405816)
chr5 (448-565)||(20512396-20512515)
chr5 (451-572)||(36798161-36798285)
chr5 (451-573)||(3333901-3334025)
chr5 (446-567)||(40276014-40276137)
chr5 (446-565)||(6130253-6130373)
chr5 (446-562)||(22300807-22300921)
chr5 (446-561)||(25910917-25911037)
chr5 (451-564)||(27904683-27904798)
chr5 (451-562)||(43098227-43098337)
chr5 (446-566)||(18403186-18403306)
chr5 (447-565)||(19340762-19340878)
chr5 (447-566)||(43098025-43098146)
chr5 (451-560)||(28446204-28446315)
chr5 (451-565)||(12406240-12406356)
chr5 (451-560)||(31080480-31080590)
chr5 (452-572)||(19131701-19131821)
chr5 (457-565)||(22300599-22300708)
chr5 (467-562)||(35877496-35877592)
chr5 (451-566)||(16132929-16133047)
chr5 (446-560)||(25364022-25364136)
chr5 (451-566)||(40276229-40276347)
chr5 (458-563)||(6131740-6131849)
chr5 (452-560)||(24405493-24405603)
chr5 (451-560)||(20629739-20629851)
chr5 (457-561)||(30604293-30604399)
chr5 (483-564)||(6464308-6464390)
chr5 (454-561)||(20629947-20630057)
chr5 (454-567)||(35166293-35166406)
chr5 (451-564)||(25910720-25910837)
chr5 (457-563)||(32391925-32392033)
chr5 (446-503)||(21066535-21066593)
chr5 (451-528)||(26702474-26702549)
chr5 (451-528)||(26972207-26972282)
chr5 (446-503)||(30603673-30603731)
chr5 (483-564)||(34319959-34320040)
chr5 (452-560)||(8284158-8284266)
chr5 (455-511)||(9852839-9852896)
chr5 (448-503)||(39574435-39574491)
chr5 (452-563)||(25363825-25363938)
chr5 (451-564)||(26562989-26563102)
chr5 (451-495)||(2974702-2974747)
chr5 (451-503)||(9852985-9853038)
chr5 (457-501)||(31080686-31080731)
chr5 (451-528)||(16132780-16132858)
chr5 (467-564)||(24779490-24779589)
chr5 (513-560)||(40133143-40133190)
chr5 (483-564)||(20126437-20126519)
chr5 (451-504)||(37897777-37897831)
chr5 (506-564)||(42585985-42586043)
chr5 (483-543)||(26702646-26702707)
chr5 (483-543)||(26972379-26972440)
[»] scaffold0025 (3 HSPs)
scaffold0025 (446-564)||(19039-19158)
scaffold0025 (451-503)||(19229-19282)
scaffold0025 (498-560)||(19589-19652)
[»] scaffold0328 (2 HSPs)
scaffold0328 (451-560)||(9415-9525)
scaffold0328 (446-564)||(9616-9731)
[»] scaffold0417 (1 HSPs)
scaffold0417 (449-570)||(9534-9658)
[»] scaffold0248 (2 HSPs)
scaffold0248 (447-562)||(605-723)
scaffold0248 (451-560)||(405-517)
[»] scaffold0372 (2 HSPs)
scaffold0372 (454-565)||(122-234)
scaffold0372 (447-540)||(308-401)
[»] scaffold1458 (1 HSPs)
scaffold1458 (490-564)||(1470-1545)
[»] scaffold0515 (1 HSPs)
scaffold0515 (490-564)||(3638-3713)
[»] scaffold0306 (1 HSPs)
scaffold0306 (490-564)||(3638-3713)
[»] scaffold0011 (2 HSPs)
scaffold0011 (451-552)||(145364-145467)
scaffold0011 (446-519)||(145550-145623)
[»] scaffold0809 (2 HSPs)
scaffold0809 (452-560)||(2961-3068)
scaffold0809 (447-564)||(2751-2870)
[»] scaffold0150 (1 HSPs)
scaffold0150 (451-560)||(9558-9664)
[»] scaffold0137 (2 HSPs)
scaffold0137 (451-562)||(19915-20027)
scaffold0137 (452-550)||(20121-20219)
[»] scaffold0015 (2 HSPs)
scaffold0015 (453-564)||(77063-77176)
scaffold0015 (452-512)||(76913-76975)
[»] scaffold0250 (1 HSPs)
scaffold0250 (458-562)||(3573-3680)
[»] scaffold0041 (2 HSPs)
scaffold0041 (448-528)||(93999-94081)
scaffold0041 (457-503)||(93882-93929)
[»] scaffold0016 (2 HSPs)
scaffold0016 (446-503)||(203249-203307)
scaffold0016 (451-570)||(203376-203494)
[»] scaffold0725 (1 HSPs)
scaffold0725 (516-564)||(6698-6746)
[»] scaffold0067 (1 HSPs)
scaffold0067 (457-500)||(4220-4264)
[»] scaffold0166 (1 HSPs)
scaffold0166 (467-564)||(21873-21972)


