View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5095_high_1 (Length: 266)

Name: NF5095_high_1
Description: NF5095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5095_high_1
NF5095_high_1
[»] chr7 (74 HSPs)
chr7 (13-237)||(39273038-39273262)
chr7 (26-230)||(1848103-1848307)
chr7 (38-237)||(3329544-3329745)
chr7 (28-247)||(2563820-2564040)
chr7 (13-232)||(8978868-8979088)
chr7 (14-247)||(8053926-8054155)
chr7 (13-247)||(16365707-16365942)
chr7 (14-233)||(20582275-20582491)
chr7 (113-249)||(13759823-13759959)
chr7 (28-227)||(16058910-16059099)
chr7 (26-249)||(3734596-3734819)
chr7 (14-226)||(11803103-11803304)
chr7 (38-247)||(18368866-18369077)
chr7 (51-225)||(7492163-7492338)
chr7 (28-101)||(4785990-4786062)
chr7 (118-247)||(8054458-8054586)
chr7 (28-233)||(6042477-6042672)
chr7 (28-229)||(8877441-8877643)
chr7 (151-247)||(9864327-9864423)
chr7 (150-233)||(31492946-31493029)
chr7 (151-237)||(5530033-5530119)
chr7 (165-247)||(23099967-23100049)
chr7 (28-101)||(5108714-5108787)
chr7 (151-232)||(9916583-9916664)
chr7 (151-232)||(9924495-9924576)
chr7 (40-237)||(17077140-17077325)
chr7 (175-247)||(9574409-9574481)
chr7 (28-229)||(13418553-13418743)
chr7 (175-233)||(7318289-7318347)
chr7 (29-75)||(7397316-7397362)
chr7 (125-227)||(13277525-13277627)
chr7 (175-233)||(17153179-17153237)
chr7 (40-247)||(9731516-9731724)
chr7 (127-227)||(4449002-4449102)
chr7 (149-247)||(11221163-11221261)
chr7 (42-96)||(17153045-17153098)
chr7 (190-231)||(5797529-5797570)
chr7 (175-232)||(8313420-8313477)
chr7 (150-247)||(10587024-10587121)
chr7 (28-88)||(9131073-9131132)
chr7 (151-247)||(10584487-10584583)
chr7 (177-233)||(10937618-10937674)
chr7 (20-80)||(13289288-13289348)
chr7 (41-129)||(16297724-16297810)
chr7 (151-247)||(18495375-18495471)
chr7 (28-96)||(18662595-18662661)
chr7 (28-88)||(4819002-4819063)
chr7 (150-233)||(15869611-15869694)
chr7 (151-226)||(18467474-18467549)
chr7 (150-232)||(1584561-1584642)
chr7 (166-232)||(2350763-2350829)
chr7 (165-247)||(5108568-5108649)
chr7 (151-233)||(9245197-9245279)
chr7 (151-233)||(9261220-9261302)
chr7 (151-237)||(18449254-18449340)
chr7 (151-233)||(18662457-18662539)
chr7 (150-226)||(1872808-1872884)
chr7 (195-247)||(9890185-9890237)
chr7 (165-232)||(16297835-16297902)
chr7 (151-233)||(4579114-4579195)
chr7 (13-79)||(15869765-15869831)
chr7 (28-105)||(4449113-4449189)
chr7 (150-247)||(4986557-4986654)
chr7 (150-247)||(4990655-4990752)
chr7 (28-104)||(5797656-5797731)
chr7 (151-237)||(9130918-9131005)
chr7 (175-232)||(9500461-9500518)
chr7 (33-114)||(17191096-17191177)
chr7 (148-237)||(17203036-17203124)
chr7 (39-80)||(22067128-22067168)
chr7 (179-247)||(2453735-2453802)
chr7 (175-231)||(4785854-4785910)
chr7 (175-231)||(4818854-4818910)
chr7 (187-247)||(26134785-26134844)
[»] chr1 (51 HSPs)
chr1 (38-247)||(17610143-17610353)
chr1 (28-247)||(12208603-12208823)
chr1 (28-247)||(15543844-15544063)
chr1 (13-247)||(21449091-21449314)
chr1 (38-233)||(25405518-25405713)
chr1 (38-246)||(16179010-16179218)
chr1 (13-247)||(17359164-17359398)
chr1 (28-247)||(18736129-18736337)
chr1 (13-246)||(9401511-9401742)
chr1 (26-247)||(29242521-29242730)
chr1 (28-229)||(21666486-21666687)
chr1 (29-247)||(31235927-31236145)
chr1 (29-237)||(16069440-16069638)
chr1 (29-232)||(21987872-21988064)
chr1 (28-229)||(22622910-22623112)
chr1 (28-232)||(16916823-16917016)
chr1 (151-247)||(13345337-13345433)
chr1 (28-227)||(14781743-14781930)
chr1 (148-233)||(16787724-16787809)
chr1 (128-227)||(727489-727588)
chr1 (128-227)||(24054001-24054099)
chr1 (123-229)||(18825675-18825781)
chr1 (38-96)||(25403978-25404036)
chr1 (151-247)||(3591654-3591750)
chr1 (27-71)||(17121377-17121421)
chr1 (38-97)||(18529079-18529137)
chr1 (26-71)||(28008283-28008328)
chr1 (151-247)||(17837519-17837615)
chr1 (175-247)||(23038037-23038108)
chr1 (129-232)||(14779582-14779684)
chr1 (28-79)||(21334595-21334646)
chr1 (150-233)||(24214560-24214643)
chr1 (150-233)||(24281293-24281376)
chr1 (149-224)||(51473875-51473950)
chr1 (123-229)||(18830501-18830607)
chr1 (165-247)||(21847636-21847717)
chr1 (191-233)||(24306346-24306388)
chr1 (175-232)||(9787904-9787961)
chr1 (41-96)||(9787769-9787823)
chr1 (42-129)||(18100905-18100989)
chr1 (41-79)||(21973097-21973134)
chr1 (191-233)||(34480985-34481027)
chr1 (170-232)||(44795386-44795447)
chr1 (192-233)||(22664222-22664263)
chr1 (127-227)||(23179819-23179920)
chr1 (175-232)||(24267807-24267864)
chr1 (152-233)||(27117720-27117801)
chr1 (39-71)||(22664385-22664417)
chr1 (28-72)||(23179962-23180006)
chr1 (191-247)||(26540898-26540953)
chr1 (38-70)||(33190856-33190888)
[»] chr4 (45 HSPs)
chr4 (28-247)||(13908856-13909076)
chr4 (51-247)||(15164769-15164964)
chr4 (13-232)||(7582314-7582534)
chr4 (67-245)||(16730316-16730494)
chr4 (19-232)||(19562043-19562260)
chr4 (38-233)||(17216833-17217031)
chr4 (13-247)||(19492574-19492797)
chr4 (28-247)||(17709759-17709975)
chr4 (28-247)||(13692558-13692766)
chr4 (28-231)||(17337012-17337216)
chr4 (148-247)||(21323873-21323972)
chr4 (28-212)||(17026221-17026394)
chr4 (129-247)||(11490534-11490648)
chr4 (46-247)||(13128768-13128971)
chr4 (153-249)||(13992879-13992975)
chr4 (151-247)||(20315002-20315098)
chr4 (28-96)||(24639338-24639406)
chr4 (150-247)||(17672004-17672101)
chr4 (151-247)||(11700571-11700666)
chr4 (150-247)||(20829739-20829835)
chr4 (28-80)||(12406580-12406632)
chr4 (151-247)||(19882642-19882738)
chr4 (28-227)||(25097856-25098043)
chr4 (150-232)||(12578266-12578348)
chr4 (150-247)||(5679207-5679304)
chr4 (150-247)||(14648897-14648993)
chr4 (151-248)||(23080342-23080439)
chr4 (162-231)||(24639466-24639535)
chr4 (28-101)||(25121104-25121175)
chr4 (127-212)||(12406666-12406753)
chr4 (151-249)||(22357533-22357634)
chr4 (150-232)||(19929675-19929757)
chr4 (151-233)||(25121227-25121308)
chr4 (175-237)||(43941812-43941874)
chr4 (175-232)||(17275833-17275890)
chr4 (170-247)||(19092297-19092374)
chr4 (14-70)||(11935237-11935293)
chr4 (158-233)||(15047144-15047219)
chr4 (158-233)||(15107205-15107280)
chr4 (38-101)||(40227925-40227988)
chr4 (179-237)||(22218630-22218687)
chr4 (151-233)||(22526380-22526462)
chr4 (150-247)||(8969722-8969818)
chr4 (183-247)||(19900582-19900645)
chr4 (183-247)||(22175995-22176059)
[»] chr2 (40 HSPs)
chr2 (13-247)||(17743339-17743573)
chr2 (28-247)||(27908996-27909216)
chr2 (28-247)||(29719109-29719328)
chr2 (28-231)||(28925539-28925743)
chr2 (43-247)||(31804791-31804997)
chr2 (13-232)||(15339255-15339475)
chr2 (28-232)||(30411695-30411889)
chr2 (13-244)||(17349362-17349585)
chr2 (31-233)||(25196026-25196229)
chr2 (129-227)||(24090905-24091003)
chr2 (15-227)||(29142983-29143184)
chr2 (39-249)||(32085463-32085673)
chr2 (41-233)||(17635665-17635858)
chr2 (28-231)||(25618574-25618777)
chr2 (41-233)||(17675519-17675713)
chr2 (28-101)||(26603237-26603309)
chr2 (149-247)||(45621880-45621978)
chr2 (150-247)||(20174635-20174732)
chr2 (28-96)||(17198010-17198078)
chr2 (28-227)||(25535296-25535483)
chr2 (177-247)||(25888247-25888317)
chr2 (28-80)||(26667464-26667516)
chr2 (52-233)||(11382654-11382836)
chr2 (149-232)||(12953293-12953376)
chr2 (28-115)||(25530571-25530657)
chr2 (48-212)||(25920303-25920455)
chr2 (183-247)||(8447083-8447146)
chr2 (32-96)||(12953225-12953289)
chr2 (28-80)||(24090816-24090867)
chr2 (150-233)||(29027512-29027595)
chr2 (154-237)||(30900848-30900931)
chr2 (28-101)||(25887781-25887853)
chr2 (149-231)||(9774334-9774414)
chr2 (150-233)||(25885460-25885542)
chr2 (148-247)||(26603348-26603447)
chr2 (183-247)||(8503103-8503167)
chr2 (151-247)||(23011764-23011859)
chr2 (191-227)||(25530469-25530505)
chr2 (150-226)||(27418389-27418465)
chr2 (151-247)||(45553132-45553228)
[»] chr8 (34 HSPs)
chr8 (33-247)||(29382243-29382458)
chr8 (28-247)||(24114161-24114379)
chr8 (13-247)||(24269600-24269833)
chr8 (43-226)||(27659468-27659642)
chr8 (28-232)||(13314869-13315074)
chr8 (47-229)||(17509266-17509447)
chr8 (42-232)||(18448433-18448624)
chr8 (38-233)||(17101792-17101976)
chr8 (13-153)||(24110532-24110670)
chr8 (112-247)||(25226138-25226272)
chr8 (20-227)||(23893083-23893278)
chr8 (151-247)||(5850943-5851039)
chr8 (28-96)||(26394576-26394643)
chr8 (170-233)||(14528165-14528228)
chr8 (175-237)||(2637610-2637672)
chr8 (183-233)||(30783774-30783824)
chr8 (38-88)||(14626191-14626241)
chr8 (39-101)||(25182316-25182377)
chr8 (151-232)||(14075611-14075692)
chr8 (152-237)||(15238811-15238896)
chr8 (44-227)||(19264064-19264237)
chr8 (134-247)||(6884960-6885069)
chr8 (175-232)||(17976636-17976693)
chr8 (20-101)||(18569204-18569284)
chr8 (48-101)||(24644989-24645042)
chr8 (141-209)||(16403952-16404020)
chr8 (28-96)||(16404055-16404122)
chr8 (170-233)||(34497131-34497194)
chr8 (30-96)||(44010903-44010968)
chr8 (175-233)||(44011049-44011106)
chr8 (39-88)||(21314785-21314834)
chr8 (191-232)||(24110696-24110737)
chr8 (129-226)||(30806475-30806573)
chr8 (38-70)||(34497295-34497327)
[»] chr6 (55 HSPs)
chr6 (28-247)||(27737566-27737786)
chr6 (26-233)||(5624656-5624864)
chr6 (13-248)||(23844327-23844563)
chr6 (28-168)||(14636948-14637090)
chr6 (28-233)||(23231862-23232066)
chr6 (38-247)||(9516787-9516997)
chr6 (41-226)||(17826986-17827168)
chr6 (28-247)||(27124372-27124589)
chr6 (57-233)||(22410234-22410410)
chr6 (151-247)||(9726024-9726120)
chr6 (127-227)||(22413026-22413126)
chr6 (28-215)||(11135941-11136119)
chr6 (28-227)||(24657346-24657532)
chr6 (14-132)||(20005781-20005900)
chr6 (13-158)||(24475147-24475292)
chr6 (170-249)||(17729152-17729231)
chr6 (152-233)||(25927305-25927386)
chr6 (149-233)||(21672434-21672518)
chr6 (127-227)||(23009372-23009471)
chr6 (127-227)||(23778893-23778992)
chr6 (150-236)||(28933660-28933746)
chr6 (150-247)||(11176952-11177049)
chr6 (131-232)||(23143739-23143838)
chr6 (149-233)||(21679850-21679934)
chr6 (13-101)||(25781927-25782014)
chr6 (149-247)||(18075386-18075485)
chr6 (13-96)||(20144984-20145067)
chr6 (13-96)||(22187772-22187855)
chr6 (43-101)||(17382218-17382275)
chr6 (125-227)||(21841663-21841765)
chr6 (150-247)||(12183331-12183428)
chr6 (29-114)||(14079336-14079421)
chr6 (148-233)||(23645765-23645850)
chr6 (175-233)||(6630717-6630773)
chr6 (170-233)||(21907448-21907511)
chr6 (170-247)||(9898978-9899056)
chr6 (151-233)||(17299832-17299914)
chr6 (42-96)||(22813612-22813665)
chr6 (26-71)||(1635140-1635185)
chr6 (129-247)||(4339737-4339851)
chr6 (28-101)||(12183208-12183279)
chr6 (170-247)||(20005899-20005976)
chr6 (198-247)||(21932100-21932149)
chr6 (170-247)||(22567842-22567919)
chr6 (28-80)||(17883719-17883771)
chr6 (129-225)||(9838380-9838472)
chr6 (170-233)||(19244601-19244664)
chr6 (195-237)||(7543005-7543047)
chr6 (29-71)||(18075289-18075331)
chr6 (191-237)||(22566203-22566249)
chr6 (41-129)||(15466493-15466577)
chr6 (38-79)||(22566049-22566090)
chr6 (191-247)||(8241279-8241335)
chr6 (29-89)||(22412940-22412999)
chr6 (148-208)||(24252227-24252287)
[»] scaffold0638 (1 HSPs)
scaffold0638 (13-231)||(684-904)
[»] chr5 (34 HSPs)
chr5 (13-161)||(20744532-20744679)
chr5 (70-247)||(19004146-19004323)
chr5 (29-247)||(17431885-17432103)
chr5 (28-229)||(34128656-34128857)
chr5 (28-233)||(39434478-39434676)
chr5 (16-227)||(20563957-20564158)
chr5 (125-237)||(23388813-23388925)
chr5 (28-231)||(24245421-24245625)
chr5 (28-233)||(20315307-20315513)
chr5 (118-247)||(19051551-19051679)
chr5 (150-247)||(34487640-34487736)
chr5 (28-247)||(15375772-15375979)
chr5 (127-227)||(20858707-20858807)
chr5 (131-233)||(25550487-25550587)
chr5 (28-114)||(16523680-16523766)
chr5 (30-80)||(20549597-20549647)
chr5 (12-101)||(26835799-26835886)
chr5 (150-247)||(18208249-18208345)
chr5 (28-89)||(24140597-24140657)
chr5 (140-232)||(17315090-17315182)
chr5 (151-231)||(24852173-24852253)
chr5 (175-249)||(17171578-17171652)
chr5 (178-248)||(19086207-19086277)
chr5 (151-249)||(24167586-24167683)
chr5 (150-247)||(24266955-24267051)
chr5 (150-247)||(24343586-24343682)
chr5 (150-247)||(25402337-25402434)
chr5 (28-101)||(28664911-28664983)
chr5 (175-247)||(15469938-15470010)
chr5 (149-233)||(24140458-24140542)
chr5 (193-247)||(22755523-22755577)
chr5 (150-203)||(17635325-17635378)
chr5 (28-96)||(20858827-20858894)
chr5 (183-247)||(23380290-23380354)
[»] chr3 (50 HSPs)
chr3 (7-231)||(17438287-17438512)
chr3 (28-247)||(21301920-21302141)
chr3 (33-228)||(19925504-19925701)
chr3 (13-231)||(12411169-12411384)
chr3 (15-247)||(19908309-19908542)
chr3 (29-233)||(932758-932963)
chr3 (28-233)||(16245607-16245812)
chr3 (28-232)||(4650248-4650447)
chr3 (28-227)||(16229831-16230019)
chr3 (14-229)||(8770039-8770243)
chr3 (150-247)||(21325342-21325439)
chr3 (28-96)||(12754800-12754868)
chr3 (28-227)||(8169907-8170093)
chr3 (28-229)||(8765137-8765327)
chr3 (125-247)||(19171810-19171931)
chr3 (125-247)||(22349411-22349532)
chr3 (20-89)||(27413766-27413835)
chr3 (40-245)||(20429714-20429920)
chr3 (128-227)||(8889130-8889229)
chr3 (150-232)||(12805890-12805972)
chr3 (38-233)||(21303242-21303437)
chr3 (151-232)||(8557130-8557211)
chr3 (175-247)||(10917920-10917992)
chr3 (151-233)||(821515-821597)
chr3 (182-247)||(18458456-18458521)
chr3 (191-247)||(12759389-12759445)
chr3 (28-80)||(19909850-19909902)
chr3 (150-233)||(8319055-8319138)
chr3 (177-232)||(28728961-28729016)
chr3 (165-231)||(2167632-2167698)
chr3 (151-249)||(21825870-21825967)
chr3 (150-247)||(3116419-3116515)
chr3 (28-247)||(41508369-41508588)
chr3 (13-81)||(7494977-7495045)
chr3 (28-115)||(8883000-8883087)
chr3 (28-83)||(19171744-19171799)
chr3 (28-70)||(12805768-12805810)
chr3 (38-80)||(19576108-19576150)
chr3 (151-232)||(31286017-31286096)
chr3 (185-233)||(6289919-6289967)
chr3 (195-247)||(18736717-18736768)
chr3 (127-210)||(19909937-19910020)
chr3 (175-233)||(10744918-10744976)
chr3 (179-233)||(27542944-27542997)
chr3 (38-71)||(18736560-18736593)
chr3 (28-101)||(20023430-20023502)
chr3 (32-105)||(21325487-21325558)
chr3 (13-81)||(7478217-7478285)
chr3 (49-101)||(10745051-10745101)
chr3 (191-227)||(11518002-11518038)
[»] scaffold0035 (1 HSPs)
scaffold0035 (33-232)||(69930-70129)
[»] scaffold0155 (1 HSPs)
scaffold0155 (28-232)||(35871-36077)
[»] scaffold0016 (2 HSPs)
scaffold0016 (125-237)||(3543-3655)
scaffold0016 (183-247)||(12111-12175)
[»] scaffold0056 (2 HSPs)
scaffold0056 (28-179)||(25056-25196)
scaffold0056 (28-226)||(21299-21486)
[»] scaffold0671 (1 HSPs)
scaffold0671 (28-209)||(482-652)
[»] scaffold0263 (1 HSPs)
scaffold0263 (28-97)||(15800-15868)
[»] scaffold0054 (2 HSPs)
scaffold0054 (13-101)||(72159-72247)
scaffold0054 (196-249)||(72072-72125)
[»] scaffold0650 (1 HSPs)
scaffold0650 (151-233)||(6303-6385)
[»] scaffold0024 (2 HSPs)
scaffold0024 (178-247)||(39586-39655)
scaffold0024 (42-101)||(39735-39792)
[»] scaffold0019 (2 HSPs)
scaffold0019 (150-231)||(181706-181786)
scaffold0019 (151-247)||(11242-11338)
[»] scaffold0034 (1 HSPs)
scaffold0034 (28-227)||(76439-76626)
[»] scaffold0008 (3 HSPs)
scaffold0008 (125-228)||(234362-234465)
scaffold0008 (118-233)||(48162-48273)
scaffold0008 (150-247)||(54862-54960)
[»] scaffold1869 (1 HSPs)
scaffold1869 (28-233)||(266-472)
[»] scaffold0136 (1 HSPs)
scaffold0136 (183-232)||(15498-15547)
[»] scaffold0005 (1 HSPs)
scaffold0005 (150-247)||(168299-168395)
[»] scaffold0001 (1 HSPs)
scaffold0001 (29-126)||(69204-69301)
[»] scaffold0111 (1 HSPs)
scaffold0111 (28-83)||(3801-3856)
[»] scaffold0672 (1 HSPs)
scaffold0672 (191-249)||(1734-1792)
[»] scaffold0653 (1 HSPs)
scaffold0653 (151-233)||(4484-4566)
[»] scaffold0622 (1 HSPs)
scaffold0622 (170-247)||(730-807)
[»] scaffold0102 (1 HSPs)
scaffold0102 (28-233)||(35553-35759)
[»] scaffold0427 (1 HSPs)
scaffold0427 (150-214)||(2818-2882)
[»] scaffold0386 (2 HSPs)
scaffold0386 (28-80)||(6592-6644)
scaffold0386 (28-114)||(5982-6068)
[»] scaffold0838 (1 HSPs)
scaffold0838 (184-247)||(2372-2435)
[»] scaffold0832 (1 HSPs)
scaffold0832 (184-247)||(2403-2466)
[»] scaffold0957 (2 HSPs)
scaffold0957 (42-80)||(3314-3352)
scaffold0957 (191-247)||(3155-3210)
[»] scaffold0042 (1 HSPs)
scaffold0042 (149-247)||(29909-30006)
[»] scaffold0043 (1 HSPs)
scaffold0043 (39-71)||(89742-89774)
[»] scaffold0002 (1 HSPs)
scaffold0002 (39-79)||(114659-114699)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 39273038 - 39273262
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||    
T  39273038 aatataaacagaggagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaaatagattaaatttgcaa 39273137  T
Q  113 ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || || |||||||| ||||||||    
T  39273138 ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttggacgaaacgacaatccatatgaatacgatactctactta 39273237  T
Q  213 ttactttattacttggtaaacaatt 237  Q
    | |||||||||||| ||||||||||    
T  39273238 tcactttattacttagtaaacaatt 39273262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 26 - 230
Target Start/End: Original strand, 1848103 - 1848307
Alignment:
Q  26 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataaccct 124  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||| | |||| |||| |||  ||||| || | |||||||    
T  1848103 gagattcgaagaatcataaccgctgcttacttttctgcaaccaaaa-caggtaaacttgctctgtttcaaacagataaaaattgcaagctctctaaccct 1848201  T
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    ||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||||  ||||||   |||||||||||| | ||||||| ||||||||||    
T  1848202 taatttttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggacgaaaggacaatcccagtggatacgatactgtacttatcactttattac 1848301  T
Q  225 ttggta 230  Q
    ||||||    
T  1848302 ttggta 1848307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 38 - 237
Target Start/End: Original strand, 3329544 - 3329745
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttat-at 136  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| |||  ||||||| | ||||||||| |||| || ||    
T  3329544 atcctaaccgctgcttacttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaactctctaacccttatctttcattat 3329643  T
Q  137 -cgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaa 235  Q
     ||| ||||||||||||||||||||| || ||| |||| | ||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||| ||    
T  3329644 acgttaaacttacaaaaataagtaacgcagattgtttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaataa 3329743  T
Q  236 tt 237  Q
    ||    
T  3329744 tt 3329745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 2564040 - 2563820
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    |||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||| |||||| |||| |||  | ||||| | |||||||||     
T  2564040 gattcgaaggatcctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaatttcaactctctaacccttat 2563941  T
Q  128 ctt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    |||   |||||||||  |||||||| |||||||||||||||||| |||| ||||||| ||||||  ||||||||||||| ||||||||  ||||||||||    