Alignment Details
Target: chr3 (Bit Score: 541; Significance: 0; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 541; E-Value: 0
Query Start/End: Original strand, 134 - 733
Target Start/End: Complemental strand, 17773598 - 17773000
Alignment:
Q  134 gttcattttcgggaaatcgaagtgttttgaaaaatttaaccttcttttctaatgagaagtattagtatgttaacccttagttcaaaagctacctaacctc 233  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  17773598 gttcattttcgggaaattgaagtgttttgaaaaatttaaccttcttttctaatgagaagtattagtatgttaacccttagttcaaaagctaccttaactc 17773499  T
Q  234 cttaacccctagctcaacaaaccaattgagctacccaacttatctgaataattggaaattacttttctcacttttaagatttctcctcgaaatactcagg 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17773498 cttaacccctagctcaacaaaccaattgagctacccaacttatctgaataattggaaattacttttctcacttttaagatttctcctcgaaatactcagg 17773399  T
Q  334 tggaagttaactgttgttcaacttttcagcgacaaaattaaannnnnnngaacactttttagagtggtccaatcactttttaaatcaaaaatatctaacg 433  Q
    |||||||||||||||||||||||||||||||||||  |||||       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17773398 tggaagttaactgttgttcaacttttcagcgacaa--ttaaatttttttgaacactttttagagtggtccaatcactttttaaatcaaaaatatctaacg 17773301  T
Q  434 attcttaactacccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtttttt-ccttagggtgccaaaatcgcaacttagtg 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17773300 attcttaactacccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtg 17773201  T
Q  533 aaagttagggggcgaaaactgctattaagcctttatttaaaagaccaaacatggagctgcaaactcttccaactgggaaaatactaaaatcgaaggtcat 632  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  17773200 aaagttagggggcgaaaactgctattaagcctttatttaaaagaccaaacatggagatgcaaactcttccaactgggaaaatactaaaaccgaaggtcat 17773101  T
Q  633 ttatagtttaactgctgatgaagaaaaatattttgttggttgtcgaaagaaacggggatgcctagctgatgttcttctaacttggcaaggcgtgccgatg 732  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17773100 ttatagtttaactgctgatgaagaaaaatattttgttggttgtcgaaagaaacggggatgcctagctgatgttcttctaacttggcaaggcgtgccgatg 17773001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 541; E-Value: 0
Query Start/End: Original strand, 134 - 733
Target Start/End: Complemental strand, 19074899 - 19074301
Alignment:
Q  134 gttcattttcgggaaatcgaagtgttttgaaaaatttaaccttcttttctaatgagaagtattagtatgttaacccttagttcaaaagctacctaacctc 233  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  19074899 gttcattttcgggaaattgaagtgttttgaaaaatttaaccttcttttctaatgagaagtattagtatgttaacccttagttcaaaagctaccttaactc 19074800  T
Q  234 cttaacccctagctcaacaaaccaattgagctacccaacttatctgaataattggaaattacttttctcacttttaagatttctcctcgaaatactcagg 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19074799 cttaacccctagctcaacaaaccaattgagctacccaacttatctgaataattggaaattacttttctcacttttaagatttctcctcgaaatactcagg 19074700  T
Q  334 tggaagttaactgttgttcaacttttcagcgacaaaattaaannnnnnngaacactttttagagtggtccaatcactttttaaatcaaaaatatctaacg 433  Q
    |||||||||||||||||||||||||||||||||||  |||||       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19074699 tggaagttaactgttgttcaacttttcagcgacaa--ttaaatttttttgaacactttttagagtggtccaatcactttttaaatcaaaaatatctaacg 19074602  T
Q  434 attcttaactacccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtttttt-ccttagggtgccaaaatcgcaacttagtg 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19074601 attcttaactacccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtg 19074502  T
Q  533 aaagttagggggcgaaaactgctattaagcctttatttaaaagaccaaacatggagctgcaaactcttccaactgggaaaatactaaaatcgaaggtcat 632  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  19074501 aaagttagggggcgaaaactgctattaagcctttatttaaaagaccaaacatggagatgcaaactcttccaactgggaaaatactaaaaccgaaggtcat 19074402  T
Q  633 ttatagtttaactgctgatgaagaaaaatattttgttggttgtcgaaagaaacggggatgcctagctgatgttcttctaacttggcaaggcgtgccgatg 732  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19074401 ttatagtttaactgctgatgaagaaaaatattttgttggttgtcgaaagaaacggggatgcctagctgatgttcttctaacttggcaaggcgtgccgatg 19074302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 3192977 - 3193096
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||  |||||||||||||||||||| |||||||| |||||||| ||||||| | ||||||||||||||  ||||||||||||||    
T  3192977 ccttggggggccaaaactgttacagttgcaaaacttaggggtcggttttgaagtttttttcttagggggtcaaaatcgcaacttcttgaaagttaggggg 3193076  T
Q  545 cgaaaactgctattaagcct 564  Q
     |||||||||||||||||||    
T  3193077 tgaaaactgctattaagcct 3193096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 51315684 - 51315799
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||| |||||||||||||||| | |||||||||||||| ||    
T  51315684 gggggccaaaactgccacaggtgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaa 51315783  T
Q  549 aactgctattaagcct 564  Q
    ||||||||||||||||    
T  51315784 aactgctattaagcct 51315799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 17773726 - 17773629
Alignment:
Q  8 cttggggagtaagttttgaattaggtttggtcnnnnnnnngttttgcaattgctttttcactaaaccactcaatacaatttgaaagaataatagagaa 105  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17773726 cttggggagtaagttttgaattaggtttggtcaaaaaaaagttttgcaattgctttttcactaaaccactcaatacaatttgaaagaataatagagaa 17773629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 19075027 - 19074930
Alignment:
Q  8 cttggggagtaagttttgaattaggtttggtcnnnnnnnngttttgcaattgctttttcactaaaccactcaatacaatttgaaagaataatagagaa 105  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19075027 cttggggagtaagttttgaattaggtttggtcaaaaaaaagttttgcaattgctttttcactaaaccactcaatacaatttgaaagaataatagagaa 19074930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 452 - 565
Target Start/End: Original strand, 28712663 - 28712777
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||| ||||||||| |||||||||||||||||||| || |||||||||||||| ||||||| ||||||||| ||||||  | ||||||||||||||||||    
T  28712663 ggggtcaaaactgctacagttgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaa 28712762  T
Q  551 ctgctattaagcctt 565  Q
    |||||||||||||||    
T  28712763 ctgctattaagcctt 28712777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 447 - 560
Target Start/End: Original strand, 4474266 - 4474378
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||  |||||| |||||||||||||||| || ||||||||| ||     
T  4474266 cttggggggccaaaactgctacagttgcaaaacttagagggcggttttgtaatttttt--ttagggggccaaaatcgcaacttcgtaaaagttaggagga 4474363  T
Q  546 gaaaactgctattaa 560  Q
    |||||||||||||||    
T  4474364 gaaaactgctattaa 4474378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 44585986 - 44586097
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||||||||  ||||||| |||||||||||||||| | |||||||||||||| ||    
T  44585986 gggggccaaaactgccacagaagcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaa 44586085  T
Q  549 aactgctattaa 560  Q
    ||||||||||||    
T  44586086 aactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 86758 - 86879
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||   |||||| ||||||| ||||||||||||||||  ||||||||||||    
T  86758 ccttgggggaccaaaactgctacagttgcaaaacttaggaggcggttttgtatattttttttcttagggggccaaaatcgcaacttcatgaaagttaggg 86857  T
Q  543 ggcgaaaactgctattaagcct 564  Q
    | |||||||| |||||||||||    
T  86858 gacgaaaactcctattaagcct 86879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 448 - 566
Target Start/End: Original strand, 54464360 - 54464480
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||| ||||||| ||||| ||||||| || ||||||||||||| |    
T  54464360 ttggggggccaaaactgccagagttgcaaaacttaggggccggttttgtagtttttttttcttagggggccaatatcgcaaattcgtgaaagttagggag 54464459  T
Q  545 cgaaaactgctattaagccttt 566  Q
    || |||||||||||||||||||    
T  54464460 cg-aaactgctattaagccttt 54464480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 448 - 563
Target Start/End: Complemental strand, 14856663 - 14856546
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||| | | |||||||||||||| |||||| ||||||||||||||  ||||||| | |||||||||||||| ||||||||||||| ||    
T  14856663 ttggggggccaaaactactatagttgcaaaacttatggggcgattttgtagttttttttcttagggagtcaaaatcgcaacttcgtgaaagttagggtgc 14856564  T
Q  546 gaaaactgctattaagcc 563  Q
    ||||||||||||||||||    
T  14856563 gaaaactgctattaagcc 14856546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 564
Target Start/End: Original strand, 38958046 - 38958158
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||   |||||||| || || |||||||||||||||||||||    
T  38958046 ggggtcaaaactgctacagttgcaaaacttagggggcggttttgtagttttttc-ttaggggctcaaaatcgtaatttcgtgaaagttagggggcgaaaa 38958144  T
Q  551 ctgctattaagcct 564  Q
    ||||||||||||||    
T  38958145 ctgctattaagcct 38958158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 451 - 565
Target Start/End: Original strand, 25902553 - 25902669
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||  ||||||||||| | |||||||||||||||||||  ||||||| |||||||||||||||| | |||||||||||||| ||    
T  25902553 gggggccaaaactgccacaaatgcaaaacttatgaggcggttttgtagttttttttcttagggagccaaaatcgcaactttgagaaagttagggggctaa 25902652  T
Q  549 aactgctattaagcctt 565  Q
    ||||| |||||||||||    
T  25902653 aactgatattaagcctt 25902669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 28204596 - 28204479
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||||| |||||||||| ||||||| |||| ||||||| || ||||||||||||||  |||||| | |||||||||||||| |||||||||| ||||    
T  28204596 ccttgggggaccaaaactgctacagttgtaaaatttagggggcgattttgtagtttttt--ttagggggtcaaaatcgcaacttcgtgaaagttaagggg 28204499  T
Q  545 cgaaaactgctattaagcct 564  Q
    ||||||||||||||||||||    
T  28204498 cgaaaactgctattaagcct 28204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 449 - 564
Target Start/End: Original strand, 28944164 - 28944280
Alignment:
Q  449 tggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||||||   |||||||||||||| ||| ||||||||||||||||| |||| |  ||||||||||||||||||| ||||||||||| | |    
T  28944164 tggggggccaaaactgctgaagttgcaaaacttaagggacggttttgtagtttttttcttatgaggccaaaatcgcaacttagtaaaagttaggggacaa 28944263  T
Q  548 aaactgctattaagcct 564  Q
    |||||||||||||||||    
T  28944264 aaactgctattaagcct 28944280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 12759618 - 12759496
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttc------cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||       |||| || ||||||||||||| ||  ||||||||||||||| |    
T  12759618 ggccaaaactgctacagttgcaaaacttaggggcggttttgtagtttttttttccttcttaaggggccaaaatcgcaatttcttgaaagttagggggcaa 12759519  T
Q  548 aaactgctattaagcctttattt 570  Q
    |||||| ||||||||||||||||    
T  12759518 aaactgttattaagcctttattt 12759496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 447 - 565
Target Start/End: Complemental strand, 43747396 - 43747277
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||||||| ||| ||||||||||||  ||||| |||||||||||||| ||||||| |||||||||||||||| || |||||||  || |    
T  43747396 cttggggggccaaaactgctacaattgcaaaacttattgggcgattttgtagtttttttcttagggggccaaaatcgcaacttcgtaaaagttataggac 43747297  T
Q  546 gaaaactgctattaagcctt 565  Q
    ||||||||||||||| ||||    
T  43747296 gaaaactgctattaaacctt 43747277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 566
Target Start/End: Complemental strand, 54719109 - 54718991
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| ||||||||||||||||| || ||||||| |||||||||   |||||   |||||||||||||| ||||||||||| ||     
T  54719109 ccttggggggccaaaactgctacagttgcaaaacttagaggacggttttatagtttttt---taggggttcaaaatcgcaacttcgtgaaagttagtgga 54719013  T
Q  545 cgaaaactgctattaagccttt 566  Q
    ||||||||||||||||||||||    
T  54719012 cgaaaactgctattaagccttt 54718991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 448 - 560
Target Start/End: Original strand, 46226887 - 46226998
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    ||||||||| |||||||| |||||||||||| ||| ||| |||||||||||||||||  |||||| | |||||||||||||| |||||||||||||| ||    
T  46226887 ttggggggctaaaactgctacagttgcaaaagttatgggacggttttgtagtttttt--ttagggggtcaaaatcgcaacttcgtgaaagttaggggacg 46226984  T
Q  547 aaaactgctattaa 560  Q
    ||||||||||||||    
T  46226985 aaaactgctattaa 46226998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 25154376 - 25154496
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactt-aggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||||||  | ||||||| |||||| |  |||||||||||    
T  25154376 ccttggggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttcttaggaggtcaaaatcacaactttggtaaagttagggg 25154475  T
Q  544 gcgaaaactgctattaagcct 564  Q
    |  ||||||||||||||||||    
T  25154476 gttaaaactgctattaagcct 25154496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 448 - 565
Target Start/End: Complemental strand, 14340850 - 14340731
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttt-tccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||| |||||||||||| ||| |||||||||||  |||||||||||||||||||| | | |||||  ||||||||| ||||| ||||||||||||||||    
T  14340850 ttgggaggccaaaactgctacaattgcaaaacttgtggggcggttttgtagtttttattcgtaggggaccaaaatcgtaacttcgtgaaagttagggggc 14340751  T
Q  546 gaaaactgctattaagcctt 565  Q
    ||||||| ||||||||||||    
T  14340750 gaaaactcctattaagcctt 14340731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 448 - 564
Target Start/End: Original strand, 14349309 - 14349423
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||||||||||||  |||||||||||||||| | ||| |||||||||||||||   ||||| |  ||||||||||||| || ||||||||||||||    
T  14349309 ttggggggccaaaactgttacagttgcaaaacttaagaggcagttttgtagtttttt---tagggggttaaaatcgcaacttcgtaaaagttagggggcg 14349405  T
Q  547 aaaactgctattaagcct 564  Q
    ||||||||||||||||||    
T  14349406 aaaactgctattaagcct 14349423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 448 - 562
Target Start/End: Complemental strand, 47189713 - 47189599
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||| |||||||||  |||||| ||||||||||||||||  | |||||||||| |||    
T  47189713 ttggagggccaaaactgctacagttgcaaaacttaaggggcggttttatagttttttt-ttagggggccaaaatcgcaacttcataaaagttagggagcg 47189615  T
Q  547 aaaactgctattaagc 562  Q
    ||||||| ||||||||    
T  47189614 aaaactgttattaagc 47189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 578613 - 578722
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| |  ||||||||| ||| |||    
T  578613 gggggccaaaactaccacaggtgaaaaacttaggggcggttttgtagttttttttcttaggg-gccaaaatcgcaactttggaaaagttaggaggctaaa 578711  T
Q  550 actgctattaa 560  Q
    |||| ||||||    
T  578712 actgatattaa 578722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 35359184 - 35359299
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtt--ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||  |||| ||||||| ||||||||  |||||| ||||||||||| ||| ||    
T  35359184 gggggccaaaactgccatagttgcaaaacttagagggcgattttgtagtttgtttttcttaggg-gccaaaattacaacttcgtgaaagttagagggtga 35359282  T
Q  548 aaactgctattaagcct 564  Q
    ||||| |||||||||||    
T  35359283 aaactactattaagcct 35359299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 452 - 562
Target Start/End: Complemental strand, 27178252 - 27178141
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||| ||| | | ||||||||||||||| |||||||||||||| |||| ||||||| |||||| ||||||||| || ||||||||||| |||||    
T  27178252 ggggccaaaattgctatatttgcaaaacttagggtgcggttttgtagttatttttcttagggggccaaa-tcgcaacttcgtaaaagttaggggacgaaa 27178154  T
Q  550 actgctattaagc 562  Q
    |||||||||||||    
T  27178153 actgctattaagc 27178141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 448 - 563
Target Start/End: Original strand, 53184715 - 53184831
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    ||||||||||||||||||  ||||||||||  |||  ||||  |||||||||||||| ||||||  || ||||||||||||| || |||||||||| |||    
T  53184715 ttggggggccaaaactgcttcagttgcaaattttaatgggcaattttgtagtttttttcttaggtggcaaaaatcgcaacttcgtaaaagttagggagcg 53184814  T
Q  547 aaaactgctattaagcc 563  Q
    |||||||||||||||||    
T  53184815 aaaactgctattaagcc 53184831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 562
Target Start/End: Original strand, 1814758 - 1814866
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||    ||||||||||||||| ||||||||||||||||| |||||||  ||||||||| ||||| |  ||||||||| ||| |||    
T  1814758 gggggccaaaactgcca----tgcaaaacttaggggacggttttgtagtttttttcttaggggtccaaaatcgaaactttggaaaagttaggaggctaaa 1814853  T
Q  550 actgctattaagc 562  Q
    |||||||||||||    
T  1814854 actgctattaagc 1814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 452 - 562
Target Start/End: Complemental strand, 19404509 - 19404399
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||| |||||||| | |||||||||| ||||||| | |||||||||||||||| |||| | || ||||||||||||| |||||||||||||| ||||||    
T  19404509 ggggctaaaactgctatagttgcaaaatttagggggcagttttgtagttttttc-ttagagggctaaaatcgcaacttcgtgaaagttaggggacgaaaa 19404411  T
Q  551 ctgctattaagc 562  Q
    ||| ||||||||    
T  19404410 ctgttattaagc 19404399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 475 - 563
Target Start/End: Complemental strand, 33329701 - 33329611
Alignment:
Q  475 aaaacttaggggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    |||| ||||||||||||||||||||||||   ||||||| | |||||||||||||| || |||||||| ||||||||||||||||||||||    
T  33329701 aaaagttaggggcggttttgtagtttttttttcttagggggtcaaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaagcc 33329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 36677597 - 36677523
Alignment:
Q  490 ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||||||||||  |||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  36677597 ttttgtagttttttttttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcct 36677523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 36687679 - 36687605
Alignment:
Q  490 ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||||||||||  |||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  36687679 ttttgtagttttttttttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcct 36687605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 44433264 - 44433381
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtag--ttttttccttaggg-tgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||  |||||| |||||||  ||| |||||||||||  |  |||||||||||||     
T  44433264 gggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttttttcttagggaggccgaaatcgcaactgtggaaaagttagggggct 44433363  T
Q  547 aaaactgctattaagcct 564  Q
    ||||||||||||||||||    
T  44433364 aaaactgctattaagcct 44433381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 451 - 566
Target Start/End: Complemental strand, 38957960 - 38957842
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||||||   ||||  | ||||||||||||||||    ||| ||||| ||| |    
T  38957960 gggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtttttttttcttaaagggccaaaatcgcaactttaaaaaaattaggaggcta 38957861  T
Q  548 aaactgctattaagccttt 566  Q
    |||||||||||||||||||    
T  38957860 aaactgctattaagccttt 38957842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 552
Target Start/End: Original strand, 25248887 - 25248988
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||  |||||  |||||||||||||||| |||||| |||  ||||||||    
T  25248887 gggggccaaaactgctacagttgcaaaacttaaagggcggatttgtagtttttt-tttaggaggccaaaatcgcaacttcgtgaaaattaaagggcgaaa 25248985  T
Q  550 act 552  Q
    |||    
T  25248986 act 25248988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 44436507 - 44436449
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  44436507 ccttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttttt 44436449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 563
Target Start/End: Complemental strand, 1814662 - 1814550
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||| |||||||| | |||||||||||||| |||| |||||||||||||||| || ||||  | ||||| ||||||| || |||||||||||||||||    
T  1814662 gggggcaaaaactgctatagttgcaaaacttaaggggtggttttgtagtttttttct-aggggactaaaattgcaacttcgtaaaagttagggggcgaaa 1814564  T
Q  550 actgctattaagcc 563  Q
    ||| |||| |||||    
T  1814563 actactatgaagcc 1814550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 567
Target Start/End: Original strand, 33329817 - 33329940
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc------cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||||  ||||| ||||||||| |||||||||||||||||       ||||||| |||||||||||||| | | ||||||| ||||    
T  33329817 gggggccaaaactgccacaaatgcaatacttaggggacggttttgtagttttttttttcttcttagggggccaaaatcgcaacgttgggaaagttggggg 33329916  T
Q  544 gcgaaaactgctattaagccttta 567  Q
    |  |||||||||||||| ||||||    
T  33329917 gttaaaactgctattaaaccttta 33329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 454 - 561
Target Start/End: Complemental strand, 48348365 - 48348257
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||| |  ||||||||||||||||||| | ||||| |||||||||  |||     ||||||||||||||| || ||||||||||||||||||||    
T  48348365 ggccaaaactactgcagttgcaaaacttaggggaccgttttatagttttttttttaaaaaaccaaaatcgcaacttcgtaaaagttagggggcgaaaact 48348266  T
Q  553 gctattaag 561  Q
    |||||||||    
T  48348265 gctattaag 48348257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 562
Target Start/End: Complemental strand, 50802772 - 50802660
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcg-gttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| |||||||||||||  |||||||||||||||   ||||||||||||||| ||||||| ||||||||| |||||| |  ||||||| | ||  |||    
T  50802772 gggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagaggttaaa 50802673  T
Q  550 actgctattaagc 562  Q
    |||||||||||||    
T  50802672 actgctattaagc 50802660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 562
Target Start/End: Original strand, 50873105 - 50873217
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcg-gttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| |||||||||||||  |||||||||||||||   ||||||||||||||| ||||||| ||||||||| |||||| |  ||||||| | ||  |||    
T  50873105 gggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagaggttaaa 50873204  T
Q  550 actgctattaagc 562  Q
    |||||||||||||    
T  50873205 actgctattaagc 50873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 561
Target Start/End: Complemental strand, 22494666 - 22494555
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||| |||||||  ||||||| |||| |||||||||||||||||||| ||||||| | |||||||| ||||| |  ||| ||||||||  |||    
T  22494666 gggggccaaaattgccacaaatgcaaaatttagagggcggttttgtagtttttttcttagggggtcaaaatcgtaactttggaaaatttagggggttaaa 22494567  T
Q  550 actgctattaag 561  Q
    | ||||||||||    
T  22494566 attgctattaag 22494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 560
Target Start/End: Complemental strand, 42686588 - 42686485
Alignment:
Q  458 aaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgcta 556  Q
    |||||||||||||   |||||| |||||| ||||||||||||||||| ||||||| | ||||||||||||||  ||||| ||||| ||  ||||||||||    
T  42686588 aaaactgccacagggacaaaacataggggacggttttgtagtttttttcttagggggtcaaaatcgcaactttttgaaacttaggaggttaaaactgcta 42686489  T
Q  557 ttaa 560  Q
    ||||    
T  42686488 ttaa 42686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 563
Target Start/End: Original strand, 52008454 - 52008560
Alignment:
Q  457 caaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgct 555  Q
    ||||||||| | ||||||||||||||  |||| ||||||||||||||| |||||||  ||||||| ||||||| ||| |||||||| |||||||||| ||    
T  52008454 caaaactgctatagttgcaaaacttacagggcagttttgtagtttttttcttaggg-accaaaattgcaacttcgtggaagttaggaggcgaaaactact 52008552  T
Q  556 attaagcc 563  Q
    || |||||    
T  52008553 ataaagcc 52008560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 446 - 563
Target Start/End: Complemental strand, 3192891 - 3192774
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||| |||||| ||||| | ||||||| |||||||||||| |||||||||||||||||||||||||    |||| |||||||| |  ||||||| ||||    
T  3192891 ccttgaggggcctaaactactacagttgaaaaacttaggggtcggttttgtagttttttccttaggggatgaaaagcgcaactttgaaaaagtta-gggg 3192793  T
Q  545 cgaaaactgctattaagcc 563  Q
    | |||||| ||||||||||    
T  3192792 ctaaaacttctattaagcc 3192774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 447 - 564
Target Start/End: Complemental strand, 25902519 - 25902401
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||||||  |||||||||||| |||||||| ||||||||||| |||| ||||| | | |||||||  ||||| |  |||||||| ||||    
T  25902519 cttggggggccaaaactgttacagttgcaaaatttaggggcagttttgtagttttttttcttagtggggcaaaatcataactttggaaaagttagagggc 25902420  T
Q  546 gaaaactgctattaagcct 564  Q
     ||||||  ||||||||||    
T  25902419 taaaactagtattaagcct 25902401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 452 - 564
Target Start/End: Original strand, 15978893 - 15979005
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||||||  |||  | ||||||||||||| ||    ||||||| ||||| ||||    
T  15978893 ggggccaaaactgctatagttgcaaaacttagggggcggttttgtagtttttt-tttatagggccaaaatcgcaattttagaaaagttacggggctaaaa 15978991  T
Q  551 ctgctattaagcct 564  Q
    || |||||||||||    
T  15978992 ctactattaagcct 15979005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 570
Target Start/End: Complemental strand, 20432264 - 20432183
Alignment:
Q  490 ttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttattt 570  Q
    ||||||||||||||  |||||||  ||||| ||||||||| || ||||||||||||| ||||||||||||||||||| ||||    
T  20432264 ttttgtagttttttttcttaggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagccttaattt 20432183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 44436598 - 44436651
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  44436598 gggggccaaaactgccacagatgcaaaacttagggggcggttttgtagtttttt 44436651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 54719197 - 54719309
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||| |||  |||  ||||||||||||||| |||||||||||||||||| |||||  |||||||||||||||| |   |||||||||||  |||    
T  54719197 gggggccaaacctggtacatatgcaaaacttagggggcggttttgtagttttttc-ttaggaggccaaaatcgcaactttgaataagttagggggttaaa 54719295  T
Q  550 actgctattaagcc 563  Q
    ||||| ||||||||    
T  54719296 actgccattaagcc 54719309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 451 - 565
Target Start/End: Complemental strand, 3916543 - 3916429
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||| |||||| ||||||| ||||||||| |||||||   ||| ||| ||||  ||    
T  3916543 gggggccaaaactgccacagatgcaaaacttagtgagcgattttgtagttttttttcttaggg-gccaaaatcacaacttaaaaaaattta-ggggttaa 3916446  T
Q  549 aactgctattaagcctt 565  Q
    |||||||||||||||||    
T  3916445 aactgctattaagcctt 3916429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 25843479 - 25843411
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaa 519  Q
    |||| ||||||||||||||| |||||||||||||||  | ||||||||||||| ||||||| |||||||    
T  25843479 ggggaccaaaactgccacagatgcaaaacttagggggcgatttgtagtttttttcttagggggccaaaa 25843411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 44433174 - 44433054
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc---cttagggtgccaaaatcgcaacttagtgaaagttagg 541  Q
    ||||||| |||||||||||| | ||||||||||| |||||| ||||||| |||||||||    ||||||  ||||||||| |||||| |||||||||| |    
T  44433174 ccttgggaggccaaaactgctatagttgcaaaacctagggggcggttttttagttttttttttcttagga-gccaaaatcacaacttcgtgaaagtta-g 44433077  T
Q  542 gggcgaaaactgctattaagcct 564  Q
    ||| ||||| |||||||||||||    
T  44433076 gggtgaaaattgctattaagcct 44433054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 578525 - 578431
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||||||  | |||||||||||||||||||  || |||||||||||||| ||||||| | ||||||| |||||| |||||||||| ||||||    
T  578525 ggggccaaaaccactacagttgcaaaacttagggaacgattttgtagtttttttcttaggg-gtcaaaatctcaacttcgtgaaagttaaggggcg 578431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 28712561 - 28712490
Alignment:
Q  458 aaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    |||||||| |||| ||||||||||||||| || |||||||||||||| ||||||| ||||||||| ||||||    
T  28712561 aaaactgctacagatgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaactt 28712490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 44585905 - 44585839
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtag-ttttttccttaggg 511  Q
    |||||||||| |||||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  44585905 cttggggggcgaaaactgctacagttgcaaaatttagggggcggttttgtagtttttttccttaggg 44585839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 563
Target Start/End: Complemental strand, 53255049 - 53254963
Alignment:
Q  478 acttaggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    ||||||||||||||||||||||| |||  |||| | ||||||||||||||||  |||||  |||||||| ||||||| |||||||||    
T  53255049 acttaggggcggttttgtagtttatttagttagagggccaaaatcgcaacttcttgaaacatagggggccaaaactgttattaagcc 53254963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 550
Target Start/End: Original strand, 3916640 - 3916734
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||| | ||| ||||||||||||||| |||||||||||||||||  |||||   |||||||| |||||| || ||||||| || |||||||    
T  3916640 ggccaaaactactacaattgcaaaacttagggacggttttgtagtttttt--ttaggtgaccaaaatcacaacttcgtaaaagttaaggagcgaaaa 3916734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 563
Target Start/End: Complemental strand, 38177290 - 38177178
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||| || ||||  |||||||||||   || ||||||||| ||||||| |||||| |||||||||||||||| | |||||||| ||||| |||    
T  38177290 gggggccaaaaatgtcacatatgcaaaacttaaaaggtggttttgtaattttttc-ttagggggccaaaatcgcaactttgggaaagttaaggggctaaa 38177192  T
Q  550 actgctattaagcc 563  Q
    | ||| ||||||||    
T  38177191 attgccattaagcc 38177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 8024891 - 8024835
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||||| ||||||    
T  8024891 ttggggggccaaaactgctacagttgcaaaacgtagggggcggttttgtaatttttt 8024835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 454 - 564
Target Start/End: Complemental strand, 49787361 - 49787249
Alignment:
Q  454 ggccaaaactgccacagttgcaaaactt-aggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    ||||||||||||||||| |||||||||| ||||  |||||| ||| |||||| |||||||  |||| || ||||||| |  |||||||| |||| ||||     
T  49787361 ggccaaaactgccacagatgcaaaacttgagggatggttttatagttttttttcttaggggaccaagattgcaactttggaaaagttagagggctaaaat 49787262  T
Q  552 tgctattaagcct 564  Q
    |||||||||||||    
T  49787261 tgctattaagcct 49787249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 449 - 496
Target Start/End: Complemental strand, 51315610 - 51315562
Alignment:
Q  449 tggggggccaaaactgccacagttgcaaaactta-ggggcggttttgta 496  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  51315610 tggggggccaaaactgctacagttgcaaaacttagggggcggttttgta 51315562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 7218351 - 7218466
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-----cttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| || |||||||||| | ||| |||||||||||||      ||||||| ||||||||||||||||    ||| ||||||||    
T  7218351 gggggccaaaactgccacagatgtaaaacttaggagacggctttgtagtttttttttcttcttagggagccaaaatcgcaactttaaaaaaattaggggg 7218450  T
Q  545 cgaaaactgctattaa 560  Q
    | |||| |||||||||    
T  7218451 ctaaaattgctattaa 7218466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 552
Target Start/End: Complemental strand, 29512627 - 29512558
Alignment:
Q  484 gggcggttttgtagt-tttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||||||| ||||| |||||||  ||||||||||||||| |  ||||||||||||| ||||||    
T  29512627 gggcggttttgtagtattttttcttaggggtccaaaatcgcaactttgaaaaagttagggggctaaaact 29512558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 560
Target Start/End: Complemental strand, 43586682 - 43586572
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||| ||||||| |  ||| |||||||||||||||| |  ||| |||||||||| |||||  |||||||||||||||  || ||||||| ||||||    
T  43586682 cttgggggaccaaaaccgttacaattgcaaaacttagggg-gactttatagttttttc-ttaggaggccaaaatcgcaactccgtaaaagttaaggggcg 43586585  T
Q  547 aaaactgctattaa 560  Q
     |||||||||||||    
T  43586584 -aaactgctattaa 43586572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 43747480 - 43747533
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||||||||||    
T  43747480 gggggccaaaactgccataaatgcaaaacttagggggcggttttgtagtttttt 43747533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 53255258 - 53255339
Alignment:
Q  484 gggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||||||||||||| |||  |||||| ||||||||||||||||  | |||  |||| ||| ||||||||||||||||||    
T  53255258 gggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaagcct 53255339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 562
Target Start/End: Complemental strand, 54464276 - 54464163
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||| |||||||||||||  ||||||||||||||| | ||||||||||| |||| |||| ||   |||||||| |||||    ||||||||||| | ||    
T  54464276 gggggtcaaaactgccacatatgcaaaacttaggggacagttttgtagttctttttcttaagggatcaaaatcgtaactttagaaaagttaggggactaa 54464177  T
Q  549 aactgctattaagc 562  Q
    ||||||||||||||    
T  54464176 aactgctattaagc 54464163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 564
Target Start/End: Original strand, 44127547 - 44127662
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttcct--tagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||| ||||||||  ||||||||||| |||||||| || ||||||||||||||  |  ||| | |||||||||||||||| | |||| |||| | |  ||    
T  44127547 ggggtcaaaactgttacagttgcaaagcttagggggcgattttgtagtttttttttcgtagagggccaaaatcgcaactttgagaaaattagagagttaa 44127646  T
Q  549 aactgctattaagcct 564  Q
    ||||||||||||||||    
T  44127647 aactgctattaagcct 44127662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 528
Target Start/End: Complemental strand, 7218263 - 7218188
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    |||||||||||| | |||||||||||||||| |||  ||||||| |||||| | ||| | ||||||||||||||||    
T  7218263 ggccaaaactgctatagttgcaaaacttaggaggcaattttgtaatttttttcatagagagccaaaatcgcaactt 7218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 565
Target Start/End: Original strand, 14856756 - 14856870
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||| ||||  ||||||| |||||||  |||||| |||| |||| ||  ||| |||||||||||| ||| | |||||||||||||  | |    
T  14856756 gggggccaaaactggcacatgtgcaaaatttaggggatggttttttagtatttttctcgggg-gccaaaatcgcatctttgggaaagttagggggttata 14856854  T
Q  550 actgctattaagcctt 565  Q
    ||||||||||| ||||    
T  14856855 actgctattaaacctt 14856870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 562
Target Start/End: Original strand, 43586762 - 43586872
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||| ||||| ||||  |||||||| |||| | || ||||||||||||||| |||||  |||||||||||||||| |  |||||| || ||| ||||    
T  43586762 ggggccataactgtcacaaatgcaaaacataggagacgattttgtagttttttc-ttaggaggccaaaatcgcaactttgaaaaagttgggaggctaaaa 43586860  T
Q  551 ctgctattaagc 562  Q
    || |||||||||    
T  43586861 ctactattaagc 43586872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 86687 - 86578
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| |||  |||||||||||||| || ||||| |||||||||| ||||    ||||||| |||||||    ||||||||||||| |||    
T  86687 gggggccaaaactgctacaagtgcaaaacttagggcgcagttttatagttttttc-ttagtagaccaaaatagcaacttttaaaaagttagggggctaaa 86589  T
Q  550 actgctattaa 560  Q
    | |||||||||    
T  86588 attgctattaa 86578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 453 - 502
Target Start/End: Complemental strand, 1938428 - 1938378
Alignment:
Q  453 gggccaaaactgccacagttgcaaaactt-aggggcggttttgtagttttt 502  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||| ||||    
T  1938428 gggccaaaactaccacaggtgcaaaacttaaggggcggttttgtaggtttt 1938378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 451 - 528
Target Start/End: Original strand, 14340934 - 14341012
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    |||||||||||||||||||  ||||||||||||||| |  ||||||||||||||  ||||   | ||||||||||||||    
T  14340934 gggggccaaaactgccacaaatgcaaaacttaggggactattttgtagttttttttttagatggtcaaaatcgcaactt 14341012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 20432384 - 20432497
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaa-cttaggggcgg-ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||| |||||||||||||| || |||| ||||||||  | ||||||||||||||| ||||||  |||||||| ||||||    ||||||||||||  ||    
T  20432384 gggggtcaaaactgccacagatgtaaaaacttagggggtgattttgtagttttttc-ttaggggaccaaaatcacaacttttgaaaagttagggggttaa 20432482  T
Q  549 aactgctattaagcc 563  Q
    || ||||||||||||    
T  20432483 aaatgctattaagcc 20432497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 566
Target Start/End: Original strand, 38178720 - 38178770
Alignment:
Q  516 aaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttt 566  Q
    ||||||||||||| ||| ||||||||||||||||| |||| |||| |||||    
T  38178720 aaaatcgcaactttgtgtaagttagggggcgaaaattgctgttaaaccttt 38178770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 44624733 - 44624684
Alignment:
Q  456 ccaaaactgccacagttgcaaaacttagggg--cggttttgtagtttttt 503  Q
    ||||||||||||||| |||||||| ||||||  |||||||||||||||||    
T  44624733 ccaaaactgccacagatgcaaaacataggggatcggttttgtagtttttt 44624684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 44624833 - 44624883
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtttttt 503  Q
    |||| ||||||| |||||||||||||||||  |||||||||||||||||||    
T  44624833 ggccgaaactgctacagttgcaaaacttagatggcggttttgtagtttttt 44624883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 537 - 567
Target Start/End: Original strand, 44624887 - 44624917
Alignment:
Q  537 ttagggggcgaaaactgctattaagccttta 567  Q
    |||||||||||||||||||||||||||||||    
T  44624887 ttagggggcgaaaactgctattaagccttta 44624917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 452 - 560
Target Start/End: Original strand, 48348459 - 48348569
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||| |||||||||||||  |||||||||| ||||||| |||||||||| |||| ||||  |  |||||||||||||||    ||||||||||||  |||    
T  48348459 ggggtcaaaactgccacatatgcaaaacttaaggggcgattttgtagttatttttcttaaaggaccaaaatcgcaactttaaaaaagttagggggataaa 48348558  T
Q  550 actgctattaa 560  Q
    ||| |||||||    
T  48348559 actactattaa 48348569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 27178347 - 27178400
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    ||||| ||||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  27178347 gggggtcaaaactaccacagatgcaaaacttagggggtggttttgtagtttttt 27178400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 562
Target Start/End: Original strand, 37755169 - 37755250
Alignment:
Q  482 aggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagc 562  Q
    |||||||||||| |||||| |||  |||||| || |||||||||||||  |||||  |||||||| |||||||| |||||||    
T  37755169 aggggcggttttatagtttatttagttagggggctaaaatcgcaacttcatgaaacatagggggccaaaactgcaattaagc 37755250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 3e-41; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 446 - 567
Target Start/End: Original strand, 4049917 - 4050039
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||| |||||| |||||||||| ||||    
T  4049917 ccttggggggccaaaactgctacagttgcaaaccttagggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtgaaagttaagggg 4050016  T
Q  545 cgaaaactgctattaagccttta 567  Q
    |||||||||||||||||||||||    
T  4050017 cgaaaactgctattaagccttta 4050039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 451 - 570
Target Start/End: Complemental strand, 14247407 - 14247287
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||  ||||||||| |||||| |||||||||||| |||||||    
T  14247407 gggggccaaaactgccacaattgcaaaacttatggggcggttttgtagtttttttcttaggcggccaaaatcacaacttcgtgaaagttaggtggcgaaa 14247308  T
Q  550 actgctattaagcctttattt 570  Q
    |||||||||||||||||||||    
T  14247307 actgctattaagcctttattt 14247287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 446 - 570
Target Start/End: Original strand, 20185112 - 20185236
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||  |||||| | |||||||||||||| |||||||||||||||    
T  20185112 ccttggggggccaaaactgctacagttgcaaaacttaggaggcggttttgtagttttttt-ttagggggtcaaaatcgcaacttcgtgaaagttaggggg 20185210  T
Q  545 cgaaaactgctattaagcctttattt 570  Q
    |||||||| ||||||| |||||||||    
T  20185211 cgaaaactactattaatcctttattt 20185236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 451 - 567
Target Start/End: Complemental strand, 28350230 - 28350112
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||||||||  ||||||| |||||||||| ||||| |||||||||||||||| ||    
T  28350230 gggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgtaacttcgtgaaagttagggggctaa 28350131  T
Q  549 aactgctattaagccttta 567  Q
    |||||||||||||||||||    
T  28350130 aactgctattaagccttta 28350112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 454 - 563
Target Start/End: Complemental strand, 36580384 - 36580274
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||  |||||||| |||||| |||||||||||||| ||||||||    
T  36580384 ggccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttttcttaggggaccaaaatcacaacttcgtgaaagttaggggccgaaaact 36580285  T
Q  553 gctattaagcc 563  Q
    |||||||||||    
T  36580284 gctattaagcc 36580274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 452 - 543
Target Start/End: Original strand, 28350345 - 28350436
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| ||||||||||||||    
T  28350345 ggggccaaaactgccacaggtgcaaaacttaggggcggttttgtagtttttttcttagggggccaaagtcgcaacttcgtgaaagttagggg 28350436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 451 - 572
Target Start/End: Original strand, 17876358 - 17876480
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| ||||||||||||||||  || |||||||||| |||||| |||| || |||||||||| ||||| ||||||||||||||| ||||    
T  17876358 gggggccaaaactgctacagttgcaaaacttaatggacggttttgtaatttttttcttaaggggccaaaatcgtaacttcgtgaaagttagggggtgaaa 17876457  T
Q  550 actgctattaagcctttatttaa 572  Q
    |||||||||||||||||| ||||    
T  17876458 actgctattaagcctttaattaa 17876480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 458 - 564
Target Start/End: Complemental strand, 41243749 - 41243643
Alignment:
Q  458 aaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctat 557  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||| |  ||||||||||||| |||||||||||    
T  41243749 aaaactgccacaaatgcaaaacttaggggcggttttgtagtttttttcttagggggctaaaattgcaactttggaaaagttagggggctaaaactgctat 41243650  T
Q  558 taagcct 564  Q
    |||||||    
T  41243649 taagcct 41243643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 455 - 561
Target Start/End: Complemental strand, 47909803 - 47909696
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    ||||||| |||||||| ||||||||||||||| || |||||||||||||| ||||||| || ||||||||||||| | |||||||||||||| |||||||    
T  47909803 gccaaaattgccacagatgcaaaacttagggggcgattttgtagtttttttcttagggggctaaaatcgcaactttgggaaagttagggggctaaaactg 47909704  T
Q  554 ctattaag 561  Q
    ||||||||    
T  47909703 ctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 453 - 563
Target Start/End: Original strand, 41243845 - 41243958
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||| | ||||||||||||||||| ||||| ||||||||||||||   |||||||||||||||||| ||||| |||||||||||||  |||||    
T  41243845 gggccaaaactactacagttgcaaaacttagtgggcgattttgtagtttttttttcttagggtgccaaaatcgtaactttgtgaaagttagggaccgaaa 41243944  T
Q  550 actgctattaagcc 563  Q
    ||||||||||||||    
T  41243945 actgctattaagcc 41243958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 448 - 561
Target Start/End: Original strand, 8074071 - 8074187
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||| ||||||||||||| ||||||||||||||| |||| |||||||||||||||||   |||| || || ||||||| ||||| |||||||||||||||    
T  8074071 ttggagggccaaaactgctacagttgcaaaactttggggacggttttgtagtttttttttcttatggggctaaaatcgtaacttcgtgaaagttaggggg 8074170  T
Q  545 cgaaaactgctattaag 561  Q
    |||||||||||||||||    
T  8074171 cgaaaactgctattaag 8074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 453 - 565
Target Start/End: Complemental strand, 28785869 - 28785754
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttcct--tagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||| | |||||||||||||||||||| |||||||||||||||||  |  ||||| |||||||||| ||||| ||||||||||||||||| ||    
T  28785869 gggccaaaactacaacagttgcaaaacttagggggcggttttgtagtttttttttcctagggggccaaaatcgtaacttcgtgaaagttagggggcggaa 28785770  T
Q  550 actgctattaagcctt 565  Q
    |||||||||| |||||    
T  28785769 actgctattatgcctt 28785754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 565
Target Start/End: Complemental strand, 15348064 - 15347952
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||| |||| |||||| ||||||||||||||| |||||||||||||||| ||||||| | ||||||||||||||   |||||||||||||| ||||    
T  15348064 gggggccataacttccacagatgcaaaacttaggggtggttttgtagtttttt-cttaggg-gtcaaaatcgcaactttaggaaagttagggggctaaaa 15347967  T
Q  551 ctgctattaagcctt 565  Q
    | |||||||||||||    
T  15347966 cggctattaagcctt 15347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 565
Target Start/End: Original strand, 15348157 - 15348274
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||||||   ||||| |   |||||||||||||| ||||||||||||||| ||    
T  15348157 gggggccaaaactgctacggttgcaaaacttagggggcggttttgtagtttttttttcttagaggatcaaaatcgcaacttcgtgaaagttagggggtga 15348256  T
Q  548 aaactgctattaagcctt 565  Q
    | ||||||||||||||||    
T  15348257 atactgctattaagcctt 15348274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 446 - 551
Target Start/End: Original strand, 5172719 - 5172827
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||| | |||||||||||||| || ||||||||||    
T  5172719 ccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagttttttttccttagggggtcaaaatcgcaacttcgtaaaagttaggg 5172818  T
Q  543 ggcgaaaac 551  Q
     | ||||||    
T  5172819 agtgaaaac 5172827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 454 - 560
Target Start/End: Original strand, 19645006 - 19645112
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||||| ||||||||||||||||| ||||  ||| ||| |||||| ||||||| |||||||||||||||| |||||||||| |||||||||| |    
T  19645006 ggccaaaactgctacagttgcaaaacttagagggcaatttggtaatttttttcttaggg-gccaaaatcgcaacttcgtgaaagttaaggggcgaaaatt 19645104  T
Q  553 gctattaa 560  Q
    ||||||||    
T  19645105 gctattaa 19645112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 454 - 562
Target Start/End: Original strand, 3247377 - 3247484
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||||||  ||| || ||||||||| |||||| |||||||||||||| |||||| |    
T  3247377 ggccaaaactgctacagttgcaaaatttaggaggcggttttgtagtttttt--ttatggggccaaaatcacaacttcgtgaaagttaggggacgaaaatt 3247474  T
Q  553 gctattaagc 562  Q
    | ||||||||    
T  3247475 gttattaagc 3247484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 28472574 - 28472631
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28472574 ccttggggggccaaaactgctacagttgcaaaacttaggggcggttttgtagtttttt 28472631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 447 - 566
Target Start/End: Original strand, 35250316 - 35250433
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||||||| |||||||||||||||| ||||| |||||| ||||||||  |||||| | |||||||||||||| || ||||||| |||||    
T  35250316 cttggggggccaaaactgctacagttgcaaaacttagggggcagttttgcagtttttt--ttagggggtcaaaatcgcaactttgtcaaagtta-ggggc 35250412  T
Q  546 gaaaactgctattaagccttt 566  Q
     ||||| |||||||| |||||    
T  35250413 aaaaaccgctattaaaccttt 35250433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 454 - 564
Target Start/End: Original strand, 15107195 - 15107304
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||  |||||| |||||||||| ||||| |  ||| ||||||||  ||||||    
T  15107195 ggccaaaactgccacaaatgcaaaacttagggagcggttttgtagtttttt--ttagggggccaaaatcgtaactttggaaaaattaggggggtaaaact 15107292  T
Q  553 gctattaagcct 564  Q
    ||||||||||||    
T  15107293 gctattaagcct 15107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 448 - 567
Target Start/End: Original strand, 18504438 - 18504557
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    ||||| |||||||||||| ||| |||||||||||| ||| ||||||| |||||||||  ||||||   ||||||||||||||  ||||||||||||| ||    
T  18504438 ttgggaggccaaaactgctacaattgcaaaacttaagggacggttttttagttttttt-ttaggggatcaaaatcgcaacttcatgaaagttaggggacg 18504536  T
Q  547 aaaactgctattaagccttta 567  Q
    ||||||| |||||||||||||    
T  18504537 aaaactgttattaagccttta 18504557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 11373964 - 11373846
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagtttttt--ccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    ||||||| |||||||  ||| ||||||||||||| ||| | ||||||||||||||||||  |||||||| | ||| |||||||||| || ||||||||||    
T  11373964 ccttgggaggccaaa--tgctacagttgcaaaacatagagagcggttttgtagttttttttccttaggg-gtcaagatcgcaacttcgtaaaagttaggg 11373868  T
Q  543 ggcgaaaactgctattaagcct 564  Q
    ||||||||||||||||||||||    
T  11373867 ggcgaaaactgctattaagcct 11373846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 21505734 - 21505613
Alignment:
Q  446 ccttggggggccaaaac-tgccacagttgcaaaacttaggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||||||||||||||  ||| | |||| |||||||||||||||||||||||||| |||| ||||  | ||| |||| ||||||| |||||||||| |||    
T  21505734 ccttggggggccaaaaaatgctatagttacaaaacttaggggcggttttgtagttttttttcttaaagggcccaaattgcaacttcgtgaaagttaaggg 21505635  T
Q  544 gcgaaaactgctattaagcctt 565  Q
     ||||| |||||||||||||||    
T  21505634 acgaaagctgctattaagcctt 21505613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 455 - 566
Target Start/End: Original strand, 3382025 - 3382137
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    ||||||||||| |||||||||||||||||| |||   ||||||||||||| |||| ||  |||||||| |||||| || ||||||||||||| |||||||    
T  3382025 gccaaaactgctacagttgcaaaacttaggaggcaaatttgtagtttttttcttaagggaccaaaatcacaacttcgtaaaagttagggggcaaaaactg 3382124  T
Q  554 ctattaagccttt 566  Q
     | ||||||||||    
T  3382125 atgttaagccttt 3382137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 450 - 542
Target Start/End: Complemental strand, 10097669 - 10097577
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||||||||||  |||||   ||||||||||||||| | |||| ||||||    
T  10097669 ggggggccaaaactgctacaattgcaaaacttaggggcgattttgtagttttttttttaggtgaccaaaatcgcaactttgagaaaattaggg 10097577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 564
Target Start/End: Original strand, 23826224 - 23826337
Alignment:
Q  456 ccaaaactgccacagttgcaaaacttaggggcgg--ttttgtag---ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||| ||||||||||||||||| ||  |  ||||||||   |||||| |||| || |||||||||||||||| |||||||||||||| | ||||    
T  23826224 ccaaaactgctacagttgcaaaacttagaggacgatttttgtagttttttttttcttaaggggccaaaatcgcaacttcgtgaaagttaggggacaaaaa 23826323  T
Q  551 ctgctattaagcct 564  Q
    ||||||||||||||    
T  23826324 ctgctattaagcct 23826337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 566
Target Start/End: Complemental strand, 48058974 - 48058858
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||  |||||||||||||| || ||||||||||||||  |||| || ||||||||| ||||||  ||||| ||||||||  |||    
T  48058974 ggggccaaaactgccacagaggcaaaacttaggggacgattttgtagttttttttcttaaggggccaaaatctcaacttgttgaaacttagggggttaaa 48058875  T
Q  550 actgctattaagccttt 566  Q
    ||||||||||| |||||    
T  48058874 actgctattaatccttt 48058858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 469 - 563
Target Start/End: Original strand, 20505229 - 20505323
Alignment:
Q  469 agttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    ||||||| |||||||||| |||||||||||||||||  |||||| ||||||||||||||||  | |||| ||||||| ||||||||||||||||||    
T  20505229 agttgcacaacttagggggcggttttgtagttttttt-ttagggggccaaaatcgcaacttcataaaagctagggggtgaaaactgctattaagcc 20505323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 560
Target Start/End: Original strand, 6792017 - 6792107
Alignment:
Q  472 tgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 560  Q
    ||||||||||||||| |||||||||||||||||  |||||||  ||||||||||||||| |  ||||||||||||| ||||||||||||||    
T  6792017 tgcaaaacttagggggcggttttgtagttttttttcttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 6792107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 35250232 - 35250118
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||| ||||||||| || || |||||||||||| |||||||||| ||||||||| |||| ||  ||||||||||||||| |  |||||||| |||| |||    
T  35250232 ggggtccaaaactgtcaaagatgcaaaacttagagggcggttttatagtttttttcttaagggaccaaaatcgcaactttggaaaagttagagggctaaa 35250133  T
Q  550 actgctattaagcct 564  Q
    ||| |||||||||||    
T  35250132 actactattaagcct 35250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 36903471 - 36903581
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||| |||||||| ||||||||||||||||||| || |||||||||||||||  ||| || |||||||||||||| | |  ||||||||||||  |||    
T  36903471 gggggctaaaactgctacagttgcaaaacttagggtgcagttttgtagtttttt--ttaagg-gccaaaatcgcaacattgaaaaagttagggggttaaa 36903567  T
Q  550 actgctattaagcc 563  Q
    ||||||||||||||    
T  36903568 actgctattaagcc 36903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 563
Target Start/End: Complemental strand, 6726370 - 6726258
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| |||||| |||||| ||| || || |||| ||||||||| ||||| | | |||||||||||||| ||||||| || |||||||||    
T  6726370 gggggccaaaactgctacagtttcaaaacatagagggggcttttatagtttttttcttagagggtcaaaatcgcaacttcgtgaaaggta-ggggcgaaa 6726272  T
Q  550 actgctattaagcc 563  Q
    |||| |||||||||    
T  6726271 actgttattaagcc 6726258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 9500101 - 9500213
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    ||||||||||||| |||||    ||||||||||||| |||||||||||||||||   |||||||  |||||||||||||||  ||||| ||||||||| |    
T  9500101 gggggccaaaactaccacaaggtcaaaacttagggggcggttttgtagtttttttttcttaggggaccaaaatcgcaacttcttgaaacttagggggcta 9500200  T
Q  548 aaactgctattaa 560  Q
    |||||||||||||    
T  9500201 aaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 18186651 - 18186763
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||| ||||||||||||||| ||||||||||| ||| ||||||| |||||||||   ||||||| | |||||||| ||||| |  ||||||||||||| |    
T  18186651 ggggaccaaaactgccacagatgcaaaacttaagggacggttttatagtttttttttcttagggggtcaaaatcgtaactttggaaaagttagggggcta 18186750  T
Q  548 aaactgctattaa 560  Q
    |||||||||||||    
T  18186751 aaactgctattaa 18186763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 20185031 - 20184915
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||| ||||  ||||||||||| | |||||||||||||||||||   ||||||| || ||||||||||||| |  |||||||||| || |    
T  20185031 gggggccaaaactggcacatatgcaaaacttaagaggcggttttgtagtttttttttcttagggggctaaaatcgcaactttggaaaagttagggagcta 20184932  T
Q  548 aaactgctattaagcct 564  Q
    |||||| ||||||||||    
T  20184931 aaactgttattaagcct 20184915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 467 - 543
Target Start/End: Complemental strand, 24433055 - 24432978
Alignment:
Q  467 acagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||| ||||||||||| | ||||||||||| ||||| ||||||| |||||||||||||||| ||||||||||||||    
T  24433055 acagttacaaaacttaggagacggttttgtagcttttttcttagggggccaaaatcgcaacttcgtgaaagttagggg 24432978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 454 - 560
Target Start/End: Complemental strand, 18186550 - 18186442
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||||  ||||    ||||||||||||||||  | |||||||||||||||||||    
T  18186550 ggccaaaactgctatagttgcaaaacttaggaggcggttttgtagttttttttcttaaaaggccaaaatcgcaacttcataaaagttagggggcgaaaac 18186451  T
Q  552 tgctattaa 560  Q
      |||||||    
T  18186450 cactattaa 18186442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 453 - 562
Target Start/End: Complemental strand, 36903374 - 36903261
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttaggggcggttttgtagtttttt----ccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||     ||||||  || ||||||||||||| |  ||||| |||| || ||    
T  36903374 gggccaaaactgccacagatggaaaacttaggggcggttttgtagtttttttttatcttaggaggctaaaatcgcaactttggaaaagtaagggagctaa 36903275  T
Q  549 aactgctattaagc 562  Q
    |||| |||||||||    
T  36903274 aactactattaagc 36903261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 563
Target Start/End: Complemental strand, 15029175 - 15029058
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttcc-ttagggtgccaaaatcgcaacttagtgaaagttagggggcg-- 546  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||||||   |||||| | |||||||||||||| |  |||||||||||  |      
T  15029175 gggggccaaaactgccacatgtgcaaaacttagggggcggttttgtagttttttttattagggggtcaaaatcgcaactttggaaaagttaggggttggt 15029076  T
Q  547 -aaaactgctattaagcc 563  Q
     |||||||||||||||||    
T  15029075 taaaactgctattaagcc 15029058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 517 - 563
Target Start/End: Original strand, 21748082 - 21748128
Alignment:
Q  517 aaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  21748082 aaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcc 21748128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 458 - 564
Target Start/End: Complemental strand, 45697599 - 45697486
Alignment:
Q  458 aaaactgccacagttgcaaaactta-ggggcggttttgtagttttttcctt------agggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||| |||||||||||| ||| |||||  |||||||||||||| |||      |||| |||||||||||||||| | |||||||||||| ||||||    
T  45697599 aaaactgctacagttgcaaaatttatggggcaattttgtagtttttttcttcttcttagggggccaaaatcgcaacttcgagaaagttaggggacgaaaa 45697500  T
Q  551 ctgctattaagcct 564  Q
    ||| ||||||||||    
T  45697499 ctgttattaagcct 45697486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 452 - 528
Target Start/End: Complemental strand, 3381975 - 3381898
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||| ||  | |||||||||||||    
T  3381975 ggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttttcttatgggactaaaatcgcaactt 3381898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 574
Target Start/End: Original strand, 21505821 - 21505942
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||||| |  |||||| | |||||| | |||||||||||||||  ||||||| |||||||||||||||| |  ||||||||||| | ||||||    
T  21505821 gccaaaactgccatatatgcaaagcatagggggcagttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttaggggactaaaact 21505920  T
Q  553 gctattaagcctttatttaaaa 574  Q
    |||||||  ||||| |||||||    
T  21505921 gctattattcctttttttaaaa 21505942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 560
Target Start/End: Original strand, 23746093 - 23746205
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttt------tccttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    ||||||||||| ||||||||||||||||| || ||||||||||||||||      | |||| || || ||||||||||||| || ||||||||||| |||    
T  23746093 gccaaaactgctacagttgcaaaacttagaggacggttttgtagttttttttttcttcttaaggggctaaaatcgcaacttcgtaaaagttaggggacga 23746192  T
Q  548 aaactgctattaa 560  Q
    || ||||||||||    
T  23746193 aagctgctattaa 23746205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 451 - 562
Target Start/End: Complemental strand, 28472501 - 28472391
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||| ||||||||||||   ||||||||||  ||||| ||||||||||||||| |||||| | |||||||||||||| |  ||||||| ||||| |||    
T  28472501 gggggcgaaaactgccacataagcaaaacttatagggcgattttgtagttttttc-ttagggggtcaaaatcgcaactttggaaaagtta-ggggctaaa 28472404  T
Q  550 actgctattaagc 562  Q
    |||||||||||||    
T  28472403 actgctattaagc 28472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 473 - 563
Target Start/End: Original strand, 48059168 - 48059260
Alignment:
Q  473 gcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    |||||||||||||| |||||||||||||||||  ||| ||||||||||||| ||||||  | ||| ||||||| | |||||||||||||||||    
T  48059168 gcaaaacttagggggcggttttgtagttttttttcttggggtgccaaaatcacaacttcttaaaacttaggggcctaaaactgctattaagcc 48059260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 452 - 563
Target Start/End: Original strand, 6726455 - 6726573
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttc------cttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||| |||||||||||||  |||||||||||||||  | ||||||||||||||       ||||||| ||| |||||||||||| ||||||||||||||     
T  6726455 gggggcaaaactgccacatgtgcaaaacttagggggtgattttgtagtttttttttctttcttagggggcctaaatcgcaacttcgtgaaagttagggga 6726554  T
Q  545 cgaaaactgctattaagcc 563  Q
    | ||||| |||||||||||    
T  6726555 caaaaacagctattaagcc 6726573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 452 - 567
Target Start/End: Complemental strand, 45718011 - 45717896
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    |||| |||||||| ||||| |||||||||||| |  | |||||||||||||| |||| || ||||||||| |||||| |  ||| ||||| ||| |||||    
T  45718011 ggggtcaaaactgacacagatgcaaaacttagagatgattttgtagtttttttcttaaggagccaaaatcacaactttggaaaaattaggaggctaaaac 45717912  T
Q  552 tgctattaagccttta 567  Q
    |||||| || ||||||    
T  45717911 tgctatcaatccttta 45717896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 560
Target Start/End: Complemental strand, 46265955 - 46265868
Alignment:
Q  474 caaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 560  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||  | ||| ||| ||||  ||||||||||||||    
T  46265955 caaaacttaggaggcggttttgtagtttttttcttagggggccaaaatcccaacttcttaaaacttaaggggttaaaactgctattaa 46265868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 451 - 565
Target Start/End: Original strand, 46266455 - 46266569
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| |||||||| ||||   |||||||||| ||| ||||||||||||||||  ||||||| | |||||| |||||||  ||||| |||||| || |||    
T  46266455 gggggtcaaaactgtcacaagggcaaaacttatggg-ggttttgtagttttttttcttaggggggcaaaattgcaacttcttgaaacttagggagctaaa 46266553  T
Q  550 actgctattaagcctt 565  Q
    ||||||||||||||||    
T  46266554 actgctattaagcctt 46266569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 21939331 - 21939389
Alignment:
Q  506 ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||| |||||||||||||||| |||| | ||||||||| ||||||||||||||||||    
T  21939331 ttagggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaagcct 21939389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 571
Target Start/End: Original strand, 36580475 - 36580596
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||| ||||| |||   |   |||||||||||||| |  |||||||  |||  |||    
T  36580475 gggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagcttttttcttgaaggatcaaaatcgcaactttgaaaaagttaaagggttaaa 36580574  T
Q  550 actgctattaagcctttattta 571  Q
    ||| ||||||| ||||||||||    
T  36580575 actactattaaacctttattta 36580596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 564
Target Start/End: Complemental strand, 3318424 - 3318317
Alignment:
Q  457 caaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgct 555  Q
    ||||| || ||||| ||||||||||| ||| |||||||||| ||||||  ||||||  ||||||||||||||| |  ||||||| ||||| |||||| ||    
T  3318424 caaaaatgtcacaggtgcaaaacttaagggacggttttgtaattttttt-ttaggggaccaaaatcgcaactttggaaaagttaaggggctaaaactcct 3318326  T
Q  556 attaagcct 564  Q
    |||||||||    
T  3318325 attaagcct 3318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 570
Target Start/End: Original strand, 7873864 - 7873952
Alignment:
Q  483 ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttattt 570  Q
    |||||||||||||||||| |||  |||||| ||||||||| ||| ||  |||||  |||||||| |||||||| |||||||||||||||    
T  7873864 ggggcggttttgtagtttatttagttagggagccaaaatcacaatttcttgaaacatagggggccaaaactgcaattaagcctttattt 7873952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 564
Target Start/End: Complemental strand, 42256692 - 42256581
Alignment:
Q  457 caaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttag-ggggcgaaaact 552  Q
    |||||||||||||  ||||||||||||||| ||||||| | |||||||   ||||||| || ||||||||||||| |  |||||||| ||||  ||||||    
T  42256692 caaaactgccacatgtgcaaaacttagggggcggttttattgtttttttttcttagggggctaaaatcgcaactttgaaaaagttaggggggttaaaact 42256593  T
Q  553 gctattaagcct 564  Q
    ||||||||||||    
T  42256592 gctattaagcct 42256581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 564
Target Start/End: Original strand, 17931935 - 17932041
Alignment:
Q  456 ccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgc 554  Q
    ||||||||| ||||| ||||||| |||| ||||| ||||||| ||||||   ||| | |||||||||||||||| |  ||||| ||| ||| ||||||||    
T  17931935 ccaaaactgacacagatgcaaaatttagagggcgattttgtattttttt---tagagggccaaaatcgcaactttggaaaagtgaggaggctaaaactgc 17932031  T
Q  555 tattaagcct 564  Q
    ||||||||||    
T  17932032 tattaagcct 17932041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 505 - 560
Target Start/End: Complemental strand, 20505156 - 20505101
Alignment:
Q  505 cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 560  Q
    ||||||| |||||| ||||||||| | |||||||||||||| ||||||||||||||    
T  20505156 cttagggggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaa 20505101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 448 - 528
Target Start/End: Complemental strand, 40872283 - 40872201
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaactt 528  Q
    |||| ||||| ||||||| |||||| ||||||||| ||| |||||||||||||||||  ||||||| | ||||||||||||||    
T  40872283 ttggagggcctaaactgctacagttacaaaacttatgggacggttttgtagttttttttcttagggggtcaaaatcgcaactt 40872201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 557
Target Start/End: Complemental strand, 13889567 - 13889461
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||| ||||||||||  || |||||||||||||| ||||||||||||||| ||||  ||||||  |||||||  |||||| |||||||||||| |  |||    
T  13889567 ggggtccaaaactgctgcacttgcaaaacttaggaggcggttttgtagttgttttttttaggggaccaaaattacaacttcgtgaaagttaggag--gaa 13889470  T
Q  549 aactgctat 557  Q
    |||||||||    
T  13889469 aactgctat 13889461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 528
Target Start/End: Complemental strand, 18504354 - 18504277
Alignment:
Q  454 ggccaaaactgccacagttgcaaaactta-ggggcggttttgtagt-tttttcctta-gggtgccaaaatcgcaactt 528  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||| ||||| |||| ||| ||||||||| ||||||    
T  18504354 ggccaaaactgccacatatgcaaaacttagggggcggttttgtagtattttttcttaggggggccaaaatcacaactt 18504277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 564
Target Start/End: Original strand, 45718089 - 45718186
Alignment:
Q  469 agttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||||||| || ||||||||||||||  ||||     ||||| ||||||||| |||||||||||| ||| |||| |||||||||||||    
T  45718089 agttgcaaaacttagggggcgattttgtagttttttttcttaattgaccaaattcgcaacttcgtgaaagttaggaggcaaaaattgctattaagcct 45718186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 448 - 511
Target Start/End: Complemental strand, 11374066 - 11374002
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttaggg 511  Q
    |||| ||||||||||||| | ||||||||||||||||| |  ||||||||||||||| |||||||    
T  11374066 ttggagggccaaaactgctaaagttgcaaaacttagggtgtagttttgtagtttttttcttaggg 11374002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 564
Target Start/End: Original strand, 14247509 - 14247615
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    |||||||||||||||  |||||||||||| || ||||||||||||||||   ||| || | | |||||||||||| |  ||||||| ||||  |||||||    
T  14247509 gccaaaactgccacatgtgcaaaacttagcggacggttttgtagttttt---ttaaggggtcgaaatcgcaactttggaaaagtta-ggggataaaactg 14247604  T
Q  554 ctattaagcct 564  Q
    |||||||||||    
T  14247605 ctattaagcct 14247615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 482 - 565
Target Start/End: Original strand, 43078035 - 43078119
Alignment:
Q  482 aggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctt 565  Q
    |||||| |||||||||||| |||  |||||| ||||||||||||||||  |||||   ||||||| ||| |||||||||||||||    
T  43078035 aggggctgttttgtagtttatttaattagggggccaaaatcgcaacttcttgaaacagagggggccaaatctgctattaagcctt 43078119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 482 - 565
Target Start/End: Original strand, 43092012 - 43092096
Alignment:
Q  482 aggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctt 565  Q
    ||||||||||||||||||| |||  |||||| |||||||| | |||||  |||||  |||||||| ||| |||||||||||||||    
T  43092012 aggggcggttttgtagtttatttagttagggggccaaaattgtaacttcttgaaacatagggggccaaatctgctattaagcctt 43092096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 563
Target Start/End: Original strand, 24679043 - 24679158
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||||| | | | |||| ||||||||| | |||||||| ||| |||  |||||| ||||||||||||| ||  |||||  |||||||| |    
T  24679043 ggggggccaaaactgcaaaaatggcaatacttagggggctgttttgtattttattttgttagggggccaaaatcgcaatttcttgaaacatagggggcca 24679142  T
Q  548 aaactgctattaagcc 563  Q
    |||||| |||||||||    
T  24679143 aaactgttattaagcc 24679158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 40872353 - 40872400
Alignment:
Q  457 caaaactgccacagttgcaaaacttagggg-cggttttgtagtttttt 503  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||    
T  40872353 caaaactgccacatatgcaaaacttaggggacggttttgtagtttttt 40872400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 282858 - 282916
Alignment:
Q  506 ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||| ||||||||||||||||  |||||  |||| ||| ||||||||||||||||||    
T  282858 ttagggggccaaaatcgcaacttcttgaaacataggaggccaaaactgctattaagcct 282916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 327435 - 327493
Alignment:
Q  506 ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||| ||||||||||||||||  |||||  |||||||| | ||||||||||||||||    
T  327435 ttagggggccaaaatcgcaacttcttgaaacatagggggccacaactgctattaagcct 327493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 560
Target Start/End: Complemental strand, 4049817 - 4049709
Alignment:
Q  457 caaaactgccacagttgcaaa-acttagggg-cggttttgtagttttttc---cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    |||||||||||||| |||||| ||||||||  |||||||||||||||||    |||| || ||||||||||||||||    |||||||| |||| |||||    
T  4049817 caaaactgccacagatgcaaagacttagggaacggttttgtagttttttttttcttaaggggccaaaatcgcaactttagaaaagttagtgggctaaaac 4049718  T
Q  552 tgctattaa 560  Q
    |||| ||||    
T  4049717 tgctgttaa 4049709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 483 - 564
Target Start/End: Complemental strand, 7873590 - 7873508
Alignment:
Q  483 ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||||||| |||  |||||| |||||||||||||||   |||||  |||||||  |||||||| |||||||||    
T  7873590 ggggcggttttgtagtttatttagttagggggccaaaatcgcaactccttgaaacatagggggtcaaaactgcaattaagcct 7873508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 461 - 525
Target Start/End: Original strand, 8662825 - 8662891
Alignment:
Q  461 actgccacagttgcaaaactta-ggggcggttttgtagtttttt-ccttagggtgccaaaatcgcaa 525  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||  ||||||  |||||||||||||    
T  8662825 actgctacagttgcaaaacttatggggctgttttgtagttttttatcttaggaggccaaaatcgcaa 8662891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 482 - 563
Target Start/End: Complemental strand, 10691380 - 10691298
Alignment:
Q  482 aggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    |||||| |||||||||||| |||  |||||| ||||||||||||||||  |||||  |||||||| |||| ||| ||||||||    
T  10691380 aggggcagttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaattgcaattaagcc 10691298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 2e-39; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 451 - 565
Target Start/End: Original strand, 12766415 - 12766530
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||| ||||    
T  12766415 gggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttttagggggccaaaatcgcaacttcgtgaaagttagggggtgaaa 12766514  T
Q  550 actgctattaagcctt 565  Q
    ||||||||||||||||    
T  12766515 actgctattaagcctt 12766530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 3579708 - 3579594
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||  ||| || |||||||||||||||| |||||||||| ||| |||||    
T  3579708 gggggccaaaagtgctacagttgcaaaacttagggggcggttttgtagttttttttttacggggccaaaatcgcaacttcgtgaaagttaagggacgaaa 3579609  T
Q  550 actgctattaagcct 564  Q
    |||||||||||||||    
T  3579608 actgctattaagcct 3579594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 446 - 561
Target Start/End: Original strand, 28011321 - 28011436
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||   |||||||||||||| ||||||||||||||    
T  28011321 ccttgtggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttctcttaggga--caaaatcgcaacttcgtgaaagttagggg 28011418  T
Q  544 gcgaaaactgctattaag 561  Q
    | ||||||||||||||||    
T  28011419 gtgaaaactgctattaag 28011436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 447 - 563
Target Start/End: Original strand, 33401251 - 33401367
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||  |||||| |||||||||| ||||| || ||||||||||||     
T  33401251 cttggggggccaaaactgctacagttgcaaaacttaggggacagttttgtagttttttt-ttagggagccaaaatcgtaacttcgtaaaagttagggggt 33401349  T
Q  546 gaaaactgctattaagcc 563  Q
    ||||||||||||||||||    
T  33401350 gaaaactgctattaagcc 33401367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 450 - 566
Target Start/End: Original strand, 1377407 - 1377523
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||  |||||||||||||||||||  | ||||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||    
T  1377407 ggggggccaaaactgttacagttgcaaaacttagggaacagttttgtagtttttttcttaggg-gccaaaatcgcaacttcgtgaaagttaggggacgaa 1377505  T
Q  549 aactgctattaagccttt 566  Q
    ||||| |||||| |||||    
T  1377506 aactgatattaaaccttt 1377523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 450 - 566
Target Start/End: Original strand, 1385155 - 1385271
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||  |||||||||||||||||||  | ||||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||    
T  1385155 ggggggccaaaactgttacagttgcaaaacttagggaacagttttgtagtttttttcttaggg-gccaaaatcgcaacttcgtgaaagttaggggacgaa 1385253  T
Q  549 aactgctattaagccttt 566  Q
    ||||| |||||| |||||    
T  1385254 aactgatattaaaccttt 1385271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 448 - 556
Target Start/End: Complemental strand, 18031050 - 18030944
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||| ||||||| ||| |||||||||||||||||||||| ||||||||||||||  |||||  |||||||||||||||| ||||||||||||||| ||    
T  18031050 ttggggagccaaaattgctacagttgcaaaacttaggggcgattttgtagtttttt--ttaggaggccaaaatcgcaacttcgtgaaagttagggggaga 18030953  T
Q  548 aaactgcta 556  Q
    |||||||||    
T  18030952 aaactgcta 18030944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 239041 - 238929
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| || ||||||||||||||||| || ||||||||||||||  |||||  | |||||||||||||| |||||| |||||||||||||    
T  239041 gggggccaaaactgctacggttgcaaaacttaggggacgattttgtagtttttt--ttaggaggtcaaaatcgcaacttcgtgaaaattagggggcgaaa 238944  T
Q  550 actgctattaagcct 564  Q
    |||||||||||||||    
T  238943 actgctattaagcct 238929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 10727394 - 10727509
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||| ||||||||| |||||| |  ||||||||||||| ||    
T  10727394 gggggccaaaactgccacagatgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcacaactttggaaaagttagggggctaa 10727493  T
Q  549 aactgctattaagcct 564  Q
    ||||||||||| ||||    
T  10727494 aactgctattatgcct 10727509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 451 - 565
Target Start/End: Complemental strand, 30349462 - 30349347
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||| |||||||   |||||||||||||| | ||||||||| |||| |||    
T  30349462 gggggtcaaaactaccacagatgcaaaacttaaggggcggttttgtagtttttttcttaggggctcaaaatcgcaactttgggaaagttagagggctaaa 30349363  T
Q  550 actgctattaagcctt 565  Q
    ||||||||||||||||    
T  30349362 actgctattaagcctt 30349347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 10727309 - 10727189
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||| ||||||   |||||||| |||||| |  ||||||||| |    
T  10727309 ccttggggggccaaaactgctacagttgcaaaacttagagggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgctaaagttaggag 10727210  T
Q  544 gcgaaaactgctattaagcct 564  Q
    |||||||||||||||||||||    
T  10727209 gcgaaaactgctattaagcct 10727189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 451 - 556
Target Start/End: Complemental strand, 2853541 - 2853435
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagtta-gggggcgaa 548  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||| |||||||||| ||||| |||    
T  2853541 ggggaccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttt-cttagggggcgaaaatcgcaacttcgtgaaagttatgggggtgaa 2853443  T
Q  549 aactgcta 556  Q
    ||||||||    
T  2853442 aactgcta 2853435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 448 - 570
Target Start/End: Original strand, 17248839 - 17248962
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||||| ||| ||||||||||| ||| |||||||||||  |||||| |||| || ||||||||||||||||  | ||||||| |||||    
T  17248839 ttggggggccaaaactgctacaattgcaaaacttggggacggttttgtagtttttttttcttatggggccaaaatcgcaacttcctaaaagtta-ggggc 17248937  T
Q  546 gaaaactgctattaagcctttattt 570  Q
    || ||||||||||||| ||||||||    
T  17248938 gacaactgctattaagtctttattt 17248962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 452 - 564
Target Start/End: Complemental strand, 33399897 - 33399785
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||||||||  || ||||||||||| | |||||||||||||||| ||||| | |||||||||||||||| |  ||||||| ||||| ||||    
T  33399897 ggggccaaaactgccacaaatgtaaaacttagggtccggttttgtagtttttttcttagagggccaaaatcgcaactttggaaaagtta-ggggctaaaa 33399799  T
Q  551 ctgctattaagcct 564  Q
    ||||||||||||||    
T  33399798 ctgctattaagcct 33399785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 448 - 562
Target Start/End: Complemental strand, 2840906 - 2840790
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgta-gttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||||||  ||||||  ||||||  ||||||||||||||| || |||||| | | ||    
T  2840906 ttggggggccaaaactgctacaattgcaaaacttaggggacggttttgtattttttttttttaggggaccaaaatcgcaactttgtaaaagttggagagc 2840807  T
Q  546 gaaaactgctattaagc 562  Q
    |||||||||||||||||    
T  2840806 gaaaactgctattaagc 2840790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 559
Target Start/End: Original strand, 26601666 - 26601769
Alignment:
Q  457 caaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgct 555  Q
    ||||||||| |||||||||||| ||||||| ||||||| ||||||||| |||| || ||  |||||||||||| |||||||||||| ||| |||||||||    
T  26601666 caaaactgctacagttgcaaaatttagggggcggttttatagtttttttcttaaggggcagaaatcgcaacttcgtgaaagttaggaggcaaaaactgct 26601765  T
Q  556 atta 559  Q
    ||||    
T  26601766 atta 26601769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 451 - 563
Target Start/End: Complemental strand, 6036758 - 6036644
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcg-gttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||  |||||||||||||||   ||||||||  |||||| ||||||| | |||||||||||||| ||| ||||| | |||||||    
T  6036758 gggggccaaaactgccacatatgcaaaacttaggggatagttttgtaactttttttcttagggggtcaaaatcgcaacttcgtggaagtttgcgggcgaa 6036659  T
Q  549 aactgctattaagcc 563  Q
    |||||||||||||||    
T  6036658 aactgctattaagcc 6036644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 474 - 563
Target Start/End: Complemental strand, 5003178 - 5003089
Alignment:
Q  474 caaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    ||||||||||||| |||||| ||||||||| ||||||  | ||||||||||||||  | ||||||||||||||||||||| |||||||||    
T  5003178 caaaacttaggggtggttttatagtttttttcttaggaagtcaaaatcgcaacttcttaaaagttagggggcgaaaactgttattaagcc 5003089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 452 - 559
Target Start/End: Complemental strand, 17532364 - 17532254
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc---cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||    ||||| | |||||| ||||||||| | |||||||||||||| |    
T  17532364 ggggccaaaactgccacaggtgcaaaacttaaggggcggttttgtagttttttttttcttagagagccaaa-tcgcaactttgggaaagttagggggcta 17532266  T
Q  548 aaactgctatta 559  Q
    ||| ||||||||    
T  17532265 aaaatgctatta 17532254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 559
Target Start/End: Original strand, 20474905 - 20475014
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||  |||| ||   |||||||||||||| |  ||||||||||||| |||    
T  20474905 gggggccaaaactgccacagatgcaaaacttagggggcgttttgtagttttttttcttaagggatcaaaatcgcaactttgaaaaagttagggggctaaa 20475004  T
Q  550 actgctatta 559  Q
    | ||||||||    
T  20475005 attgctatta 20475014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 2853615 - 2853731
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtg-ccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||||||||  || |||||||||||| |||||||||||||||||  ||||||| | ||||||| ||||||| | |||||||||| ||  |    
T  2853615 gggggccaaaactgccacatatgaaaaacttagggggcggttttgtagttttttttcttaggggggccaaaattgcaactttgagaaagttaggaggtta 2853714  T
Q  548 aaactgctattaagcct 564  Q
    |||||||||||||||||    
T  2853715 aaactgctattaagcct 2853731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 563
Target Start/End: Complemental strand, 266235 - 266122
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||| ||||||||| |||||||||||||||| |||||  |||||||||| |||| ||||||| |||||||| ||| ||| | ||||||| |||||| ||    
T  266235 gggggtcaaaactgctacagttgcaaaacttaaggggcaattttgtagttatttttcttaggg-gccaaaattgcagctttgggaaagtttgggggctaa 266137  T
Q  549 aactgctattaagcc 563  Q
    |||||||||||||||    
T  266136 aactgctattaagcc 266122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 459 - 564
Target Start/End: Original strand, 30349563 - 30349671
Alignment:
Q  459 aaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgct 555  Q
    ||||||| |||||||||||||||| | | || ||||||||||||||   ||||||| |||||||||||||||| |  ||||||||||| | |||||||||    
T  30349563 aaactgctacagttgcaaaacttatgagacgattttgtagtttttttttcttagggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgct 30349662  T
Q  556 attaagcct 564  Q
    |||||||||    
T  30349663 attaagcct 30349671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 452 - 543
Target Start/End: Original strand, 266312 - 266403
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| |||||| |||| ||  |||||||||||| || | ||||||||||||    
T  266312 ggggccaaaactgccacaggtgcaaaacttaaggggcggttttgtaatttttttctta-ggacccaaaatcgcaattttgagaaagttagggg 266403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 562
Target Start/End: Original strand, 6036860 - 6036971
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| |||||||||||||  ||||||||||||||| | ||||||||||||| | ||||||  ||||||||||||||||    ||||||| ||||| |||    
T  6036860 gggggtcaaaactgccacatatgcaaaacttaggggacagttttgtagttttcttcttaggaggccaaaatcgcaactttagaaaagtta-ggggctaaa 6036958  T
Q  550 actgctattaagc 562  Q
    |||||||||||||    
T  6036959 actgctattaagc 6036971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 447 - 553
Target Start/End: Original strand, 32143447 - 32143555
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||| |||||| ||||||||||||||||| ||||  |||||||||| |||| ||||| | | ||||||||||||||  | ||||||||||||    
T  32143447 cttggggggccagaactgctacagttgcaaaacttagagggcaattttgtagttatttttcttagagggtcaaaatcgcaacttcataaaagttaggggg 32143546  T
Q  545 cgaaaactg 553  Q
     ||||||||    
T  32143547 tgaaaactg 32143555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 451 - 566
Target Start/End: Original strand, 2203352 - 2203467
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||| | |||||||||||||||| ||||| ||||| |||||||||  |||||| | |||| ||||||||| |  ||||||| || |  |||    
T  2203352 gggggccaaaactactacagttgcaaaacttagggggcagttttatagtttttt-tttagggcgtcaaagtcgcaactttgaaaaagttaaggagttaaa 2203450  T
Q  550 actgctattaagccttt 566  Q
    |||||||||||||||||    
T  2203451 actgctattaagccttt 2203467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 455 - 560
Target Start/End: Original strand, 239149 - 239256
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttagggg---cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    ||||||||||| |||| ||| ||||||| |||   || |||||||||||||| |||||||  ||||| ||||||||| | |||||||||||||  |||||    
T  239149 gccaaaactgcaacaggtgctaaacttatgggggacgattttgtagtttttttcttaggggaccaaa-tcgcaactttgagaaagttagggggttaaaac 239247  T
Q  552 tgctattaa 560  Q
    |||||||||    
T  239248 tgctattaa 239256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 503
Target Start/End: Complemental strand, 32143372 - 32143319
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  32143372 gggggccaaaactgccacaggtgcaaaacttaaggggcggttttgtaatttttt 32143319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 566
Target Start/End: Original strand, 8223937 - 8224047
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    |||||||||| || || ||||||||||||||| |||||||||||||||||  ||||||   ||||||||||||||    |||||||   ||  |||||||    
T  8223937 gccaaaactgtcagaggtgcaaaacttaggggacggttttgtagtttttt--ttaggggatcaaaatcgcaactttagaaaagttaataggtcaaaactg 8224034  T
Q  554 ctattaagccttt 566  Q
    |||||||||||||    
T  8224035 ctattaagccttt 8224047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 26311604 - 26311657
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||  |||||||||| ||||| ||||||||||||||||    
T  26311604 gggggccaaaactgccacatatgcaaaacttaaggggtggttttgtagtttttt 26311657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 565
Target Start/End: Complemental strand, 12798812 - 12798725
Alignment:
Q  478 acttaggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctt 565  Q
    ||||||||||||||||||| ||| |||  |||||  || |||||||||||||  |||||  |||||||| |||||||||||||||||||    
T  12798812 acttaggggcggttttgtattttattttgttagga-gcaaaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcctt 12798725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 563
Target Start/End: Complemental strand, 17248748 - 17248636
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||| | ||| |||||||||||| |||||||||||  |||||||  ||||| |   ||||||||||||||    ||||||||| ||| ||||    
T  17248748 gggccaaaactgtcgcagatgcaaaacttagagggcggttttgaggttttttttcttagaggatcaaaatcgcaactttaaaaaagttaggaggctaaaa 17248649  T
Q  551 ctgctattaagcc 563  Q
    |||||||||||||    
T  17248648 ctgctattaagcc 17248636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 564
Target Start/End: Complemental strand, 2203237 - 2203186
Alignment:
Q  513 gccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||||| | ||||||||||| || |||| |||||||||||||    
T  2203237 gccaaaatcgcaactttgggaaagttagggagctaaaattgctattaagcct 2203186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 544
Target Start/End: Original strand, 5003283 - 5003374
Alignment:
Q  455 gccaaaactgccacagttgcaaaactta-ggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||||||||||| |||||||||||| |||||  |||||| | |||||| ||||||  || ||||||||||||| | |||||||| ||||    
T  5003283 gccaaaactgccacaattgcaaaacttagggggcaattttgttgttttttttcttaggaagctaaaatcgcaactttgggaaagttaagggg 5003374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 503
Target Start/End: Complemental strand, 18604216 - 18604165
Alignment:
Q  453 gggccaaaactgccacagttgcaaaac-ttaggggcggttttgtagtttttt 503  Q
    ||||||||||||||||||  ||||||| || |||||||||||||||||||||    
T  18604216 gggccaaaactgccacaggggcaaaactttgggggcggttttgtagtttttt 18604165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 2e-39; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 447 - 561
Target Start/End: Complemental strand, 23891777 - 23891662
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||| ||    
T  23891777 cttggggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtgaaagttagggagc 23891678  T
Q  546 gaaaactgctattaag 561  Q
    ||||||||||||||||    
T  23891677 gaaaactgctattaag 23891662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 39642319 - 39642198
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttcctt-agggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||  || || | |||||||||||||||| ||||||||||||||    
T  39642319 ccttggggggccaaaactgctacaattgcagaacttagggggcggttttgtagtttttttatttagagggccaaaatcgcaacttcgtgaaagttagggg 39642220  T
Q  544 gcgaaaactgctattaagcctt 565  Q
    ||||||||||||||||||||||    
T  39642219 gcgaaaactgctattaagcctt 39642198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 451 - 567
Target Start/End: Complemental strand, 3377615 - 3377497
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||||||  ||||||| |||||||||||||||| |  ||||||||||||| ||    
T  3377615 gggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttggaaaagttagggggctaa 3377516  T
Q  549 aactgctattaagccttta 567  Q
    |||||||||||||||||||    
T  3377515 aactgctattaagccttta 3377497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 446 - 563
Target Start/End: Original strand, 3377707 - 3377825
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||| | ||||| ||||||||| |||||| | |||||||||||||    
T  3377707 ccttggagggccaaaactgctaaagttgcaaaacttaggggacggttttgtagtttttttcctagggggccaaaatcacaactttgggaaagttaggggg 3377806  T
Q  545 cgaaaactgctattaagcc 563  Q
    | |||||||||||||||||    
T  3377807 ctaaaactgctattaagcc 3377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 23220757 - 23220876
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||||| |||||||||| ||||||| |||||||||||| ||||||||||||||||| |  ||||  ||||||||| ||||| || ||||||||||||    
T  23220757 ccttgggggaccaaaactgctacagttgtaaaacttagggggcggttttgtagtttttttcagaggggaccaaaatcgtaacttcgtaaaagttaggggg 23220856  T
Q  545 cgaaaactgctattaagcct 564  Q
    ||||||||||||| ||||||    
T  23220857 cgaaaactgctatcaagcct 23220876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 41997753 - 41997643
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||| ||| |||| || |||||||||||||||| |||||| ||||||||| |||    
T  41997753 gggggccaaaactgctacagttgcaaaacttatgaggcggttttgtagttgttttcttatggggccaaaatcgcaactttgtgaaaattagggggcaaaa 41997654  T
Q  550 actgctattaa 560  Q
    | |||||||||    
T  41997653 attgctattaa 41997643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 45739049 - 45738935
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| | ||||||| |||||| | ||||||||||| |  |||    
T  45739049 gggggccaaaactgccatagatgcaaaacttaaggggcggttttgtagttttttccttagggggtcaaaatcacaactttgagaaagttagggagttaaa 45738950  T
Q  550 actgctattaagcct 564  Q
    | |||||||||||||    
T  45738949 attgctattaagcct 45738935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 453 - 564
Target Start/End: Complemental strand, 25085510 - 25085398
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||  ||||||| | ||||||||||||||  ||||||||||||||||||||    
T  25085510 gggccaaaattgctacagttgtaaaacttagagggcggttttgtagttttttttcttaggg-gtcaaaatcgcaactttatgaaagttagggggcgaaaa 25085412  T
Q  551 ctgctattaagcct 564  Q
    ||||||||||||||    
T  25085411 ctgctattaagcct 25085398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 12960964 - 12960845
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||  || ||  |||||||||||||||| |  |||||||| |||    
T  12960964 ccttggggggccaaaactgctatagttgcaaaacttaggaggcggttttgtagttttttttttgggaggccaaaatcgcaactttgaaaaagttagcggg 12960865  T
Q  545 cgaaaactgctattaagcct 564  Q
    | ||||||| ||||||||||    
T  12960864 ctaaaactgttattaagcct 12960845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 14979001 - 14979114