T  2563940 cttttattatatcgt-gaacttacagaaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgatactctactta-cactttattac 2563843  T
Q  225 ttggtaaacaattcagtacactt 247  Q
    ||||||||| |||  ||||||||    
T  2563842 ttggtaaacgatttggtacactt 2563820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 8978868 - 8979088
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||| | ||||  ||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||  |||||| |||| |||  |||||    
T  8978868 aatataaacagaggggatttaaagaatcctaactgctgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaa 8978967  T
Q  113 ctttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctact 210  Q
     |   ||||||||  | ||||||||| ||||||||||| |||||||||||  | |||| |||| |||||||||||||| ||||||||| |||| ||||||    
T  8978968 atcc-taacccttttatcttttatattgtcaaacttaccaaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatgatactctact 8979066  T
Q  211 tattactttattacttggtaaa 232  Q
    ||| ||||||||||||||||||    
T  8979067 tatcactttattacttggtaaa 8979088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 8053926 - 8054155
Alignment:
Q  14 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac 113  Q
    ||||||||||| | ||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||||| |  ||||||||||| |||| | |||     
T  8053926 atataaacagaggggattcaaagaatcctaactgctgcttacttttctgcaacc-aaaacaggtaaacttgctatattgcaaatagataaaatttacaag 8054024  T
Q  114 t-ttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 212  Q
    | || |||| |||| ||||||||||||| |||||||||||||||||||    |||| ||||   ||||| |||||  |||||||||||||| |||| |||    
T  8054025 tcttttaactcttatcttttatatcgtc-aacttacaaaaataagtaatgagaattgtttg---gaaacgacaattcatgtggatacgatactctaatta 8054120  T
Q  213 ttactttattacttggtaaacaattcagtacactt 247  Q
    | ||||||||||||||||||| |||  ||||||||    
T  8054121 tcactttattacttggtaaacgatttggtacactt 8054155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 16365942 - 16365707
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||| ||  ||||||||||| |||||||||||||||||||||| |||||||||||||| |||| ||||||| | ||||||||||| |||  || ||    
T  16365942 aatataaataggggagattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacatgtaa-cttgctcagatgcaaatagatcaaaattgaaa 16365844  T
Q  113 ctttataacccttaactttt-----atatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattct 207  Q
     | | ||| |||||||| ||     |||||||||| ||||  |||||||||||| | |||| |||| || |||| |||||| |||||||||||||| |||    
T  16365843 atctctaaaccttaactcttttattatatcgtcaa-ctta--aaaataagtaacgcgaattgtttgcacaaaacgacaatccatgtggatacgatactct 16365747  T
Q  208 acttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| ||||||||||||||||||||| |||  ||||||||    
T  16365746 actttttactttattacttggtaaacgatttggtacactt 16365707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 233
Target Start/End: Complemental strand, 20582491 - 20582275
Alignment:
Q  14 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa- 112  Q
    ||||| ||| ||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||  |||||     
T  20582491 atatatacaaatgggattcgaagaatcctaactgctgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaatagataaaaattgcaaa 20582393  T
Q  113 -ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactt 211  Q
     |||| ||||||||| ||||||||||||| |||||| |||| ||||||||   |||| | || | ||||| || |||  |||||||||||||    ||||    
T  20582392 tctttttaacccttaccttttatatcgtc-aacttataaaattaagtaacgagaattgtatggaagaaacgacgatccctgtggatacgata---cactt 20582297  T
Q  212 attactttattacttggtaaac 233  Q
    || ||||||||| |||||||||    
T  20582296 atcactttattaattggtaaac 20582275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 113 - 249
Target Start/End: Original strand, 13759823 - 13759959
Alignment:
Q  113 ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 212  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| | || | |||| ||||||| ||||||  |||||||| |||| ||||||||    
T  13759823 ctttctaaaccttaacttttatatcgtcaaacttacaaaaataagtaacgcgaactgtttggacgaaacgacaatccttgtggatatgatactctactta 13759922  T
Q  213 ttactttattacttggtaaacaattcagtacacttac 249  Q
    | ||||||||| ||||||||| |||  ||||||||||    
T  13759923 tcactttattaattggtaaacgatttggtacacttac 13759959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 16058910 - 16059099
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||| ||||| |||||||| |||||| |||| |||  || ||||            |    
T  16058910 gattcgaagaatcctaacagctgcttactttactgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgaaactc-----------a 16058998  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattactt 226  Q
    |||||||| |||||||||||||||||||||||||  ||||| |||| ||||||  |||||| |||||||||||||| |||||||| | ||||||||||||    
T  16058999 cttttataccgtcaaacttacaaaaataagtaactaaaattgtttggacgaaaggacaatccatgtggatacgatactctacttactaactttattactt 16059098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 249
Target Start/End: Complemental strand, 3734819 - 3734596
Alignment:
Q  26 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctt 125  Q
    ||||||| |||  ||||||||  ||||||||||||||||||||||| ||||||| ||||||||| |||||| |||| |||| |||||  || ||||||||    
T  3734819 gagattcaaagagtcctaaccattgcttacttttctgcaaccaaaa-caggtaa-cttgctctgttgcaaacagataaaatttgcaatctt-taaccctt 3734723  T
Q  126 aact-------tttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactt 218  Q
    ||||       ||||||||||||| ||||   |||||||||||   |||| |||| || ||||||||||  |||||||||||||| ||||||||| ||||    
T  3734722 aactcttttattttatatcgtcaa-ctta---aaataagtaacgtgaattgtttggaccaaacaacaattcatgtggatacgatactctacttatcactt 3734627  T
Q  219 tattacttggtaaacaattcagtacacttac 249  Q
    |||||||||||||| ||||  ||||||||||    
T  3734626 tattacttggtaaaaaatttggtacacttac 3734596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 11803304 - 11803103
Alignment:
Q  14 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac 113  Q
    ||||| ||||| | ||||||||  ||||||||||||| |||||| ||||||||||||| ||||||||||||||||| |||||| | | |||| ||         
T  11803304 atatatacagaggggattcgaataatcctaaccgctggttacttctctgcaaccaaaa-caggtaaacttgctctgttgcaaaca-actaaaaat----- 11803212  T
Q  114 tttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttat 213  Q
      |  ||||  |||||||||||  |||||||||||||||||||||||| | |||| |||| ||||||  ||||||  ||||||||||||| |||||||||    
T  11803211 --ttcaacc--taacttttatactgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctacttat 11803116  T
Q  214 tactttattactt 226  Q
     ||||||||||||    
T  11803115 cactttattactt 11803103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 247
Target Start/End: Original strand, 18368866 - 18369077
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgca--actttataacccttaa-cttttat 134  Q
    |||||||||| | ||||||||||| ||||||||| ||||||| |||||| || |||||| |||| |||  ||||  ||||| |||||||| | |||||||    
T  18368866 atcctaaccgtttcttacttttctacaaccaaaagcaggtaa-cttgctttgttgcaaacagataaaaattgcacgactttctaaccctttatcttttat 18368964  T
Q  135 atc-gtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||  ||||| |||| |||||||||||||   |||| |||| ||||||| ||||||  | ||||||| ||| ||||||||| |||||||||||||||||||    
T  18368965 atttgtcaa-cttataaaaataagtaactagaattgtttggacgaaacgacaatccctatggatacaatactctacttatcactttattacttggtaaac 18369063  T
Q  234 aattcagtacactt 247  Q
     ||| |||||||||    
T  18369064 tatttagtacactt 18369077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 225
Target Start/End: Original strand, 7492163 - 7492338
Alignment:
Q  51 cttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaactttt-----atatcgtcaaact 145  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| || | |||  ||||| | | |||||||||||| ||     ||||| ||||| |    
T  7492163 cttacttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaacagttaaaaattgcaaatctctaacccttaactcttttattatatcatcaaaat 7492261  T
Q  146 tacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
       ||||||||||||  |||||| |||||||||||||||||||  ||||||||||||| ||||||||| | |||||||||    
T  7492262 ---aaaaataagtaatgcaaattgtttgaacgaaacaacaatccttgtggatacgatactctacttatcattttattact 7492338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 4786062 - 4785990
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||    
T  4786062 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggt-aacttgctctattgcaaatagat 4785990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 8054458 - 8054586
Alignment:
Q  118 taacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattact 217  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||  |||| |||| ||||||| |||||   |||| |||||||| ||||||||| |||    
T  8054458 taactcttatcttttatatcgtcaa-cttacaaaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacgatactctacttatcact 8054556  T
Q  218 ttattacttggtaaacaattcagtacactt 247  Q
    |||||| ||||||||| |||  ||||||||    
T  8054557 ttattatttggtaaacgatttggtacactt 8054586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 6042672 - 6042477
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||| | || |||  |||||| |  || |  |||     
T  6042672 gattcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaactt-ctctgttgcaaacatataaaaattgcaacatc-tatctttta- 6042576  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
       ||||| |||||||||   ||||||||||||| |||||| |||||||||||| |||| || ||||||||||||| ||||||||  | |||||||| ||    
T  6042575 ---ttataccgtcaaact---aaaaataagtaacgcaaattgtttgaacgaaacgacaacctctgtggatacgatactctactta-cattttattacatg 6042483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 229
Target Start/End: Complemental strand, 8877643 - 8877441
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttact-tttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccct 124  Q
    ||||| ||| ||||||||||||||||||| ||| |||||||||||  |||||||||||||||| |||||| |||| |||  |||||   ||| |||||||    
T  8877643 gattcaaagaatcctaaccgctgcttactatttttgcaaccaaaat-aggtaaacttgctctgttgcaaacagataaaaattgcaagtttttttaaccct 8877545  T
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacaca-aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatta 223  Q
    |||||||||||  ||| |||||| |||||||||| ||| | |||| |||  || |||   ||||| |||||||||||||| ||||||||| || ||||||    
T  8877544 taacttttatactgtc-aacttataaaaataagt-acagagaattgtttcgacaaaagggcaatccatgtggatacgatactctacttatcaccttatta 8877447  T
Q  224 cttggt 229  Q
    ||||||    
T  8877446 cttggt 8877441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 9864327 - 9864423
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||| |||||| |||  ||||||| ||||||  |||||||| |||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  9864327 aaataagtaacgcaaattgtttagacgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaacaatttggtacactt 9864423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 31493029 - 31492946
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||| ||||||| |||| || |||| |||||| |||||||||||||| ||||||||| |||||||||| ||||||||    
T  31493029 aaaataagtaaaacaaattgtttggacaaaacgacaatccatgtggatacgatactctacttatcactttattacctggtaaac 31492946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 5530119 - 5530033
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    |||||||||||||||||| |||| ||||||| | ||||| ||||||||||||  | ||||||| | |||||||||||||||||||||    
T  5530119 aaataagtaacacaaattgtttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattacttggtaaacaatt 5530033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 23099967 - 23100049
Alignment:
Q  165 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| |||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||  ||||||||    
T  23099967 aattgtttggacgaaacgacaatctatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacactt 23100049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 5108787 - 5108714
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| || |||||||||||||  |||||| ||||    
T  5108787 gattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagat 5108714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 9916664 - 9916583
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||||||||||||| ||| ||||   ||||| |||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  9916664 aaataagtaacacatattgtttggttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaa 9916583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 9924576 - 9924495
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||||||||||||| ||| ||||   ||||| |||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  9924576 aaataagtaacacatattgtttggttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaa 9924495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 237
Target Start/End: Complemental strand, 17077325 - 17077140
Alignment:
Q  40 cctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgt 139  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||  |||||| |||| |||  ||||||        ||  |||||||||| |||    
T  17077325 cctaaccgctgcttacttttctgcaaacaaaa-caggtaaacttactctattgcaaacagataaaaattgcaac--------cc--aacttttataccgt 17077237  T
Q  140 caaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    ||| |||||||||||||||||||  |||| |||| ||||||| ||||||    ||||||| ||| ||||| ||| ||||||||| ||| |||||||||    
T  17077236 caa-cttacaaaaataagtaacatgaattgtttggacgaaacgacaatccccatggatacaatactctacctatcactttattatttgataaacaatt 17077140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 9574481 - 9574409
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||||||| ||| |||||||||    
T  9574481 acgaaacaacaatctctgtagatacgatactctacttatcactttattccttggtaaacgatttagtacactt 9574409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 229
Target Start/End: Complemental strand, 13418743 - 13418553
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||| ||| ||||||||||||||||||||| |||||| | ||||||||||||||||||||| |||||| |||| |||  |||||          | |||    
T  13418743 gattcaaagaatcctaaccgctgcttactttgctgcaatc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa----------cctaa 13418655  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaac-acaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattac-tttattact 225  Q
    |||||||| |||| |||||| ||||||||||||| ||||| | |||| ||||||  ||||||  | ||||||||||| ||||||||| || |||||||||    
T  13418654 cttttataccgtc-aacttaaaaaaataagtaacgacaaa-tgtttggacgaaaggacaatccctatggatacgatactctacttatcacttttattact 13418557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 7318347 - 7318289
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  7318347 acgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaac 7318289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 7397362 - 7397316
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacag 75  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7397362 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacag 7397316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 227
Target Start/End: Complemental strand, 13277627 - 13277525
Alignment:
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    ||||||||||| ||| |||||||||||||||| |||||  |||| || | ||||||  |||||| |||||||||||||| |||| |||| ||| ||||||    
T  13277627 taacttttataccgttaaacttacaaaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctatttatcactgtattac 13277528  T
Q  225 ttg 227  Q
    |||    
T  13277527 ttg 13277525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 17153179 - 17153237
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  17153179 acgaaacgacaatctatgtggatacgatactctacttatcactttcttacttggtaaac 17153237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 247
Target Start/End: Original strand, 9731516 - 9731724
Alignment:
Q  40 cctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa--ctttta---t 134  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||| || | || |||||| |||  ||||| | | |||  | |||  ||||||   |    
T  9731516 cctaaccgctgcttacttttatgcaaccaaaaacaggt-aacttgctatgttacacatagataaaaattgcaaatctctaattcgtaactcttttatttt 9731614  T
Q  135 atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaaca 234  Q
    ||| |||||||   ||||||||||||| | |||| |||| ||||||| ||||||  ||||| ||||||| ||||||||| |||||| |||||  |||||     
T  9731615 atcatcaaact---aaaaataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctacttatcactttactactttttaaacg 9731711  T
Q  235 attcagtacactt 247  Q
    |||  ||||||||    
T  9731712 atttggtacactt 9731724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 4449102 - 4449002
Alignment:
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    ||||||||| ||||||||||||||||||||||||||  |||| |||| || |||  ||| ||  ||||||||| ||| | ||||||| ||||||||||||    
T  4449102 acttttataccgtcaaacttacaaaaataagtaacaagaattgtttggacaaaaggacagtccctgtggatacaatactttacttatcactttattactt 4449003  T
Q  227 g 227  Q
    |    
T  4449002 g 4449002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 11221163 - 11221261
Alignment:
Q  149 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||| |||||| |||  ||||||| ||||||  ||||||||| ||| ||||||||| | |||||||||| |||||| |||  ||||||||    
T  11221163 aaaaataagtaacgcaaattgtttacacgaaacgacaatccctgtggatacaatactctacttatcaatttattacttagtaaacgatttggtacactt 11221261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 17153045 - 17153098
Alignment:
Q  42 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  17153045 taaccgctgcttacttttctgcaaccaaaaacaggt-aacttgctttgttgcaaa 17153098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 5797570 - 5797529
Alignment:
Q  190 atgtggatacgatattctacttattactttattacttggtaa 231  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  5797570 atgtggatacgatactctacttattactttattacttggtaa 5797529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 8313420 - 8313477
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||| ||||||  ||||||||||||| ||||||||| ||||||||||||||||||    
T  8313420 acgaaacgacaatccctgtggatacgataatctacttatcactttattacttggtaaa 8313477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 10587024 - 10587121
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||  | || |||  ||||||| ||||||  ||| ||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  10587024 aaaataagtaacatgagttgtttagacgaaacgacaatccctgtagatacgatactctacttatcactttattacttggtaaacgatttggtacactt 10587121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 9131132 - 9131073
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctct 88  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||    
T  9131132 gattcgaagaatcctaaccgcagcttacttttttgcaaccaaaaaca-gttaacttgctct 9131073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 10584487 - 10584583
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||| |||| |||  | ||||| |||||| |||||||||||||| | | ||||| ||||||||||||| ||||| |||  ||||||||    