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||| |||||||| | |||||||||||| ||||||| |||||||||||| |||| ||||||  |||||||| |||||||  |||||||||||||||||||    
T  14979001 ggggtccaaaactactacagttgcaaaatttagggggcggttttgtagtatttttcttaggaggccaaaattgcaacttcatgaaagttagggggcgaaa 14979100  T
Q  550 actgctattaagcc 563  Q
    ||| ||||||||||    
T  14979101 acttctattaagcc 14979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 455 - 562
Target Start/End: Original strand, 16874707 - 16874816
Alignment:
Q  455 gccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtg-ccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| | | ||||||| ||||||| | |||||||||||||  ||||||    
T  16874707 gccaaaactgccacagatgcaaaacttatggggcggttttgtagtttttttcttagagggtccaaaattgcaactttgagaaagttagggggttaaaact 16874806  T
Q  553 gctattaagc 562  Q
    ||||||||||    
T  16874807 gctattaagc 16874816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 560
Target Start/End: Original strand, 45739131 - 45739244
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| |||||||||||||||| ||||| |||||||| ||||||  |||||  |||||||||||||||| ||||||||||  ||     
T  45739131 ccttggggggccaaaactgctacagttgcaaaacttatggggcagttttgtaatttttt--ttaggaggccaaaatcgcaacttcgtgaaagttaaagga 45739228  T
Q  545 cgaaaactgctattaa 560  Q
    |||||||| |||||||    
T  45739229 cgaaaactactattaa 45739244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 17760885 - 17761007
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactt-aggggcggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||  |||||| |||||||   |||||| ||||||| || ||||||| |     
T  17760885 ccttggggggccaaaactgctacaattgcaaaacttaaggggcggttttgtagtttttttttcttaggggatcaaaattgcaacttcgtaaaagttaaga 17760984  T
Q  543 ggcgaaaactgctattaagcctt 565  Q
    | |||||||||||||||||||||    
T  17760985 gacgaaaactgctattaagcctt 17761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 446 - 560
Target Start/End: Original strand, 50401568 - 50401682
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||| |||||| |||| ||||||||||||||||| || ||||||||||||||||| |||| || |||||||||||||||| |  ||| ||| ||||    
T  50401568 ccttggggagccaaa-ctgctacagttgcaaaacttagaggacggttttgtagtttttttcttaaggagccaaaatcgcaacttcgaaaaaattaagggg 50401666  T
Q  545 cgaaaactgctattaa 560  Q
    ||||||||||||||||    
T  50401667 cgaaaactgctattaa 50401682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 454 - 566
Target Start/End: Complemental strand, 17760795 - 17760679
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttc---cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||||||    ||||||| |||||||||||||||| | | |||||||||||| |||    
T  17760795 ggccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttttttcttagggggccaaaatcgcaactttgaggaagttagggggctaaa 17760696  T
Q  550 actgctattaagccttt 566  Q
     ||||||||||||||||    
T  17760695 gctgctattaagccttt 17760679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 450 - 566
Target Start/End: Original strand, 46573026 - 46573144
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    ||||| |||||||||| |||||||||||||||||||| | || ||||||||||||  |||||||  ||||||||||||||| || |||||||| || | |    
T  46573026 gggggaccaaaactgctacagttgcaaaacttagggggcagtgttgtagttttttttcttaggggaccaaaatcgcaacttcgtaaaagttagaggacaa 46573125  T
Q  548 aaactgctattaagccttt 566  Q
    |||||||||||||||||||    
T  46573126 aaactgctattaagccttt 46573144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 448 - 560
Target Start/End: Complemental strand, 6569643 - 6569530
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||||||||||||| ||| |||||||| || ||||||||||||||| |||||| ||||||| | ||||||| ||| || || ||| ||||| ||||    
T  6569643 ttggggggccaaaactgctacaattgcaaaattttaggggcggttttgtaatttttttcttagggggtcaaaatcacaattttgtaaaaattaggaggcg 6569544  T
Q  547 aaaactgctattaa 560  Q
    ||||||||||||||    
T  6569543 aaaactgctattaa 6569530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 50226511 - 50226390
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttt-ttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||||| | |||| | ||||||||||| |||||||||||| || || ||||||| |||||||||||||||| |  |||||||||||    
T  50226511 ccttggggggccaaaactgctatagttccgaaacttagggggcggttttgtagtattctttcttagggggccaaaatcgcaactttgaaaaagttagggg 50226412  T
Q  544 gcgaaaactgctattaagcctt 565  Q
    || |||||||  ||||||||||    
T  50226411 gctaaaactgtaattaagcctt 50226390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 452 - 563
Target Start/End: Complemental strand, 14978909 - 14978797
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||| |||||| ||||||||||||||| | |||||||||||||||  | | ||  ||||||||||||||| |  ||||||||||||| ||||    
T  14978909 ggggccaaaactaccacaggtgcaaaacttagggggcagttttgtagtttttttttgaaggacccaaaatcgcaactttggaaaagttagggggctaaaa 14978810  T
Q  551 ctgctattaagcc 563  Q
    |||||||||||||    
T  14978809 ctgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 445 - 564
Target Start/End: Complemental strand, 18216805 - 18216685
Alignment:
Q  445 cccttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||| |||||||||| | ||||| ||||||||| |||| |||||| |||||||| ||||||| |||||||| | |||||  | |||||||| ||    
T  18216805 cccttgggggtccaaaactgctatagttggaaaacttagagggctgttttgaagtttttttcttagggggccaaaattgtaacttcataaaagttagagg 18216706  T
Q  544 gcgaaaactgctattaagcct 564  Q
    |||||||||| ||||||||||    
T  18216705 gcgaaaactgttattaagcct 18216685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 450 - 566
Target Start/End: Original strand, 1096648 - 1096767
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaacttagggg-cggttttgt--agttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||  | |||||| |||| || || |||||||||| || ||||||||||| | |||    
T  1096648 ggggggccaaaactgctacagttgcaaagcttaggggacggttttgtaaattttttttcttaaggggctaaaatcgcaatttcgtgaaagttagagagcg 1096747  T
Q  547 aaaactgctattaagccttt 566  Q
    |||||||| ||||| |||||    
T  1096748 aaaactgcaattaaaccttt 1096767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 452 - 561
Target Start/End: Complemental strand, 1096580 - 1096469
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttag-gggcggttttgt-agttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||  ||||||  ||||||||||||||| |  ||||||| ||||| |||    
T  1096580 ggggccaaaactgccacagatgcgaaacttagagggcggttttgttagttttttttttaggggaccaaaatcgcaactttggaaaagttaaggggctaaa 1096481  T
Q  550 actgctattaag 561  Q
    |||| |||||||    
T  1096480 actgttattaag 1096469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 451 - 561
Target Start/End: Complemental strand, 18632429 - 18632319
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||| ||||  |||||||||||| ||||  ||||||||||||||| |||||| | |||||||||||||| |||||||||| ||| | |||    
T  18632429 gggggccaaaactgtcacaaatgcaaaacttagagggcaattttgtagttttttc-ttagggagtcaaaatcgcaactttgtgaaagttaagggactaaa 18632331  T
Q  550 actgctattaag 561  Q
    ||||| ||||||    
T  18632330 actgcaattaag 18632319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 455 - 560
Target Start/End: Original strand, 12961049 - 12961155
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    |||||||||||||||||||||||| ||||||| |  |||||||||||||| ||||||   ||||||||||||||| |  ||| ||||| ||| |||||||    
T  12961049 gccaaaactgccacagttgcaaaatttaggggacaattttgtagtttttttcttaggaaaccaaaatcgcaactttgaaaaaattaggaggctaaaactg 12961148  T
Q  554 ctattaa 560  Q
    |||||||    
T  12961149 ctattaa 12961155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 452 - 560
Target Start/End: Original strand, 6320782 - 6320891
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactta---ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||| ||||||| ||||||||||||||||   ||||||||||  ||||||||| ||||||| ||||||||||||||||  | ||||||| ||||||||    
T  6320782 ggggccgaaactgctacagttgcaaaacttagggggggcggtttcatagtttttt-cttagggggccaaaatcgcaacttcttaaaagtta-ggggcgaa 6320879  T
Q  549 aactgctattaa 560  Q
    ||||| ||||||    
T  6320880 aactggtattaa 6320891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 8009911 - 8010030
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||||||||||||||| ||||  |||||||||||||||  | ||||||| |||||| ||| |||  |||||||  |||||| || ||||||||| ||    
T  8009911 ccttggggggccaaaactgtcacaaatgcaaaacttaggggatgattttgtaatttttttcttcgggaaccaaaattacaacttcgtaaaagttaggagg 8010010  T
Q  545 cgaaaactgctattaagcct 564  Q
    | |||||| |||||||||||    
T  8010011 ctaaaactactattaagcct 8010030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 27864280 - 27864185
Alignment:
Q  457 caaaactgccacagttgcaaaacttag--gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||| |||||||||||||||||  |||| |||||||||||||||  ||||||   |||||||||||||| |||||||||||| | ||||||||    
T  27864280 caaaactgctacagttgcaaaacttagaggggcagttttgtagtttttt--ttaggggatcaaaatcgcaacttcgtgaaagttaggagacgaaaact 27864185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 448 - 564
Target Start/End: Original strand, 25486409 - 25486527
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||||| | ||||| |||||||||||| |   ||| |||||| ||| | ||  | || ||||||||||||| ||||||||||||||||    
T  25486409 ttggggggccaaaactgctatagttgtaaaacttaggggacaaatttatagtttattttcataaagagctaaaatcgcaacttcgtgaaagttagggggc 25486508  T
Q  546 gaaaactgctattaagcct 564  Q
     ||||||||||||||||||    
T  25486509 aaaaactgctattaagcct 25486527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 457 - 564
Target Start/End: Original strand, 27864361 - 27864472
Alignment:
Q  457 caaaactgccacagttgcaaaacttaggggcggttttgtagttttt----tccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||| || ||||| ||||||||||||||||||||| |||||||||    | ||||||| |||||||| ||||||| |  |||||||||| || ||||||    
T  27864361 caaaattggcacagatgcaaaacttaggggcggtttggtagttttttttcttcttagggggccaaaattgcaactttggaaaagttagggagctaaaact 27864460  T
Q  553 gctattaagcct 564  Q
    ||| ||||||||    
T  27864461 gctgttaagcct 27864472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 565
Target Start/End: Complemental strand, 7579778 - 7579661
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttc-cttagggtg-ccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||| |||| |||||||  |||||||||||| ||||||||||||||||||||  ||||||| | |||||||||||||||   |||||||| ||||  |    
T  7579778 gggggcaaaaattgccacaagtgcaaaacttagcgggcggttttgtagttttttttcttaggggggccaaaatcgcaacttttggaaagttaaggggtta 7579679  T
Q  548 aaactgctattaagcctt 565  Q
    ||||||||||||| ||||    
T  7579678 aaactgctattaaacctt 7579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 453 - 557
Target Start/End: Original strand, 25085595 - 25085698
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    |||||||||||||||||| | |||||||| ||| |||| ||||||||||||| ||||||| ||||||||| |||||| |  ||||||||||||| ||||     
T  25085595 gggccaaaactgccacaggtacaaaacttggggtgcggatttgtagtttttt-cttaggg-gccaaaatcacaactttggaaaagttagggggctaaaat 25085692  T
Q  552 tgctat 557  Q
    ||||||    
T  25085693 tgctat 25085698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 511
Target Start/End: Original strand, 39642408 - 39642469
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttaggg 511  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||||    
T  39642408 gggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtttttttcttaggg 39642469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 561
Target Start/End: Original strand, 18632603 - 18632651
Alignment:
Q  513 gccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaag 561  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||    
T  18632603 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 18632651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 452 - 567
Target Start/End: Complemental strand, 46912302 - 46912186
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||| ||||||| | ||| |||||||||||||||| | |||||||| ||||||  ||  |   ||||||||||||||| |||||||||| || |||||||    
T  46912302 ggggtcaaaacttctacaattgcaaaacttaggggacagttttgtaatttttttttttagagaccaaaatcgcaacttcgtgaaagttaaggagcgaaaa 46912203  T
Q  551 ctgctattaagccttta 567  Q
    |||||||||| ||||||    
T  46912202 ctgctattaaaccttta 46912186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 483 - 562
Target Start/End: Original strand, 5287808 - 5287887
Alignment:
Q  483 ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagc 562  Q
    |||||| ||||||| ||||||  |||||| |||||||||||||||| | |||||||| ||||  ||||||||||||||||    
T  5287808 ggggcgattttgtaattttttttttagggggccaaaatcgcaactttgagaaagttaaggggttaaaactgctattaagc 5287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 560
Target Start/End: Complemental strand, 17692833 - 17692730
Alignment:
Q  458 aaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgcta 556  Q
    ||||| ||||||  ||||||||||| |||||| ||||||| |||||| ||||||| || |||||| |||||| | |||||||||||||  |||| |||||    
T  17692833 aaaaccgccacaaatgcaaaacttaaggggcgattttgtattttttttcttagggggctaaaatcacaactttgagaaagttagggggttaaaattgcta 17692734  T
Q  557 ttaa 560  Q
    ||||    
T  17692733 ttaa 17692730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 560
Target Start/End: Complemental strand, 46572932 - 46572830
Alignment:
Q  459 aaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgcta 556  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||  ||||||| |||||||| |||| || | |||| ||||| ||| ||||||||||    
T  46572932 aaactgccacaaatgcaaaacttaggggacggttttgtagttttttttcttaggg-gccaaaattgcaattttgggaaaattaggaggctaaaactgcta 46572834  T
Q  557 ttaa 560  Q
    ||||    
T  46572833 ttaa 46572830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 454 - 563
Target Start/End: Original strand, 48319609 - 48319719
Alignment:
Q  454 ggccaaaactgccacagttgcaaaactta-ggggcggttttgt-agttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    |||||||||||| |||||||||||||||| ||||||| ||||| | |||||| || |  | | |||||| ||||||| |||||||||| ||| |||||||    
T  48319609 ggccaaaactgctacagttgcaaaacttagggggcggctttgtaattttttttctcattgagtcaaaatagcaactttgtgaaagtta-gggacgaaaac 48319707  T
Q  552 tgctattaagcc 563  Q
    ||||||||||||    
T  48319708 tgctattaagcc 48319719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 564
Target Start/End: Complemental strand, 3814841 - 3814759
Alignment:
Q  482 aggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||||||||||||||| ||  |||||| ||||||||| ||||||  |||||  |||||||| ||| ||||||||||||||    
T  3814841 aggggcggttttgtagtttattagttagggggccaaaatcacaacttcttgaaacatagggggctaaatctgctattaagcct 3814759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 560
Target Start/End: Complemental strand, 16874599 - 16874511
Alignment:
Q  474 caaaactta-ggggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 560  Q
    ||||||||| |||||||||||||||||||||   ||||||| | || ||||||||||| || |||||||||||||||||| |||||||||    
T  16874599 caaaacttaaggggcggttttgtagtttttttttcttaggg-gtcataatcgcaacttcgtaaaagttagggggcgaaaattgctattaa 16874511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 503
Target Start/End: Original strand, 7579859 - 7579915
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtttttt 503  Q
    |||||| |||||||||| | ||| |||||||| ||||||||||||||||||||||||    
T  7579859 cttgggaggccaaaactactacaattgcaaaatttaggggcggttttgtagtttttt 7579915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 40876977 - 40877065
Alignment:
Q  482 aggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttatt 569  Q
    ||||||||||||||||||| |||  |||||| ||||||||||||||||  || ||  |||||||| |||||||| |||||| |||||||    
T  40876977 aggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttggaacatagggggccaaaactgcaattaagtctttatt 40877065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 511
Target Start/End: Original strand, 1853654 - 1853713
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttaggg 511  Q
    |||||||||| || ||||  |||||||||||||||| ||||||||||||||| |||||||    
T  1853654 ggggccaaaattgtcacaaatgcaaaacttaggggcagttttgtagtttttttcttaggg 1853713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 492 - 575
Target Start/End: Complemental strand, 5287321 - 5287238
Alignment:
Q  492 ttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttatttaaaag 575  Q
    ||||| |||||| |||| || |||||||||||||||| |||||||||| ||| |||| ||||  |||||||||  |||||||||    
T  5287321 ttgtattttttttcttaaggggccaaaatcgcaacttcgtgaaagttaagggccgaacactgtaattaagcctaaatttaaaag 5287238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 16545766 - 16545879
Alignment:
Q  457 caaaactgccacagttgcaaaacttagggg-cggttttgtag---ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||| |||||||||||| ||||||| |||||||||||   ||||||| |||||  || ||||||||||||| || ||||||| |  |||||||||    
T  16545766 caaaactgctacagttgcaaaatttaggggacggttttgtagtttttttttctttaggaggctaaaatcgcaacttcgtaaaagttaagaagcgaaaact 16545865  T
Q  553 gctattaagccttt 566  Q
      |||||| |||||    
T  16545866 attattaaaccttt 16545879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 455 - 552
Target Start/End: Complemental strand, 44672422 - 44672326
Alignment:
Q  455 gccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||||||||  ||||||||||| |||||||||||||| |||||   |||||| | ||||||| |||||| | |||||||||| ||| ||||||    
T  44672422 gccaaaactgccacatatgcaaaacttagggggcggttttgtaattttt--gttagggggtcaaaatcacaactttgagaaagttaggaggctaaaact 44672326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 550
Target Start/End: Original strand, 49426193 - 49426291
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||||||||  |||||||||| |||  | ||||||||||||||| ||||| | || ||||||||||||| |  ||||||||||||| ||||    
T  49426193 ggggccaaaactgccacaaatgcaaaacttaaggaacagttttgtagtttttt-cttagagggctaaaatcgcaactttggaaaagttagggggctaaaa 49426291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 513 - 572
Target Start/End: Complemental strand, 51250535 - 51250476
Alignment:
Q  513 gccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttatttaa 572  Q
    |||||||||||||||| |  ||||||||||||| ||||||| |||||||||||| |||||    
T  51250535 gccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagcctttttttaa 51250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 32295153 - 32295267
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||| ||||  || |||||||||| || ||||||||| ||||||  ||||||| | |||||||||||||| |  ||||||  ||||| ||    
T  32295153 gggggccaaaactgtcacaaatgtaaaacttaggtggtggttttgtaattttttttcttagggggtcaaaatcgcaactttgaaaaagtttaggggctaa 32295252  T
Q  549 aactgctattaagcc 563  Q
    |||| ||||||||||    
T  32295253 aactcctattaagcc 32295267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 566
Target Start/End: Original strand, 8301545 - 8301661
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttt-tccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||| |||||||||||||| ||||||| ||||||| |||||||||||||||| | ||||| | | |||||| | ||||| |  ||| ||| ||||| ||    
T  8301545 gggggtcaaaactgccacagatgcaaaatttaggggacggttttgtagtttttattcttagagggtcaaaattgaaactttggaaaaatta-ggggctaa 8301643  T
Q  549 aactgctattaagccttt 566  Q
    |||||||||||| |||||    
T  8301644 aactgctattaaaccttt 8301661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Complemental strand, 15659094 - 15659041
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  15659094 gggggccaaaactgctccagttgcaaaacttagggggcggttgtgtagtttttt 15659041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 17692886 - 17692939
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttttt 503  Q
    ||||||||||||| | ||| |||||||||||||||| |||||||||||||||||    
T  17692886 gggggccaaaacttctacaattgcaaaacttaggggacggttttgtagtttttt 17692939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Complemental strand, 23220680 - 23220627
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||| ||||||  ||||||||||| |||||||||||||||||||||    
T  23220680 gggggccaaaaccgccacatgtgcaaaacttaaggggcggttttgtagtttttt 23220627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 560
Target Start/End: Complemental strand, 49426103 - 49425998
Alignment:
Q  457 caaaactgccacagttgcaaaacttaggggcgg-ttttgtagtttt-ttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgc 554  Q
    ||||||||| ||| ||||||||||||| ||  | |||||||||||| || |||||| |||||||||||||| || |  ||||||||||  |||||||| |    
T  49426103 caaaactgctacaattgcaaaacttagaggatgattttgtagttttatttcttaggatgccaaaatcgcaaatttgaaaaagttagggtacgaaaactac 49426004  T
Q  555 tattaa 560  Q
    ||||||    
T  49426003 tattaa 49425998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 448 - 560
Target Start/End: Complemental strand, 7060745 - 7060630
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||| ||||| ||  ||||||||||||||||| ||||||||||||| ||||||   ||||| |   ||||||||||||||  | |||||||  | |    
T  7060745 ttggggggtcaaaattgttacagttgcaaaacttagagggcggttttgtaatttttttttcttagaggatcaaaatcgcaacttcataaaagttaaagag 7060646  T
Q  545 cgaaaactgctattaa 560  Q
    ||||||||||||||||    
T  7060645 cgaaaactgctattaa 7060630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 562
Target Start/End: Complemental strand, 37008274 - 37008218
Alignment:
Q  506 ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagc 562  Q
    |||||| ||||||||||||||||  |||||  |||||||| ||||||||||||||||    
T  37008274 ttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagc 37008218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 503
Target Start/End: Original strand, 50226592 - 50226644
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtttttt 503  Q
    |||||||||||||| |||| |||||||||||| ||||||||| ||||||||||    
T  50226592 ggggccaaaactgctacaggtgcaaaacttagagggcggtttagtagtttttt 50226644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 567
Target Start/End: Original strand, 11050429 - 11050483
Alignment:
Q  512 tgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttta 567  Q
    ||||||||| ||||||| |||||||||| ||| |||||||||||||||| ||||||    
T  11050429 tgccaaaattgcaacttcgtgaaagtta-gggacgaaaactgctattaaaccttta 11050483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 561
Target Start/End: Original strand, 23891839 - 23891942
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgc 554  Q
    |||||||||||||||  ||| ||| ||| || |||||||||||||||||  |||||| | |||||||| || || |  ||||||||||| | ||||||||    
T  23891839 gccaaaactgccacatatgcgaaagttatggacggttttgtagtttttt--ttaggg-gtcaaaatcgtaattttgaaaaagttaggggactaaaactgc 23891935  T
Q  555 tattaag 561  Q
    |||||||    
T  23891936 tattaag 23891942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 566
Target Start/End: Original strand, 30849432 - 30849546
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttcc-ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||  ||||| ||||||||||||||| |||||||||||||||||   |||  || |||||||||||||||    ||| ||||| | | ||||    
T  30849432 gggccaaaactatcacagatgcaaaacttaggggacggttttgtagttttttttattaaagt-ccaaaatcgcaactttaaaaaaattaggagactaaaa 30849530  T
Q  551 ctgctattaagccttt 566  Q
    ||||||||||||||||    
T  30849531 ctgctattaagccttt 30849546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 525
Target Start/End: Complemental strand, 50401484 - 50401409
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaa 525  Q
    ||||||||||||| ||||  ||||||||||| ||||||||||||||||| | || |||||||  ||||||||||||    
T  50401484 ggggccaaaactgtcacaaatgcaaaacttagggggcggttttgtagttatatttcttaggggaccaaaatcgcaa 50401409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 452 - 494
Target Start/End: Original strand, 44436949 - 44436991
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttg 494  Q
    ||||| |||||||| |||||||||||||||| |||||||||||    
T  44436949 ggggctaaaactgctacagttgcaaaacttaagggcggttttg 44436991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 519
Target Start/End: Original strand, 44672507 - 44672581
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagttttttccttagggtgccaaaa 519  Q
    |||||||||||||||||||| ||||||| |||| ||  |||||| |||| ||||||||| |||||| ||| ||||    
T  44672507 ccttggggggccaaaactgctacagttgaaaaatttgtggggcgattttatagtttttttcttaggctgcaaaaa 44672581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 566
Target Start/End: Complemental strand, 32295008 - 32294979
Alignment:
Q  537 ttagggggcgaaaactgctattaagccttt 566  Q
    ||||||||||||||||||||||||||||||    
T  32295008 ttagggggcgaaaactgctattaagccttt 32294979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 503
Target Start/End: Complemental strand, 46505286 - 46505233
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtttttt 503  Q
    |||||||||||  |||||||||||||||||||| || || ||||||||||||||    
T  46505286 gggggccaaaaaagccacagttgcaaaacttagtggacgattttgtagtttttt 46505233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 560
Target Start/End: Complemental strand, 46880786 - 46880741
Alignment:
Q  515 caaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 560  Q
    |||||||||||||| || ||| |||||| |||||||||||||||||    
T  46880786 caaaatcgcaacttcgtaaaaattagggagcgaaaactgctattaa 46880741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 6e-39; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 447 - 560
Target Start/End: Original strand, 6510196 - 6510310
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||  |||||||||| ||||    
T  6510196 cttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagcttttttcttagggtgccaaaatcgcaacttcatgaaagttagagggc 6510295  T
Q  546 gaaaactgctattaa 560  Q
    |||||||||||||||    
T  6510296 gaaaactgctattaa 6510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 14489412 - 14489525
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||    
T  14489412 gggggccaaaactgccacagttgcaaaacttagggggtgattttgtagtttttttcttaggg-gccaaaatcgcaacttcgtgaaagttagggggcgaaa 14489510  T
Q  550 actgctattaagcct 564  Q
    |||||||||||||||    
T  14489511 actgctattaagcct 14489525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 447 - 565
Target Start/End: Original strand, 37431734 - 37431853
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||| ||| ||||||||||||    
T  37431734 cttggggggccaaaaatgctacagttgcaaaacttaaggggcggttttgtagtttttttcttaggaggccaaaatcgcaacttcgtggaagttagggggc 37431833  T
Q  546 gaaaactgctattaagcctt 565  Q
    ||||||||||||||| ||||    
T  37431834 gaaaactgctattaaacctt 37431853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 448 - 563
Target Start/End: Original strand, 34679290 - 34679404
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||| ||||||||| |||||| ||||||||||||||||     
T  34679290 ttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttttt--ttagggggccaaaatcacaacttcgtgaaagttagggggca 34679387  T
Q  547 aaaactgctattaagcc 563  Q
    |||||||||||||||||    
T  34679388 aaaactgctattaagcc 34679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 19206259 - 19206141
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||  |||||| |||||||||||||||| |||||| ||||||||    
T  19206259 ccttggggggccaaaactgctacagttgtaaaacttagggggtggttttgtagttttttt-ttagggggccaaaatcgcaactttgtgaaaattaggggg 19206161  T
Q  545 cgaaaactgctattaagcct 564  Q
    |||||| |||||||||||||    
T  19206160 cgaaaattgctattaagcct 19206141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 447 - 563
Target Start/End: Original strand, 15023035 - 15023152
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||| ||| |||||| ||||||||||||| ||||||||||||||||| ||||||| | ||||||| ||||||  |||||||||||||||    
T  15023035 cttggggggccaaaattgctacagttacaaaacttaggggacggttttgtagtttttttcttagggggtcaaaatcacaacttcttgaaagttagggggc 15023134  T
Q  546 gaaaactgctattaagcc 563  Q
     |||||||||||||||||    
T  15023135 caaaactgctattaagcc 15023152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 454 - 566
Target Start/End: Complemental strand, 43028904 - 43028791
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||| |||||||||||||||| |   |||||||||||| ||||||    
T  43028904 ggccaaaactgccacagatgcaaaacttagggggggttttgtagttttttttcttagggggccaaaatcgcaactttggagaagttagggggctaaaact 43028805  T
Q  553 gctattaagccttt 566  Q
    ||||||||||||||    
T  43028804 gctattaagccttt 43028791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 452 - 561
Target Start/End: Original strand, 4925648 - 4925755
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||  |||||  |||||||||||||||| |||||||||||||| | ||||     
T  4925648 ggggccaaaactgctacagttgcaaaacttaggggcgattttgtagtttttt--ttaggaggccaaaatcgcaacttcgtgaaagttaggggacaaaaat 4925745  T
Q  552 tgctattaag 561  Q
    | ||||||||    
T  4925746 tactattaag 4925755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 5470537 - 5470650
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||| || |||||||| |||||||||||||||||||||  |||||| ||||||||||||||||   |||||||||||||| |||    
T  5470537 gggggccaaaactgccacagatgtaaaacttaaggggcggttttgtagttttttt-ttagggggccaaaatcgcaactttaggaaagttagggggctaaa 5470635  T
Q  550 actgctattaagcct 564  Q
    |||||||| ||||||    
T  5470636 actgctataaagcct 5470650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 457 - 570
Target Start/End: Complemental strand, 14489321 - 14489207
Alignment:
Q  457 caaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgct 555  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||| |||| || ||||||||| ||||||   ||||||||| |||| |||||||||    
T  14489321 caaaactgccacaggtgcaaaacttagggggcggttttgtaatttttttcttaaggggccaaaatcacaacttttggaaagttagagggctaaaactgct 14489222  T
Q  556 attaagcctttattt 570  Q
    |||||||||||||||    
T  14489221 attaagcctttattt 14489207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 446 - 563
Target Start/End: Complemental strand, 15022956 - 15022838
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||| |||| ||| || |||||||||| ||||||    ||||||||||||    
T  15022956 ccttggggggccaaaactgccacaaatgcaaaatttaggggcggttttgtagttttttttcttcggatgccaaaatcacaactttcgaaaagttaggggg 15022857  T
Q  545 cgaaaactgctattaagcc 563  Q
    | |||||||||||||||||    
T  15022856 ctaaaactgctattaagcc 15022838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 454 - 565
Target Start/End: Complemental strand, 34679208 - 34679095
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg--cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    ||||||||||||||||  |||||||||||||||  |||||||||| |||||| ||||||  |||||||||||||||| |  ||||||||||||| |||||    
T  34679208 ggccaaaactgccacatgtgcaaaacttaggggggcggttttgtaatttttttcttaggtggccaaaatcgcaactttggaaaagttagggggctaaaac 34679109  T
Q  552 tgctattaagcctt 565  Q
    ||||||||||||||    
T  34679108 tgctattaagcctt 34679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 452 - 565
Target Start/End: Original strand, 35718857 - 35718971
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||    ||| |||||||||| |||||||||||| |||| |||    
T  35718857 ggggccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttttcttaggagatcaagatcgcaacttcgtgaaagttaggaggcggaaa 35718956  T
Q  551 ctgctattaagcctt 565  Q
    |||||||||| ||||    
T  35718957 ctgctattaaacctt 35718971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 16043222 - 16043339
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttt----tccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||||||| |||||||| |||||| ||||| ||||||||||    | ||||||| |||||||||| ||||| ||||||||||||||||    
T  16043222 gggggccaaaactgccacagatgcaaaacatagggggcggttctgtagtttttcttcttcttagggggccaaaatcgtaacttcgtgaaagttagggggc 16043321  T
Q  546 gaaaactgctattaagcc 563  Q
    |||||||||| |||||||    
T  16043322 gaaaactgctgttaagcc 16043339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 6592934 - 6593047
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||||||||||  | |||| || ||||||||||||| |||||||||||| |||||||    
T  6592934 gggggccaaaactgctacagttgcaaaacttagggggcagttttgtagttttttt-taagggggctaaaatcgcaacttcgtgaaagttaggtggcgaaa 6593032  T
Q  550 actgctattaagcct 564  Q
    ||| || ||||||||    
T  6593033 actactgttaagcct 6593047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 452 - 560
Target Start/End: Original strand, 34761061 - 34761171
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||||||| |||| |||| || |  ||||||||||||| |||||||||||||| |||||    
T  34761061 ggggccaaaactgctacaattgcaaaacttaggtggcggttttgtagttctttttcttaaggagttaaaatcgcaacttcgtgaaagttaggggacgaaa 34761160  T
Q  550 actgctattaa 560  Q
    |||||||||||    
T  34761161 actgctattaa 34761171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 43028989 - 43029109
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||| |||||||||||||| ||| ||| |||||||||||| |||||||||||||||||  ||||||| |||||||||||||||| ||||||||||  ||    
T  43028989 ccttgtggggccaaaactgctacaattgtaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaaagtta-agg 43029087  T
Q  544 gcgaaaactgctattaagcctt 565  Q
    || |||||||||||||| ||||    
T  43029088 gcaaaaactgctattaaacctt 43029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 451 - 566
Target Start/End: Original strand, 14943745 - 14943860
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||| |  |||||||| |||||| |  ||||||| ||||| |||    
T  14943745 gggggccaaaaatgccacaggtgcaaaacttagagggcggttttgtagtttttttcttagaga-ccaaaatcacaactttggaaaagttaaggggctaaa 14943843  T
Q  550 actgctattaagccttt 566  Q
    |||||||||||||||||    
T  14943844 actgctattaagccttt 14943860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 453 - 563
Target Start/End: Complemental strand, 18709356 - 18709247
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    ||||||||||||| | ||||||||||||||||||  | ||||||||||||||  |||||  |||||||||| ||||| |||||||||||||| |||||||    
T  18709356 gggccaaaactgctatagttgcaaaacttagggggtgattttgtagtttttt--ttaggaggccaaaatcgaaacttcgtgaaagttaggggacgaaaac 18709259  T
Q  552 tgctattaagcc 563  Q
    ||||||||||||    
T  18709258 tgctattaagcc 18709247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 451 - 570
Target Start/End: Original strand, 44617939 - 44618058
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| ||||||| | ||||  |||||||||||||||  |||||||||| |||  |||    
T  44617939 gggggccaaaactgccacaaatgcaaaacttagggggcggttttgtaattttttcttaaggga-ccaaaatcgcaacttcttgaaagttagagggttaaa 44618037  T
Q  550 actgctattaagcctttattt 570  Q
    |||||||||||||||| ||||    
T  44618038 actgctattaagccttgattt 44618058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 451 - 565
Target Start/End: Complemental strand, 25499 - 25378
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttcctt------agggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||      |||| |||||||||| ||||| | ||||||||||||    
T  25499 gggggtcaaaactgccacaggtgcaaaacttagggggcggttttgtagtttttttcttcttcttagggggccaaaatcgtaactttgggaaagttagggg 25400  T
Q  544 gcgaaaactgctattaagcctt 565  Q
    || ||||||| |||||||||||    
T  25399 gcaaaaactgttattaagcctt 25378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 447 - 550
Target Start/End: Complemental strand, 14943653 - 14943549
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttagggg--cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||| ||| ||||| ||| ||||||||||||||||||||  |||||||||||||||||| |||||||| ||||||| |||||| |||||||||||||||    
T  14943653 cttggtgggtcaaaattgctacagttgcaaaacttaggggtgcggttttgtagttttttc-ttagggtgtcaaaatcacaacttcgtgaaagttaggggg 14943555  T
Q  545 cgaaaa 550  Q
    | ||||    
T  14943554 caaaaa 14943549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 32969725 - 32969842
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgta-gttttttcctt--agggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||| |||||||  ||  |||| || ||||||| ||||  |||||||||||||||||    
T  32969725 gggggccaaaactgctactgttgcaaaacttagggggcggttttgtaagtttttttttttcagggggctaaaatcgaaactccgtgaaagttagggggcg 32969824  T
Q  547 aaaactgctattaagcct 564  Q
    ||||||||||||||||||    
T  32969825 aaaactgctattaagcct 32969842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 451 - 563
Target Start/End: Complemental strand, 39918548 - 39918434
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||| ||||||  |||||||||||| ||||| ||||| ||||||||  ||||||| |||||||||||||||| | |||||||||||||| ||    
T  39918548 gggggccaaaacagccacatatgcaaaacttagcgggcgattttgcagttttttttcttagggggccaaaatcgcaactttgagaaagttagggggctaa 39918449  T
Q  549 aactgctattaagcc 563  Q
    |||| ||||||||||    
T  39918448 aactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 31827733 - 31827845
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| ||||||||||||||||||||  | ||||||| ||||||| |||||  | || ||||||||||| || |||||||||||||||||    
T  31827733 gggggccaaaactgctacagttgcaaaacttagggggtgattttgtatttttttc-ttaggaggtcataatcgcaacttcgtaaaagttagggggcgaaa 31827831  T
Q  550 actgctattaagcc 563  Q
    | ||||||||||||    
T  31827832 attgctattaagcc 31827845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 446 - 567
Target Start/End: Original strand, 25333690 - 25333810
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||| ||||||||||||| ||||| | |||||||| | |||||||||||||||||||  |||||| | ||||||||||| || || |||||||| |||    
T  25333690 ccttggagggccaaaactgctacagtggtaaaacttatgaggcggttttgtagtttttt--ttagggggtcaaaatcgcaatttcgttaaagttagaggg 25333787  T
Q  545 cgaaaactgctattaagccttta 567  Q
    ||||||||  |||||||||||||    
T  25333788 cgaaaactattattaagccttta 25333810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 454 - 563
Target Start/End: Complemental strand, 36177089 - 36176981
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||||||| ||  ||||||||||||||  ||||||||||||||||  |||||| || ||||||||||||| |||||| |||| |||| ||||||    
T  36177089 ggccaaaactgccataggggcaaaacttagggggtggttttgtagtttttt--ttagggggctaaaatcgcaacttcgtgaaacttagagggctaaaact 36176992  T
Q  553 gctattaagcc 563  Q
    |||||||||||    
T  36176991 gctattaagcc 36176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 563
Target Start/End: Original strand, 37803337 - 37803446
Alignment:
Q  457 caaaactgccacagttgcaaaacttaggggcggttttgtagttttttc---cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||    ||||||  | |||||||||||||| || |||||||||||||||||| ||    
T  37803337 caaaactgctacagttgcaaaacttatgggcggtttcgtagttttttttttcttaggaggtcaaaatcgcaacttcgtaaaagttagggggcgaaaattg 37803436  T
Q  554 ctattaagcc 563  Q
     |||||||||    
T  37803437 ttattaagcc 37803446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 27489631 - 27489756
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    |||||||||| ||||||||| ||||||||||||||||||| || |||||||||  |||||| ||||||  |||||||||||||||| ||||||| ||||     
T  27489631 ccttggggggtcaaaactgctacagttgcaaaacttagggagcagttttgtagtttttttttcttaggaggccaaaatcgcaacttcgtgaaagatagga 27489730  T
Q  543 ggc----gaaaactgctattaagcct 564  Q
    | |    |||||||||||||||||||    
T  27489731 gacgaaagaaaactgctattaagcct 27489756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 451 - 569
Target Start/End: Complemental strand, 4576657 - 4576537
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||||||||||||| |||||||||||||||| ||| || ||||||||||||||  ||||||| ||||||||  |||||| |  ||||||||| ||| ||    
T  4576657 gggggccaaaactgctacagttgcaaaacttatgggacgattttgtagttttttttcttagggggccaaaatgacaactttgaaaaagttaggaggctaa 4576558  T
Q  549 aactgctattaagcctttatt 569  Q
    |||||||||||| | ||||||    
T  4576557 aactgctattaaacatttatt 4576537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 450 - 564
Target Start/End: Complemental strand, 44297676 - 44297562
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||  |||||| ||||||||||||||||    ||| ||||| ||| ||    
T  44297676 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtagtttttt-tttagggggccaaaatcgcaacttttgaaaaattaggaggctaa 44297578  T
Q  549 aactgctattaagcct 564  Q
    || |||||||||||||    
T  44297577 aagtgctattaagcct 44297562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 448 - 564
Target Start/End: Complemental strand, 5362292 - 5362174
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||| |||||||||| |||  || || |||||| | | ||||||||||||||||  |||| || |||||||||||||||| ||||||||||||||||    
T  5362292 ttgggggaccaaaactgcgacaactgtaacacttagagagaggttttgtagttttttttcttatggggccaaaatcgcaactttgtgaaagttagggggc 5362193  T
Q  546 gaaaactgctattaagcct 564  Q
    ||||| | |||||||||||    
T  5362192 gaaaattactattaagcct 5362174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 21358328 - 21358421
Alignment:
Q  475 aaaacttagg-ggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctt 565  Q
    |||||||||| ||||||||| |||||||||   ||||||| ||||||||| |||||| | |||||||||||||| |||||||||||||||||||    
T  21358328 aaaacttaggaggcggttttatagtttttttttcttagggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaagcctt 21358421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 12949000 - 12948892
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||||||||||   | |||| ||||||||| |||| |||||||||  |||||||| ||||||||||||||  | ||| ||||||||| ||||    
T  12949000 gggggccaaaactgccacatgggaaaaatttaggggcgattttatagttttttt-ttagggtgtcaaaatcgcaacttcttaaaatttagggggctaaaa 12948902  T
Q  551 ctgctattaa 560  Q
    ||||||||||    
T  12948901 ctgctattaa 12948892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 5470441 - 5470333
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| ||| |||||||||||| ||||| |||||||||||||||  |||| |    ||||||||||||| |||||| | ||||| |||||    
T  5470441 gggggccaaaactgctacaattgcaaaacttagggggcagttttgtagtttttt--ttagaggataaaaatcgcaacttcgtgaaaataaggggacgaaa 5470344  T
Q  550 actgctattaa 560  Q
    |||||||||||    
T  5470343 actgctattaa 5470333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 454 - 564
Target Start/End: Original strand, 24472650 - 24472759
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||||| ||||||| || |||||| |||||| |  ||| ||||||  | ||||||    
T  24472650 ggccaaaactgccacagatgcaaaacttagggg-ggttttgtagttttttttcttaggg-gctaaaatcacaactttggaaaaattagggttctaaaact 24472747  T
Q  553 gctattaagcct 564  Q
    ||||||||||||    
T  24472748 gctattaagcct 24472759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 483 - 564
Target Start/End: Original strand, 14816030 - 14816112
Alignment:
Q  483 ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||||||| |||  |||||| ||||||||||||||||  |||||  |||||||| ||||||||||||||||||    
T  14816030 ggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcct 14816112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 455 - 564
Target Start/End: Complemental strand, 20650479 - 20650369
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    ||||||||||||||||  | |||| || ||| ||||||||||| || ||| ||||||| ||||||||| ||||||  ||||| ||||||||| |||||||    
T  20650479 gccaaaactgccacaggggaaaaattttgggtgcggttttgtaattattttcttagggggccaaaatctcaacttcttgaaacttagggggctaaaactg 20650380  T
Q  554 ctattaagcct 564  Q
    |||| ||||||    
T  20650379 ctatgaagcct 20650369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 456 - 569
Target Start/End: Complemental strand, 25333607 - 25333493
Alignment:
Q  456 ccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgc 554  Q
    ||||||||||||||| |||||||||||||||  |||||| ||||||||| |||| ||  ||||||||||||||| |  ||||||| ||||  |||| ||     
T  25333607 ccaaaactgccacaggtgcaaaacttagggggtggttttatagtttttttcttaagggaccaaaatcgcaactttggaaaagttaaggggttaaaattgt 25333508  T
Q  555 tattaagcctttatt 569  Q
    |||||||||| ||||    
T  25333507 tattaagcctatatt 25333493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 448 - 564
Target Start/End: Complemental strand, 31827642 - 31827524
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagt-tttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||||| ||||| |||||| |||| |||| | ||||||||| ||||| ||||||| | ||||||| |||||| |  |||||||||| |     
T  31827642 ttggggggccaaaactggcacagatgcaaagcttagggggtgattttgtagtcttttttcttaggggggcaaaatcacaactttggaaaagttagggagt 31827543  T
Q  546 gaaaactgctattaagcct 564  Q
     ||||||||||||||||||    
T  31827542 taaaactgctattaagcct 31827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 39918637 - 39918695
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  39918637 ccttggggggccaaaattgctacagttgcaaaacttagggggcggttttgtagtttttt 39918695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 534
Target Start/End: Complemental strand, 35718756 - 35718676
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaa 534  Q
    ||||||||||||||||| |||||||  |||||| ||||||||||||||||| ||||||| ||||||||| |||||| |||||    
T  35718756 ggccaaaactgccacagatgcaaaatgtaggggacggttttgtagtttttttcttaggg-gccaaaatcacaacttcgtgaa 35718676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 453 - 570
Target Start/End: Complemental strand, 6592838 - 6592717
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttaggggcggttttgtagttt----tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||  |||||||||||||||| ||||||||        | | ||||||| | |||||||||||||| |  ||||||||||||| ||    
T  6592838 gggccaaaactgccacatatgcaaaacttaggggcagttttgtaaaaaaaaatcttcttagggggtcaaaatcgcaactttggaaaagttagggggctaa 6592739  T
Q  549 aactgctattaagcctttattt 570  Q
    |||||||||||||||| |||||    
T  6592738 aactgctattaagcctatattt 6592717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 565
Target Start/End: Complemental strand, 21361990 - 21361879
Alignment:
Q  455 gccaaaactgccacagttgcaaaactta-ggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||||||||  ||||||||||| |||| | |||||||| |||||| |||| || |||||||||||||||| |  ||||||| ||||| |||| |    
T  21361990 gccaaaactgccacatgtgcaaaacttagggggtgtttttgtagttttttttcttaaggggccaaaatcgcaactttgataaagtta-ggggcaaaaatt 21361892  T
Q  553 gctattaagcctt 565  Q
    |||||||||||||    
T  21361891 gctattaagcctt 21361879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 25375109 - 25375188
Alignment:
Q  484 gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||| |||||||||||||||| |||||| |||||||||||||| | |  ||| ||||||||| ||||||||||||||||||    
T  25375109 gggcagttttgtagttttttc-ttagggggccaaaatcgcaacattgaaaaaattagggggctaaaactgctattaagcct 25375188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 447 - 552
Target Start/End: Original strand, 18224929 - 18225033
Alignment:
Q  447 cttggggggccaaaac-tgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||| ||| ||| |||||||||||| | |||| ||||||||||||||| |||||| | |||||||||||||| || |||||| |||||    
T  18224929 cttggggggccaaaacctgctacaattgcaaaacttaagaggcgattttgtagttttttc-ttaggg-gtcaaaatcgcaacttcgtaaaagtt-ggggg 18225025  T
Q  545 cgaaaact 552  Q
    ||||||||    
T  18225026 cgaaaact 18225033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 456 - 563
Target Start/End: Complemental strand, 19895723 - 19895613
Alignment:
Q  456 ccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||| | |||||||||||||| || ||| |||| |||||||||   |||||||  |||||||||||| || || ||||||||||| ||||||||    
T  19895723 ccaaaactgctatagttgcaaaacttatggtgcgattttatagtttttttttcttaggggaccaaaatcgcaatttcgtaaaagttaggggacgaaaact 19895624  T
Q  553 gctattaagcc 563  Q
    | |||||||||    
T  19895623 gatattaagcc 19895613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 451 - 528
Target Start/End: Original strand, 2609289 - 2609367
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    ||||| |||||||||||||  || |||||||| |||||| |||||||||||||| |||||||  |||||||||||||||    
T  2609289 gggggtcaaaactgccacatatgtaaaacttatggggcgattttgtagtttttttcttaggggaccaaaatcgcaactt 2609367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 503
Target Start/End: Complemental strand, 34760961 - 34760908
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  34760961 gggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttt 34760908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 568
Target Start/End: Complemental strand, 19399302 - 19399177
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttagggg----cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    |||||| |||||||||||  | ||||| ||||||||||||    | ||||| |||||| ||  ||||||  ||||||||||||||| | ||||||||||     
T  19399302 cttgggtggccaaaactgttatagttgaaaaacttagggggcagctgttttatagtttcttttttaggggaccaaaatcgcaactttgagaaagttagga 19399203  T
Q  543 ggcgaaaactgctattaagcctttat 568  Q
    ||| |||| ||||||||||| |||||    
T  19399202 ggctaaaattgctattaagcatttat 19399177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 570
Target Start/End: Complemental strand, 24306132 - 24306009
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||| | ||||||||  |||||||||||||||||  | ||||||||||||||||| ||||| |  | ||||||||||||| || ||||||| ||       
T  24306132 cttggggaggcaaaactgttacagttgcaaaacttagaagacggttttgtagtttttttcttagaggactaaaatcgcaacttcgtaaaagtta-ggaaa 24306034  T
Q  546 gaaaactgctattaagcctttattt 570  Q
     ||||||| ||||||||||||||||    
T  24306033 aaaaactgttattaagcctttattt 24306009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 454 - 564
Target Start/End: Original strand, 12949221 - 12949332
Alignment:
Q  454 ggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||||||| ||  |||||||||| ||||| ||||||||||||||| ||||| | ||||| || |||||||  | ||| ||| |||   ||||||    
T  12949221 ggccaaaactgccatagaggcaaaacttatggggcagttttgtagtttttttcttagtgggccaacattgcaacttctttaaacttaagggattaaaact 12949320  T
Q  553 gctattaagcct 564  Q
    ||||||||||||    
T  12949321 gctattaagcct 12949332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 18969209 - 18969099
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||| ||||||||| ||| |||||||||||||  || |||||||||||||||  ||||||   |||||||||||||| || ||||| |||  ||| |||    
T  18969209 gggggtcaaaactgctacaattgcaaaacttagaagcagttttgtagtttttt--ttagggcatcaaaatcgcaacttcgtaaaagtgaggatgcg-aaa 18969113  T
Q  551 ctgctattaagcct 564  Q
    ||| ||||||||||    
T  18969112 ctgatattaagcct 18969099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 454 - 564
Target Start/End: Original strand, 19399377 - 19399490
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||| ||| || || |||||||||||  || |||||||||||||||||   |||| ||  |||||||| |||||| |  ||||||||||||| ||||    
T  19399377 ggccaaagctgacataggtgcaaaacttaatggacggttttgtagttttttttacttaagggaccaaaatcacaactttgaaaaagttagggggctaaaa 19399476  T
Q  551 ctgctattaagcct 564  Q
    ||||||||||||||    
T  19399477 ctgctattaagcct 19399490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 25411648 - 25411594
Alignment:
Q  458 aaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttaggg 511  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||    
T  25411648 aaaactgccacagatgcaaaacttagggggcggttttgtactttttttcttaggg 25411594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 36195708 - 36195651
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttttt 503  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  36195708 ccttagggggccaaaactgctacagttgcaaa-cttagggggcggttttgtagtttttt 36195651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 511
Target Start/End: Complemental strand, 37431657 - 37431595
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtag-ttttttccttaggg 511  Q
    |||||||||||||||||||  |||||||||||| ||||| |||||||| ||||||||||||||    
T  37431657 gggggccaaaactgccacaaatgcaaaacttagtgggcgattttgtagtttttttccttaggg 37431595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 563
Target Start/End: Complemental strand, 37803236 - 37803118
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtag--ttttttccttagggtgc----caaaatcgcaacttagtgaaagttaggggg 544  Q
    |||| |||||||||||||  ||||||||||||| |||||||||||||  |||||| |||| || ||     ||||||||||||| | |||||||||| |     
T  37803236 ggggtcaaaactgccacaaatgcaaaacttaggaggcggttttgtagtttttttttcttaaggggctaattaaaatcgcaactttgagaaagttaggaga 37803137  T
Q  545 cgaaaactgctattaagcc 563  Q
    | |||||||||||||||||    
T  37803136 ctaaaactgctattaagcc 37803118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 563
Target Start/End: Original strand, 4576783 - 4576854
Alignment:
Q  490 ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    ||||||||||||||  | |||| |||||||||||||||| | |||||||||||| | |||||||||||||||||    
T  4576783 ttttgtagttttttattaaggg-gccaaaatcgcaactttg-gaaagttaggggtctaaaactgctattaagcc 4576854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Complemental strand, 8857160 - 8857107
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagtttttt 503  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||| ||||||    
T  8857160 gggggccaaaactgccacaaatgcaaaacttaggaggcggttttgtactttttt 8857107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 550
Target Start/End: Complemental strand, 27489543 - 27489447
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||||||| ||||||| |||||||    |||||||||||||| ||||||| || |||||||||||||   |||||||||| ||| ||||    
T  27489543 ggccaaaactgccacagatgcaaaagttagggggtaattttgtagtttttttcttaggg-gcaaaaatcgcaactttaagaaagttaggaggctaaaa 27489447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Complemental strand, 34100854 - 34100801
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttttt 503  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  34100854 gggggtcaaaactgctacagttgcaaaacttaggggacggttttatagtttttt 34100801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 503
Target Start/End: Complemental strand, 4925552 - 4925500
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttttt 503  Q
    |||| |||||||||||||  ||||||||||||||| |||||||||||||||||    
T  4925552 ggggtcaaaactgccacatatgcaaaacttaggggacggttttgtagtttttt 4925500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 566
Target Start/End: Original strand, 36177329 - 36177407
Alignment:
Q  489 gttttgtagtt--ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttt 566  Q
    |||||||||||  |||| ||||||| ||||||||||||||||  ||||| ||| ||||| ||||||| ||||||||||||    
T  36177329 gttttgtagttattttttcttaggg-gccaaaatcgcaacttcttgaaacttaaggggctaaaactgttattaagccttt 36177407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 35500291 - 35500406
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||||||||||||| | ||  |||| ||||| |||||||||||||| ||| |||  |||||| ||||||||||||||||  |||||  |||||  | ||    
T  35500291 gggggccaaaactgcaaaaggggcaatacttaaggggcggttttgtattttattttgttagggggccaaaatcgcaacttcttgaaacatagggccccaa 35500390  T
Q  549 aactgctattaagcct 564  Q
    |||| |||||||||||    
T  35500391 aactactattaagcct 35500406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 563
Target Start/End: Complemental strand, 14815779 - 14815698
Alignment:
Q  483 ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    |||||||||||||||||| |||  ||| ||  |||||| ||||||||  |||||  |||||||| |||||||||||||||||    
T  14815779 ggggcggttttgtagtttatttagttaagggaccaaaaccgcaacttcttgaaacatagggggccaaaactgctattaagcc 14815698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 511
Target Start/End: Complemental strand, 32969667 - 32969610
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttaggg 511  Q
    |||||||||||||||  || |||||||||||| || |||||||||||||| |||||||    
T  32969667 gccaaaactgccacaaatgaaaaacttagggggcgattttgtagtttttttcttaggg 32969610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 1e-37; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 35383880 - 35383763
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||||  |||||| ||||||||| |||||| ||||||||||||||||    
T  35383880 ccttggggggccaaaagtgctacagtggcaaaacttaggggcgattttgtagtttttt--ttagggggccaaaatcacaacttcgtgaaagttagggggc 35383783  T
Q  546 gaaaactgctattaagcctt 565  Q
    ||||||||||||||||||||    
T  35383782 gaaaactgctattaagcctt 35383763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 451 - 566
Target Start/End: Complemental strand, 23759674 - 23759558
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||| | |||||||||||| ||||||| ||||||||||||||||| |||| || ||||||||||||||||  |||||||||||||||||||    
T  23759674 gggggccaaaactactacagttgcaaaatttaggggacggttttgtagtttttttcttaaggggccaaaatcgcaactttatgaaagttagggggcgaaa 23759575  T
Q  550 actgctattaagccttt 566  Q
    ||| |||||||||||||    
T  23759574 actactattaagccttt 23759558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 446 - 561
Target Start/End: Original strand, 49185754 - 49185870
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||  ||||||| |||||||||||||||| ||||||||| ||||    
T  49185754 ccttggggggccaaaactacaacagttgcaaaacttaaggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaaagtt-gggg 49185852  T
Q  544 gcgaaaactgctattaag 561  Q
    | ||||||||||||||||    
T  49185853 gtgaaaactgctattaag 49185870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 35393864 - 35393984
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||||| |||||| |||||| |||||| |||||||||||||||||  ||||| |  ||||||||||||||| ||||||||||||||    
T  35393864 ccttggggggccaaaactgctacagttacaaaacctagggggcggttttgtagttttttttcttagaggtccaaaatcgcaacttcgtgaaagttagggg 35393963  T
Q  544 gcgaaaactgctattaagcct 564  Q
    | |||||||||||||||||||    
T  35393964 gtgaaaactgctattaagcct 35393984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 1571603 - 1571721
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||| |||||||||||||||||||||||||||||||| ||| | |||||||||||||| |||| |  |||||||||||||||| ||||||||||||  |     
T  1571603 ccttagggggccaaaactgccacagttgcaaaacttatgggtgattttgtagtttttttcttatgaggccaaaatcgcaacttcgtgaaagttaggacgt 1571702  T
Q  546 gaaaactgctattaagcct 564  Q
    |||||||| ||||||||||    
T  1571703 gaaaactgttattaagcct 1571721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 451 - 568
Target Start/End: Original strand, 50769563 - 50769680
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| |||||||||||||||||  ||||||||| |||||||||  |||||| |||||||||||||||| || |||||||||||||||||    
T  50769563 gggggccaaaactgctacagttgcaaaacttagtaggcggttttatagttttttt-ttagggggccaaaatcgcaacttcgtaaaagttagggggcgaaa 50769661  T
Q  550 actgctattaagcctttat 568  Q
    |||||| ||||||| ||||    
T  50769662 actgcttttaagcccttat 50769680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 53924860 - 53924746
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| |||||| |||| || | ||||||| |||||| |||||||||||||||||| |    
T  53924860 gggggccaaaactgctacagttgcaaaacttaggggacggttttgtaatttttttcttaaggggtcaaaatcacaacttcgtgaaagttagggggcgaga 53924761  T
Q  550 actgctattaagcct 564  Q
    ||| |||||||||||    
T  53924760 actactattaagcct 53924746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 564
Target Start/End: Complemental strand, 6614958 - 6614846
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||||||||| ||| || |||||||||||||||| |||||||||| ||| ||||||    
T  6614958 ggggccaaaactgctacagttgcaaaacttaggggatggttttgtagttttttc-ttaaggagccaaaatcgcaacttcgtgaaagttaagggtcgaaaa 6614860  T
Q  551 ctgctattaagcct 564  Q
     |||||||||||||    
T  6614859 atgctattaagcct 6614846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 450 - 566
Target Start/End: Original strand, 53312486 - 53312602
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||| |||||| || | ||||| ||| ||||||||||||||| ||||| | | |||||||||||||| ||||||||||||||| ||||    
T  53312486 ggggggccaaaactgctacagttacagagcttagaggcagttttgtagtttttttcttagtgggtcaaaatcgcaacttcgtgaaagttagggggtgaaa 53312585  T
Q  550 actgctattaagccttt 566  Q
    |||| ||||||||||||    
T  53312586 actgttattaagccttt 53312602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 44356598 - 44356711
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| |||||| ||||||  |||||||||||||||| | |||||||| ||||| |||    
T  44356598 gggggccaaaactgccacatatgcaaaacttagggggcggttttgtaatttttttcttaggcggccaaaatcgcaactttgagaaagtta-ggggctaaa 44356696  T
Q  550 actgctattaagcct 564  Q
    |||||||||||||||    
T  44356697 actgctattaagcct 44356711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 448 - 563
Target Start/End: Complemental strand, 2654071 - 2653953
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagtttttt--ccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||| |||||||||||||||||| |  ||||||||||||||||  | | |||| |||||||||||||||| || ||||||||| ||    
T  2654071 ttggggggccaaaactgctacagttgcaaaacttaggagatggttttgtagttttttatcttaagggggccaaaatcgcaacttcgtaaaagttaggagg 2653972  T
Q  545 cgaaaactgctattaagcc 563  Q
    | |||||||||||||||||    
T  2653971 caaaaactgctattaagcc 2653953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 560
Target Start/End: Complemental strand, 50769476 - 50769366
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtt--ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| |||||||||| || ||||||||||||||||||||||||||||  |||| ||||||| | |||||||||||||| | |||||||||||||  |||    
T  50769476 ggggctaaaactgccatagatgcaaaacttaggggcggttttgtagtttttttttcttaggggggcaaaatcgcaactttgggaaagttagggggataaa 50769377  T
Q  550 actgctattaa 560  Q
    |||||||||||    
T  50769376 actgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 448 - 560
Target Start/End: Complemental strand, 14449390 - 14449276
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||||  | ||||||||||||||  || | ||||||||||| |||| ||||||| ||||||||| |||||| ||||||||||||||||    
T  14449390 ttggggggccaaaactggtatagttgcaaaacttaaaggacagttttgtagttgtttttcttagggggccaaaatctcaacttcgtgaaagttagggggc 14449291  T
Q  546 gaaaactgctattaa 560  Q
    |||||||||||||||    
T  14449290 gaaaactgctattaa 14449276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 561
Target Start/End: Complemental strand, 1420645 - 1420537
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    |||||||||||  | |||||||||||||||||| |||||||||||||||||  |||||  |||||||||||||||| |  ||||||||||||| ||||||    
T  1420645 ggccaaaactgatatagttgcaaaacttagggggcggttttgtagttttttttttaggaggccaaaatcgcaactttggaaaagttagggggctaaaact 1420546  T
Q  553 gctattaag 561  Q
    |||||||||    
T  1420545 gctattaag 1420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 456 - 569
Target Start/End: Complemental strand, 11824297 - 11824182
Alignment:
Q  456 ccaaaactgccacagttgcaaaacttaggggcggttttgtagtttt--ttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||  || |||||||  |||||||| ||||||   |||||||||||||  |||||||    
T  11824297 ccaaaactgccacacatgcaaaacttaggggcggttttgtagtttttgtttcttagggaaccaaaatcacaactttaggaaagttagggggttaaaactg 11824198  T
Q  554 ctattaagcctttatt 569  Q
    ||||||||||| ||||    
T  11824197 ctattaagcctatatt 11824182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 566
Target Start/End: Original strand, 12719648 - 12719763
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||   ||||||| ||||||||  |||||| | |||||||||||||  ||||    
T  12719648 ggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatatcaactttgggaaagttagggggttaaaa 12719747  T
Q  551 ctgctattaagccttt 566  Q
    ||||||||||||||||    
T  12719748 ctgctattaagccttt 12719763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 14449484 - 14449599
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagtttt--ttccttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||||||  ||||||| |  |||||||||||||||| |  ||||||||||||| |    
T  14449484 gggggccaaaactgccacaaatgcaaaacttagggagcggttttgtagttttttttccttaagaggccaaaatcgcaactttggaaaagttagggggcta 14449583  T
Q  548 aaactgctattaagcc 563  Q
    ||||| ||||||||||    
T  14449584 aaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 562
Target Start/End: Original strand, 21957662 - 21957780
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    ||||| |||| ||||||||| |||||||||||||||||| |||||||||||||||||||   ||||| | |||||||||||||||| |  ||||||||||    
T  21957662 ccttgtggggtcaaaactgctacagttgcaaaacttaggaggcggttttgtagtttttttttcttagag-gccaaaatcgcaactttggaaaagttaggg 21957760  T
Q  543 ggcgaaaactgctattaagc 562  Q
    ||| ||||||||||||||||    
T  21957761 ggctaaaactgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 4796149 - 4796035
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||||| |||| ||||| | ||||||||||||| || |  ||||||||||| | |||    
T  4796149 gggggccaaaactgctacagttgcaaaacttatgggtggttttgtagttttttttcttagagggccaaaatcgcaattttgaaaaagttaggggactaaa 4796050  T
Q  550 actgctattaagcct 564  Q
    | |||||||||||||    
T  4796049 aatgctattaagcct 4796035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 8965634 - 8965525
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  |||||| || |||||| |||||| || ||||| |||||||||||    
T  8965634 ggggaccaaaactggcacagttgcaaaacttaaggggcggttttgtagttttttt-ttagggggctaaaatcacaacttcgtaaaagtaagggggcgaaa 8965536  T
Q  550 actgctattaa 560  Q
    ||| |||||||    
T  8965535 acttctattaa 8965525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 450 - 559
Target Start/End: Complemental strand, 14060869 - 14060760
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||| | ||||||||| |||||||| |||||||||||||||||| |||||| | |||||||||||||| |  ||||||||||||  ||    
T  14060869 ggggggccaaaactgctatagttgcaaagcttagggggcggttttgtagttttttc-ttagggggtcaaaatcgcaactttgaaaaagttagggggttaa 14060771  T
Q  549 aactgctatta 559  Q
    |||||||||||    
T  14060770 aactgctatta 14060760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 2181325 - 2181438
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||  ||||||||||||||||| |||| ||||||||||| ||| |||| || ||||||||||||||||  | |||||||||| || |||    
T  2181325 gggggccaaaactgttacagttgcaaaacttagagggcagttttgtagttcttttcttaaggagccaaaatcgcaacttcataaaagttagggagcaaaa 2181424  T
Q  550 actgctattaagcc 563  Q
    | ||||||||||||    
T  2181425 agtgctattaagcc 2181438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 29697717 - 29697837
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||| |||| |||||||| | |||||||||||||||||||| ||| |||||||||||||  |||||||  |||||||||||||||  ||||||||||| |    
T  29697717 ccttaggggaccaaaactactacagttgcaaaacttaggggacgggtttgtagttttttttcttaggga-ccaaaatcgcaacttcatgaaagttaggag 29697815  T
Q  544 gcgaaaactgctattaagcctt 565  Q
    | ||||||||||||||||||||    
T  29697816 gtgaaaactgctattaagcctt 29697837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 53312401 - 53312285
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttt--tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||||||||  ||||||| |||||||  |||||||||||||  ||| ||||||| |||||||||||||||| |  ||||||||||||| |    
T  53312401 gggggccaaaactgccacatgtgcaaaatttagggggtggttttgtagtttgtttttcttagggggccaaaatcgcaactttgaaaaagttagggggcta 53312302  T
Q  548 aaactgctattaagcct 564  Q
    ||| |||||||||||||    
T  53312301 aaaatgctattaagcct 53312285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 565
Target Start/End: Complemental strand, 2016905 - 2016789
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagt-tttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||  ||||||||||||||| | |||||||||| ||||| ||| | | |||||||||||||||| |  ||||||||||||| ||    
T  2016905 gggggccaaaactgccacatgtgcaaaacttagggggcagttttgtagtcttttttctttgagggccaaaatcgcaactttggaaaagttagggggctaa 2016806  T
Q  549 aactgctattaagcctt 565  Q
    ||||||||| |||||||    
T  2016805 aactgctatcaagcctt 2016789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 561
Target Start/End: Original strand, 21871587 - 21871696
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||| ||| || ||||||||||||| |||||||||||||||||||  |||||| | |||||||||||||| |  ||||||||||||| |||    
T  21871587 gggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt--ttagggggtcaaaatcgcaactttgaaaaagttagggggctaaa 21871684  T
Q  550 actgctattaag 561  Q
    | ||||||||||    
T  21871685 attgctattaag 21871696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 561
Target Start/End: Original strand, 21927448 - 21927557
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||| ||| || ||||||||||||| |||||||||||||||||||  |||||| | |||||||||||||| |  ||||||||||||| |||    
T  21927448 gggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt--ttagggggtcaaaatcgcaactttgaaaaagttagggggctaaa 21927545  T
Q  550 actgctattaag 561  Q
    | ||||||||||    
T  21927546 attgctattaag 21927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 454 - 565
Target Start/End: Original strand, 23759777 - 23759889
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||| ||||| | ||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||  ||||||||| ||||  |||| |    
T  23759777 ggccaaaactgtcacagatacaaaacttaggggacggttttgtagtttttttcttaggggaccaaaatcgcaactttatgaaagttaaggggttaaaatt 23759876  T
Q  553 gctattaagcctt 565  Q
    | |||||||||||    
T  23759877 gttattaagcctt 23759889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 567
Target Start/End: Complemental strand, 51362653 - 51362532
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc----cttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||||||     ||||||| ||||||||||||||||    |||||||||||||    
T  51362653 gggggccaaaactgccacatatgcaaaacttagggggcggttttgtagttttttttcttcttagggggccaaaatcgcaactttagaaaagttagggggc 51362554  T
Q  546 gaaaactgctattaagccttta 567  Q
     |||||| ||||||| ||||||    
T  51362553 taaaactactattaaaccttta 51362532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 1420744 - 1420859
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||| || ||||||||||  ||||||||||| ||||||||||||||||| |||| |||||||  ||||||||| ||||| | |||||||| ||||| ||    
T  1420744 gggggtcataactgccacaaatgcaaaacttatggggcggttttgtagttctttttcttaggggaccaaaatcgtaactttgggaaagttaaggggctaa 1420843  T
Q  549 aactgctattaagcct 564  Q
    ||||||||||||||||    
T  1420844 aactgctattaagcct 1420859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 446 - 552
Target Start/End: Original strand, 2837095 - 2837204
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    |||||| ||||||||||||| ||| ||| |||||||||||| |||||||||||  |||||| ||||||| |||||||| |||||||  ||||||||| ||    
T  2837095 ccttggagggccaaaactgctacaattgtaaaacttagggggcggttttgtagcttttttttcttagggggccaaaattgcaacttcttgaaagttaagg 2837194  T
Q  543 ggcgaaaact 552  Q
    ||||||||||    
T  2837195 ggcgaaaact 2837204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 446 - 571
Target Start/End: Original strand, 3658120 - 3658246
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||| ||||||||||| ||||||||||||||||| || | ||||| ||||||||| |||| ||   ||||||||||||||  | |||||||| ||     
T  3658120 ccttggggagccaaaactgctacagttgcaaaacttagaggacagttttttagtttttttcttaagggatcaaaatcgcaacttcataaaagttagagga 3658219  T
Q  545 cgaaaactgctattaagcctttattta 571  Q
    |||||||||||||||| |||| |||||    
T  3658220 cgaaaactgctattaaaccttaattta 3658246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 447 - 563
Target Start/End: Complemental strand, 6207294 - 6207176
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||| ||||||||||| ||||||| |||||||| ||||| |||||||||||||||  ||||||   |||||||| |||||| |  |||||||||| |    
T  6207294 cttggggagccaaaactgctacagttgtaaaacttatggggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgctaaagttagggag 6207195  T
Q  545 cgaaaactgctattaagcc 563  Q
    |||||||||||||||||||    
T  6207194 cgaaaactgctattaagcc 6207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 483 - 573
Target Start/End: Complemental strand, 21957618 - 21957529
Alignment:
Q  483 ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttatttaaa 573  Q
    |||||||||||||||||||||  |||||| | |||||||||||||| | ||||||||||| || ||||||| |||||||||||||||||||    
T  21957618 ggggcggttttgtagttttttt-ttagggggtcaaaatcgcaactttgagaaagttagggagctaaaactgatattaagcctttatttaaa 21957529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 448 - 560
Target Start/End: Original strand, 16292465 - 16292578
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||||||||||| | |||||||||||||||||||| || ||||||||||||||  |  | | |  ||||||||||||| |||||||||||||||||    
T  16292465 ttggggggccaaaactactacagttgcaaaacttaggggacgattttgtagtttttttttctgagggtaaaaatcgcaacttcgtgaaagttagggggcg 16292564  T
Q  547 aaaactgctattaa 560  Q
    |||| || ||||||    
T  16292565 aaaattgttattaa 16292578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 20112350 - 20112463
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||  |||||||||| |||| |||||||||||| |||| ||| ||| |||||||||||||||| |  ||||||||  ||| |||    
T  20112350 gggggccaaaactgccacatatgcaaaactttgggggcggttttgtagtatttttctttgggggccaaaatcgcaactttggaaaagttagaaggctaaa 20112449  T
Q  550 actgctattaagcc 563  Q
    |||| |||||||||    
T  20112450 actgttattaagcc 20112463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 562
Target Start/End: Original strand, 27978899 - 27979009
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| ||||||||| | ||||| |||||||||||| |||||||||||||||||  |||  | |||||||||||||||| || |||||||||||||||||    
T  27978899 gggggtcaaaactgctagagttgtaaaacttaggggacggttttgtagtttttt--ttaaagggccaaaatcgcaacttcgttaaagttagggggcgaaa 27978996  T
Q  550 actgctattaagc 562  Q
    | || ||||||||    
T  27978997 aatgttattaagc 27979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 2016988 - 2017103
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||||||||||||  |||||||||||||||| ||  ||||||||||||||||   |||| |  ||||||||||||||||   |||||||| ||||| ||    
T  2016988 gggggccaaaactgttacagttgcaaaacttatggatggttttgtagtttttttttcttatgaggccaaaatcgcaactttaggaaagttatggggctaa 2017087  T
Q  549 aactgctattaagcct 564  Q
    ||||||||||||||||    
T  2017088 aactgctattaagcct 2017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 446 - 566
Target Start/End: Complemental strand, 10059802 - 10059679
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||||||||||  |||||| ||||||| |||||||||  || ||   |||| ||| ||    
T  10059802 ccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagtttttttttcttagggggccaaaatcataatttcaagaaaattaagg 10059703  T
Q  543 ggcgaaaactgctattaagccttt 566  Q
    |||||||||| ||||||| |||||    
T  10059702 ggcgaaaactactattaaaccttt 10059679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 453 - 563
Target Start/End: Original strand, 10059899 - 10060013
Alignment:
Q  453 gggccaaaactgccacagttgcaaaactta-ggggcggttttgtag---ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||   |||||| |||| || || ||||||||||||| |  ||| ||||||| | ||    
T  10059899 gggccaaaactgccacagatgcaaaacttagggggcggttttgtagttttttttttcttaaggggcaaaaatcgcaactttgaaaaaattaggggtctaa 10059998  T
Q  549 aactgctattaagcc 563  Q
    |||||||||||||||    
T  10059999 aactgctattaagcc 10060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 454 - 565
Target Start/End: Complemental strand, 21451569 - 21451457
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||||||||  ||||||| ||||| | || |||||||||||||  || |||| || ||||||||||||| | |||||||||| ||| ||||||    
T  21451569 ggccaaaactgccacaagtgcaaaatttaggagacgtttttgtagtttttatctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaact 21451470  T
Q  553 gctattaagcctt 565  Q
    |||||||||||||    
T  21451469 gctattaagcctt 21451457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 35615407 - 35615315
Alignment:
Q  472 tgcaaaacttagg-ggcggttttgtagttttttcctt-agggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagc 562  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||||    ||||||||||||| ||||||||||||||||    
T  35615407 tgcaaaacttaggaggcagttttgtagttttttcctttagggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 51371659 - 51371779
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||||||||||||| || | ||||  |||||||| ||| ||||||||| |||||||  | | ||  ||||||||||||||| | |||||||||||||    
T  51371659 ccttggggggccaaaacggctatagtttaaaaacttaagggacggttttgttgtttttttttaaagggaccaaaatcgcaacttcgagaaagttaggggg 51371758  T
Q  545 cgaaaactgctattaagcctt 565  Q
    |||||||| ||||||||||||    
T  51371759 cgaaaactactattaagcctt 51371779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 452 - 554
Target Start/End: Complemental strand, 6637178 - 6637075
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||| |||||| || |||||||||||||||| ||| |||||||||| |||||| |||||||  ||||||||||||| | |||||||||| ||||| ||||    
T  6637178 ggggtcaaaaccgctacagttgcaaaacttaagggacggttttgtaatttttttcttaggggaccaaaatcgcaacatcgtgaaagttaaggggcaaaaa 6637079  T
Q  551 ctgc 554  Q
    ||||    
T  6637078 ctgc 6637075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 14060903 - 14061018
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||| || |||||||||||| | ||||||||| |||||| ||||||| |||||||||||||||| |  ||| |||||| |  ||    
T  14060903 gggggccaaaactgccacagatgtaaaacttaggggacagttttgtagttttttttcttagggagccaaaatcgcaactttgaaaaaattagggagttaa 14061002  T
Q  549 aactgctattaagcct 564  Q
    | ||||||||||||||    
T  14061003 agctgctattaagcct 14061018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 25909601 - 25909486
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||||||||||  |||||  ||||||||||||||| ||||||| |||||||||  ||||||| ||||||||| |||||| |  ||||||||||||  ||    
T  25909601 gggggccaaaacctccacaagtgcaaaacttagggggcggttttatagttttttttcttagggggccaaaatcacaactttggaaaagttagggggttaa 25909502  T
Q  549 aactgctattaagcct 564  Q
    ||||||||||||||||    
T  25909501 aactgctattaagcct 25909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 4796240 - 4796353
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||| |||||||||| | |||||||||| || |||||| ||| ||| |||||||| |||| || |   |||||||||||| |||    
T  4796240 gggggccaaaactgccacaggtgcaaaacttaaagggcggttttataatttttttctttggg-gccaaaattgcaattttggataagttagggggctaaa 4796338  T
Q  550 actgctattaagcct 564  Q
    |||||||||||||||    
T  4796339 actgctattaagcct 4796353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 561
Target Start/End: Complemental strand, 8070739 - 8070630
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||||||||||| | ||||| ||| |||| |||||||| |||||| ||||||| |||||| | ||||||| |  ||||||||||||  ||||    
T  8070739 gggggccaaaactgccacagatacaaaatttatgggcagttttgtaatttttttcttaggg-gccaaagttgcaactttggaaaagttagggggttaaaa 8070641  T
Q  551 ctgctattaag 561  Q
    |||||||||||    
T  8070640 ctgctattaag 8070630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 51362739 - 51362851
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttc---cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||| |||||||||| ||||||||||||||||| || ||||||||||||||||    |||| ||   ||||||| |||||| || ||||||||||| |||    
T  51362739 ggggaccaaaactgctacagttgcaaaacttagaggtggttttgtagttttttttttcttaagggatcaaaatcacaactttgtaaaagttaggggacga 51362838  T
Q  548 aaactgctattaa 560  Q
    |||||||||||||    
T  51362839 aaactgctattaa 51362851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 6207374 - 6207491
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc----cttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||| |||||||  ||||||||||||||| |||||||||||||||||     ||||||| ||||||||| ||||||   |||| |||||||||    
T  6207374 gggggccaaaattgccacaaatgcaaaacttagggggcggttttgtagttttttttcttcttaggg-gccaaaatcacaactttaggaaaattagggggc 6207472  T
Q  546 gaaaactgctattaagcct 564  Q
     ||||||||||||||||||    
T  6207473 taaaactgctattaagcct 6207491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 453 - 564
Target Start/End: Original strand, 11824398 - 11824513
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc---cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||||||||| | |||||||||||||||||||| ||  |||||||||||||    ||| | | |||||||||||||||| || |||||||||||||| |    
T  11824398 gggccaaaactactacagttgcaaaacttagggggcgaatttgtagttttttttttctttgagagccaaaatcgcaacttcgtaaaagttagggggcgga 11824497  T
Q  549 aactgctattaagcct 564  Q
    ||||| ||||||||||    
T  11824498 aactgttattaagcct 11824513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 513 - 566
Target Start/End: Complemental strand, 43074666 - 43074613
Alignment:
Q  513 gccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttt 566  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  43074666 gccaaaatcgcaacttcgtgaaagttagggggcgaaaattgctattaagccttt 43074613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 483 - 563
Target Start/End: Complemental strand, 49185651 - 49185571
Alignment:
Q  483 ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||| | |||||||||||||  |||||||||||||||||    
T  49185651 ggggcggttttgtagttttttttcttagggggccaaaatcgcaacttgg-gaaagttagggggttaaaactgctattaagcc 49185571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 487 - 566
Target Start/End: Complemental strand, 19909249 - 19909170
Alignment:
Q  487 cggttttgtagttttt-tccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttt 566  Q
    |||||||||||||||| | ||||||| |||||||||||||||| | |||||||||||||  ||||||||||||||||||||    
T  19909249 cggttttgtagtttttcttcttaggg-gccaaaatcgcaactttgagaaagttagggggttaaaactgctattaagccttt 19909170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 474 - 560
Target Start/End: Complemental strand, 37831683 - 37831595
Alignment:
Q  474 caaaacttagggg-cggttttgta-gttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 560  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||  | ||| ||||||||| ||||||||||||||    
T  37831683 caaaacttagggggcggttttgtaagtttttttcttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaa 37831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 448 - 563
Target Start/End: Complemental strand, 42526081 - 42525965
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||||||||||| | |||||||||||||| | |||||||||||||||||||||  ||| || |||||||| |||||||    ||| |||||| ||     
T  42526081 ttggggggccaaaactactacagttgcaaaactaatggggcggttttgtagttttttttttaaggggccaaaattgcaactttaaaaaaattagggagct 42525982  T
Q  547 aaaactgctattaagcc 563  Q
    |||| ||||||||||||    
T  42525981 aaaattgctattaagcc 42525965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 562
Target Start/End: Complemental strand, 54983957 - 54983849
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||| |||||||| ||| ||||||||||||||||  ||||| || ||||||  |||||| |||||| ||||| ||| || ||||||||||| ||||||    
T  54983957 gggggctaaaactgctacaattgcaaaacttagggggcgttttataatttttt--ttagggggccaaa-tcgcatcttcgtaaaagttaggggacgaaaa 54983861  T
Q  551 ctgctattaagc 562  Q
    ||||||||||||    
T  54983860 ctgctattaagc 54983849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 2837013 - 2836898
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||  ||||  ||||||||||||||| |||||||||||||||||  ||| ||| |||||||||||| ||| |  ||||||||||||  ||    
T  2837013 gggggccaaaactctcacacatgcaaaacttagggggcggttttgtagttttttttctttgggggccaaaatcgcagctttggaaaagttagggggttaa 2836914  T
Q  549 aactgctattaagcct 564  Q
    ||||| ||||||||||    
T  2836913 aactgttattaagcct 2836898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 452 - 560
Target Start/End: Complemental strand, 13825993 - 13825884
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||  |||||||||| |||||||||| |||  |||||| |||||||  |||||||||||||||  | ||| ||| ||||| |||    
T  13825993 ggggccaaaactgccacaggggcaaaacttaagggcggttttttagtttttttttcttaggggcccaaaatcgcaacttcttaaaactta-ggggctaaa 13825895  T
Q  550 actgctattaa 560  Q
    |||||||||||    
T  13825894 actgctattaa 13825884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 454 - 561
Target Start/End: Complemental strand, 14016836 - 14016722
Alignment:
Q  454 ggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc------cttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    ||||||||||||||||  | ||||||||| |||||||||||||||||||||       ||||||  |||||||||||||||| | ||||||||||||||     
T  14016836 ggccaaaactgccacaaatacaaaacttaaggggcggttttgtagtttttttttttttcttaggaggccaaaatcgcaactttgggaaagttagggggct 14016737  T
Q  547 aaaactgctattaag 561  Q
    ||||| |||||||||    
T  14016736 aaaaccgctattaag 14016722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 2654169 - 2654283
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| |||||||||||||  ||||||||||||||| | |||||||||| ||||  ||||||  |||||||  |||||| | |||||||||||| | |||    
T  2654169 gggggtcaaaactgccacatatgcaaaacttagggggcagttttgtagtattttttttaggggaccaaaataacaactttgggaaagttaggggcctaaa 2654268  T
Q  550 actgctattaagcct 564  Q
    ||| |||||||||||    
T  2654269 actactattaagcct 2654283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 447 - 540
Target Start/End: Original strand, 21451643 - 21451736
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttag 540  Q
    |||||||||||||| |||| ||||||| |||||||||||  ||||||| ||||||||| ||||||| ||||||| |||||||| | |||||||||    
T  21451643 cttggggggccaaagctgctacagttgtaaaacttagggaacggttttatagtttttt-cttagggggccaaaagcgcaactttgggaaagttag 21451736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 27978805 - 27978695
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| |||||||||||||  |||||||||||   ||| |||||||| |||||| ||||||| | |||||||||||||| | ||||||||| ||||  ||    
T  27978805 gggggtcaaaactgccacaaatgcaaaacttatatggcagttttgtaatttttttcttagggggtcaaaatcgcaactttgagaaagttagagggcttaa 27978706  T
Q  550 actgctattaa 560  Q
    |||||||||||    
T  27978705 actgctattaa 27978695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 42526156 - 42526258
Alignment:
Q  457 caaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgct 555  Q
    |||||||||||||  ||||||||||| ||| |||||||||||||||||  ||| || || |||||||||||||   |||||||||||||  |||||||||    
T  42526156 caaaactgccacatatgcaaaacttatgggacggttttgtagtttttt--ttatggggcaaaaatcgcaactttaagaaagttagggggttaaaactgct 42526253  T
Q  556 attaa 560  Q
    |||||    
T  42526254 attaa 42526258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 52462988 - 52463101
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||| || || ||||||||||| |||  ||||||||| |||||| ||||| |  ||||||||||||||| |  ||| ||||||||| |||    
T  52462988 gggggccaaaactgtcatagatgcaaaacttaaggggcgttttgtagttttttttcttagaggcccaaaatcgcaactttgaaaaaattagggggctaaa 52463087  T
Q  550 actgctattaagcc 563  Q
    |||| |||||||||    
T  52463088 actgttattaagcc 52463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 468 - 565
Target Start/End: Complemental strand, 12719545 - 12719449
Alignment:
Q  468 cagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctt 565  Q
    ||||||||||||||||||| |  ||||||||||||||  |||||| |||||||||| || ||  ||||| ||| |||||||||||||||||||| ||||    
T  12719545 cagttgcaaaacttagggggcaattttgtagtttttt--ttagggggccaaaatcgtaaatttatgaaaattaaggggcgaaaactgctattaaacctt 12719449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 451 - 557
Target Start/End: Complemental strand, 18937354 - 18937248
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| |||||||||||||||||||| || |||| || ||||||  |||||  |||||||| ||||||| ||||||||||| ||  ||||    
T  18937354 gggggccaaaactgctacagttgcaaaacttaggggacgattttataatttttt-tttaggaggccaaaattgcaacttcgtgaaagttagaggaagaaa 18937256  T
Q  550 actgctat 557  Q
     |||||||    
T  18937255 cctgctat 18937248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 561
Target Start/End: Original strand, 51233677 - 51233786
Alignment:
Q  451 gggggccaaaactgccacagttg-caaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaac-ttagtgaaagttagggggcgaa 548  Q
    ||||||||||||||| ||||||| ||||| | ||||||| ||||||||||||||  || ||| |||||||||||||| || || ||||||| ||||| ||    
T  51233677 gggggccaaaactgctacagttgccaaaattaaggggcgattttgtagtttttt--tttggg-gccaaaatcgcaacttttgtaaaagttaaggggcaaa 51233773  T
Q  549 aactgctattaag 561  Q
    |||| ||||||||    
T  51233774 aactactattaag 51233786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 528
Target Start/End: Original strand, 6637265 - 6637341
Alignment:
Q  453 gggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    ||||||||||||||| |  ||||||||||| |||||| |||||||||||||| ||||||| || ||||||| |||||    
T  6637265 gggccaaaactgccagaaatgcaaaacttaaggggcgattttgtagtttttttcttagggggctaaaatcgaaactt 6637341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 451 - 528
Target Start/End: Original strand, 8965716 - 8965790
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||  ||||||  ||||||||||||||||    
T  8965716 ggggaccaaaactgccacagatgcaaaacttagggggcggttttatagttttt--cttagg--gccaaaatcgcaactt 8965790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 446 - 560
Target Start/End: Complemental strand, 21322826 - 21322710
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||||| |||||||||||  | |||||||||||||| || || |||||||||||||||  ||||| |    |||||||||||||  |||||||||| ||    
T  21322826 ccttgggaggccaaaactgttaaagttgcaaaacttaaggagcagttttgtagttttttttcttagagaaaaaaaatcgcaacttcatgaaagttagagg 21322727  T
Q  544 gcgaaaactgctattaa 560  Q
    ||||||| |||||||||    
T  21322726 gcgaaaattgctattaa 21322710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 446 - 520
Target Start/End: Complemental strand, 21597520 - 21597444
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagt-tttttccttagggtgccaaaat 520  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||||| |||| ||||| ||||||| || |||||    
T  21597520 ccttggggtgccaaaactgctacagttgcaaaacttaggggacggttttatagtattttttcttagggggcgaaaat 21597444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 503
Target Start/End: Original strand, 11983592 - 11983643
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtttttt 503  Q
    |||||||||||| | ||  |||||||||||||||||||||||||||||||||    
T  11983592 ggggccaaaacttctacgattgcaaaacttaggggcggttttgtagtttttt 11983643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 20737434 - 20737545
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||||||||||||| | |||||||||| ||| |||||| |||| ||| |||||| |||||||   |||||||||||||| | ||||||||||  |  ||    
T  20737434 gggggccaaaactgctatagttgcaaaatttagggggcgattttatagctttttttcttagggaatcaaaatcgcaactttgagaaagttaggatgttaa 20737533  T
Q  549 aactgctattaa 560  Q
    ||||||||||||    
T  20737534 aactgctattaa 20737545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 448 - 499
Target Start/End: Complemental strand, 21871496 - 21871445
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtt 499  Q
    |||| ||||||||||||| ||||||||||||||||||| | |||||||||||    
T  21871496 ttggagggccaaaactgctacagttgcaaaacttagggacagttttgtagtt 21871445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 448 - 499
Target Start/End: Complemental strand, 21927357 - 21927306
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtt 499  Q
    |||| ||||||||||||| ||||||||||||||||||| | |||||||||||    
T  21927357 ttggagggccaaaactgctacagttgcaaaacttagggacagttttgtagtt 21927306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 3369904 - 3369842
Alignment:
Q  506 ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttat 568  Q
    |||||| ||||||||||||||||  ||| | ||||||||| ||||||| ||||||||||||||    
T  3369904 ttagggggccaaaatcgcaacttcttgatacttagggggcaaaaactgatattaagcctttat 3369842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 566
Target Start/End: Original strand, 4411493 - 4411543
Alignment:
Q  516 aaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttt 566  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||| |||||    
T  4411493 aaaatcgcaacttcgtgaaaattagggggcgaaaactgttattaaaccttt 4411543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 528
Target Start/End: Complemental strand, 16292382 - 16292305
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    |||||||||||||||||||  |||||||||||| ||||| ||||||||||||||  ||| ||  |||||||||||||||    
T  16292382 gggggccaaaactgccacatgtgcaaaacttagagggcgattttgtagtttttt-tttaagggaccaaaatcgcaactt 16292305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 565
Target Start/End: Complemental strand, 29697631 - 29697522
Alignment:
Q  456 ccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgc 554  Q
    ||||||||||||||| ||||||||||| |||||||||||||| ||||||  || | | |||||||||||||||| |  ||  |||| || | ||||||||    
T  29697631 ccaaaactgccacagatgcaaaacttagggggcggttttgtaatttttttgtttgag-gccaaaatcgcaactttgataattttagaggactaaaactgc 29697533  T
Q  555 tattaagcctt 565  Q
    |||||| ||||    
T  29697532 tattaaacctt 29697522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 528
Target Start/End: Complemental strand, 47999642 - 47999564
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttc-cttagggtgccaaaatcgcaactt 528  Q
    |||| |||||||||||||| || |||||||| || ||||||||||||||||||  ||||||| || |||||||||||||    
T  47999642 ggggtcaaaactgccacagatgtaaaacttatggagcggttttgtagttttttttcttagggggcaaaaatcgcaactt 47999564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 54855503 - 54855561
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagtttttt 503  Q
    |||||||||||||||||| | | |||| |||||||||||| ||||||||||||||||||    
T  54855503 ccttggggggccaaaacttctaaagttacaaaacttagggagcggttttgtagtttttt 54855561  T