T  10584487 aaataagtaacacgaattgtttctatgaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataaacgatttggtacactt 10584583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 10937674 - 10937618
Alignment:
Q  177 gaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||| |||||| |||||||||||||| | ||||||| |||||||||||||||||||    
T  10937674 gaaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaac 10937618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 13289288 - 13289348
Alignment:
Q  20 acagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    ||||||| ||||||||| || |||||||||  ||| |||||||||||||||||||||||||    
T  13289288 acagatgggattcgaagaattctaaccgcttattaattttctgcaaccaaaaacaggtaaa 13289348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 16297724 - 16297810
Alignment:
Q  41 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact 129  Q
    |||||||||||||||||||||||||||||||| |||| ||||| ||||| |||||| | || |||  ||||| ||| ||||||||||||    
T  16297724 ctaaccgctgcttacttttctgcaaccaaaaataggt-aacttactctgttgcaaacatataaaaattgcaa-tttctaacccttaact 16297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 18495471 - 18495375
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||||||| |||  ||||||| ||||||    |||||||  || | ||||||| |||||||||||| |||||||||| |||||||||    
T  18495471 aaataagtaacacaaattgtttagacgaaacgacaatccccatggatacattactttacttatcactttattacttagtaaacaatttagtacactt 18495375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 18662661 - 18662595
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    |||||||||  ||||||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||    
T  18662661 gattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctctgttgcaaa 18662595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 4819063 - 4819002
Alignment:
Q  28 gattcgaaggatcctaaccgc--tgcttacttttctgcaaccaaaaacaggtaaacttgctct 88  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||| |||| ||||||||||    
T  4819063 gattcgaagaatcctaaccgcgctgcttacttttctgcaaccaaaaataggt-aacttgctct 4819002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 15869694 - 15869611
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||||||| || | |||||  || |||||| ||||  || |||||||||| ||||||||| |||||||||||||||||||    
T  15869694 aaaataagtaacgcagactatttagacaaaacaaaaatccttgcggatacgatactctacttatcactttattacttggtaaac 15869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 18467549 - 18467474
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    |||||||||||| ||||| |||  ||||||| |||||| |||||||||| ||| | ||||||| ||||||||||||    
T  18467549 aaataagtaacataaattgtttagacgaaacgacaatccatgtggatacaatactttacttatcactttattactt 18467474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 1584642 - 1584561
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||||||||||| | | || |||  ||||||||||||||  ||||||||||||| || |||||| ||||||||||||||||||    
T  1584642 aaaataagtaacgcgatttgtttagacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttggtaaa 1584561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 2350763 - 2350829
Alignment:
Q  166 attatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||||||| || |||| |||||| |||||||||||||| ||||||||  | ||||||||||||||||    
T  2350763 attatttggacaaaacgacaatccatgtggatacgataatctacttagcagtttattacttggtaaa 2350829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 5108649 - 5108568
Alignment:
Q  165 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| |||| ||||||| ||||||  ||||||||||||| ||||||||  |||||||||||||||||| ||||  ||||||||    
T  5108649 aattgtttggacgaaacgacaatccttgtggatacgatactctactta-cactttattacttggtaaataatttggtacactt 5108568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 9245279 - 9245197
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||||| |||| ||| |||||||  |||||| |||||||||||||| ||| ||||  | ||| |||||||||||||    
T  9245279 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaac 9245197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 9261302 - 9261220
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||| |||||||||| ||| |||||||  |||||| || ||||||||||| ||| ||||| | ||| |||||||||||||    
T  9261302 aaataagcaacacaaattgtttaaacgaaatgacaatccatatggatacgatactctgcttatcatttttttacttggtaaac 9261220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 18449340 - 18449254
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    ||||||||||| | |||| ||||   ||||| ||||||  | ||||||||||||| ||||| | |||||||||||||||||||||||    
T  18449340 aaataagtaacgccaattgtttggctgaaacgacaatccctatggatacgatattatacttctcactttattacttggtaaacaatt 18449254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 18662539 - 18662457
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||||||   |||| |||| ||||||| ||||||  ||||||||||||| ||||||||| |||||| | ||||||||||    
T  18662539 aaataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttagtgcttggtaaac 18662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 1872884 - 1872808
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    |||||||||||||| |||| |||| | ||||| ||||  ||||||||||||||| ||||||||| | | ||||||||    
T  1872884 aaaataagtaacacgaattgtttgtatgaaacgacaacttatgtggatacgatactctacttatcattgtattactt 1872808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 9890237 - 9890185
Alignment:
Q  195 gatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||| |||||||| |||||||||||| ||||||| ||| |||||||||    
T  9890237 gatacgatactctacttactactttattactcggtaaacgatttagtacactt 9890185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 16297835 - 16297902
Alignment:
Q  165 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||| |||| ||||||  |||||| ||||| |||||||| ||||||||| || |||||||||||||||    
T  16297835 aattgtttggacgaaatgacaatccatgtgaatacgataatctacttatcacattattacttggtaaa 16297902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 4579195 - 4579114
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||||| |||| |||| || |||  ||||||| | ||||||||||| ||||||||| || ||||||||| ||||||    
T  4579195 aaataagtaacacgaattgtttggacaaaaagacaatctctttggatacgatactctacttatcac-ttattacttagtaaac 4579114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 15869831 - 15869765
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaa 79  Q
    |||||||||||  | ||||| |||  ||||||||| || |||||||| |||||||||||||||||||    
T  15869831 aatataaacaggggggattcaaagagtcctaaccgttgtttacttttatgcaaccaaaaacaggtaa 15869765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 4449189 - 4449113
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaa 105  Q
    ||||| ||| || |||||||||| |||||||| ||||||| |||| ||||||| | ||||||||||||| |||| |||    
T  4449189 gattcaaagaattctaaccgctgtttacttttttgcaacc-aaaataggtaaattcgctctgctgcaaacagataaaa 4449113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 4986654 - 4986557
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||| | |  |||||  ||||||| |||||| |||||| ||| ||| |||||| |  ||||||||||||||||||| |||  ||||||||    
T  4986654 aaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacactt 4986557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 4990752 - 4990655
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||| | |  |||||  ||||||| |||||| |||||| ||| ||| |||||| |  ||||||||||||||||||| |||  ||||||||    
T  4990752 aaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacactt 4990655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 5797731 - 5797656
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactt-gctctgctgcaaatagattaa 104  Q
    ||||| ||| ||||||||||||||| || || |||||| ||||| ||||||||||| |||||| ||||||||||||||    
T  5797731 gattcaaagaatcctaaccgctgctaacatt-ctgcaatcaaaa-caggtaaactttgctctgttgcaaatagattaa 5797656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 9131005 - 9130918
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggata--cgatattctacttattactttattacttggtaaacaatt 237  Q
    ||||||||| ||||||||||||| ||||||| | |||| |||||||||  | ||| | ||||||  ||||||||||||| |||||||||    
T  9131005 aaataagtatcacaaattatttggacgaaacgataatccatgtggatatacaatactatacttac-actttattacttgataaacaatt 9130918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 9500518 - 9500461
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||||||||||  ||||||||||||| |||| | || || |||||||||||||||    
T  9500518 acgaaacaacaatccttgtggatacgatactctaatgatcacattattacttggtaaa 9500461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 17191096 - 17191177
Alignment:
Q  33 gaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 114  Q
    |||| ||||||| | || ||| |||||||||||||||||||||||||| | |||||| || ||| |||| |||  |||||||    
T  17191096 gaagaatcctaatcactactttcttttctgcaaccaaaaacaggtaaaatcgctctgttggaaacagataaaaattgcaact 17191177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 17203124 - 17203036
Alignment:
Q  148 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    |||||||||||||| |  ||| |||| ||||||| ||||||   ||| |||||||| |||||||| |||||||||||||  |||||||||    
T  17203124 caaaaataagtaacgcggattgtttggacgaaacgacaatccccgtgaatacgatactctactta-tactttattacttcataaacaatt 17203036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 22067128 - 22067168
Alignment:
Q  39 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  22067128 tcctaaccgttgcttacttttctgcaacc-aaaacaggtaaa 22067168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 2453802 - 2453735
Alignment:
Q  179 aacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||| |||||||||| |||||||| ||||||||  | ||||||||||| ||||||||| | |||||||    
T  2453802 aacaataatctatgtgaatacgatactctacttaa-attttattacttgataaacaatttaatacactt 2453735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 4785910 - 4785854
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    ||||||| ||||||  |||||||  |||| ||||||||| |||||||||||||||||    
T  4785910 acgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggtaa 4785854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 4818910 - 4818854
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    ||||||| ||||||  |||||||  |||| ||||||||| |||||||||||||||||    
T  4818910 acgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggtaa 4818854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 26134785 - 26134844
Alignment:
Q  187 tctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||||||| ||||||||  | ||||||||||||||||| |||  ||||||||    
T  26134785 tctatgtggatacgatactctactta-cattttattacttggtaaacgatttggtacactt 26134844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 7e-61; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 38 - 247
Target Start/End: Original strand, 17610143 - 17610353
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaacttttatat 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | || |||  | ||| |||| ||||| |||||||||||||    
T  17610143 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaacatataaaaattacaagctttctaacctttaacttttatat 17610242  T
Q  137 cgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaat 236  Q
    |||||||||||||||||||||||||   |||| |||| ||||||| |||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||    
T  17610243 cgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctacttataactttattacttggtaaacgat 17610342  T
Q  237 tcagtacactt 247  Q
    |  ||||||||    
T  17610343 ttggtacactt 17610353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 12208823 - 12208603
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac-tttataaccctt- 125  Q
    ||||||||| ||||||||||||||||||||||||||| | |||| ||||||||||||||||| |||||| ||||||||  || ||| ||| ||||||||     
T  12208823 gattcgaagaatcctaaccgctgcttacttttctgcagctaaaa-caggtaaacttgctctgttgcaaacagattaaaactgaaacctttctaacccttt 12208725  T
Q  126 -aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
     | ||||||||||||||| |||||||||||||||||| | |||| |||| ||||||| |||||| ||||||||| |||||||||||||| ||||||||||    
T  12208724 tatcttttatatcgtcaa-cttacaaaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattctacttatcactttattac 12208626  T
Q  225 ttggtaaacaattcagtacactt 247  Q
    ||||||||| ||| |||||||||    
T  12208625 ttggtaaacgatttagtacactt 12208603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 15543844 - 15544063
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataaccctta 126  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||| || || |||||| | || |||  ||||||| || |||||||||    
T  15543844 gattcgaagaatcctaaccgttgcttacttttctgcaacaaaaaacaggtaaacttactatgttgcaaacaaataaaaattgcaactcttttaaccctta 15543943  T
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
     |||||||||||||||| ||| ||||||||||||||| |||| |||| ||||||| ||||| |  |||||||||||| ||||||||| ||||||||||||    
T  15543944 tcttttatatcgtcaaa-ttaaaaaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacgatactctacttatcactttattactt 15544042  T
Q  227 ggtaaacaattcagtacactt 247  Q
    ||||||| |||  ||||||||    
T  15544043 ggtaaacgatttggtacactt 15544063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 21449314 - 21449091
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||  | ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| || |||||| |||| |||  ||       
T  21449314 aatataaacaggagggattcgaagaatcctaaccgctgcttacttttctgcatccaaaaacagttaaacttgctatgttgcaaacagataaaaattg--- 21449218  T
Q  113 ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 212  Q
          ||||  || |||||||| |||||||||||||||||||||||||| ||||| ||||  |||||| ||||||  ||||||||||||| ||||||||    
T  21449217 ------aacc--tatcttttataccgtcaaacttacaaaaataagtaacataaattgtttggccgaaacgacaatccttgtggatacgatactctactta 21449126  T
Q  213 ttactttattacttggtaaacaattcagtacactt 247  Q
    | ||||||||||||||||||| |||  ||||||||    
T  21449125 tcactttattacttggtaaacgatttggtacactt 21449091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 233
Target Start/End: Original strand, 25405518 - 25405713
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaa-cttttata 135  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| | || |||  ||||| |||| |||||||||| ||||||||    
T  25405518 atcctaaccgctgcttacttt-ctgcaaccaaaaacaagtaaacttgctctgttgcaaacaaataaaaattgcaagctttctaacccttaaacttttata 25405616  T
Q  136 tcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||| ||||||||||||||||||   || | |||| ||||||| ||||||  ||||||||||||| | ||||||| |||||||||||||||||||    
T  25405617 tcgtcaa-cttacaaaaataagtaacgtgaactgtttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaac 25405713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 246
Target Start/End: Complemental strand, 16179218 - 16179010
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaacttttatat 136  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||  |||| |||  |||||    | |||||||||  ||||||||    
T  16179218 atcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaagacatctaacccttatattttatat 16179119  T
Q  137 cgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaat 236  Q
    |||| |||||||||||||||||||||  |||| |||| ||||||| ||  ||  | ||||||||||| ||||||||| | ||||||||||| ||||| ||    
T  16179118 cgtc-aacttacaaaaataagtaacaagaattgtttggacgaaacgactttccttttggatacgatactctacttatcagtttattacttgttaaacgat 16179020  T
Q  237 tcagtacact 246  Q
    |  |||||||    
T  16179019 ttggtacact 16179010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 17359398 - 17359164
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||| ||| | ||||||||| |||||||||||  ||||||||| |||||||||||||||||||| ||||| || ||| |  |||| |||  |||||    
T  17359398 aatataaatagaggggattcgaagaatcctaaccgcatcttacttttatgcaaccaaaaacaggtaaatttgctatgttgccagcagataaaaattgcaa 17359299  T
Q  113 ctttataacccttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctac 209  Q
    || | ||||||||| |||   |||||||||||| ||   |||||||||||||   ||||||||| ||||||| ||||||| | |||||| |||| || ||    
T  17359298 ctctctaacccttatcttttattatatcgtcaacct---aaaaataagtaacgagaattatttggacgaaacgacaatctttatggatatgatactcaac 17359202  T
Q  210 ttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| ||||||||||||||||||| |||  ||||||||    
T  17359201 ttatcactttattacttggtaaacgatttggtacactt 17359164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 18736129 - 18736337
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||| |||| |||| |||||| |          ||    
T  18736129 gattcgaagaatccttaccgctgcctacttttctgcaaccaaaaataggtaaacttgctctattgcaaacagataaaatttgcaacct----------aa 18736218  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
     ||||||| |||||| || |||||||||||||||  ||||| |||||||||||| ||||||  |||||||||||||  |||||||| |||||||||||||    
T  18736219 attttataccgtcaacct-acaaaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttattacttg 18736317  T
Q  228 gtaaacaattcagtacactt 247  Q
     ||||| |||  ||||||||    
T  18736318 ttaaacgatttggtacactt 18736337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 9401742 - 9401511
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||| ||| | ||||||||| |||||||||||| ||||||||| || |||| ||||||||||||||| ||||| |||||| |||| |||  |||||    
T  9401742 aatataaatagaggggattcgaagaatcctaaccgctacttacttttttgtaacc-aaaacaggtaaacttactctgttgcaaacagataaaaattgcaa 9401644  T
Q  113 ctttataacccttaacttttatatcgtca--aacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctact 210  Q
    || | ||||| ||| |||||||    |||  |||||||||||||||||||| | |||| |||| ||||||| |||||  |||||||||||||| |||||     
T  9401643 ctctctaaccgttatcttttattatatcaacaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctac- 9401545  T
Q  211 tattactttattacttggtaaacaattcagtacact 246  Q
      |||||||||||| |||||||| |||  |||||||    
T  9401544 --ttactttattacctggtaaactatttggtacact 9401511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 247
Target Start/End: Complemental strand, 29242730 - 29242521
Alignment:
Q  26 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctt 125  Q
    ||||||| ||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||| |||| |||  |||||| |              
T  29242730 gagattcaaagtatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct---------- 29242642  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    ||||||||||||||||| |||||||||||| ||||| | |||| |||| | ||||| ||||||  | ||||||||||| ||||||||| |||||||||||    
T  29242641 aacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacgatactctacttatcactttattact 29242543  T
Q  226 tggtaaacaattcagtacactt 247  Q
    || |||||||||  ||||||||    
T  29242542 tgataaacaatttggtacactt 29242521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 229
Target Start/End: Original strand, 21666486 - 21666687
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||||||| |||||||||||| | |  |||||| |||| |||  | | |  |||| ||||||||    
T  21666486 gattcgaagaatcctaaccattgcttacttttctacaaccaaaa-caggtaaacttgttgtcttgcaaacagataaaaattactagtctttttaaccctt 21666584  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    | ||||||||||||||| |||| |||||||||||||   |||| |||| ||||||  |||||| |||||||||||||| ||||||||| |||||||||||    