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Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 21597602 - 21597655
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttttt 503  Q
    |||||||||||||||||||  ||||||| ||||||| |||||||||||||||||    
T  21597602 gggggccaaaactgccacatatgcaaaatttaggggacggttttgtagtttttt 21597655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 528
Target Start/End: Complemental strand, 2180875 - 2180811
Alignment:
Q  465 ccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    |||||| ||||||| ||||||| || |||||||||||||| ||||||| || |||||||||||||    
T  2180875 ccacagatgcaaaatttaggggacgattttgtagtttttttcttagggagctaaaatcgcaactt 2180811  T

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Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 572
Target Start/End: Original strand, 34773511 - 34773616
Alignment:
Q  466 cacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||| ||||||||||||||| || ||||||||||||||  |||||| || ||||| ||||||| |  || ||| ||| || ||||| ||||||||||||    
T  34773511 cacagatgcaaaacttagggggcgattttgtagtttttt--ttagggggctaaaatagcaactttggaaatgtttgggtgctaaaacggctattaagcct 34773608  T
Q  565 ttatttaa 572  Q
    || |||||    
T  34773609 ttttttaa 34773616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 562
Target Start/End: Complemental strand, 40489324 - 40489212
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtttt-ttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||||| || | ||| || ||||||| |||||||| |||  ||  |||||| ||||||||||||||||   ||||| |||||||| |||    
T  40489324 gggggccaaaactgccaaagatccaatacataggggctgttttgtattttaattagttagggggccaaaatcgcaacttttagaaagatagggggctaaa 40489225  T
Q  550 actgctattaagc 562  Q
    | ||| |||||||    
T  40489224 agtgcaattaagc 40489212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 515 - 563
Target Start/End: Original strand, 43074832 - 43074880
Alignment:
Q  515 caaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    |||||||||||||| | |||||||||||||| |||| ||||||||||||    
T  43074832 caaaatcgcaactttgggaaagttagggggctaaaattgctattaagcc 43074880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 569
Target Start/End: Complemental strand, 1186715 - 1186652
Alignment:
Q  506 ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttatt 569  Q
    |||||| ||||||||||||||||    ||||||||||||| |||| ||| ||||||||||||||    
T  1186715 ttagggggccaaaatcgcaacttttaaaaagttagggggccaaaagtgcaattaagcctttatt 1186652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 563
Target Start/End: Complemental strand, 19537027 - 19536945
Alignment:
Q  483 ggggcggttttgtag--ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    |||||||||||||||  |||||| |||||||  |||||||| |||||| | ||||  |||||||  |||||||||||||||||    
T  19537027 ggggcggttttgtagcttttttttcttaggggaccaaaatcacaactttgggaaacatagggggacaaaactgctattaagcc 19536945  T

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Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 561
Target Start/End: Original strand, 35615433 - 35615479
Alignment:
Q  514 ccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaag 561  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  35615433 ccaaaatcgcaacttcgtgaaagtta-ggggtgaaaactgctattaag 35615479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 565
Target Start/End: Original strand, 37832946 - 37833013
Alignment:
Q  498 ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctt 565  Q
    |||||| |||||||   ||||||||||||||   |||||||||| ||| |||||||||||||||||||    
T  37832946 tttttttcttaggggttcaaaatcgcaactttaggaaagttaggaggctaaaactgctattaagcctt 37833013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 486
Target Start/End: Original strand, 43074788 - 43074823
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg 486  Q
    |||||||||||||||||||| |||||||||||||||    
T  43074788 gggggccaaaactgccacagatgcaaaacttagggg 43074823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 565
Target Start/End: Complemental strand, 52865493 - 52865378
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||| ||||   |||||||||||||| ||||| |||||||||||  ||||| |  |||||||||||||||  | ||| ||| |||||  ||    
T  52865493 ggggccaaaactggcacatgggcaaaacttagggggcggttctgtagttttttttcttagaggaccaaaatcgcaacttcttaaaacttatggggctgaa 52865394  T
Q  550 actgctattaagcctt 565  Q
    ||||||||||| ||||    
T  52865393 actgctattaaacctt 52865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 487 - 564
Target Start/End: Original strand, 30064337 - 30064415
Alignment:
Q  487 cggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||| |||  |||||| ||||||||||||||||  | ||| |||||| || |||||| |||||||||||    
T  30064337 cggttttgtagtttatttagttagggagccaaaatcgcaacttcttaaaacttagggagccaaaactactattaagcct 30064415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 448 - 482
Target Start/End: Complemental strand, 43074705 - 43074671
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactta 482  Q
    |||||||||||||||||| ||||||||||||||||    
T  43074705 ttggggggccaaaactgctacagttgcaaaactta 43074671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 446 - 570
Target Start/End: Complemental strand, 46195 - 46069
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||| ||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| ||||||| |  ||||||||||||| ||||||||||||||    
T  46195 ccttagggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttcttttcttagggggttaaaatcgcaacttcgtgaaagttagggg 46096  T
Q  544 gcgaaaactgctattaagcctttattt 570  Q
    |||||||||||||| ||||||||||||    
T  46095 gcgaaaactgctataaagcctttattt 46069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 46275 - 46328
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtttttt 503  Q
    |||||||||||||| ||||| |||||||||||| |||| |||||||| ||||||    
T  46275 gggggccaaaactgtcacagatgcaaaacttagagggcagttttgtaatttttt 46328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 6e-36; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 446 - 566
Target Start/End: Complemental strand, 17071025 - 17070904
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| |||||||||||||||||||   |||||||| |||||||  |||||| |||||||||||||||| |||||||||| ||||    
T  17071025 ccttggggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaagggg 17070926  T
Q  545 cgaaaactgctattaagccttt 566  Q
    ||||||||||||||||||||||    
T  17070925 cgaaaactgctattaagccttt 17070904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 446 - 566
Target Start/End: Original strand, 17577247 - 17577368
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| |||||||||||||||||||   |||||||| |||||||  |||||| |||||||||||||||| |||||||||| ||||    
T  17577247 ccttggggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaagggg 17577346  T
Q  545 cgaaaactgctattaagccttt 566  Q
    ||||||||||||||||||||||    
T  17577347 cgaaaactgctattaagccttt 17577368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 446 - 566
Target Start/End: Complemental strand, 41487319 - 41487197
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttt-ttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||| || ||||||| | |||||||||||||| |||||| || ||||    
T  41487319 ccttgggcggccaaaactgctacagttgcaaaacttagggggcggttttgtagttttgtttcttagggggtcaaaatcgcaacttcgtgaaaattcgggg 41487220  T
Q  544 gcgaaaactgctattaagccttt 566  Q
    |||||||||||||||||||||||    
T  41487219 gcgaaaactgctattaagccttt 41487197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 23702244 - 23702122
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttc----cttagggtgccaaaatcgcaacttagtgaaagttagg 541  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||     |||||||  ||||||||| ||||| |||||||||| |    
T  23702244 ccttgggggaccaaaactactacagttgcaaaacttaggggcggttttgtagttttttttcttcttaggggaccaaaatcgtaactttgtgaaagttaag 23702145  T
Q  542 gggcgaaaactgctattaagcct 564  Q
    |||||||||||||||||||||||    
T  23702144 gggcgaaaactgctattaagcct 23702122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 449 - 558
Target Start/End: Complemental strand, 22192417 - 22192307
Alignment:
Q  449 tggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    ||||||| ||||||||| ||||||||||||| || ||||||||||| || |||||| ||||||| |||||||||||||||| |||||||||| |||||||    
T  22192417 tggggggtcaaaactgctacagttgcaaaacataaggggcggttttttaatttttttcttagggggccaaaatcgcaacttcgtgaaagttaaggggcga 22192318  T
Q  548 aaactgctatt 558  Q
    |||||||||||    
T  22192317 aaactgctatt 22192307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 446 - 563
Target Start/End: Original strand, 9762396 - 9762513
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||  | | || |||||||||||||||| || ||||||||| |||    
T  9762396 ccttggggagccaaaattgctacagttgcaaaacttagggacggttttgtagtttttttttcaaggggccaaaatcgcaacttcgtaaaagttaggtggc 9762495  T
Q  546 gaaaactgctattaagcc 563  Q
    ||||| ||||||||||||    
T  9762496 gaaaattgctattaagcc 9762513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 453 - 553
Target Start/End: Original strand, 14880537 - 14880638
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||| ||||||| ||||||||||||||||||| ||    
T  14880537 gggccaaaactgcgacagttgcaaaacttaggaggcggttttgtggtttttttcttagggggccaaaattgcaacttcgtgaaagttagggggcgaacac 14880636  T
Q  552 tg 553  Q
    ||    
T  14880637 tg 14880638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 452 - 564
Target Start/End: Complemental strand, 6807284 - 6807172
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    |||| ||||||||| ||||||||||||||||||||  | ||||||||||||| ||||||| |||||||||||||||| | |||||||| ||||| |||||    
T  6807284 ggggtcaaaactgctacagttgcaaaacttagggggtggtttgtagtttttttcttagggggccaaaatcgcaacttcgagaaagttatggggcaaaaac 6807185  T
Q  552 tgctattaagcct 564  Q
    | |||||||||||    
T  6807184 tactattaagcct 6807172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 448 - 566
Target Start/End: Complemental strand, 35213145 - 35213028
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcg 546  Q
    |||||||||||||||||  |||||||||||||||| ||||| |||||||||||||||  |||||| | |||||||||||||| || |||||||| |||||    
T  35213145 ttggggggccaaaactgttacagttgcaaaacttaaggggcagttttgtagtttttt--ttagggggtcaaaatcgcaactttgtcaaagttagtgggcg 35213048  T
Q  547 aaaactgctattaagccttt 566  Q
    ||||| ||||||||||||||    
T  35213047 aaaaccgctattaagccttt 35213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 30539191 - 30539305
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| |||||||  ||||||||||||||| | ||||||||  |||| ||    
T  30539191 gggggccaaaactgccacagatgcaaaacttaggggacggttttgtagttttttttcttaggggaccaaaatcgcaactttgggaaagtta-agggctaa 30539289  T
Q  549 aactgctattaagcct 564  Q
    ||||||||||||||||    
T  30539290 aactgctattaagcct 30539305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 561
Target Start/End: Complemental strand, 18093023 - 18092913
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||||||||||   ||||||||||| |||||||||||||||||| |||| |  ||||||||||||||||  || || ||||||||| ||||    
T  18093023 gggggccaaaactgccacagggtcaaaacttaggtgcggttttgtagtttttttcttacgaggccaaaatcgcaacttcttgtaacttagggggctaaaa 18092924  T
Q  551 ctgctattaag 561  Q
    |||||||||||    
T  18092923 ctgctattaag 18092913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 20853490 - 20853377
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||  |||||||||||||||  ||||||||||||||||  |||||| | ||||||||||||||   |||||||||||||| |||    
T  20853490 gggggccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttt-ttagggggtcaaaatcgcaacttcaagaaagttagggggctaaa 20853392  T
Q  550 actgctattaagcct 564  Q
    |||||||||||||||    
T  20853391 actgctattaagcct 20853377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 27545556 - 27545666
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcg-gttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||||| ||| ||| ||||||||||||   ||||||||||||||| ||||||| |||||||||||||||| |||| ||||||||||| |||    
T  27545556 gggggccaaaactgctacaattgtaaaacttaggggatagttttgtagtttttttcttagggggccaaaatcgcaacttcgtgatagttagggggcaaaa 27545655  T
Q  550 actgctattaa 560  Q
    || ||||||||    
T  27545656 accgctattaa 27545666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 459 - 562
Target Start/End: Original strand, 33298545 - 33298646
Alignment:
Q  459 aaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctat 557  Q
    ||||||| || ||||||||||||||||| |||||||||||||||   ||||||| |||||||||||||||| |||||||||||| |||||||||||||||    
T  33298545 aaactgctactgttgcaaaacttagggggcggttttgtagtttt---cttagggggccaaaatcgcaacttcgtgaaagttaggaggcgaaaactgctat 33298641  T
Q  558 taagc 562  Q
     ||||    
T  33298642 caagc 33298646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 564
Target Start/End: Complemental strand, 39889888 - 39889771
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||| |||||||||||| |||||||||||||||| || ||| ||||||| ||||||| | |||| |||||||| ||||||| |||||||||| | |||    
T  39889888 cttgggaggccaaaactgctacagttgcaaaacttatggagcgattttgtaattttttcttaaggg-gccaaaattgcaacttcgtgaaagttaagaggc 39889790  T
Q  546 gaaaactgctattaagcct 564  Q
    |||||||||||||||||||    
T  39889789 gaaaactgctattaagcct 39889771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 483 - 566
Target Start/End: Complemental strand, 37813243 - 37813159
Alignment:
Q  483 ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttt 566  Q
    |||||||||||||||||||||  ||||||| |||||||||| || || |||||||||||||||||||||||||||||||||||||    
T  37813243 ggggcggttttgtagttttttttcttagggggccaaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaagccttt 37813159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 454 - 565
Target Start/End: Original strand, 521647 - 521758
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    |||||||| ||| |||  ||||||||||| ||||||||||||| |||||| || ||||  | ||||||||||||| |||||| |||||||| ||||||||    
T  521647 ggccaaaattgctacaagtgcaaaacttatgggcggttttgtaatttttttctcaggggtctaaaatcgcaacttcgtgaaaattagggggtgaaaactg 521746  T
Q  554 ctattaagcctt 565  Q
    ||||||||||||    
T  521747 ctattaagcctt 521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 446 - 560
Target Start/End: Original strand, 25144138 - 25144251
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||| ||| ||| |||||||||||| |||| |||||||||||||||| ||||||| || ||||||||||||| ||||| |||||| ||    
T  25144138 ccttggggggccaaaattgcaacaattgcaaaacttagggggtggttttgtagtttttt-cttaggg-gctaaaatcgcaacttcgtgaatgttaggagg 25144235  T
Q  545 cgaaaactgctattaa 560  Q
    |||||| |||||||||    
T  25144236 cgaaaattgctattaa 25144251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 452 - 564
Target Start/End: Original strand, 26824034 - 26824146
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||||| | ||||||||||||||||| | ||||||||| |||||| ||||| | | |||||||||||||| |||||||||| |||| |||||    
T  26824034 ggggccaaaactgctatagttgcaaaacttagggacagttttgtagttttttttcttagagggtcaaaatcgcaacttcgtgaaagtta-ggggtgaaaa 26824132  T
Q  551 ctgctattaagcct 564  Q
    ||||||||| ||||    
T  26824133 ctgctattatgcct 26824146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 454 - 565
Target Start/End: Original strand, 23702338 - 23702450
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||| ||||  ||||||||||||||| |  ||||||| |||||| ||||||| || |||||||||||||   |||||||||||||| ||||||    
T  23702338 ggccaaaactgtcacaaatgcaaaacttaggggacaattttgtaatttttttcttagggggctaaaatcgcaacttttggaaagttagggggctaaaact 23702437  T
Q  553 gctattaagcctt 565  Q
    |||||||||||||    
T  23702438 gctattaagcctt 23702450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 454 - 564
Target Start/End: Original strand, 41602814 - 41602926
Alignment:
Q  454 ggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    ||||||||||| |||||  |||||||||| |||||||||||||||||||||  ||||||  || |||||||||||||  ||||| ||||||||| |||||    
T  41602814 ggccaaaactgtcacaggggcaaaacttaaggggcggttttgtagttttttttcttaggaggctaaaatcgcaactttttgaaacttagggggctaaaac 41602913  T
Q  552 tgctattaagcct 564  Q
    |||||||||||||    
T  41602914 tgctattaagcct 41602926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 564
Target Start/End: Original strand, 28349535 - 28349622
Alignment:
Q  478 acttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||| ||||||||||| |||||| ||||||| |||||||||||||||| | |||||||||||||| |||||| |||||||||||    
T  28349535 acttagggagcggttttgtaatttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagcct 28349622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 446 - 570
Target Start/End: Complemental strand, 3676236 - 3676107
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagtt-ttttccttagggtgccaaaatcgcaacttagtgaaa-----gtta 539  Q
    |||| ||||||||||||||| | ||||||| ||||| ||||||||||||||||| |||| |||||||  |||||||||||| || ||||||     ||||    
T  3676236 ccttagggggccaaaactgctatagttgcataacttgggggcggttttgtagttttttttcttaggg-accaaaatcgcaaattcgtgaaagttaggtta 3676138  T
Q  540 gggggcgaaaactgctattaagcctttattt 570  Q
    |||||||||||||||||||||| ||| ||||    
T  3676137 gggggcgaaaactgctattaagtcttaattt 3676107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 452 - 564
Target Start/End: Complemental strand, 27545453 - 27545343
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    |||||||||||||||| || |||||||||||||| || ||||||||||||||  |||||| | | |||||||||||| |  ||||||||  ||| |||||    
T  27545453 ggggccaaaactgccatagatgcaaaacttagggtcgattttgtagtttttt--ttagggggtcgaaatcgcaactttggaaaagttagacggctaaaac 27545356  T
Q  552 tgctattaagcct 564  Q
    |||||||||||||    
T  27545355 tgctattaagcct 27545343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 544
Target Start/End: Original strand, 17071822 - 17071913
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| | |||||| |||| || | |||||||||||||    
T  17071822 ggggcaaaaactgtcacaggtgcaaaacttaggggcggttttgtagtttttttcttaggg-gtcaaaattgcaattttgggaaagttaggggg 17071913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 544
Target Start/End: Complemental strand, 17576451 - 17576360
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| | |||||| |||| || | |||||||||||||    
T  17576451 ggggcaaaaactgtcacaggtgcaaaacttaggggcggttttgtagtttttttcttaggg-gtcaaaattgcaattttgggaaagttaggggg 17576360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 451 - 566
Target Start/End: Original strand, 29044747 - 29044862
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||  ||||||||||| ||| | ||||||||| ||||| |||||||  ||||||||| |||||   | |||||||||||| |||    
T  29044747 gggggccaaaactgccacaaatgcaaaacttatgggacagttttgtaggttttttcttaggga-ccaaaatcgtaactttagggaagttagggggctaaa 29044845  T
Q  550 actgctattaagccttt 566  Q
    |||||||||||||||||    
T  29044846 actgctattaagccttt 29044862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 453 - 563
Target Start/End: Complemental strand, 45177313 - 45177201
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||| ||||| ||||||||||||||| || ||||||||||||||  |||||||   |||||||||||||| | |||||||||| ||| |||     
T  45177313 gggccaaaactgtcacagatgcaaaacttaggggacgattttgtagttttttttcttaggggatcaaaatcgcaactttgagaaagttaggaggctaaat 45177214  T
Q  551 ctgctattaagcc 563  Q
    |||||||||||||    
T  45177213 ctgctattaagcc 45177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 41487410 - 41487520
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||| |||||| |||| || || ||||||||||||| |  |||||||| |||| ||    
T  41487410 gggggccaaaacagctacagttgcaaaacttagggggcggttttgtagttttttttcttaagg-gctaaaatcgcaactttggaaaagttagagggctaa 41487508  T
Q  549 aactgctattaa 560  Q
    ||||||||||||    
T  41487509 aactgctattaa 41487520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 564
Target Start/End: Complemental strand, 16982707 - 16982625
Alignment:
Q  483 ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||||||||||  |||||||  ||||||| ||||||| ||||||||||||||| |||||||||||| ||||||    
T  16982707 ggggcggttttgtagttttttttcttaggggaccaaaattgcaacttcgtgaaagttagggggtgaaaactgctatcaagcct 16982625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 565
Target Start/End: Complemental strand, 37263475 - 37263356
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttc----cttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||| ||||||| |||| |||||| | | ||||||||||||||     ||||||| | |||||||||||||| || ||||||| |||||    
T  37263475 gggggccaaaactgctacagttgtaaaatttagggagagattttgtagttttttttcttcttagggagtcaaaatcgcaacttcgtaaaagttaaggggc 37263376  T
Q  546 gaaaactgctattaagcctt 565  Q
    ||||||||||||||| ||||    
T  37263375 gaaaactgctattaaacctt 37263356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 562
Target Start/End: Original strand, 32768452 - 32768562
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||| ||| ||||||||||||| || | ||||||||||||||||||  ||||||| | |||||||||||||| ||||||| ||| |   ||||    
T  32768452 gggggccaaaaatgctacagttgcaaaacatatgaggcggttttgtagttttt--cttagggagtcaaaatcgcaacttcgtgaaagctagagaatgaaa 32768549  T
Q  550 actgctattaagc 562  Q
    |||||||||||||    
T  32768550 actgctattaagc 32768562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 454 - 560
Target Start/End: Original strand, 29657904 - 29658009
Alignment:
Q  454 ggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||| || |||||||||||||||| ||||| ||||||| |||||||  ||||   | ||||||||||||||  |||||||||||| |||||||||    
T  29657904 ggccaaaacggctacagttgcaaaacttaaggggcagttttgttgtttttt--ttagatggtcaaaatcgcaacttgatgaaagttagggagcgaaaact 29658001  T
Q  553 gctattaa 560  Q
    ||||||||    
T  29658002 gctattaa 29658009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 450 - 565
Target Start/End: Complemental strand, 45457079 - 45456964
Alignment:
Q  450 ggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||| ||| ||| ||||||||  ||| ||||||||||||||||  ||||||  | |||||| |||||| || ||||||||||||||||    
T  45457079 ggggggccaaaactgctacaattgtaaaacttaaagggtggttttgtagttttttttttagggatc-aaaatcacaacttcgtaaaagttagggggcgaa 45456981  T
Q  549 aactgctattaagcctt 565  Q
    ||||| |||||| ||||    
T  45456980 aactgttattaaacctt 45456964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 25897071 - 25896993
Alignment:
Q  483 ggggcggttttgtagttttttcc-ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 560  Q
    |||||||||||||||||||||   |||||| |||||||||||||||| |  ||||||||||||| ||||||||||||||    
T  25897071 ggggcggttttgtagttttttttgttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 448 - 561
Target Start/End: Complemental strand, 29657820 - 29657702
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc----cttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    ||||||||||||||||||||||  ||||||| ||||||| |||||||||||||||||     ||||| | |||||||||||||||| |  ||||||||||    
T  29657820 ttggggggccaaaactgccacatatgcaaaatttagggggcggttttgtagttttttttcttcttagagggccaaaatcgcaactttgataaagttaggg 29657721  T
Q  543 ggcgaaaactgctattaag 561  Q
     |  |||||| ||||||||    
T  29657720 aggtaaaactcctattaag 29657702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 37813291 - 37813344
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  37813291 gggggccaaaactgccacagatgcaaaacttagggggcggttttgtagtttttt 37813344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 457 - 563
Target Start/End: Original strand, 6807375 - 6807480
Alignment:
Q  457 caaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgct 555  Q
    |||||||||||||  |||||||||||||||  ||||||||||||||||  |||| | | |||||| ||||||| | |||||||||||| | |||| ||||    
T  6807375 caaaactgccacaaatgcaaaacttagggggtggttttgtagtttttt--ttagagggtcaaaattgcaactttgggaaagttaggggactaaaattgct 6807472  T
Q  556 attaagcc 563  Q
    ||||||||    
T  6807473 attaagcc 6807480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 475 - 563
Target Start/End: Original strand, 36688223 - 36688311
Alignment:
Q  475 aaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    |||||||||||||  |||| ||||||||| ||||||| | ||||||| |||||| |  ||||||||||||  |||||||||||||||||    
T  36688223 aaaacttaggggcaattttatagtttttttcttagggggtcaaaatcacaactttgaaaaagttagggggttaaaactgctattaagcc 36688311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 569
Target Start/End: Complemental strand, 37940021 - 37939908
Alignment:
Q  455 gccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    |||||||||||||||  ||||||||||| |||| ||||||||||||||||  ||| || |||||||||||||||| |  ||| ||| | ||| |||||||    
T  37940021 gccaaaactgccacatatgcaaaacttagggggtggttttgtagtttttt--ttaaggggccaaaatcgcaactttgaaaaaattaagaggctaaaactg 37939924  T
Q  554 ctattaagcctttatt 569  Q
    ||||||| || |||||    
T  37939923 ctattaaaccattatt 37939908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 451 - 561
Target Start/End: Original strand, 42218444 - 42218555
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||| |||||||||||| |  |||||||||||||| ||||||||||||||||| ||||  ||| ||||||||||||||  | ||| |||  |||  |||    
T  42218444 gggggtcaaaactgccactggggcaaaacttaggggacggttttgtagtttttttcttatagtgtcaaaatcgcaacttcttaaaacttaaagggttaaa 42218543  T
Q  550 actgctattaag 561  Q
    ||||||||||||    
T  42218544 actgctattaag 42218555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 30539107 - 30539049
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||    
T  30539107 ccttggggggccaaaactgctacagttgtaaaacttagggggcagttttgtagtttttt 30539049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 451 - 528
Target Start/End: Complemental strand, 41602596 - 41602518
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    |||||||||||||||||||   ||||||||||| ||| |||||||||||||||| ||||||| |||||||  |||||||    
T  41602596 gggggccaaaactgccacatgggcaaaacttagcgggtggttttgtagtttttttcttagggagccaaaaaagcaactt 41602518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 3676328 - 3676381
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtttttt 503  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  3676328 ggggaccaaaactgccacagatgcaaaacttagtgggcggttttgtagtttttt 3676381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 472 - 564
Target Start/End: Original strand, 32071236 - 32071326
Alignment:
Q  472 tgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||    ||||||| ||||| ||||||||||||||||||    
T  32071236 tgcaaaacttagggggcggttttgtagtttttt-cttaggg-gtcaaaatcgcaactttagaaaagtta-ggggctaaaactgctattaagcct 32071326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 451 - 561
Target Start/End: Complemental strand, 26823940 - 26823828
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||| ||||||||||||||  |||||||||||||||  | ||||||||||||||  |||| || | |||||||| ||||| | ||||||||| |||  ||    
T  26823940 ggggcccaaaactgccacaaatgcaaaacttagggggtgattttgtagttttttttcttaaggggtcaaaatcgtaactttgagaaagttagagggttaa 26823841  T
Q  549 aactgctattaag 561  Q
    |||||||||||||    
T  26823840 aactgctattaag 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 564
Target Start/End: Original strand, 37263559 - 37263650
Alignment:
Q  472 tgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||||||||||||||||||||| ||||| |   ||||||||||||||   |||||||||| ||  |||| || ||||||||||    
T  37263559 tgcaaaacttaggggcggttttgtagtttttt-cttagtggatcaaaatcgcaacttttggaaagttaggaggttaaaattgatattaagcct 37263650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 454 - 572
Target Start/End: Original strand, 39889976 - 39890096
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaac 551  Q
    |||||||| |||||||| |||||||||||| |||||| |||||||||||||  ||||| | |  |||||||||||||    || |||| || || |||||    
T  39889976 ggccaaaattgccacagatgcaaaacttagagggcggatttgtagttttttttcttagagggtaaaaatcgcaactttaaaaaggttaaggagctaaaac 39890075  T
Q  552 tgctattaagcctttatttaa 572  Q
    ||||||||||||||| |||||    
T  39890076 tgctattaagcctttttttaa 39890096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 506 - 569
Target Start/End: Complemental strand, 755960 - 755897
Alignment:
Q  506 ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttatt 569  Q
    |||||| ||||||||||||||||  |||||  ||| |||| |||||||||||||||||||||||    
T  755960 ttagggggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaagcctttatt 755897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 511
Target Start/End: Original strand, 20853579 - 20853640
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttaggg 511  Q
    ||||||||||| ||| |||||| ||||||||| ||| |||||||||| ||||||||||||||    
T  20853579 gggggccaaaattgctacagttacaaaacttaagggacggttttgtatttttttccttaggg 20853640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 563
Target Start/End: Original strand, 29791223 - 29791310
Alignment:
Q  474 caaaacttagggg-cggttttgtagtttt--ttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 563  Q
    ||||||||||||| |||||||||||||||  ||||||| || | |||||||||||||| ||||||     | |||||||||||||||||||||    
T  29791223 caaaacttagggggcggttttgtagttttttttccttatgggggcaaaatcgcaacttcgtgaaa-----gaggcgaaaactgctattaagcc 29791310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 503
Target Start/End: Original strand, 16982811 - 16982863
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||| |||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  16982811 gggggcaaaactggcacagatgcaaaacttagggggcggttttgtagtttttt 16982863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 566
Target Start/End: Original strand, 22192502 - 22192613
Alignment:
Q  455 gccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    |||||||| || |||||||||||||||||| | ||||||||||||||||| |||| || | ||||||  |||||| |  ||||||||| |   || ||||    
T  22192502 gccaaaacggctacagttgcaaaacttaggagacggttttgtagtttttt-cttaaggggtcaaaattacaactttgaaaaagttaggagattaagactg 22192600  T
Q  554 ctattaagccttt 566  Q
    |||||||||||||    
T  22192601 ctattaagccttt 22192613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 21486765 - 21486706
Alignment:
Q  454 ggccaaaactgccacagttgcaaaactta-ggggcggttttgtagt-tttttccttaggg 511  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||| ||||| |||||||    
T  21486765 ggccaaaaatgccacaggtgcaaaacttagggggcggttttgtagtgttttttcttaggg 21486706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 21486857 - 21486904
Alignment:
Q  457 caaaactgccacagttgcaaaacttagg-ggcggttttgtagtttttt 503  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  21486857 caaaactgctacagttgcaaaacttaggaggcagttttgtagtttttt 21486904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 569
Target Start/End: Complemental strand, 29340849 - 29340762
Alignment:
Q  483 ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttatt 569  Q
    |||||||||||||| ||| |||  ||| || ||||||||||||| ||| | |||  |||||||| |||||||||||||| ||||||||    
T  29340849 ggggcggttttgtattttattttgttaaggggccaaaatcgcaaattatttaaacatagggggccaaaactgctattaaacctttatt 29340762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 44101491 - 44101550
Alignment:
Q  453 gggccaaaactgccacagttgcaaaactt-aggggcggttttgtagttttttccttaggg 511  Q
    ||||||||||||| |||| |||||||||| ||||| | |||||||||||||| |||||||    
T  44101491 gggccaaaactgctacagatgcaaaacttaaggggtgattttgtagtttttttcttaggg 44101550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 565
Target Start/End: Original strand, 44269319 - 44269433
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||| |||||  |||||||||||   ||| |||||  ||||||||| |||||| | |||||||||||||| | |||| ||||||||  |||    
T  44269319 gggggccaaaactaccacaaatgcaaaacttaaaaggcagttttaaagttttttc-ttagggggtcaaaatcgcaactttgagaaaattagggggttaaa 44269417  T
Q  550 actgctattaagcctt 565  Q
    | | ||||||||||||    
T  44269418 attactattaagcctt 44269433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 566
Target Start/End: Complemental strand, 14170501 - 14170419
Alignment:
Q  485 ggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttt 566  Q
    |||||||||||||||| |||  |||||| ||||||||||||||||  | |||  |||||||  |||||||| |||||||||||    
T  14170501 ggcggttttgtagtttatttaattagggggccaaaatcgcaacttcttaaaacatagggggtcaaaactgcaattaagccttt 14170419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 483 - 564
Target Start/End: Complemental strand, 17512178 - 17512096
Alignment:
Q  483 ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||| ||||||||||| |||  |||||| ||||||||||||||||  |||||  |||||||| |||||||| |||| ||||    
T  17512178 ggggcgtttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaatatagggggccaaaactgcaattatgcct 17512096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 483 - 572
Target Start/End: Complemental strand, 23475705 - 23475615
Alignment:
Q  483 ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcctttatttaa 572  Q
    |||||||||||||||||| |||  ||| || | ||||||| ||||||  |||||  |||||||| |||||||| ||||||||||| |||||    
T  23475705 ggggcggttttgtagtttatttagttaaggggtcaaaatcacaacttcttgaaacatagggggccaaaactgcaattaagcctttttttaa 23475615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 560
Target Start/End: Complemental strand, 22846555 - 22846446
Alignment:
Q  453 gggccaaaactgccacagttgcaaaactta-ggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||||| || ||||||||||| ||| || |||||||| |||||| |||||||  ||||||||  || ||   |||||||| ||||| |||     
T  22846555 gggccaaaactgccaaagatgcaaaacttatgggacgattttgtagttttttttcttaggggaccaaaatcataattttaggaaagttatggggctaaat 22846456  T
Q  551 ctgctattaa 560  Q
    ||||||||||    
T  22846455 ctgctattaa 22846446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 1e-33; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 562
Target Start/End: Complemental strand, 32391837 - 32391720
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| ||||||||||||||||||||  | |||||||||||||| |||| || ||||||||| |||||| |||||||||| ||||    
T  32391837 ccttggggggccaaaactgctacagttgcaaaacttagggggtgattttgtagtttttttcttaaggggccaaaatcacaacttcgtgaaagttaagggg 32391738  T
Q  545 cgaaaactgctattaagc 562  Q
    ||||||||||||||||||    
T  32391737 cgaaaactgctattaagc 32391720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 12406159 - 12406040
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttt-ttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||| | ||||||||||||    
T  12406159 ccttggggggccaaaactgt-acagttgcaaaacttagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgggaaagttagggg 12406061  T
Q  544 gcgaaaactgctattaagcct 564  Q
    || ||||||||||||||||||    
T  12406060 gctaaaactgctattaagcct 12406040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 560
Target Start/End: Complemental strand, 3333810 - 3333695
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||| |||||||   ||||||||||||||  ||||||||||||||    
T  3333810 ccttggggggccaaaactgctacatttgcaaaacttagaggacggttttgtagtttttttcttaggggatcaaaatcgcaacttcatgaaagttaggggg 3333711  T
Q  545 cgaaaactgctattaa 560  Q
    ||||||||||||||||    
T  3333710 cgaaaactgctattaa 3333695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 448 - 565
Target Start/End: Original strand, 36798373 - 36798492
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||  |||||||  ||||||||||||||| | ||||||||||||||    
T  36798373 ttggggggccaaaactgctacagttgcaaaacttagggggcggttttgcagttttttttcttaggggaccaaaatcgcaactttgagaaagttagggggc 36798472  T
Q  546 gaaaactgctattaagcctt 565  Q
     |||||||||||||||||||    
T  36798473 taaaactgctattaagcctt 36798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 2974828 - 2974949
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttttt--ccttagggtgccaaaatcgcaacttagtgaaagttaggg 542  Q
    |||| ||||||||||||||| |||| ||||||||||||||| ||||| |||||||||||  |||| ||| |||||||||||||||| |||||||||||||    
T  2974828 ccttagggggccaaaactgctacaggtgcaaaacttagggggcggttctgtagttttttttccttggggggccaaaatcgcaacttcgtgaaagttaggg 2974927  T
Q  543 ggcgaaaactgctattaagcct 564  Q
    ||| ||||||||||||||||||    
T  2974928 ggcaaaaactgctattaagcct 2974949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 3999204 - 3999082
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||| |||||||||||||| ||||||||||||||||   | || |||||||||||||| ||||||| | |||||||||||||| |||||||||||||||    
T  3999204 ccttgaggggccaaaactgctacagttgcaaaacttataagtcgattttgtagtttttttcttagggggtcaaaatcgcaacttcgtgaaagttaggggg 3999105  T
Q  545 cgaaaactgctattaagccttta 567  Q
    |||||||||||||||| ||||||    
T  3999104 cgaaaactgctattaaaccttta 3999082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 454 - 566
Target Start/End: Original strand, 37897921 - 37898034
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttaggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| |  ||||||||||||| ||||||    
T  37897921 ggccaaaactgccacatatgcaaaacttaggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaact 37898020  T
Q  553 gctattaagccttt 566  Q
    ||||||||| ||||    
T  37898021 gctattaaggcttt 37898034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 35166488 - 35166608
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagtta-gggg 543  Q
    |||| ||||||||||||||| |||| |||||||||||||||  | |||||||||||||| |||||||  ||||||||||||||| |||||||||| ||||    
T  35166488 cctttgggggccaaaactgctacagctgcaaaacttagggggtgattttgtagtttttttcttaggggaccaaaatcgcaacttcgtgaaagttaggggg 35166587  T
Q  544 gcgaaaactgctattaagcct 564  Q
    |||||||||||||||||||||    
T  35166588 gcgaaaactgctattaagcct 35166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 451 - 562
Target Start/End: Complemental strand, 39574350 - 39574240
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcgg-ttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||  |||||||||||||||  | |||| ||||||||| ||||||| |||||||||||||||| ||||||||||| ||||||||    
T  39574350 gggggccaaaactgccaca--tgcaaaacttagggggtgattttatagtttttttcttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaa 39574253  T
Q  550 actgctattaagc 562  Q
    |||||||||||||    
T  39574252 actgctattaagc 39574240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 448 - 568
Target Start/End: Original strand, 24405694 - 24405816
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||| |||||| | ||||||||||||||||| |||| |||||||||||||||  ||||||||||||||||||||| || ||||  ||||||| ||    
T  24405694 ttggggggctaaaactcctacagttgcaaaacttagtgggcagttttgtagttttttttcttagggtgccaaaatcgcaagttcgtgattgttagggtgc 24405793  T
Q  546 gaaaactgctattaagcctttat 568  Q
    | |||||||||||||||||||||    
T  24405794 ggaaactgctattaagcctttat 24405816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 448 - 565
Target Start/End: Original strand, 20512396 - 20512515
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||||||||||||||||| | ||||||||||||||| ||||| ||||||| ||||||   ||||||| |||||||||||||||| |||||||||| | ||    
T  20512396 ttggggggccaaaactgctaaagttgcaaaacttagagggcgattttgtaatttttttttcttaggg-gccaaaatcgcaacttcgtgaaagttaagagg 20512494  T
Q  545 cgaaaactgctattaagcctt 565  Q
    |||||||||||||||||||||    
T  20512495 cgaaaactgctattaagcctt 20512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 451 - 572
Target Start/End: Complemental strand, 36798285 - 36798161
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||||||||||   ||||||| |||||||| ||||||| |  ||||||| ||| | |    
T  36798285 gggggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaattgcaactttggaaaagttaagggtcta 36798186  T
Q  548 aaactgctattaagcctttatttaa 572  Q
    |||||||||||||||||||||||||    
T  36798185 aaactgctattaagcctttatttaa 36798161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 451 - 573
Target Start/End: Original strand, 3333901 - 3334025
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttt-tccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||  ||||||||||| || ||||||||||||||||| | ||||||| |||||||||||||||| |  ||||||||||||| ||    
T  3333901 gggggccaaaactgccacatatgcaaaacttatggagcggttttgtagtttttcttcttagggggccaaaatcgcaactttggaaaagttagggggctaa 3334000  T
Q  549 aactgctattaagcctttatttaaa 573  Q
    |||| |||||||||| || ||||||    
T  3334001 aactactattaagccattttttaaa 3334025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 40276137 - 40276014
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgt-agttttttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||||| |||||||||||||||||||| || |||||| | |||||| ||||| | || |||||||||||||   ||||||||||||    
T  40276137 ccttggggggccaaaactgctacagttgcaaaacttaggggacgattttgtaattttttttcttagagggctaaaatcgcaacttcacgaaagttagggg 40276038  T
Q  544 gcgaaaactgctattaagccttta 567  Q
     ||||||||| |||||||||||||    
T  40276037 ccgaaaactgatattaagccttta 40276014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 6130373 - 6130253
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||||||||| |||||| |||| || ||||| || ||||||| ||||| |||||||     
T  6130373 ccttggggggccaaaactgctacagttgcaaaacttaggggatggttttgtagttttttttcttatgg-gccaacattgcaacttcgtgaatgttaggga 6130275  T
Q  544 gcgaaaactgctattaagcctt 565  Q
    ||||||| ||||||||||||||    
T  6130274 gcgaaaattgctattaagcctt 6130253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 562
Target Start/End: Original strand, 22300807 - 22300921
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||| ||||||||||||| ||||||||||||||||||||  |||| |||||||||| |||||||  ||||||||||||||  ||| || |||||||||    
T  22300807 ccttggagggccaaaactgctacagttgcaaaacttaggggtcgtttcgtagtttttt-cttaggg-accaaaatcgcaactacgtgcaaattagggggc 22300904  T
Q  546 gaaaactgctattaagc 562  Q
    |||||||| ||||||||    
T  22300905 gaaaactgttattaagc 22300921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 561
Target Start/End: Original strand, 25910917 - 25911037
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-----ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttag 540  Q
    |||| ||| ||||||||||| |||||||||||| |||     ||||| ||||||||||||||| ||||| | || |||||| |||||| |||||||||||    
T  25910917 ccttagggagccaaaactgctacagttgcaaaatttaattagggggcagttttgtagtttttttcttagagggctaaaatctcaacttcgtgaaagttag 25911016  T
Q  541 ggggcgaaaactgctattaag 561  Q
    |||||||||||||||||||||    
T  25911017 ggggcgaaaactgctattaag 25911037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 451 - 564
Target Start/End: Original strand, 27904683 - 27904798
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||| |||||||||||||  ||||||||||||||| |||||||||||||||||  |||| || |||||||||||||||| |  |||||||| |||| ||    
T  27904683 gggggacaaaactgccacaagtgcaaaacttagggggcggttttgtagttttttttcttacggggccaaaatcgcaactttgaaaaagttagagggctaa 27904782  T
Q  549 aactgctattaagcct 564  Q
    ||||||||||||||||    
T  27904783 aactgctattaagcct 27904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 451 - 562
Target Start/End: Original strand, 43098227 - 43098337
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||  |||||| || ||||||| ||||| |  ||||||||||| | ||||    
T  43098227 gggggccaaaactgctacaggtgcaaaacttaggcgcggttttgtagtttttt-tttagggggcaaaaatcgtaactttgaaaaagttaggggactaaaa 43098325  T
Q  551 ctgctattaagc 562  Q
    ||||||||||||    
T  43098326 ctgctattaagc 43098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 566
Target Start/End: Original strand, 18403186 - 18403306
Alignment:
Q  446 ccttggggggcca-aaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||||| ||| ||||| | || |||||||||||||||||| ||| | |||  |||| ||||||| ||||||||||||||| | ||||||||||| ||    
T  18403186 ccttgggggaccagaaacttctacggttgcaaaacttaggggcagttatataggctttttcttagggggccaaaatcgcaactca-tgaaagttaggtgg 18403284  T
Q  545 cgaaaactgctattaagccttt 566  Q
    ||||||||||||||||||||||    
T  18403285 cgaaaactgctattaagccttt 18403306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 447 - 565
Target Start/End: Complemental strand, 19340878 - 19340762
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    ||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||   |||||| | ||||||||||| || |  |||||||||||||    
T  19340878 cttggggggccaaaactgctacagttgcaaaacttagggggcgattttgtaattttt---ttagggggtcaaaatcgcaattttggaaaagttagggggc 19340782  T
Q  546 gaaaactgctattaagcctt 565  Q
     |||||||||||||| ||||    
T  19340781 taaaactgctattaaacctt 19340762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 447 - 566
Target Start/End: Complemental strand, 43098146 - 43098025
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||| || |||||||| |||||||||||||| ||| |||||||||||||||||||  |||| ||   |||||||||||||| || |||||||||||     
T  43098146 cttggggagcaaaaactgctacagttgcaaaactaaggaggcggttttgtagttttttttcttacgggatcaaaatcgcaacttcgtaaaagttagggga 43098047  T
Q  545 cgaaaactgctattaagccttt 566  Q
    |||||||||||||||| |||||    
T  43098046 cgaaaactgctattaaaccttt 43098025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 28446204 - 28446315
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttt-tccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||| | |||||||  |||||||| ||| || || ||| ||||||| ||||    
T  28446204 gggggccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttattcttaggggaccaaaatcacaatttcgtaaaaattaggggacgaa 28446303  T
Q  549 aactgctattaa 560  Q
    ||||| ||||||    
T  28446304 aactgttattaa 28446315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 451 - 565
Target Start/End: Original strand, 12406240 - 12406356
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||||||||| || |||||||||||| ||||||||| |||||||   ||||||| ||||||||| |||||| |  ||||||||||||| |    
T  12406240 gggggccaaaactgccacagatgtaaaacttagggggcggttttgttgtttttttttcttaggg-gccaaaatctcaactttgaaaaagttagggggcta 12406338  T
Q  548 aaactgctattaagcctt 565  Q
    ||| ||||||||||||||    
T  12406339 aaattgctattaagcctt 12406356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 31080590 - 31080480
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||||||||||||  |||||  | |||||||||||||| |  |||||||| |||| |||    
T  31080590 gggggccaaaactgccacagatgcaaaacttagggggtggttttgtagttttttttttaggaggtcaaaatcgcaactttggaaaagttagagggctaaa 31080491  T
Q  550 actgctattaa 560  Q
    |||| ||||||    
T  31080490 actgatattaa 31080480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 452 - 572
Target Start/End: Original strand, 19131701 - 19131821
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||  |||||| || |||||||||||||    |||||||| || | ||||    
T  19131701 ggggccaaaactgtcacagatgcaaaacttagggggcggttttgtagtttttt-tttagggggcaaaaatcgcaactttagaaaagttagaggactaaaa 19131799  T
Q  551 ctgctattaagcctttatttaa 572  Q
    |||||||||| |||| ||||||    
T  19131800 ctgctattaaaccttaatttaa 19131821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 457 - 565
Target Start/End: Complemental strand, 22300708 - 22300599
Alignment:
Q  457 caaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgct 555  Q
    |||||||||||||  | ||||||||| ||| |||||||||||||||||  |||||||||||||||||||||||    |||||||| |||| |||||| ||    
T  22300708 caaaactgccacatatacaaaacttaagggacggttttgtagttttttttttagggtgccaaaatcgcaactttagaaaagttagagggctaaaactact 22300609  T
Q  556 attaagcctt 565  Q
    ||||||||||    
T  22300608 attaagcctt 22300599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 467 - 562
Target Start/End: Original strand, 35877496 - 35877592
Alignment:
Q  467 acagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagc 562  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||| | |||||| ||||| | ||||||||||||||| |||||||||||||||||    
T  35877496 acagttgcaaaacttagggggcggttttgtagttttttttcttaggg-gtcaaaattgcaacctcgtgaaagttagggggtgaaaactgctattaagc 35877592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 451 - 566
Target Start/End: Original strand, 16132929 - 16133047
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtt--ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    ||||||||||||||| ||||| |||||| ||||||| |  ||||||||||  |||| ||||||| || ||||||||||||| ||||||||| || |||||    
T  16132929 gggggccaaaactgctacagtggcaaaatttagggggcaattttgtagttcttttttcttagggggctaaaatcgcaacttcgtgaaagttgggaggcga 16133028  T
Q  548 aaactgctattaagccttt 566  Q
    ||||  |||||||||||||    
T  16133029 aaaccactattaagccttt 16133047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 446 - 560
Target Start/End: Original strand, 25364022 - 25364136
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||||| |||||||||  ||  ||||||| |||||||| |||||||||||||| ||  |||||| |||||||| ||||||| ||||||||||| |||    
T  25364022 ccttgggggaccaaaactgatactattgcaaatcttagggggcggttttgtagtttcttt-ttagggggccaaaattgcaacttcgtgaaagttagaggg 25364120  T
Q  545 cgaaaactgctattaa 560  Q
     |||||||||||||||    
T  25364121 tgaaaactgctattaa 25364136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 451 - 566
Target Start/End: Original strand, 40276229 - 40276347
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    ||||| ||||| |||||||  ||||||||||||||| |||||||||||||||||   ||||||| |  |||||||||| || | |||||||||||||  |    
T  40276229 gggggtcaaaattgccacatatgcaaaacttaggggacggttttgtagtttttttttcttagggggttaaaatcgcaaatttgggaaagttagggggata 40276328  T
Q  548 aaactgctattaagccttt 566  Q
    |||||||||||||||||||    
T  40276329 aaactgctattaagccttt 40276347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 458 - 563
Target Start/End: Original strand, 6131740 - 6131849
Alignment:
Q  458 aaaactgccacagttgcaaaacttagggg-----cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||||| |||||||||||||||     || |||||||||||||| ||||||| ||||||||||||||||   ||||||||||  || ||||||    
T  6131740 aaaactgccacagatgcaaaacttagggggcgcacgattttgtagtttttttcttaggg-gccaaaatcgcaactttaggaaagttaggtagctaaaact 6131838  T
Q  553 gctattaagcc 563  Q
    |||||||||||    
T  6131839 gctattaagcc 6131849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 452 - 560
Target Start/End: Complemental strand, 24405603 - 24405493
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||||| || ||||||||||||  |||||||||||||||||||  || |||| | |||||||||||||| |  ||||||||||| | |||    
T  24405603 ggggccaaaactgccaaagatgcaaaacttagttggcggttttgtagttttttttctcagggagtcaaaatcgcaactttgaaaaagttaggggactaaa 24405504  T
Q  550 actgctattaa 560  Q
    |||||||||||    
T  24405503 actgctattaa 24405493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 20629851 - 20629739
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcg-gttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||| |||||||||  |||||| |||||||||||||   |||||||||||||||   ||||||| |  ||||||||||||| |||||||||| |||||||    
T  20629851 ggggaccaaaactgttacagtttcaaaacttagggggttgttttgtagtttttttttcttagggggttaaaatcgcaactttgtgaaagttaaggggcga 20629752  T
Q  548 aaactgctattaa 560  Q
    |||||||||||||    
T  20629751 aaactgctattaa 20629739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 30604293 - 30604399
Alignment:
Q  457 caaaactgccacagttgcaaaactta-ggggcggttttgtagt--tttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactg 553  Q
    |||||||||||||| ||||||||||| ||||||||||||||||  ||||| ||||||| || ||||||||||||| | |||| ||||| |||  ||||||    
T  30604293 caaaactgccacaggtgcaaaacttagggggcggttttgtagtaattttttcttaggg-gctaaaatcgcaactttgagaaaattaggtggctgaaactg 30604391  T
Q  554 ctattaag 561  Q
    ||||||||    
T  30604392 ctattaag 30604399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 483 - 564
Target Start/End: Original strand, 6464308 - 6464390
Alignment:
Q  483 ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||||||| |||  |||||| ||||||||||||||||  |||||  |||||||| ||||||||||||||||||    
T  6464308 ggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcct 6464390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 454 - 561
Target Start/End: Original strand, 20629947 - 20630057
Alignment:
Q  454 ggccaaaactgccacagttgcaaaactta-ggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggg-ggcgaaaa 550  Q
    |||||||||| |||||  ||||||||||| ||||||||||||||| |||||| |||| || ||||||||| |||||| |  |||||||||| ||| ||||    
T  20629947 ggccaaaacttccacaaatgcaaaacttagggggcggttttgtagttttttttcttaaggggccaaaatcacaactttggaaaagttagggaggctaaaa 20630046  T
Q  551 ctgctattaag 561  Q
    |||||||||||    
T  20630047 ctgctattaag 20630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 454 - 567
Target Start/End: Complemental strand, 35166406 - 35166293
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||| ||||||  ||||||||||||||| || |||||||||||||| ||||||| | ||||||||||| || |  |||||||   ||| ||||||    
T  35166406 ggccaaaaccgccacatgtgcaaaacttagggggcgattttgtagtttttttcttagggggtcaaaatcgcaattttggaaaagtta-aaggctaaaact 35166308  T
Q  553 gctattaagccttta 567  Q
    |||||||||||||||    
T  35166307 gctattaagccttta 35166293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 25910837 - 25910720
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtt----ttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||||||||||||||| ||||||| |||| ||| ||||||||||||    |||| ||||||| ||||||||| ||||||   |||||||||||||     
T  25910837 gggggccaaaactgccacaggtgcaaaatttagagggtggttttgtagtttttgtttttcttagggggccaaaatcacaactttaagaaagttaggggg- 25910739  T
Q  546 gaaaactgctattaagcct 564  Q
     ||||||| ||||||||||    
T  25910738 taaaactgttattaagcct 25910720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 457 - 563
Target Start/End: Original strand, 32391925 - 32392033
Alignment:
Q  457 caaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgc 554  Q
    |||||||| ||||  ||||||||||| |||||||||||||||||||||  ||||||| || ||||||||||||| |  |||||||||| |  ||||| ||    
T  32391925 caaaactgtcacacatgcaaaacttaaggggcggttttgtagttttttttcttagggggctaaaatcgcaactttgaaaaagttagggagttaaaacagc 32392024  T
Q  555 tattaagcc 563  Q
    |||||||||    
T  32392025 tattaagcc 32392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 21066535 - 21066593
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||    
T  21066535 ccttggggggccaaaactgctacagttgcaaaacttaaggagcggttttgtaatttttt 21066593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 451 - 528
Target Start/End: Complemental strand, 26702549 - 26702474
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    |||||||||||||||||||  |||||||||| |||||||||||||| ||||||  |||||  |||||||||| |||||    
T  26702549 gggggccaaaactgccacaaatgcaaaacttgggggcggttttgtaatttttt--ttaggaggccaaaatcgtaactt 26702474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 451 - 528
Target Start/End: Complemental strand, 26972282 - 26972207
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttccttagggtgccaaaatcgcaactt 528  Q
    |||||||||||||||||||  |||||||||| |||||||||||||| ||||||  |||||  |||||||||| |||||    
T  26972282 gggggccaaaactgccacaaatgcaaaacttgggggcggttttgtaatttttt--ttaggaggccaaaatcgtaactt 26972207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 30603731 - 30603673
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||||||||||||||||| |||||||||||||||| ||||| |||||||| ||||||    
T  30603731 ccttggggggccaaaactgctacagttgcaaaacttagggggcagttttgtaatttttt 30603673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 564
Target Start/End: Complemental strand, 34320040 - 34319959
Alignment:
Q  483 ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||||   |||||||| ||||||||||||||||||| ||||    
T  34320040 ggggtggttttgtagttttttttcttagggggccaaaatcgcaacttcaagaaagtta-ggggcgaaaactgctattatgcct 34319959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 452 - 560
Target Start/End: Complemental strand, 8284266 - 8284158
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||| |||||||||||||| ||||||||||||| || ||| ||||||||||||  |||||  |||||||||||||||| |  ||||||| ||||  ||||    
T  8284266 gggggcaaaactgccacagatgcaaaacttaggaggtggtattgtagtttttt-tttaggaggccaaaatcgcaactttggaaaagttatggggttaaaa 8284168  T
Q  551 ctgctattaa 560  Q
     |||||||||    
T  8284167 ttgctattaa 8284158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 455 - 511
Target Start/End: Complemental strand, 9852896 - 9852839
Alignment:
Q  455 gccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttaggg 511  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||    
T  9852896 gccaaaactgccacagatgcaaaacttagggggcgattttgtagtttttttcttaggg 9852839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 39574435 - 39574491
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    |||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  39574435 ttggggtgccaaaactgccacagttgcaaaacttatggggtggtcttgtagtttttt 39574491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 563
Target Start/End: Complemental strand, 25363938 - 25363825
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgta--gttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||| ||||| |||||||||||||||| | ||||||||   |||||| ||||||  ||||||||| ||||||    ||||||| ||||| ||    
T  25363938 ggggccaaaactaccacaattgcaaaacttaggggacagttttgtaacttttttttcttaggaggccaaaatcacaactttaaaaaagtta-ggggctaa 25363840  T
Q  549 aactgctattaagcc 563  Q
    |||||||||||||||    
T  25363839 aactgctattaagcc 25363825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 564
Target Start/End: Complemental strand, 26563102 - 26562989
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||| |||||||| ||||||| || | ||| |||||||||||||||  ||||||   |||||||| |||||| |  |||||||| || | |||    
T  26563102 gggggccaaaattgccacagatgcaaaaatt-gaggcagttttgtagttttttttcttaggacaccaaaatcacaactttggaaaagttagcggactaaa 26563004  T
Q  550 actgctattaagcct 564  Q
    |||||||||||||||    
T  26563003 actgctattaagcct 26562989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 495
Target Start/End: Complemental strand, 2974747 - 2974702
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgt 495  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  2974747 gggggccaaaactgccacagatgcaaaacttagggggcggttttgt 2974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 9852985 - 9853038
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    ||||||||||||||  |||||||||||||||| |||||||||| ||||||||||    
T  9852985 gggggccaaaactgatacagttgcaaaacttagggggcggtttagtagtttttt 9853038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 31080686 - 31080731
Alignment:
Q  457 caaaactgccacagttgcaaaacttag-gggcggttttgtagtttt 501  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  31080686 caaaactgctacagttgcaaaacttagagggcggttttgtagtttt 31080731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 528
Target Start/End: Complemental strand, 16132858 - 16132780
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttt-ttccttagggtgccaaaatcgcaactt 528  Q
    |||| |||||||||||| || ||||||||||| |||||||||||||| |||| || ||||| | ||||||||||||||||    
T  16132858 ggggaccaaaactgccataggtgcaaaacttagggggcggttttgtaattttatttcttagtg-gccaaaatcgcaactt 16132780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 564
Target Start/End: Original strand, 24779490 - 24779589
Alignment:
Q  467 acagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||| |||||||| ||  |||||||||| ||||||  |||| || ||||||||||||||    | ||||||||||| ||||||||||||||||||||    
T  24779490 acagttgtaaaacttatggaacggttttgtaatttttttacttaaggggccaaaatcgcaacagcataaaagttaggggacgaaaactgctattaagcct 24779589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Original strand, 40133143 - 40133190
Alignment:
Q  513 gccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 560  Q
    |||||||||||||||| | |||||||||||||| |||| |||||||||    
T  40133143 gccaaaatcgcaactttgggaaagttagggggctaaaattgctattaa 40133190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 483 - 564
Target Start/End: Complemental strand, 20126519 - 20126437
Alignment:
Q  483 ggggcggttttgtagttt-tttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||||||| |||  |||||| | ||||||| ||||||  |||||  |||||||| |||||| |||||||||||    
T  20126519 ggggcggttttgtagtttatttagttagggggtcaaaatcacaacttcttgaaacatagggggccaaaactcctattaagcct 20126437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 451 - 504
Target Start/End: Complemental strand, 37897831 - 37897777
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc 504  Q
    |||||||||||| || ||| |||||||||||| |||||||||||||| |||||||    
T  37897831 gggggccaaaacagctacaattgcaaaacttagggggcggttttgtaattttttc 37897777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 564
Target Start/End: Complemental strand, 42586043 - 42585985
Alignment:
Q  506 ttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||| | ||||||||||||||  |||||  |||||||| ||||||||||||||||||    
T  42586043 ttagggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcct 42585985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 543
Target Start/End: Original strand, 26702646 - 26702707
Alignment:
Q  483 ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||| |||||||||||||||  |||| || |||||||||||||||| || |||||||||||    
T  26702646 ggggcagttttgtagttttttttcttaaggagccaaaatcgcaacttcgtaaaagttagggg 26702707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 543
Target Start/End: Original strand, 26972379 - 26972440
Alignment:
Q  483 ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||| |||||||||||||||  |||| || |||||||||||||||| || |||||||||||    
T  26972379 ggggcagttttgtagttttttttcttaaggagccaaaatcgcaacttcgtaaaagttagggg 26972440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 68; Significance: 6e-30; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 19158 - 19039
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||| ||||||| |||| || ||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||| |||||| |||||||||| ||||    
T  19158 ccttgggaggccaaatctgctacggttgcaaaacttaggggacggttttgtagtttttttcttagggagccgaaatcacaacttcgtgaaagttaagggg 19059  T
Q  545 cgaaaactgctattaagcct 564  Q
    |||||||| |||||||||||    
T  19058 cgaaaactactattaagcct 19039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 19229 - 19282
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagtttttt 503  Q
    ||||||||||||| |||||  ||||||||||| |||||||||||||||||||||    
T  19229 gggggccaaaactaccacatgtgcaaaacttagggggcggttttgtagtttttt 19282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 560
Target Start/End: Original strand, 19589 - 19652
Alignment:
Q  498 ttttttcctta-gggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 560  Q
    ||||||||||| ||| |||||||||||||||| |  ||||||||||| | ||||||||||||||    
T  19589 ttttttccttaagggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 9525 - 9415
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||||||||||||| ||||| | || |||||| |||||| | |||| ||||||||| |||    
T  9525 gggggctaaaactgccacatatgcaaaacttaggggacggttttgtagtttttttcttagagggcaaaaatcacaactttgggaaaattagggggctaaa 9426  T
Q  550 actgctattaa 560  Q
    |||||||||||    
T  9425 actgctattaa 9415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 446 - 564
Target Start/End: Original strand, 9616 - 9731
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    |||| |||| ||| ||| || |||||||||||||||| |||||||||||||||||||||  ||| || |||| |||| |||||| ||||||||||  |||    
T  9616 ccttcggggaccagaaccgctacagttgcaaaacttaaggggcggttttgtagtttttt--ttatggggccagaatcacaacttcgtgaaagtta--ggg 9711  T
Q  545 cgaaaactgctattaagcct 564  Q
    ||||||| ||||||||||||    
T  9712 cgaaaacggctattaagcct 9731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 570
Target Start/End: Original strand, 9534 - 9658
Alignment:
Q  449 tggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggc 545  Q
    |||||||| |||||||| |||||||||||||||||||| || ||| ||||||||||   |||||||   |||||||||||||| |||||||||||| ||     
T  9534 tggggggctaaaactgctacagttgcaaaacttagggggcgatttggtagtttttttttcttaggggatcaaaatcgcaacttcgtgaaagttaggaggt 9633  T
Q  546 gaaaactgctattaagcctttattt 570  Q
    ||||||||||||||| ||| |||||    
T  9634 gaaaactgctattaaacctatattt 9658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 447 - 562
Target Start/End: Original strand, 605 - 723
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggg 543  Q
    ||||||||||  ||||||| | | |||||||||||| |||||||||||||||||||||   ||||||| |||||||||||||||| || ||||||||| |    
T  605 cttggggggcataaactgctagaattgcaaaacttaaggggcggttttgtagtttttttttcttagggggccaaaatcgcaacttcgtaaaagttaggag 704  T
Q  544 gcgaaaactgctattaagc 562  Q
     ||||||||||||| ||||    
T  705 acgaaaactgctatgaagc 723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 517 - 405
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggc-ggttttgtagttttttc--cttagggtgccaaaatcgcaacttagtgaaagttagggggcga 547  Q
    |||||||||||||||||||  || ||||||||||||  ||||||||||||||||   ||||||| |||||||||||||||| | | |||||||||||| |    
T  517 gggggccaaaactgccacatatgtaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatcgcaactttgaggaagttagggggcta 418  T
Q  548 aaactgctattaa 560  Q
    || ||||||||||    
T  417 aagctgctattaa 405  T