T  21666585 atcttttatatcgtcaa-cttataaaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttattact 21666683  T
Q  226 tggt 229  Q
    ||||    
T  21666684 tggt 21666687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 31235927 - 31236145
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaac 128  Q
    |||| ||| ||| |||||| ||||||||||| |||||||||||||| |||||||||||||| |||||| |||| |||  ||||||| | |||||||||      
T  31235927 attcaaagaatcttaaccgttgcttacttttatgcaaccaaaaacaagtaaacttgctctgttgcaaagagataaaaattgcaactctctaacccttata 31236026  T
Q  129 tt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    ||   |||||||||| |||||  ||||||||||||| | ||||||||| || |||| ||||||| ||| ||||  ||| ||| ||||| |||||||||||    
T  31236027 ttttattatatcgtc-aactt--aaaaataagtaacgcgaattatttggacaaaacgacaatctttgtagatataatactctgcttatcactttattact 31236123  T
Q  226 tggtaaacaattcagtacactt 247  Q
    | |||||| |||| ||||||||    
T  31236124 tagtaaacgattcggtacactt 31236145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 237
Target Start/End: Original strand, 16069440 - 16069638
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaa-tatgcaactttataacccttaa 127  Q
    |||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||  |||| ||| | |||||| |||              
T  16069440 attcgaagaatcctaactgctgcttacttttctacaaccaaaa-caggtaaacttgctctgttgcaagcagataaaaatttgcaacctta---------- 16069528  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    |||||||| || |||||||||||||||||||||||  |||| ||  |||||||| ||||||  |||| ||| |||||| ||||||| |||||||||||||    
T  16069529 cttttataccgccaaacttacaaaaataagtaacaagaattgttcaaacgaaacgacaatccctgtgtatatgatattttacttatcactttattacttg 16069628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 232
Target Start/End: Original strand, 21987872 - 21988064
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaac 128  Q
    |||| ||| ||||| |||||||||||||||| |||||||||||||||||||| |||||||| |||||| | || |||  |||||          | ||||    
T  21987872 attcaaagaatccttaccgctgcttacttttatgcaaccaaaaacaggtaaagttgctctgttgcaaacatataaaaattgcaa----------cctaac 21987961  T
Q  129 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 228  Q
    ||||||| |||| | |||||||||||||||||| | ||||  ||| ||||||  |||||||  | |||||||||| ||||||||| ||||||||| ||||    
T  21987962 ttttataccgtc-agcttacaaaaataagtaacgcgaattgattggacgaaatgacaatctccgaggatacgatactctacttatcactttattatttgg 21988060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 229
Target Start/End: Complemental strand, 22623112 - 22622910
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 125  Q
    |||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| || |||   ||||  |||| ||||| ||    
T  22623112 gatttgaagaatcctaacagctgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaatatataaaaatggcaagtctttttaaccgtt 22623014  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    |||||| ||| | ||||  | | |||| |||||||| | |||| |||| ||||||  ||||||  |  ||||| |||| |||||| || |||||||||||    
T  22623013 aactttaataccatcaacttaataaaattaagtaacgcgaattttttggacgaaaggacaatcccttaggatatgatactctactaatcactttattact 22622914  T
Q  226 tggt 229  Q
    ||||    
T  22622913 tggt 22622910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 232
Target Start/End: Original strand, 16916823 - 16917016
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||| | |||||| |||||| |||| |||  ||||||           |||    
T  16916823 gattcgaagaatcctacccgctgcttacttttctgcaaccaaaaacaggtaaattcgctctgttgcaaagagataaaaattgcaac-----------taa 16916911  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattactt 226  Q
    |||||||| |||| ||| || |||||||||||||   |||| || | ||||||  ||||||  ||||||||||||| |||||||| | ||||||||||||    
T  16916912 cttttataccgtc-aacctataaaaataagtaacgagaattgttcggacgaaaggacaatccctgtggatacgatactctacttactaactttattactt 16917010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 13345337 - 13345433
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||| | |||| |||| || |||| |||||| ||||||||| |||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  13345337 aaataagtaacgcgaattgtttggacaaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacaatttggtacactt 13345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 14781743 - 14781930
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||| |||| | ||||||||||||||||||||||||||| |||||||| |||||| | || |||  |||||||            |    
T  14781743 gattcgaagaatcctaactgctgatcacttttctgcaaccaaaaacaggtaaatttgctctgatgcaaacatataaaaattgcaact------------a 14781830  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    ||||| | | |||||||||||||||||||||| |   |||| || | ||||||  |||||   ||||||||||||| |||||||| ||||||||||||||    
T  14781831 cttttttcttgtcaaacttacaaaaataagtatctagaatttttcggacgaaaggacaattcttgtggatacgatactctacttactactttattacttg 14781930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 16787724 - 16787809
Alignment:
Q  148 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||||||||| |||||| ||||  | |||| |||||||||||| |||||||| ||||||||| ||||||||||||| |||||    
T  16787724 caaaaataagtaacgcaaattgtttgggcaaaacgacaatctatgtgaatacgatactctacttatcactttattacttgataaac 16787809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 727588 - 727489
Alignment:
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    |||||||||||||||||| ||||||||||||||||  |||| || | |||||| |  ||||  ||||||| ||||| ||||||||| |||||||||||||    
T  727588 cttttatatcgtcaaactaacaaaaataagtaacaagaattgttcggacgaaagagtaatccttgtggatgcgatactctacttatcactttattacttg 727489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 24054099 - 24054001
Alignment:
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    |||||||| ||||||||||||| |||||||||||| ||||| ||   ||||||  ||||||  |||||||| |||| |||||||||||||||||||||||    
T  24054099 cttttataccgtcaaacttacataaataagtaacaaaaattgttgagacgaaaggacaatccctgtggata-gatactctacttattactttattacttg 24054001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 18825781 - 18825675
Alignment:
Q  123 cttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 222  Q
    |||||||||| |||||||||||||| |||| ||||||||  ||||| || |||| |||  |||| |  ||||||||||||| | ||||||| ||||||||    
T  18825781 cttaacttttgtatcgtcaaacttataaaattaagtaacgaaaattgttcgaactaaaggacaacccttgtggatacgatactttacttatcactttatt 18825682  T
Q  223 acttggt 229  Q
    |||||||    
T  18825681 acttggt 18825675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 25403978 - 25404036
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||    
T  25403978 atcctaaccgctacttacttttctggaaccaaaaacaggtaaagttgctctgttgcaaa 25404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 3591654 - 3591750
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||  | |||| |||| || |||| ||||||||||||||||||||| |||| |||| ||||||||||||| ||||| |||  ||||||||    
T  3591654 aaataagtaaggcgaattgtttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataaacgattttgtacactt 3591750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 17121377 - 17121421
Alignment:
Q  27 agattcgaaggatcctaaccgctgcttacttttctgcaaccaaaa 71  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  17121377 agattcgaagaatcctaaccgctgcttacttttctgcaaccaaaa 17121421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 18529079 - 18529137
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaat 97  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  18529079 atcctaaccactgcttacttttctacaacc-aaaacaggtaaacttgctctgttgcaaat 18529137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 28008328 - 28008283
Alignment:
Q  26 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaa 71  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  28008328 gagattcaaagaatcctaaccgctgcttacttttctgcaaccaaaa 28008283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 17837615 - 17837519
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||| | |||| |||  || |||  ||||||  |||||||| |||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  17837615 aaataagtaacgcgaattgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattacttggtaaacaatttggtacactt 17837519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 23038037 - 23038108
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||| |||||| |||||||||||||| || |||||| ||||||||||||||||||| |||  ||||||||    
T  23038037 acgaaacgacaatccatgtggatacgatactc-acttatcactttattacttggtaaacgatttggtacactt 23038108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 14779684 - 14779582
Alignment:
Q  129 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 228  Q
    |||||||||||||| ||||||||||||| |||| | |  | |||| ||||||| ||||||  |||||||| |||| |||| |||| || |||||||||||    
T  14779684 ttttatatcgtcaa-cttacaaaaataaataacgcgatatgtttggacgaaacgacaatccctgtggatatgatactctaattatcacattattacttgg 14779586  T
Q  229 taaa 232  Q
    ||||    
T  14779585 taaa 14779582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 21334595 - 21334646
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaa 79  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||| ||||||    
T  21334595 gattcgaagaatcctaaccgctgtttacttttcttcaaccaaaaataggtaa 21334646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 24214643 - 24214560
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||||  || || |||  |||||||||||||| ||||||||||  || | ||||||| |||||||||||||||||||    
T  24214643 aaaataagtaacgtaagttgtttagacgaaacaacaatccatgtggatacagtactgtacttatcactttattacttggtaaac 24214560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 24281376 - 24281293
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||||||| |||||| || | |  |||| | |||| ||||||||| |||| ||||||||| |||||||||||||||||||    
T  24281376 aaaataagtaacgcaaattgttcggaaaaaacgataatccatgtggatatgataatctacttatcactttattacttggtaaac 24281293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 51473875 - 51473950
Alignment:
Q  149 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    ||||| ||||||| |||||| |||| || |||| |||||| || ||||||||||| ||||||||| ||||||||||    
T  51473875 aaaaacaagtaacgcaaattgtttggacaaaacgacaatccatatggatacgatactctacttatcactttattac 51473950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 18830607 - 18830501
Alignment:
Q  123 cttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 222  Q
    ||||||||||||| ||||||| ||| |||||||||||| |  |||| |||| ||||||  ||||||  ||||||||||||| | ||  ||| ||||| ||    
T  18830607 cttaacttttataccgtcaaaattaaaaaaataagtaaaaagaattgtttggacgaaaggacaatccctgtggatacgataatttaagtatcactttgtt 18830508  T
Q  223 acttggt 229  Q
    |||||||    
T  18830507 acttggt 18830501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 21847717 - 21847636
Alignment:
Q  165 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| |||| ||||||| |||||| |||||||||| ||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  21847717 aattgtttggacgaaacgacaatccatgtggatacaatactctacttag-actttattacttggtaaacgatttggtacactt 21847636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 24306346 - 24306388
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  24306346 tgtggatacgatactctacttatcactttattacttggtaaac 24306388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 9787904 - 9787961
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||| ||||| ||| ||||||||||| ||||||||| ||||||||||||| ||||    
T  9787904 acgaaacgacaatttatatggatacgatactctacttatcactttattacttgctaaa 9787961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 9787769 - 9787823
Alignment:
Q  41 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||||||  |||||||||||||||||||||||||||  |||||||||| ||||||    
T  9787769 ctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgttgcaaa 9787823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 18100905 - 18100989
Alignment:
Q  42 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact 129  Q
    |||||||||||||||||||||||||| |||||| || |||||||| || |||||| |||| |||  ||||| ||| ||||||||||||    
T  18100905 taaccgctgcttacttttctgcaacc-aaaacatgt-aacttgctatgttgcaaacagataaaaattgcaa-tttctaacccttaact 18100989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 21973097 - 21973134
Alignment:
Q  41 ctaaccgctgcttacttttctgcaaccaaaaacaggtaa 79  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  21973097 ctaaccgctg-ttacttttctgcaaccaaaaacaggtaa 21973134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 34481027 - 34480985
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||  ||||||||||||| |||||||||||||||||||    
T  34481027 tgtggatataatattctacttatcactttattacttggtaaac 34480985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 44795447 - 44795386
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||| ||||||| |||||| |||||||||||||| || ||||||  |||||||||||||||||    
T  44795447 tttggacgaaacgacaatccatgtggatacgatactc-acttatctctttattacttggtaaa 44795386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 22664263 - 22664222
Alignment:
Q  192 gtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||| |||| ||||||||| |||||||||||||||||||    
T  22664263 gtggataagatactctacttatcactttattacttggtaaac 22664222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 23179920 - 23179819
Alignment:
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattact 225  Q
    ||||||||| |||||||||||||||||||| ||||   |||| || | ||||||  ||||||  |||||||| |||| |||| ||| | |||||||||||    
T  23179920 acttttataccgtcaaacttacaaaaataaataacgagaattgttcggacgaaaggacaatccctgtggatatgatactctatttactaactttattact 23179821  T
Q  226 tg 227  Q
    ||    
T  23179820 tg 23179819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 24267807 - 24267864
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||||||||||||| |||||| |||| | ||||||| | ||||||||||| ||||    
T  24267807 acgaaacaacaatctatatggatatgatactatacttatcattttattacttgataaa 24267864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 27117720 - 27117801
Alignment:
Q  152 aataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||||| || ||| ||||   ||||| |||||  ||||| |||| ||| ||||||||| |||||||||||||||||||    
T  27117720 aataagtaacgcagattgtttggttgaaacgacaattcatgtgaatacaatactctacttatcactttattacttggtaaac 27117801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 22664417 - 22664385
Alignment:
Q  39 tcctaaccgctgcttacttttctgcaaccaaaa 71  Q
    ||||||||||| |||||||||||||||||||||    
T  22664417 tcctaaccgctacttacttttctgcaaccaaaa 22664385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 23180006 - 23179962
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaa 72  Q
    ||||||||  ||||| |||||||||||||||||| ||||||||||    
T  23180006 gattcgaataatccttaccgctgcttacttttctccaaccaaaaa 23179962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 26540953 - 26540898
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  26540953 tgtggatacgatactctacttac-actttattacttggtaaacgatttggtacactt 26540898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 33190888 - 33190856
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaa 70  Q
    |||||||||||||||||||||||||||| ||||    
T  33190888 atcctaaccgctgcttacttttctgcaatcaaa 33190856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 13909076 - 13908856
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 125  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||  |||||  |||| ||||| ||    
T  13909076 gattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaagactttctaaccttt 13908977  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    | |||||||||||||||| ||||||||||||||||||| |||| |||| ||||||| ||||||  ||||||||||||| ||||||||| |||||||||||    
T  13908976 a-cttttatatcgtcaaaattacaaaaataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttattact 13908878  T
Q  226 tggtaaacaattcagtacactt 247  Q
    |||||||| |||  ||||||||    
T  13908877 tggtaaacgatttggtacactt 13908856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 51 - 247
Target Start/End: Complemental strand, 15164964 - 15164769
Alignment:
Q  51 cttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaaacttacaa 150  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| | || |||  ||||||| | |||||||||||||||||||||||||||||||||    
T  15164964 cttacttttctgcaaccaaaa-caggtaaacttgctctgttgcaaacaaataaaaattgcaactctctaacccttaacttttatatcgtcaaacttacaa 15164866  T
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||| |||||| |||| ||||||  ||||||  ||||||||||||| ||| ||||||| || |||||||||||||| |||  ||||||||    
T  15164865 aaataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacgatactctgcttattaattgattacttggtaaacgatttggtacactt 15164769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 232
Target Start/End: Complemental strand, 7582534 - 7582314
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||| | ||||| ||| ||||||||| ||||||| ||||||||||||||||||||||||||||| |||  |||||| |||| |||  |||||    
T  7582534 aatataaacagaggggattcaaagaatcctaaccactgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaa 7582435  T
Q  113 ctttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctact 210  Q
     |   ||| ||||  | ||||||||||||||||||||| |||||||||||  || ||| |||| |||||||||||||| ||||||||| |||| ||||||    
T  7582434 atcc-taagccttttatcttttatatcgtcaaacttaccaaaataagtaatgcagattgtttggacgaaacaacaatccatgtggatatgatactctact 7582336  T
Q  211 tattactttattacttggtaaa 232  Q
    ||| ||||||||||||||||||    
T  7582335 tatcactttattacttggtaaa 7582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 16730316 - 16730494
Alignment:
Q  67 caaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaa 166  Q
    ||||||||||||||||||||||| |||||| |||| |||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |     
T  16730316 caaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaactttctaacccttaacttttatattgtcaaacttacaaaaataagtaacgcgag 16730415  T
Q  167 ttatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacac 245  Q
    || |||| ||||||| | ||||  | ||||||||||| ||||||||| ||||| || ||| |||| | ||| |||||||    
T  16730416 ttgtttggacgaaacgaaaatccttttggatacgatactctacttatcactttctttcttcgtaagcgatttagtacac 16730494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 19562043 - 19562260
Alignment:
Q  19 aacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttat 118  Q
    |||||| | ||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||| |||  ||||| |  ||    
T  19562043 aacagaggggattcgaagaattctaaccgctgattacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattgcaattaaat 19562142  T
Q  119 aaccc--ttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttat 213  Q
    |||||  ||| |||   |||||  |||||||||| |||||||||||| ||||||| |||| | ||||| |||||   |||||| |||||| | |||||||    
T  19562143 aacccttttatcttttattataatgtcaaactta-aaaaataagtaatacaaattgtttggatgaaacgacaatacttgtggacacgatactttacttat 19562241  T
Q  214 tactttattacttggtaaa 232  Q
     ||||||||||||||||||    
T  19562242 cactttattacttggtaaa 19562260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 233
Target Start/End: Complemental strand, 17217031 - 17216833
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccc--ttaactt---tt 132  Q
    |||||||||| ||||||||||||| ||||||||| || |||||||||||||| |||||| |||| |||  ||||||||| ||||||  ||| |||   ||    
T  17217031 atcctaaccgttgcttacttttctacaaccaaaa-catgtaaacttgctctgttgcaaacagataaaaattgcaactttctaacccttttatcttgtatt 17216933  T
Q  133 atatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||| || |||||||||| |||||||||   |||| |||| ||||||| |||||| ||||||||| |||| ||||||||| |||||||| |||||||||    
T  17216932 atatcatc-aacttacaaatataagtaacgagaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcactttattgcttggtaaa 17216834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 19492574 - 19492797
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||  | ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| || |||||| | | ||||||         
T  19492574 aatataaacaggggggattcgaagaatcctaaccgccgcttacttttctgcaaccaaaaacatgtaaacttgctgtgttgcaaaca-aataaata----- 19492667  T
Q  113 ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 212  Q
      ||  ||||  |||||||||||| ||| ||| |||||||||||||||| | |||| |||| | ||||| |||||   ||||||||||||| ||||||||    
T  19492668 --ttgcaacc--taacttttatattgtc-aacctacaaaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctactta 19492762  T
Q  213 ttactttattacttggtaaacaattcagtacactt 247  Q
    |  |||||||||||||||||| |||  ||||||||    
T  19492763 tccctttattacttggtaaacgatttggtacactt 19492797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 17709975 - 17709759
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 125  Q
    ||||||||| |||||||| ||| ||||||||| ||||||| ||||||||||||||||||||| |||||| | || |||  | |||  |||| ||||||||    
T  17709975 gattcgaagaatcctaacagctacttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacatataaaaatttcaagtctttttaaccctt 17709877  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    | |||||||||||||||| ||| |||||||||||||   |||| |    || ||| |||||||  | ||||||| ||| ||||||||| |||||||||||    
T  17709876 atcttttatatcgtcaaa-ttataaaaataagtaacgagaattgt---gacaaaagaacaatccctatggatacaatactctacttatcactttattact 17709781  T
Q  226 tggtaaacaattcagtacactt 247  Q
    |||||||| |||  ||||||||    
T  17709780 tggtaaacgatttggtacactt 17709759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 13692558 - 13692766
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||  | ||||   || |||  |||||| | |||            
T  13692558 gattcgaagaatcctaactactgcttacttttctgcaaccaaaaacaggtaaacttgctcttttacaaactaataaaaattgcaacct-ata-------- 13692648  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
     ||||||| | |||| || ||||||||||||||||| |||| ||||  |||||| |||||| ||||||||| |||| ||||||||| |||||||||||||    
T  13692649 -ttttataccttcaacct-acaaaaataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttg 13692746  T
Q  228 gtaaacaattcagtacactt 247  Q
    |||||| |||  ||||||||    
T  13692747 gtaaacgatttggtacactt 13692766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 231
Target Start/End: Original strand, 17337012 - 17337216
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| ||| ||| | |||||||||||| ||||||||||||||||||||||||||||| || ||| |||| |||  ||||| | |  ||||||| |    
T  17337012 gattcgaagaatcataatctctgcttacttttatgcaaccaaaaacaggtaaacttgctctgttgtaaacagataaaaattgcaaatctcaaacccttta 17337111  T
Q  128 c-----ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 222  Q
    |     | |||||||||| ||||   ||||||||||||| |||||| |||| ||||||  ||||||| | ||||||||||| ||||||||| || |||||    
T  17337112 ctcttttattatatcgtc-aact---aaaaataagtaacgcaaattgtttggacgaaatgacaatctctttggatacgatactctacttatcacgttatt 17337207  T
Q  223 acttggtaa 231  Q
    ||| |||||    
T  17337208 actcggtaa 17337216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 21323873 - 21323972
Alignment:
Q  148 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||| | |||| |||| ||||||| ||||||||||||||||||||| |||||| || || |||||| ||||||||| ||| |||||||||    
T  21323873 caaaaataagtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctactgatcacattattatttggtaaacgatttagtacactt 21323972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 212
Target Start/End: Original strand, 17026221 - 17026394
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||| || ||||| |||||| |||| |||  |||||||            |    
T  17026221 gattcgaagaatcctaaccgctgcttacttgtctgcaaccaaaaacaggtaaatttactctgttgcaaacagataaaaactgcaactc-----------a 17026309  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 212  Q
    ||||||||  ||||||||||||||||||||||||   |||| ||   ||||||  |||||| ||||| |||||||| ||||||||    
T  17026310 cttttatactgtcaaacttacaaaaataagtaactagaattgttcccacgaaaggacaatccatgtgaatacgatactctactta 17026394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 11490648 - 11490534
Alignment:
Q  129 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 228  Q
    |||||||||||||||||    |||||||||||| | |||| |||| | ||||| ||||||  ||||||||||||| ||||||||| |||||||||||||     
T  11490648 ttttatatcgtcaaact----aaaataagtaacgcgaattgtttggaagaaactacaatccctgtggatacgatactctacttatcactttattacttga 11490553  T
Q  229 taaacaattcagtacactt 247  Q
    |||||||||  ||||||||    
T  11490552 taaacaatttggtacactt 11490534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 247
Target Start/End: Original strand, 13128768 - 13128971
Alignment:
Q  46 cgctgcttacttttctgcaacc-aaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttat---atcgtca 141  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||| | |||| | || |||  ||||||| | ||||||||| |||||||   || ||||    
T  13128768 cgctgcttacttttctgcaaccgaaaaacaggcaaacttactctgttccaaacaaataaaaattgcaactctctaacccttatcttttattatatggtca 13128867  T
Q  142 aacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagt 241  Q
    |   || ||||||||||||| | | || |||| ||||||| ||||||  | ||||||| ||| ||||||||| | ||||||||||||||||| |||  ||    
T  13128868 ac--taaaaaaataagtaacgcgagttgtttggacgaaacgacaatccctatggatacaatactctacttatcattttattacttggtaaacgatttggt 13128965  T
Q  242 acactt 247  Q
    ||||||    
T  13128966 acactt 13128971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 13992879 - 13992975
Alignment:
Q  153 ataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 249  Q
    ||||||||||| |||| |||| || |||| | |||| |||||||||||||| ||||||||  |||||||||||||||||||||||  ||||||||||    
T  13992879 ataagtaacacgaattgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattacttggtaaacaatttggtacacttac 13992975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 20315098 - 20315002
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||| |||||| |||| ||||||| ||||||  |||||||| |||||||||||||| | ||||||||||||||||| |||  ||||||||    
T  20315098 aaataagtaacgcaaattgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaacgatttggtacactt 20315002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 24639338 - 24639406
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||| ||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  24639338 gattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaa 24639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 17672101 - 17672004
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||| | | || |||  |||||||||||||| |||||||||| ||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  17672101 aaaataagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttattacttggtaaacgatttggtacactt 17672004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 11700571 - 11700666
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||| |||||||||||| ||| |||||||  ||||||| ||||||||||||| |||| |||| | |||||||||||||||||||||  ||||||||    
T  11700571 aaataggtaacacaaattgtttaaacgaaaagacaatct-tgtggatacgatactctatttatcattttattacttggtaaacaatttggtacactt 11700666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 20829739 - 20829835
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||  |||||| |||||||||||||||||||  ||||||||| ||| || | |||| ||||||||||||||||||| |||  ||||||||    
T  20829739 aaaataagtaatgcaaattttttgaacgaaacaacaatccttgtggatacaatactc-agttatcactttattacttggtaaacgatttggtacactt 20829835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 12406580 - 12406632
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  12406580 gattcgaagaatcctaaccgctgtttactttcctgcaaccaaaaacaggtaaa 12406632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 19882738 - 19882642
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||| | |||| |||| ||||||| |||||| |||| ||||||||| |||||| || ||||||||||||| ||||| |||  ||||||||    
T  19882738 aaataagtaacgcgaattgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataaacgattttgtacactt 19882642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 25098043 - 25097856
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||||||||| ||||||||  |||||||||||||||||| ||||| || ||| || |||| |||  ||||||           |||    
T  25098043 gattcgaagaatcctaaccgctgcatacttttcaacaaccaaaaacaggtaaatttgctttgttgccaacagataaaaattgcaac-----------taa 25097955  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattactt 226  Q
    |||| |||| |||||   || ||||||||||||||  |||| || | || ||| ||||||| |||||||||||||| |||||||| | ||||||||||||    
T  25097954 ctttaatattgtcaa--ctataaaaataagtaacatgaatttttcggacaaaagaacaatccatgtggatacgatactctacttactaactttattactt 25097857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 12578266 - 12578348
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||||||| ||| |||||| |||| || |||| |||||| |||||||||||||| |||| |||| ||||||||| ||||||||    
T  12578266 aaaataagaaacgcaaattgtttggacaaaacgacaatccatgtggatacgatactctaattatcactttattatttggtaaa 12578348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 5679304 - 5679207
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||| | |||| |||| ||||||||| | |  |||| ||||||||| |||||| || ||||||||||||||||||| |||  ||||||||    
T  5679304 aaaataagtaacgcgaattgtttggacgaaacaaaagttcatgtagatacgatactctactaatcactttattacttggtaaacgatttggtacactt 5679207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 14648993 - 14648897
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||| |  |||||  | ||||| ||||||  ||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  14648993 aaaataagtaacacgagctatttagaagaaacgacaatcc-tgtggatacgatactctacttatcactttattacttggtaaacgatttggtacactt 14648897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 248
Target Start/End: Complemental strand, 23080439 - 23080342
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactta 248  Q
    ||||||||||| |||||| ||||   ||||| |||||| ||||| |||| ||||||||||||| || |||||| ||||||||  ||| ||||||||||    
T  23080439 aaataagtaacgcaaattgtttggttgaaacgacaatccatgtgaatacaatattctacttatcaccttattatttggtaaattatttagtacactta 23080342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 24639466 - 24639535
Alignment:
Q  162 acaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    ||||||| |||| || |||| | |||| |||||||||||||| ||||||||| |||||||||||||||||    
T  24639466 acaaattgtttggacaaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaa 24639535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 25121104 - 25121175
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||| ||| ||||||||||| |||||| ||||    
T  25121104 gattcgaagaatcctaaccgctgcttacttttctgcaatc-aaaacgggt-aacttgctctgttgcaaacagat 25121175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 12406666 - 12406753
Alignment:
Q  127 acttttatatcgtcaaa-cttacaaaaataagtaacacaaattatttgaacg-aaacaacaatctatgtggatacgatattctactta 212  Q
    ||||||||||||||||| |||||||||||||||||||  |||| || | ||| ||| ||||||| ||||| | |||||||||||||||    
T  12406666 acttttatatcgtcaaaacttacaaaaataagtaacaagaattgttcggacgaaaagaacaatccatgtgcaaacgatattctactta 12406753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 22357533 - 22357634
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattc---tacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||| || | ||| || ||||| |||||| |||||||||||||| |    ||||||| ||||||||||||||||||  ||| |||||||||    
T  22357533 aaataagtaacacgaactgtttaaatgaaacgacaatccatgtggatacgatagtactttacttatcactttattacttggtaaatgatttagtacactt 22357632  T
Q  248 ac 249  Q
    ||    
T  22357633 ac 22357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 19929675 - 19929757
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||||||||||    |||||  ||||||| |||||| |||||||||||||| |||| |||| ||||| ||||||||||||    
T  19929675 aaaataagtaacacgggctatttagacgaaacgacaatccatgtggatacgatactctatttatcactttgttacttggtaaa 19929757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 25121227 - 25121308
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||| | |||| |||| ||||||| ||||||  ||||||||||||| | ||||||  |||||||||||||||||||    
T  25121227 aaataagtaacgcgaattgtttggacgaaaccacaatccttgtggatacgatactatactta-cactttattacttggtaaac 25121308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 43941812 - 43941874
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    |||||||||||||||||||||||| ||||   ||||||| ||||||||||||| |||| ||||    
T  43941812 acgaaacaacaatctatgtggataggataccttacttatcactttattacttgataaataatt 43941874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 17275890 - 17275833
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||||||||| | | |||||||||||||||| |||| ||||||||| ||||||||    
T  17275890 acgaaacaacaatttctatggatacgatattctaattatcactttattatttggtaaa 17275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 19092374 - 19092297
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| ||||||| |||||| ||||| || ||||| ||| ||||| ||||||||||||| |||||||||  ||||||||    
T  19092374 tttggacgaaacgacaatccatgtgaatgcgatactcttcttatcactttattacttgataaacaatttggtacactt 19092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 11935293 - 11935237
Alignment:
Q  14 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaa 70  Q
    ||||||| ||| | ||||||||| ||||||||| ||| |||||||||||||||||||    
T  11935293 atataaatagaggggattcgaagaatcctaaccactgattacttttctgcaaccaaa 11935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 15047219 - 15047144
Alignment:
Q  158 taacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||| || |||  ||||||| | |||| |||| ||||||||  ||||||||| |||||||||||||||||||    
T  15047219 taacacaagttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaac 15047144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 15107205 - 15107280
Alignment:
Q  158 taacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||| || |||  ||||||| | |||| |||| ||||||||  ||||||||| |||||||||||||||||||    
T  15107205 taacacaagttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaac 15107280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 40227988 - 40227925
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| | |||||| ||||    
T  40227988 atcctaaccgctgcttatttttcggcaacaaaaaataggtaaacttactccgttgcaaacagat 40227925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 22218630 - 22218687
Alignment:
Q  179 aacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    ||||||||||| | ||||||||||| ||||||||  ||||||||||||| |||||||||    
T  22218630 aacaacaatctttatggatacgatactctactta-cactttattacttgataaacaatt 22218687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 22526462 - 22526380
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||||||||| ||  ||||   ||||| |||||  |||||||||||||| ||||||||| ||||||||| ||| |||||    
T  22526462 aaataagtaacacagatggtttggttgaaacgacaattcatgtggatacgatactctacttatcactttattatttgataaac 22526380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 8969722 - 8969818
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||| |||| |||| ||||||| |||||||  || |||||| |  ||||||||  |||||||||||| ||||| ||||  ||||||||    
T  8969722 aaaataagtaacacgaattgtttggacgaaacgacaatctcagtagatacgttgctctactta-cactttattactttgtaaataatttggtacactt 8969818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 19900645 - 19900582
Alignment:
Q  183 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||| |||| ||| |||| ||||||||  |||||||||||||||||||||||  ||||||||    
T  19900645 acaatctttgtgaatatgatactctacttac-actttattacttggtaaacaatttggtacactt 19900582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 22175995 - 22176059
Alignment:
Q  183 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||| | ||||||| ||| ||||||||| ||||||||||||| ||||| |||  ||||||||    
T  22175995 acaatctctatggatacaatactctacttatcactttattacttgataaacgatttggtacactt 22176059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 17743339 - 17743573
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    ||||||||| || ||||||| ||  ||||||||||| |||| ||||||| ||||||||||||||||||||||||  | |||||| |||| |||  |||||    
T  17743339 aatataaacggaggagattcaaataatcctaaccgcggcttccttttctacaaccaaaaacaggtaaacttgcttagttgcaaaaagataaaaattgcaa 17743438  T
Q  113 ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 212  Q
    || | |||||||||||||||||||||| |||||| |||||||||||||||| |||| |||| ||||||| | |||| |||||||||||||| ||||||||    
T  17743439 ctctctaacccttaacttttatatcgttaaacttgcaaaaataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactctactta 17743538  T
Q  213 ttactttattacttggtaaacaattcagtacactt 247  Q
    | ||||||||||||||||||| |||  ||||||||    
T  17743539 tcactttattacttggtaaacgatttggtacactt 17743573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 27908996 - 27909216
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctt-- 125  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| |||| |||  |||||| || ||||||||      
T  27908996 gattcgaagaatcctaaccgctgcttaattttctgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacgttctaaccctttt 27909094  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    ||||||||||||||||||||||||||||||||||||   |||| |||| | ||||||| || | |||||||||||||| ||||||||| |||||||||||    
T  27909095 aacttttatatcgtcaaacttacaaaaataagtaacgtgaattgtttggatgaaacaataacccatgtggatacgatactctacttatcactttattact 27909194  T
Q  226 tggtaaacaattcagtacactt 247  Q
    |||||||| |||  ||||||||    
T  27909195 tggtaaacgatttggtacactt 27909216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 29719109 - 29719328
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| | | || |||  ||||||| | |||||||||     
T  29719109 gattcgaagaatcctaactgctgcttacttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgcaactctctaacccttat 29719208  T
Q  128 cttttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
     ||||||   | |||||||||   ||||||||||||| | |||| |||||||||||| ||||||  ||||||||||||| ||||||||| ||||||||||    
T  29719209 attttattataccgtcaaact---aaaaataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacgataatctacttatcactttattac 29719305  T
Q  225 ttggtaaacaattcagtacactt 247  Q
    ||||||||| |||  ||||||||    
T  29719306 ttggtaaacgatttggtacactt 29719328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 28925743 - 28925539