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Target: scaffold0372 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 454 - 565
Target Start/End: Complemental strand, 234 - 122
Alignment:
Q  454 ggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaact 552  Q
    ||||||||||||||||  ||||||| ||||| | || |||||||||||||  || |||| || ||||||||||||| | |||||||||| ||| ||||||    
T  234 ggccaaaactgccacaagtgcaaaatttaggagacgtttttgtagtttttatctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaact 135  T
Q  553 gctattaagcctt 565  Q
    |||||||||||||    
T  134 gctattaagcctt 122  T

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Target: scaffold0372; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 447 - 540
Target Start/End: Original strand, 308 - 401
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttag 540  Q
    |||||||||||||| |||| ||||||| |||||||||||  ||||||| ||||||||| ||||||| ||||||| |||||||| | |||||||||    
T  308 cttggggggccaaagctgctacagttgtaaaacttagggaacggttttatagtttttt-cttagggggccaaaagcgcaactttgggaaagttag 401  T

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Target: scaffold1458 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 1545 - 1470
Alignment:
Q  490 ttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||||||||||  ||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  1545 ttttgtagttttttttcttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagcct 1470  T

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Target: scaffold0515 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 3713 - 3638
Alignment:
Q  490 ttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||||||||||  ||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||||||    
T  3713 ttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

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Target: scaffold0306 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 3713 - 3638
Alignment:
Q  490 ttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||||||||||  ||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||||||    
T  3713 ttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

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Target: scaffold0011 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 145467 - 145364
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactta-ggggcggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||  ||||||| | |||||||||||||| | |||||||||||| | ||    
T  145467 gggggccaaaactgccacagatgcaaaatttaaggggcggctttgtagttttttttcttaggggggcaaaatcgcaactttgagaaagttaggggactaa 145368  T
Q  549 aact 552  Q
    ||||    
T  145367 aact 145364  T

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Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 519
Target Start/End: Original strand, 145550 - 145623
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagttttttccttagggtgccaaaa 519  Q
    |||| ||||| ||||||||| ||| ||||||||||||||| || ||||||||||||||| ||||||| |||||||    
T  145550 ccttagggggacaaaactgctacaattgcaaaacttagggagcagttttgtagtttttt-cttagggggccaaaa 145623  T

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Target: scaffold0809 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 452 - 560
Target Start/End: Original strand, 2961 - 3068
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||| ||||  |||||||||||  |||| ||||| ||||||||| ||||||||  |||||||||||||| | |||||||||||  | ||||    
T  2961 ggggccaaaactgtcacatatgcaaaacttaaagggcagttttttagtttttttcttagggt--caaaatcgcaactttgagaaagttagggaactaaaa 3058  T
Q  551 ctgctattaa 560  Q
    ||||||||||    
T  3059 ctgctattaa 3068  T

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Target: scaffold0809; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 447 - 564
Target Start/End: Complemental strand, 2870 - 2751
Alignment:
Q  447 cttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttaggggg 544  Q
    ||||||| ||||||||||| ||||||| |||| ||| ||||| ||||||||| |||||| ||||| |  | ||||||| || || || |||||||||| |    
T  2870 cttggggagccaaaactgctacagttgtaaaatttagggggcagttttgtagttttttttcttagagaactaaaatcgtaaattcgtaaaagttagggtg 2771  T
Q  545 cgaaaactgctattaagcct 564  Q
    ||||||||| ||||||||||    
T  2770 cgaaaactgttattaagcct 2751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 9664 - 9558
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaactt-aggggcggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    ||||||||||||| | ||||||||||||||| ||||||| ||||||||||||    |||||| ||||||||| |||||| |  ||||||| ||||| |||    
T  9664 gggggccaaaactactacagttgcaaaacttaaggggcgattttgtagtttt----ttagggggccaaaatcacaactttggaaaagttaaggggctaaa 9569  T
Q  550 actgctattaa 560  Q
    ||| |||||||    
T  9568 actactattaa 9558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 562
Target Start/End: Complemental strand, 20027 - 19915
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttag-gggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaa 548  Q
    |||||||||||||||||||| |||||||||||| || || |||||||| |||||| ||||||| ||||||||| ||||||    ||| ||||||||  ||    
T  20027 gggggccaaaactgccacagatgcaaaacttagtggacgattttgtagttttttttcttaggg-gccaaaatcacaactttaaaaaatttagggggttaa 19929  T
Q  549 aactgctattaagc 562  Q
    ||||||||||||||    
T  19928 aactgctattaagc 19915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 550
Target Start/End: Original strand, 20121 - 20219
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    |||||||||||| | ||| |||||||| ||||||| || ||||||||||||||  |||||   |||||||| |||||| || ||| ||||||||||||||    
T  20121 ggggccaaaactactacaattgcaaaatttaggggacgattttgtagttttttt-ttaggtgaccaaaatcacaacttcgtaaaaattagggggcgaaaa 20219  T

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Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 453 - 564
Target Start/End: Original strand, 77063 - 77176
Alignment:
Q  453 gggccaaaactgccacagttgcaaaacttagggg-cggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaa 550  Q
    ||||||||||||| ||||||| |||||||||||| || |||||||| |||||| ||||||| ||||||| ||||||||    ||||||||| ||  ||||    
T  77063 gggccaaaactgctacagttgtaaaacttaggggacgattttgtagttttttttcttagggggccaaaaccgcaactttaaaaaagttaggcggttaaaa 77162  T
Q  551 ctgctattaagcct 564  Q
    || |||||||||||    
T  77163 ctactattaagcct 77176  T

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Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 452 - 512
Target Start/End: Complemental strand, 76975 - 76913
Alignment:
Q  452 ggggccaaaactgccacagttgcaaaactta-ggggcggttttgtag-ttttttccttagggt 512  Q
    |||| |||||||||||||  ||||||||||| ||||||| ||||||| |||||||||||||||    
T  76975 gggggcaaaactgccacaaatgcaaaacttagggggcggctttgtagtttttttccttagggt 76913  T

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Target: scaffold0250 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 562
Target Start/End: Complemental strand, 3680 - 3573
Alignment:
Q  458 aaaactgccacagttgcaaaacttagggg-cggttttgtagttttttccttagggt--gccaaaatcgcaacttagtgaaagttagggggcgaaaactgc 554  Q
    |||||||| |||||||| ||| ||||||| ||||||| |||||||||  ||   ||  |||||||||| ||||| |||||||||||  ||||||||||||    
T  3680 aaaactgctacagttgcgaaatttaggggacggttttatagttttttttttctagtaggccaaaatcgtaactttgtgaaagttagaaggcgaaaactgc 3581  T
Q  555 tattaagc 562  Q
    ||||||||    
T  3580 tattaagc 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 448 - 528
Target Start/End: Original strand, 93999 - 94081
Alignment:
Q  448 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaactt 528  Q
    |||| ||||| ||||||| |||||| ||||||||| ||| |||||||||||||||||  ||||||| | ||||||||||||||    
T  93999 ttggagggcctaaactgctacagttacaaaacttatgggacggttttgtagttttttttcttagggggtcaaaatcgcaactt 94081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 93929 - 93882
Alignment:
Q  457 caaaactgccacagttgcaaaacttagggg-cggttttgtagtttttt 503  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||    
T  93929 caaaactgccacatatgcaaaacttaggggacggttttgtagtttttt 93882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 203307 - 203249
Alignment:
Q  446 ccttggggggccaaaactgccacagttgcaaaacttagg-ggcggttttgtagtttttt 503  Q
    |||||| ||||||||||| | |||||||||||| ||||| |||||||||||||||||||    
T  203307 ccttggagggccaaaacttctacagttgcaaaatttaggaggcggttttgtagtttttt 203249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 570
Target Start/End: Original strand, 203376 - 203494
Alignment:
Q  451 gggggccaaaactgccacagttgcaaaacttaggggcggttttgtag-ttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 549  Q
    |||||||||||||| ||||  ||||||||||||||| | |||||||  |||||| ||||||  |  |||||||||| || |||||||||| |||| ||||    
T  203376 gggggccaaaactgtcacaaatgcaaaacttaggggtgattttgtaaatttttttcttaggaggt-aaaatcgcaatttcgtgaaagtta-ggggagaaa 203473  T
Q  550 actgctattaagcctttattt 570  Q
    | ||||||||| || ||||||    
T  203474 attgctattaaaccattattt 203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 564
Target Start/End: Original strand, 6698 - 6746
Alignment:
Q  516 aaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    |||||||||||||  ||||| ||||||||| ||||||||||||||||||    
T  6698 aaaatcgcaacttgttgaaacttagggggctaaaactgctattaagcct 6746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 500
Target Start/End: Original strand, 4220 - 4264
Alignment:
Q  457 caaaactgccacagttgcaaaactta-ggggcggttttgtagttt 500  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  4220 caaaactgctacagttgcaaaacttagggggcggttttgtagttt 4264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 564
Target Start/End: Original strand, 21873 - 21972
Alignment:
Q  467 acagttgcaaaacttagggg-cggttttgtagttttttc-cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 564  Q
    ||||||| |||||||| ||  |||||||||| ||||||  |||| || ||||||||||||||    | ||||||||||| ||||||||||||||||||||    
T  21873 acagttgtaaaacttatggaacggttttgtaatttttttacttaaggggccaaaatcgcaacagcataaaagttaggggacgaaaactgctattaagcct 21972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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