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataaccctta 126  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||| || |||||| | || |||  ||||| |||| ||||||||     
T  28925743 gattcgaagaatcctaacctctgcttacttttctgcaaccaaaa-caggtaaacttgctatgttgcaaacaaataaaaattgcaagctttctaacccttt 28925645  T
Q  127 a-cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    | ||||||||||||||||||||||||||||| |||||  |||| |||| ||||||| |||||| | |||||||| |   ||||||||| |||||||||||    
T  28925644 atcttttatatcgtcaaacttacaaaaataaataacatgaattgtttggacgaaacgacaatccacgtggatacaacgctctacttatcactttattact 28925545  T
Q  226 tggtaa 231  Q
    ||||||    
T  28925544 tggtaa 28925539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 43 - 247
Target Start/End: Original strand, 31804791 - 31804997
Alignment:
Q  43 aaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttat---atcgt 139  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  |||||| | || |||  ||||||| | ||||||||| |||||||   |||||    
T  31804791 aaccgctgcttacttttctgcaaccaaaaacaggtaaatttgctttattgcaaacaaataaaaattgcaactctctaacccttatcttttattatatcgt 31804890  T
Q  140 caaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattca 239  Q
    ||| ||||||||||||||||||||| |||  ||| |||||||  |||||| ||||||||| ||| ||||||||| ||||||||| |||||||||||||      
T  31804891 caa-cttacaaaaataagtaacacagattggttggacgaaacggcaatctctgtggatacaatactctacttatcactttattatttggtaaacaatttg 31804989  T
Q  240 gtacactt 247  Q
    ||||||||    
T  31804990 gtacactt 31804997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 232
Target Start/End: Complemental strand, 15339475 - 15339255
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||| ||| | |||| |||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| |||||| | || |||  |||||    
T  15339475 aatataaatagaggggatttgaagaatcctaactgctgcttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaa 15339376  T
Q  113 ctttataacccttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctac 209  Q
    || | ||||||||| |||   ||||||| |  ||||||| ||| |||||||| | |||| |||| ||||||| |||||| ||||||||| |||| |||||    
T  15339375 ctctctaacccttatcttttattatatcct-taacttac-aaagtaagtaacgctaattgtttggacgaaacgacaatccatgtggatatgatactctac 15339278  T
Q  210 ttattactttattacttggtaaa 232  Q
    || | ||||||||||||||||||    
T  15339277 ttttcactttattacttggtaaa 15339255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 232
Target Start/End: Complemental strand, 30411889 - 30411695
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||  |||||          | ||     
T  30411889 gattcgaaaaatcctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa----------cctat 30411800  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    ||||||||  |||||| ||||||||||||||||| |||||| || | ||||||  ||||||  ||| ||||||||| ||||||||| |||||||||| ||    
T  30411799 cttttatactgtcaaaattacaaaaataagtaacgcaaattgttgggacgaaatgacaatccctgttgatacgatactctacttatcactttattacatg 30411700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 17349585 - 17349362
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||| ||| | ||||||||| || || |||||||||||||||| |||||||||||||| |||||||||||||| |||||| |||| |||  |||      
T  17349585 aatataaatagaggggattcgaagaattctgaccgctgcttacttttttgcaaccaaaaacaagtaaacttgctctgttgcaaacagataaaaattgc-- 17349488  T
Q  113 ctttataacccttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctac 209  Q
          |||||||| |||   |||||||||| ||||||| |||||||||||| | || | |||| ||||||| ||||||| ||||||||||||| |||||    
T  17349487 ------aacccttatcttttattatatcgtc-aacttac-aaaataagtaacgcgaaatgtttggacgaaacgacaatctttgtggatacgatactctac 17349396  T
Q  210 ttattactttattacttggtaaacaattcagtaca 244  Q
    |||  ||||||||||||||||||| ||| ||||||    
T  17349395 tta-cactttattacttggtaaacgatttagtaca 17349362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 233
Target Start/End: Complemental strand, 25196229 - 25196026
Alignment:
Q  31 tcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataacccttaac 128  Q
    |||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||| || |||||| | || |||  | |||  |||| ||||| |||||    
T  25196229 tcgaagaatcctaaccactgcttacttttttgcaaccaaaa-caggtaaacttgctatgttgcaaacatataaaaatttcaagtctttttaaccattaac 25196131  T
Q  129 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 228  Q
    || |||||||||||  | | |||||||||||||   |||| |||| ||||||  |||| |  |||||||| |||| ||||||||| ||||||||||||||    
T  25196130 ttatatatcgtcaacttaataaaaataagtaacgtgaattgtttggacgaaaggacaacccctgtggatatgatactctacttatcactttattacttgg 25196031  T
Q  229 taaac 233  Q
    |||||    
T  25196030 taaac 25196026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 24090905 - 24091003
Alignment:
Q  129 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    ||||||| ||||||||||||||||||||||||||  |||| |||| ||||||  |||||| ||||||||||||||||||| |||| |||||||||||||    
T  24090905 ttttataccgtcaaacttacaaaaataagtaacaagaattgtttggacgaaaggacaatccatgtggatacgatattctatttatcactttattacttg 24091003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 29143184 - 29142983
Alignment:
Q  15 tataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 114  Q
    |||| ||||| | ||||||||| ||| ||||||||| |||||||||| |||||||||  |||||||||||||||| |||||| |||| |||  |||||||    
T  29143184 tatatacagaggggattcgaagaatcttaaccgctgtttacttttctacaaccaaaat-aggtaaacttgctctgttgcaaacagataaaaattgcaact 29143086  T
Q  115 ttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttatt 214  Q
               |||||||||| ||||||||||||||||||||||||| | |||| || |||||||   |||||| ||||||||||| || |||||||||     
T  29143085 a----------aacttttataccgtcaaacttacaaaaataagtaacgcgaattgttcgaacgaacggacaatccatgtggatacggtactctacttatc 29142996  T
Q  215 actttattacttg 227  Q
      |||||||||||    
T  29142995 gttttattacttg 29142983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 249
Target Start/End: Complemental strand, 32085673 - 32085463
Alignment:
Q  39 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact-------tt 131  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||| |||| |||  ||||| | | |||| |||||||       ||    
T  32085673 tcctaaccgctgcttacttttctgcaaccaaac-caggtaa-cttgctctgttgcaaacagataaaaattgcaa-tctctaactcttaactcttttattt 32085577  T
Q  132 tatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    ||||||||||| ||||   ||||||||||||| |  | |||  ||||||| |||||| ||||||||| |||| ||||||||| |||||||||||||||||    
T  32085576 tatatcgtcaa-ctta---aaataagtaacacgagctgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaa 32085481  T
Q  232 acaattcagtacacttac 249  Q
    ||||||  ||||||||||    
T  32085480 acaatttggtacacttac 32085463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 233
Target Start/End: Original strand, 17635665 - 17635858
Alignment:
Q  41 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac-tttataaccctt--aacttttatatc 137  Q
    ||||| |||| ||| || ||||||||||||| ||||||||||||||||| |||||| |||| |||  |||||| ||| ||||||||  | |||||| |||    
T  17635665 ctaactgctgtttatttatctgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaacccttttatcttttacatc 17635763  T
Q  138 gtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||| ||||||||||||||||||   | || |||  ||||||| ||||||| |||||||| |||  ||||||| |  ||||||||||||||||||    
T  17635764 gtcaa-cttacaaaaataagtaacgtgagtttttttgacgaaacgacaatctctgtggatatgattctctacttttctctttattacttggtaaac 17635858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 25618777 - 25618574
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| || | ||||||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||| |||  ||||| | | ||||  || |    
T  25618777 gattcgaagaattcgaaccgctgcttacttttctgcaacc-aaaacaggtaaactttctctgttgcaaacagataaaaattgcaaatctctaacttttca 25618679  T
Q  128 c-----ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 222  Q
    |     | |||||||||| ||||   |||||||||| || | |||| |||  ||||||| |||||| ||||||||| |||| ||||||||| ||||||||    
T  25618678 ctcttttattatatcgtc-aact---aaaaataagttacgcgaattgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttatt 25618583  T
Q  223 acttggtaa 231  Q
    |||||||||    
T  25618582 acttggtaa 25618574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 233
Target Start/End: Original strand, 17675519 - 17675713
Alignment:
Q  41 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataaccc--ttaacttttatatc 137  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||| |||| |||  ||||| |||| ||||||  ||| |||||| |||    
T  17675519 ctaaccgctgtttatttttctgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaacccttttatcttttacatc 17675617  T
Q  138 gtcaaacttacaaaaataagtaac-acaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||| ||||||||||||||||||||   |  || |||  ||||||| ||||||| ||| |||| |||  ||||||| |  ||||||||||||||||||    
T  17675618 gtc-aacttacaaaaataagtaacgtgagttttttttgacgaaacgacaatctctgttgatatgattctctacttttctctttattacttggtaaac 17675713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 26603237 - 26603309
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||    
T  26603237 gattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaac-tgctctgttgcaaacagat 26603309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 45621880 - 45621978
Alignment:
Q  149 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||||| |||| |||| ||||||| ||||||  ||| ||||||||| ||||||| | ||||||||||||||||||| |||  ||||||||    
T  45621880 aaaaataagtaacacgaattgtttggacgaaacgacaatccttgtagatacgatactctacttctcactttattacttggtaaacgattttgtacactt 45621978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 20174635 - 20174732
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||  |||| |||| ||||||| |||||| ||||||| | |||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  20174635 aaaataagtaacatgaattgtttggacgaaacgacaatccatgtggaaatgatactctacttatcactttattacttggtaaacgatttggtacactt 20174732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 17198078 - 17198010
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| |||| || | |||||||||||||    
T  17198078 gattcgaagaatcttaaccgctgcttacttttctgcaaccaaaaataggtgaattcgctctgctgcaaa 17198010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 25535483 - 25535296
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||| |||||||| |  | ||| ||||||||||| |||  ||||||||           |    
T  25535483 gattcgaagaatcccaaccgctgcttacttttttgcaaccaaaa-caggtaaattcacgctgttgcaaatagataaaaattgcaactt-----------a 25535396  T
Q  128 cttttatatcgtcaaactt-acaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    |||||| | ||||||| || ||||||||||||||||  |||| || | ||||||  ||||||  ||||||||||||| ||||||||| ||||||||||||    
T  25535395 ctttta-accgtcaaagttcacaaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctacttatcactttattactt 25535297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 25888247 - 25888317
Alignment:
Q  177 gaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||| |||||| |||||||||||||| | ||||||| |||||||||||||||||||||||  ||||||||    
T  25888247 gaaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacaatttggtacactt 25888317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 26667516 - 26667464
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  26667516 gattcgaagaatcctaaccgctgtttacttttctgcaaccgaaaacaggtaaa 26667464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 233
Target Start/End: Original strand, 11382654 - 11382836
Alignment:
Q  52 ttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact--tttat---atcgtcaaactt 146  Q
    |||||||||| |||| ||||||| |||| ||||||||| |||||| |||| |||| ||||| | | ||||  ||||||  |||||   |||||||||||     
T  11382654 ttacttttctacaacaaaaaacaagtaa-cttgctctgttgcaaacagataaaatttgcaaatctctaacttttaactcttttatcttatcgtcaaact- 11382751  T
Q  147 acaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
      ||||||||||||| | ||||||||| | ||||  |||||  ||||||||| |||| ||||||||| |||||||||  ||||||||    
T  11382752 --aaaaataagtaacgcgaattatttggatgaaaatacaattcatgtggatatgatactctacttatcactttattatctggtaaac 11382836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 12953293 - 12953376
Alignment:
Q  149 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||||||||| | |||| |||  ||||||| |||||| ||||||| || ||| ||||||||||||||||||||||| ||||    
T  12953293 aaaaataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctacttattactttattacttgataaa 12953376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 25530657 - 25530571
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactt 115  Q
    ||||||||| ||||||||||||||||||| || ||||||| |||||||||||| | |||||| |||||| |||| |||  ||||||||    
T  25530657 gattcgaagaatcctaaccgctgcttactattttgcaacc-aaaacaggtaaattcgctctgttgcaaacagataaaaattgcaactt 25530571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 212
Target Start/End: Complemental strand, 25920455 - 25920303
Alignment:
Q  48 ctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaaactta 147  Q
    ||||| ||||||||||||||||||||||||||| | |||||| |||||| |||| |||  ||||||           |||||||||||  ||| ||||||    
T  25920455 ctgctcacttttctgcaaccaaaaacaggtaaaatcgctctgttgcaaacagataaaaattgcaac-----------taacttttataatgtc-aactta 25920368  T
Q  148 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 212  Q
    ||||||||||||||   |||| || | ||||||  |||||| |||||||||||||| ||||||||    
T  25920367 caaaaataagtaacgagaattgttcggacgaaaggacaatccatgtggatacgatactctactta 25920303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 8447083 - 8447146
Alignment:
Q  183 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||||| |||  ||||||||    
T  8447083 acaatccatgtggatacgataatctactta-tactttattacttggtaaacgatttggtacactt 8447146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 12953225 - 12953289
Alignment:
Q  32 cgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||| ||| ||| || |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  12953225 cgaagaatcgtaatcgttgcttacttttctgcaaccaaaaacatgtaaacttgctatgttgcaaa 12953289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 24090816 - 24090867
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  24090816 gattcgaagcatcctaaccactgcttacttttctgcaacc-aaaacaggtaaa 24090867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 29027595 - 29027512
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||||||| ||||||||||| || ||||||||||  ||||| |||| ||| ||| || || ||||||||| |||||||||    
T  29027595 aaaataagtaacgcaaattatttgcacaaaacaacaattcatgtgaatacaatactctgctcatcactttattatttggtaaac 29027512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 30900848 - 30900931
Alignment:
Q  154 taagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    |||||||| | |||| |||  ||||||||||||| || |||||||| ||| |||| |||| ||||||||| |||||||||||||    
T  30900848 taagtaacgcgaattgtttagacgaaacaacaatatacgtggatacaatactctagttatcactttattatttggtaaacaatt 30900931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 25887781 - 25887853
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    |||| |||| ||| ||| ||||| ||||||||||||||||||||| |||| ||||||||||| |||||| ||||    
T  25887781 gatttgaagaatcataatcgctggttacttttctgcaaccaaaaataggt-aacttgctctgttgcaaacagat 25887853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 9774334 - 9774414
Alignment:
Q  149 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    ||||||||||||| ||||||  ||| || |||| |||||| |||||||||||||| |||||  || |||||||| ||||||||    
T  9774334 aaaaataagtaacgcaaattggttggacaaaacgacaatccatgtggatacgatactctac--atcactttattccttggtaa 9774414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 25885460 - 25885542
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||||||||||| |||| ||||||| |||||   ||||||||||||| | | ||||| || ||||||||| ||||||    
T  25885460 aaaataagtaacacaaattgtttggacgaaacgacaattcttgtggatacgatactattcttatcac-ttattactttgtaaac 25885542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 26603348 - 26603447
Alignment:
Q  148 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||||   |||| |||| ||||||  |||||| || |  |||||||| ||||||||| ||||| ||||||| |||||||||  ||||||||    
T  26603348 caaaaataagtaacgtcaattgtttgcacgaaaagacaatccatataaatacgatactctacttatcacttttttacttgataaacaatttggtacactt 26603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 8503103 - 8503167
Alignment:
Q  183 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||| ||||||||| |||  ||||||||| || |||||||||||||||| |||  ||||||||    
T  8503103 acaatccatgtggatatgatcctctacttatcacgttattacttggtaaacgatttggtacactt 8503167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 23011764 - 23011859
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||| |||| |||||| |||  || |||| ||||||  ||||||||| ||| ||||||||  |||||||||||||||||| ||||  ||||||||    
T  23011764 aaataaataacgcaaattgtttagacaaaacgacaatccttgtggatacaataatctacttac-actttattacttggtaaaaaatttggtacactt 23011859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 25530505 - 25530469
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttg 227  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  25530505 tgtggatacgatactctacttatcactttattacttg 25530469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 27418465 - 27418389
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    |||||||||||||| |||| ||||   ||||  | |||| ||||||||| |||| ||||||||| ||||||||||||    
T  27418465 aaaataagtaacacgaattgtttggttgaaatgataatccatgtggatatgatactctacttatcactttattactt 27418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 45553228 - 45553132
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||| |||||| ||||  ||| || |||| ||||||  |||  |||||||||| ||||||| ||||||||||||| ||||| |||  ||||||||    
T  45553228 aaataattaacacgaattgcttggacaaaacgacaatccctgtaaatacgatattttacttatcactttattacttgataaacgatttggtacactt 45553132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 33 - 247
Target Start/End: Original strand, 29382243 - 29382458
Alignment:
Q  33 gaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaacttt 131  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||| || |||||| |||| |||  ||||| |||| ||||| ||||||||    
T  29382243 gaagaatcctaaccactgcttacttttctgcaaccaaaaataggtacacttgctatgttgcaaacagataaaaattgcaagctttctaaccattaacttt 29382342  T
Q  132 tatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    |||||||||||||||||||||||||||||| |||||| |||| | ||||| ||||||  ||||||||||||| ||||||||| |||||||||||||||||    
T  29382343 tatatcgtcaaacttacaaaaataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttggtaa 29382442  T
Q  232 acaattcagtacactt 247  Q
    || |||  ||||||||    
T  29382443 acgatttggtacactt 29382458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 24114161 - 24114379
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac-tttataaccctta 126  Q
    ||||||||| ||||||||||||||||||||||| |  ||||||| |||||||||||||||||||||||| |||| |||  |||||| |||||||||||||    
T  24114161 gattcgaagaatcctaaccgctgcttacttttcagataccaaaa-caggtaaacttgctctgctgcaaacagataaaaattgcaacctttataaccctta 24114259  T
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
     ||||||||||||||| |||||||||||||||||| ||| || |||| ||||||| ||||||  || |||||||||| ||||||||| | ||||||||||    
T  24114260 tcttttatatcgtcaa-cttacaaaaataagtaacgcaagttgtttggacgaaacgacaatccctgcggatacgatactctacttatcattttattactt 24114358  T
Q  227 ggtaaacaattcagtacactt 247  Q
    |||||||||||  ||||||||    
T  24114359 ggtaaacaatttggtacactt 24114379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 24269833 - 24269600
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||  | ||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||| ||   |||||    
T  24269833 aatataaacaggggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaac-tactctgttgcaaacagataaagattgcaa 24269735  T
Q  113 ct-ttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactt 211  Q
    || ||  ||| ||||  ||||||| |||||||||||||||||||| |||    |||| |||| ||||||| ||||||  ||||||||||||| |||||||    
T  24269734 ctattcaaactcttattttttataccgtcaaacttacaaaaataaataatgtgaattgtttggacgaaacgacaatccctgtggatacgatactctactt 24269635  T
Q  212 attactttattacttggtaaacaattcagtacactt 247  Q
    |  |||||||||||||||||| ||||  ||||||||    
T  24269634 a-cactttattacttggtaaataatttggtacactt 24269600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 226
Target Start/End: Complemental strand, 27659642 - 27659468
Alignment:
Q  43 aaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaa 142  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||  |||||||||||||||  ||||||        ||||| |||||||||||||||    
T  27659642 aaccgctgcttaattttctgcaacaaaaaacaggtaaacttgctcttttgcaaatagattaaaattgcaac--------ccttatcttttatatcgtcaa 27659551  T
Q  143 acttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
     |||||||||||||||||| |  | | |||| ||||||| ||||||  ||| ||||||||| ||||||||| ||||||||||||    
T  27659550 -cttacaaaaataagtaactcggaatgtttggacgaaacgacaatccttgtagatacgatactctacttatcactttattactt 27659468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 232
Target Start/End: Original strand, 13314869 - 13315074
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||||||||||| ||| || | |||||| | || |||  ||||||| | ||||  |||     
T  13314869 gattcgaagaatcttaaccgttgcttacttttctgcaaccaaaaacaggtaaatttgttcagttgcaaacatataaaaattgcaactctctaacgtttat 13314968  T
Q  128 ctt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    |||   |||||||||| ||||||  |||||||||||| | |||| |||| ||||||||| |||| |||||||||||||| | ||||||| ||||||||||    
T  13314969 cttttattatatcgtc-aactta-taaaataagtaacgcgaattgtttggacgaaacaaaaatccatgtggatacgatactatacttatcactttattac 13315066  T
Q  225 ttggtaaa 232  Q
    ||||||||    
T  13315067 ttggtaaa 13315074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 17509447 - 17509266
Alignment:
Q  47 gctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataacccttaacttttatatcgtcaaact 145  Q
    ||||||||||||| |||||| |||||||||||||||||||||  |||||| || | |||  ||||| | || |||||||||| ||||||| |||||| ||    
T  17509447 gctgcttacttttttgcaac-aaaaacaggtaaacttgctctattgcaaacaggtgaaaattgcaagtcttttaacccttaatttttataccgtcaa-ct 17509350  T
Q  146 tacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggt 229  Q
    || ||||||||||||    |||| |||| |||||| ||||||| ||||||||| |||| ||||||||| |||||||||||||||    
T  17509349 tataaaaataagtaaagagaattgtttggacgaaagaacaatccatgtggatatgatactctacttatcactttattacttggt 17509266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 18448433 - 18448624
Alignment:
Q  42 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataacccttaa-cttttatatcg 138  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||| |||| |||  |||||  |||| ||||| || | |||||||||||    
T  18448433 taaccgttgcttacttttatgcaaccaaaaacaggtaa-cttgctctgttgcaaacagataaaaactgcaagactttctaaccatttatcttttatatcg 18448531  T
Q  139 tcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||| |||| |||||||||||||   |||| |||| || |||| ||||||| | | ||||||||  |||| |||||||||||||||||||||||    
T  18448532 tcaa-cttataaaaataagtaacgagaattgtttggacaaaacgacaatctctattgatacgatgctctaattattactttattacttggtaaa 18448624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 233
Target Start/End: Original strand, 17101792 - 17101976
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatc 137  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||| |||||| |||| |||  || ||| |          | |||||||| |    
T  17101792 atcctaaccactgcttacttttttgcaatcaaaaacaggtaaacttgctctgttgcaaacagataaaaattggaacct----------atcttttatacc 17101881  T
Q  138 gtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||| |||||||| |||||||||||| ||| |||| | ||||| ||||||  | ||||||||||| ||||||||| |||||||||||||||||||    
T  17101882 gtcaa-cttacaaatataagtaacacatattgtttggatgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaac 17101976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 24110532 - 24110670
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||  | ||||||||  ||||||||| |||||||||||||||||||| ||||||| ||||||| ||||| |||||| |||| |||| |||||    
T  24110532 aatataaacaggggggattcgaataatcctaacccctgcttacttttctgcaacc-aaaacagataaacttcctctgttgcaaacagataaaat-tgcaa 24110629  T
Q  113 c-tttataacccttaacttttatatcgtcaaacttacaaaaa 153  Q
    | ||| |||||||||  |||||||||||| ||||||||||||    
T  24110630 cttttctaacccttatgttttatatcgtc-aacttacaaaaa 24110670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 247
Target Start/End: Complemental strand, 25226272 - 25226138
Alignment:
Q  112 actttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactt 211  Q
    ||||| ||||||||| |||||||||| ||||||||| ||||||| ||||| |||||| |||| | ||||||| ||||  |||  |||||||| || ||||    
T  25226272 actttctaaccctta-cttttatatcttcaaacttataaaaatatgtaacgcaaattgtttggaggaaacaataatccctgtatatacgatactcaactt 25226174  T
Q  212 attactttattacttggtaaacaattcagtacactt 247  Q
    || ||||||||||||| ||||| ||| |||||||||    
T  25226173 atcactttattacttgataaacgatttagtacactt 25226138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 23893083 - 23893278
Alignment:
Q  20 acagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttata 119  Q
    ||||||| ||||| ||| ||||||||  ||  |||||||||||||||||||| |||||||| ||||| || |||||| |||| |||  ||||||| |       
T  23893083 acagatgggattcaaagaatcctaactactagttacttttctgcaaccaaaa-caggtaaatttgctttgttgcaaacagataaaaattgcaactat--- 23893178  T
Q  120 acccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattacttt 219  Q
            |||||||| ||||||||||||||||||||||||||  |||| || | || ||| |||||||||||| |||| |||| ||||||||| ||||     
T  23893179 --------cttttataccgtcaaacttacaaaaataagtaacaagaattgttcggacaaaagaacaatctatgttgatatgatactctacttatcacttc 23893270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 5851039 - 5850943
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||  ||| ||||   ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  5851039 aaataagtaacacggattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgattaggtacactt 5850943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 26394576 - 26394643
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||||    
T  26394576 gattcgaagaatcctaaccgttgcttacttttctgcaacc-aaaacaggtaaacttgctttgttgcaaa 26394643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 14528228 - 14528165
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||| ||||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  14528228 tttggacgaaacgacaatctatgtggatacgatactctacgtatcactttattacttggtaaac 14528165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 2637672 - 2637610
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    ||||||| |||||| |||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  2637672 acgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataaacaatt 2637610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 30783774 - 30783824
Alignment:
Q  183 acaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  30783774 acaatctatgtggatacgatactctacttatcactttattacttggtaaac 30783824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 14626241 - 14626191
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctct 88  Q
    |||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  14626241 atcctaactgctgcttacttttctgcaaccaaaaaaaggtaaacatgctct 14626191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 25182316 - 25182377
Alignment:
Q  39 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    |||||||| ||| || ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  25182316 tcctaaccactgtttccttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagat 25182377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 14075692 - 14075611
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||||||| || ||| ||||   ||||| |||||| |||||||||||||| ||||||||| ||||| ||||||||||||    
T  14075692 aaataagtaacgcacattgtttggttgaaacgacaatccatgtggatacgatagtctacttatcactttcttacttggtaaa 14075611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 15238896 - 15238811
Alignment:
Q  152 aataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    |||||||||| | |||| |||  ||||||| |||||  |||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  15238896 aataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctacttatcattttcttacttggtaaacaatt 15238811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 19264237 - 19264064
Alignment:
Q  44 accgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaaa 143  Q
    |||||||||||| ||| | |||||||||| || ||||||||||||| |||||| |||| |||  | |||          ||||||||||||| | |||||    
T  19264237 accgctgcttaccttttttcaaccaaaaatagataaacttgctctgttgcaaaaagataaaaattacaa----------cttaacttttataacatcaaa 19264148  T
Q  144 cttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    ||||||||||||||||||   ||||| ||  | |||| ||||||| || || |||||||| |  |||||| |||||||||||||    
T  19264147 cttacaaaaataagtaacgagaattaatttgatgaaagaacaatccatatgaatacgatacttaacttatcactttattacttg 19264064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 6885069 - 6884960
Alignment:
Q  134 tatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||||||   ||||||||| | ||| || |||| ||||||| |||||| |||| ||||||||| || |||||| ||||||||||| |||| ||    
T  6885069 tatcgtcaaactta---aaataagtagcgcaagttgtttggacgaaacgacaatccatgtagatacgatactc-acttatcactttattactgggtacac 6884974  T
Q  234 aattcagtacactt 247  Q
     ||| |||||||||    
T  6884973 gatttagtacactt 6884960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 17976693 - 17976636
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||| | ||||| ||||||||||||| ||||||||| ||||||||||||| ||||    
T  17976693 acgaaacgaaaatctttgtggatacgatactctacttatcactttattacttgataaa 17976636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 18569284 - 18569204
Alignment:
Q  20 acagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||| ||||||| ||  ||| |||||||||||||||||||||||||| |||||| ||||||| ||| || |||||| ||||    
T  18569284 acagacgagattcaaaaaatcgtaaccgctgcttacttttctgcaacc-aaaacaagtaaactcgctatgttgcaaacagat 18569204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 24645042 - 24644989
Alignment:
Q  48 ctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||||||||||||||||||||||||||||  ||| | || |||||||||||    
T  24645042 ctgcttacttttctgcaaccaaaaacaggtaactttgttatgttgcaaatagat 24644989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 16404020 - 16403952
Alignment:
Q  141 aaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctac 209  Q
    ||||||||||||||||||||||  |||| || | ||||||  |||||| |||||||||||||| |||||    
T  16404020 aaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 16403952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 16404122 - 16404055
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||||||| ||||||||||||||||| ||||||||| || |||| ||||||| | |||||| ||||||    
T  16404122 gattcgaagaatcctaaccgctgcttatttttctgcagcc-aaaataggtaaattcgctctgttgcaaa 16404055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 34497194 - 34497131
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||| ||||||| ||| ||| | ||||||||||| |||||| || |||||||||||||||||||    
T  34497194 tttggacgaaacgacagtctctatggatacgatactctactaatcactttattacttggtaaac 34497131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 44010903 - 44010968
Alignment:
Q  30 ttcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||||| ||| |||||||| |||||| ||||||||||||||||| || |||||| |||| ||||||    
T  44010903 ttcgaagaatcttaaccgctacttactcttctgcaaccaaaaacatgt-aacttgttctgttgcaaa 44010968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 44011049 - 44011106
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||| |||||| |||||||||||||| ||||||||  |||||||||||| ||||||    
T  44011049 acgaaacgacaatccatgtggatacgatactctactta-cactttattacttcgtaaac 44011106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 21314834 - 21314785
Alignment:
Q  39 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctct 88  Q
    ||||||||||| ||||||||| || ||| ||||||||| |||||||||||    
T  21314834 tcctaaccgctacttacttttatgtaactaaaaacaggcaaacttgctct 21314785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 24110696 - 24110737
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||||||||| ||||||||| | ||||||||||||||||    
T  24110696 tgtggatacgatactctacttatcattttattacttggtaaa 24110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 30806475 - 30806573
Alignment:
Q  129 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatg-----tggatacgatattctacttattactttatta 223  Q
    |||||||||||||||||    |||||||||||| |||||| |||| | ||||| ||||||  ||     ||||||||||| ||||||||| |||||||||    
T  30806475 ttttatatcgtcaaact----aaaataagtaacgcaaattgtttggatgaaacgacaatccttgtggactggatacgatactctacttatcactttatta 30806570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 34497327 - 34497295
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaa 70  Q
    |||||||||||||||||||||||||||| ||||    
T  34497327 atcctaaccgctgcttacttttctgcaagcaaa 34497295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 27737566 - 27737786
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||| |||| |||  ||||||| | |||||||||     
T  27737566 gattcgaagaatcctaaccgctgcttacttttttgcaac-aaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaactctctaacccttat 27737664  T
Q  128 cttttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    |||| ||   |||||||| |||||||||||||||||| | |||| |||| ||||||||||||||  ||||| || |||| ||||||||| ||||||||||    
T  27737665 ctttcattttatcgtcaa-cttacaaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactctacttatcactttattac 27737763  T
Q  225 ttggtaaacaattcagtacactt 247  Q
    ||||||||| ||| |||||||||    
T  27737764 ttggtaaacgatttagtacactt 27737786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 26 - 233
Target Start/End: Complemental strand, 5624864 - 5624656
Alignment:
Q  26 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac-tttataaccct 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| |||||  | |||| |||| |||  |||||| ||| |||||||    
T  5624864 gagattcgaagaatcctaaccgctgcttacttttctgcaaccaaaagccggtaaact-gctctattacaaacagataaaaattgcaacctttctaaccct 5624766  T
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctat-gtggatacgatattctacttattactttatta 223  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||| || |||| ||||||| |  || ||| |||| ||||||||| |||||||||    
T  5624765 taacttttctatcgtcaaacttacaaaaataagtaacgcaaattgtttgcacaaaacgacaatctctattgtataagatactctacttatcactttatta 5624666  T
Q  224 cttggtaaac 233  Q
    ||||||||||    
T  5624665 cttggtaaac 5624656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 23844327 - 23844563
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||  | ||||||||  |||||||||||||||||||||| ||||||||||| |||||||||||| |||  |||||| |||| |||  |||||    
T  23844327 aatataaacaggagggattcgaaaaatcctaaccgctgcttacttttatgcaaccaaaa-caggtaaacttggtctattgcaaacagataaaaattgcaa 23844425  T
Q  113 c-tttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctac 209  Q
    | ||| ||||||||  | ||||||||||||||| |||||||||||||||||| | | || |||| ||||||| ||||||  | | |||| |||| |||||    
T  23844426 catttctaacccttttatcttttatatcgtcaa-cttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatactctac 23844524  T
Q  210 ttattactttattacttggtaaacaattcagtacactta 248  Q
    |||| | ||||||||||||||||| |||  |||||||||    
T  23844525 ttatcattttattacttggtaaacgatttggtacactta 23844563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 14637090 - 14636948
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat-taaatatgcaactttataaccctt- 125  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| || ||  ||||  ||| ||||| |||| ||||||||     
T  14637090 gattcgaagaatcctattcgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgtaataagataaaaaaatgcatctttctaaccctta 14636991  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaatt 168  Q
    || ||||||||||||||||||| ||||||||||||||| ||||    
T  14636990 aaattttatatcgtcaaacttataaaaataagtaacacgaatt 14636948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 23231862 - 23232066
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataaccctta 126  Q
    ||||||||| ||||||| || |||||||||||||  |||||||| || ||||| |||||||| |||||| |||| |||| |||||   || ||||| |||    
T  23231862 gattcgaagaatcctaaacgttgcttacttttctataaccaaaa-caagtaaatttgctctgttgcaaacagataaaat-tgcaagacttctaaccgtta 23231959  T
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||| ||||| | |||||   | |||||| ||||  |||||||| ||||||||||||    
T  23231960 acttttatatcgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgataccctacttatcactttattactt 23232059  T
Q  227 ggtaaac 233  Q
    |||||||    
T  23232060 ggtaaac 23232066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 38 - 247
Target Start/End: Complemental strand, 9516997 - 9516787
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac-tttataaccctt--aacttttat 134  Q
    |||||||  |||||||| |||||||||| |||||  ||||||||||||| || ||| || |||| |||  | |||| ||| ||||||||  | |||||||    
T  9516997 atcctaatggctgcttaattttctgcaatcaaaat-aggtaaacttgctatgttgctaacagataaaacttacaacctttctaacccttttatcttttat 9516899  T
Q  135 atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaaca 234  Q
    |||||||| |||||||||||||||||| | | || |||| ||||||| |||||| |||||||||||||| ||||||||| ||||||||||| |||||||     
T  9516898 atcgtcaa-cttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggtaaacg 9516800  T
Q  235 attcagtacactt 247  Q
    |||  ||||||||    
T  9516799 atttggtacactt 9516787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 226
Target Start/End: Original strand, 17826986 - 17827168
Alignment:
Q  41 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataacccttaacttttatatcgt 139  Q
    ||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||| | || |||  ||||||| || ||||||||| ||||||||| ||    
T  17826986 ctaaccgttgcttacttttctgcaaccaaaaacaagtaaact-gctatgttgcaaacatataaaaattgcaactcttttaacccttatcttttatattgt 17827084  T
Q  140 caaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    ||||   | ||||||||||||| | |||| |||| | ||||| |||||| |||||||||||||| |||| |||| ||||||||||||    
T  17827085 caaa---aaaaaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactctatttataactttattactt 17827168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 27124372 - 27124589
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataaccctta 126  Q
    ||||| ||| ||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||| | || |||  || || | || |||||||||    
T  27124372 gattcaaagaatcttaaccgctgcttacttttctgcaacc-aagacaggtaaacttgctctgttgcaaacatataaaaattggaagtcttttaaccctta 27124470  T
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
      ||||||||||||||   | ||||||||||||||   |||| ||||  |||||| |||||| |||| ||||||||| | || |||| ||||||||||||    
T  27124471 tgttttatatcgtcaa--gttcaaaaataagtaacgagaattgtttgctcgaaacgacaatccatgtcgatacgataatataattatcactttattactt 27124568  T
Q  227 ggtaaacaattcagtacactt 247  Q
    ||||||| |||  ||||||||    
T  27124569 ggtaaacgatttggtacactt 27124589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 233
Target Start/End: Original strand, 22410234 - 22410410
Alignment:
Q  57 tttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttat---atcgtcaaacttacaaaaa 153  Q
    |||||||||||||||| ||| |||||||||||| |||||| |||| |||  |||||  || ||||||||| |||||||   |||||||| ||||  ||||    
T  22410234 tttctgcaaccaaaaataggaaaacttgctctgttgcaaacagataaaaattgcaagattctaacccttatcttttattatatcgtcaa-ctta--aaaa 22410330  T
Q  154 taagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||   |||| |||||| ||||| ||||||  ||||||||||||| ||||||||| | |||||||||||||||||    
T  22410331 taagtaacgtgaattgtttgaatgaaacgacaatccctgtggatacgatactctacttatcattttattacttggtaaac 22410410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 9726120 - 9726024
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||| |||||| |||| ||||||| |||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  9726120 aaataagtaacgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacactt 9726024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 22413026 - 22413126
Alignment:
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    ||||||||| ||||||||||||||||||||||||||  |||| || | |||||| ||||||| |||| ||||||||| ||||||||| ||||||||||||    
T  22413026 acttttataccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaagaacaatccatgtagatacgatactctacttataactttattactt 22413125  T
Q  227 g 227  Q
    |    
T  22413126 g 22413126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 215
Target Start/End: Complemental strand, 11136119 - 11135941
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttct-gcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctta 126  Q
    ||||||||| |||||||||||| ||||||||| | ||||||||||||||||||  | |||||| |||||| |||| |||  |||||| |          |    
T  11136119 gattcgaagaatcctaaccgcttcttactttttttgcaaccaaaaacaggtaagttcgctctgttgcaaacagataaaaattgcaacct----------a 11136030  T
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttatta 215  Q
    ||||||||| |||||||||||||||||||| |||||  |||||||   ||||||  ||||||| ||||||||||||| |||||||||||    
T  11136029 acttttataccgtcaaacttacaaaaataattaacaataattattcagacgaaaggacaatctctgtggatacgatactctacttatta 11135941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 24657346 - 24657532
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| || ||||||||||||||||||||||||||||||| |||||||| | |||||| |||||| |||| |||  | ||||||           |    
T  24657346 gattcgaagaattctaaccgctgcttacttttctgcaaccaaaa-caggtaaattcgctctgttgcaaacagataaaaatttcaactt-----------a 24657433  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    |||| ||| ||||||||||||||||||||||||||  |||| || | |||||| |||||||  ||||||||||||| || |||||| | |||||||||||    
T  24657434 cttt-ataccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaaaacaatccctgtggatacgatactcgacttatcattttattacttg 24657532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 20005781 - 20005900
Alignment:
Q  14 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa- 112  Q
    ||||| ||||| | ||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||| |||||| |||||| | || |||  |||||     
T  20005781 atatatacagaggggattcgaagaatcttaaccgctgcatacctttctgcaaccaaaaacaggtaaactcgctctgttgcaaacaaataaaaattgcaag 20005880  T
Q  113 ctttataacccttaactttt 132  Q
    |||| |||||||||||||||    
T  20005881 ctttctaacccttaactttt 20005900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 24475292 - 24475147
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||  ||||||||||| ||||||||| || ||||||||||||||||| |||||||||||||||| | || |||||| |||| ||   |||||    
T  24475292 aatataaacaggggagattcgaagaatcctaaccactacttacttttctgcaacc-aaaacaggtaaacttgttttgttgcaaacagataaagattgcaa 24475194  T
Q  113 -ctttataaccc-ttaacttttatatcgtcaaacttacaaaaataagt 158  Q
     |||| |||||| ||| ||||| ||||||| |||||||||||||||||    
T  24475193 cctttctaaccctttatcttttttatcgtc-aacttacaaaaataagt 24475147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 17729231 - 17729152
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 249  Q
    |||| ||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||||    
T  17729231 tttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttac 17729152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 25927305 - 25927386
Alignment:
Q  152 aataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||   |||| |||| ||||||| | |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  25927305 aataagtaacgtgaattgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttggtaaac 25927386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 21672434 - 21672518
Alignment:
Q  149 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||| ||||||||| |||| |||| ||||||  | |||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  21672434 aaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttggtaaac 21672518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 23009372 - 23009471
Alignment:
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||| | ||||  ||||||  ||||||||||||  ||||||||| |||||| |||||    
T  23009372 acttttatatcgtcaaacttacaaaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcactttaatactt 23009470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 23778992 - 23778893
Alignment:
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||| | ||||  ||||||  ||||||||||||  ||||||||| |||||| |||||    
T  23778992 acttttatatcgtcaaacttacaaaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcactttaatactt 23778894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 28933660 - 28933746
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaat 236  Q
    |||||||| |||||||||| |||| ||||||| | ||||  ||||||||||||| ||||||||| ||||||||| ||| ||||||||    
T  28933660 aaaataagcaacacaaattgtttggacgaaacgataatccttgtggatacgatactctacttatcactttattatttgctaaacaat 28933746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 11177049 - 11176952
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||| ||||||||  | ||||| |||| | |||||||||||||| ||||||||| |||||| |||| ||||||| |||  ||||||||    
T  11177049 aaaataagtaacacgaattatttcgaagaaacgacaacccatgtggatacgatactctacttatcactttagtactcggtaaacgattgggtacactt 11176952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 23143838 - 23143739
Alignment:
Q  131 ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggta 230  Q
    |||||||||||| ||||||||| |||||||||  |||| |||| ||||||| ||||||  |||||||| |||| ||||||||| ||||||||| ||||||    
T  23143838 ttatatcgtcaa-cttacaaaa-taagtaacatgaattgtttggacgaaacgacaatccctgtggatatgatactctacttatcactttattaattggta 23143741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 21679850 - 21679934
Alignment:
Q  149 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||| ||||||||| |||| |||| ||||||  | |||| |||||||||||||| ||||||||| |||||||||||| ||||||    
T  21679850 aaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttagtaaac 21679934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 25782014 - 25781927
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    |||||| ||||| | ||||||||| ||||||||  ||| |||||||||||||||| |||| |||||||||||||||| |||||| ||||    
T  25782014 aatatatacagaggggattcgaagaatcctaactactgtttacttttctgcaacc-aaaataggtaaacttgctctgttgcaaacagat 25781927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 18075386 - 18075485
Alignment:
Q  149 aaaaataagtaa-cacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||| | || ||| |||| || |||| |||||| | |||||||||||| ||| ||||| |||||||||||||||||||||||  ||||||||    
T  18075386 aaaaataagtaaactcagattgtttggacaaaacgacaatccacgtggatacgatactctgcttatcactttattacttggtaaacaatttcgtacactt 18075485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 20144984 - 20145067
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||||| |||| | ||||||||| ||||| |||||||||| |||||||||||| ||||| | |||||||| ||||| ||||||    
T  20144984 aatataaccagaggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaa 20145067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 22187855 - 22187772
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||||| |||| | ||||||||| ||||| |||||||||| |||||||||||| ||||| | |||||||| ||||| ||||||    
T  22187855 aatataaccagaggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaa 22187772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 17382275 - 17382218
Alignment:
Q  43 aaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||||    
T  17382275 aaccgctgcttacttttctgcaacc-aaaacatgtaaacttgctctgttgcaaacagat 17382218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 21841663 - 21841765
Alignment:
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    ||||||||||| ||||||||||||||||||||||||||  || | || | ||||||  |||||| |||||||| | | | |||||||||  |||||||||    
T  21841663 taacttttataccgtcaaacttacaaaaataagtaacaagaaatgttcggacgaaaggacaatccatgtggattcaaaactctacttatctctttattac 21841762  T
Q  225 ttg 227  Q
    |||    
T  21841763 ttg 21841765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 12183331 - 12183428
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||   |||| || | ||||||  |||||| |||||||||||||| | ||||||| ||||||||||||||||||| |||  ||||||||    
T  12183331 aaaataagtaacgtgaattgttaggacgaaatgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacgatttggtacactt 12183428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 14079336 - 14079421
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 114  Q
    |||||||| || |||||||||||||||||||||| ||||||||| ||| |||||| || || |||||| |||| |||  |||||||    
T  14079336 attcgaagaattctaaccgctgcttacttttctgtaaccaaaaataggaaaacttcctttgttgcaaacagataaaaattgcaact 14079421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 23645765 - 23645850
Alignment:
Q  148 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||| ||||   |||| |||| ||||||| ||||||  | ||||||||||| ||||||||| |||||||||||||||||||    
T  23645765 caaaaataattaacgataattgtttggacgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaac 23645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 6630717 - 6630773
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||| ||||||||||||||| ||||| |||||||||||  ||||||||||||||||    
T  6630717 acgaaacgacaatctatgtggatccgatactctacttatta--ttattacttggtaaac 6630773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 21907511 - 21907448
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||| ||||||| ||||||  ||||||||||||| | ||||||| |||||||||||||||||||    
T  21907511 tttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaac 21907448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 9898978 - 9899056
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttatt-actttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||||||||   |||||||| ||| ||||||| |  |||||||||||||||||||||||  ||||||||    
T  9898978 tttgaacgaaacaacaatccccgtggatacaatactctacttttagactttattacttggtaaacaatttggtacactt 9899056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 17299832 - 17299914
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||| |||||| |||| || |||| ||||||    || |||||||| ||||||||| |||||||||||||||||||    
T  17299832 aaataagtaacgcaaattgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattacttggtaaac 17299914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 22813612 - 22813665
Alignment:
Q  42 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| || ||||||    
T  22813612 taaccgctacttacttttctgcaacc-aaaacaggtaaacttgctttgttgcaaa 22813665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 1635185 - 1635140
Alignment:
Q  26 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaa 71  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||    
T  1635185 gagattcgaagaatcctaaccgctgtttacttttctacaaccaaaa 1635140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 4339851 - 4339737
Alignment:
Q  129 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 228  Q
    |||||||||||||||||    |||||||||||  | ||||  ||| || |||| ||||||  ||||||||| ||| ||||||||| ||||||||| |||     
T  4339851 ttttatatcgtcaaact----aaaataagtaatgcgaattggttggacaaaacgacaatcattgtggatacaatactctacttatcactttattatttga 4339756  T
Q  229 taaacaattcagtacactt 247  Q
    |||||||||  ||||||||    
T  4339755 taaacaatttggtacactt 4339737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 12183208 - 12183279
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||||| |||||||||| |||||||||||||| |||| ||||||||| |||||||| || |||||| ||||    
T  12183208 gattcgaagaatcctaaccgttgcttacttttctgtaacc-aaaacaggt-aacttgctatgttgcaaacagat 12183279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 20005899 - 20005976
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| ||||||| | |||| |||| ||||||||| ||| ||||| ||||||||||||||||||| |||  ||||||||    
T  20005899 tttggacgaaacgaaaatccatgtagatacgatactctgcttatcactttattacttggtaaacgatttggtacactt 20005976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 21932100 - 21932149
Alignment:
Q  198 acgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  21932100 acgatactctacttatcactttattacttggtaaacaatttggtacactt 21932149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 22567919 - 22567842
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| ||||||| |||||| |||||||||| ||| | ||||| | || ||||||||||||||||||||  ||||||||    
T  22567919 tttggacgaaaccacaatccatgtggatacaatactatacttttcacgttattacttggtaaacaatttggtacactt 22567842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 17883719 - 17883771
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    |||| |||| ||| ||| |||||||||||||||| ||||||||||||||||||    
T  17883719 gatttgaagaatcataaacgctgcttacttttctccaaccaaaaacaggtaaa 17883771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 9838472 - 9838380
Alignment:
Q  129 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    |||||||||||||||||    |||||||||||| | | || ||| ||| |||  |||||| |||||||||| ||| ||||||||| |||||||||||    
T  9838472 ttttatatcgtcaaact----aaaataagtaacgcgagttgtttcaacaaaatgacaatccatgtggatacaatactctacttatcactttattact 9838380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 19244664 - 19244601
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||| ||||||| ||||||| | | ||| ||||| ||||||||| |||||||||||||||||||    
T  19244664 tttggacgaaacgacaatctctatagattcgatactctacttatcactttattacttggtaaac 19244601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 7543005 - 7543047
Alignment:
Q  195 gatacgatattctacttattactttattacttggtaaacaatt 237  Q
    ||||||||| | ||||||| |||||||||||||||||||||||    
T  7543005 gatacgatactttacttatcactttattacttggtaaacaatt 7543047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 18075289 - 18075331
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaa 71  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||    
T  18075289 attcaaagaatcttaaccgctgcttacttttctgcaaccaaaa 18075331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 22566203 - 22566249
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttggtaaacaatt 237  Q
    |||||||| |||| ||||||||| |||||||||||||||||| ||||    
T  22566203 tgtggatatgatactctacttatcactttattacttggtaaataatt 22566249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 15466577 - 15466493
Alignment:
Q  41 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact 129  Q
    |||||||||| ||||||||||||||||  ||| |||| ||||||||||| |||||| |||| |||| ||||| | | ||||||||||||    
T  15466577 ctaaccgctgtttacttttctgcaacc--aaataggt-aacttgctctgttgcaaacagataaaatttgcaa-tctctaacccttaact 15466493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 22566049 - 22566090
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaa 79  Q
    |||||||||||||||||||||||| ||| |||||| ||||||    
T  22566049 atcctaaccgctgcttacttttctacaatcaaaaataggtaa 22566090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 8241335 - 8241279
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||| |||  ||||||||    
T  8241335 tgtggatacgatactctacttatcactttcttacttcgtaaacgatttggtacactt 8241279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 22412940 - 22412999
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctg 89  Q
    |||||||| |||||||||||| |||||||| ||| |||| |||||||||||| | ||||||    
T  22412940 attcgaagaatcctaaccgctacttactttcctgtaacc-aaaacaggtaaattcgctctg 22412999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 24252227 - 24252287
Alignment:
Q  148 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattcta 208  Q
    |||||||||||||||  |||| |||| || |||| |||||| |||||||||||||| ||||    
T  24252227 caaaaataagtaacaagaattgtttggactaaacgacaatccatgtggatacgatactcta 24252287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 684 - 904
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||| | | ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||  |||||    
T  684 aatataaacagagggggttcgaagaatcttaaccgcttcttacttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaa 783  T
Q  113 -ctttat-aacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctact 210  Q
     |||| | |||||||| |||||||||||||||||||| |||||||||||||    ||| |||| ||||||| |||||||   ||||||||||| ||||||    
T  784 tctttctaaacccttatcttttatatcgtcaaacttataaaaataagtaacgtggattgtttggacgaaacgacaatctcaatggatacgatactctact 883  T
Q  211 tattactttattacttggtaa 231  Q
    ||| |||||||||||||||||    
T  884 tatcactttattacttggtaa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 20744532 - 20744679
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| || |||||| |||| |||  |||||    
T  20744532 aatataaacaggtgggattcgaagaatcctaaccgctgcttacttttctacaaccaaaa-caggtaaacttgctatgttgcaaacagataaaaattgcaa 20744630  T
Q  113 ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaac 161  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||    
T  20744631 ctctctaacccttaacttttatatcgtcaaacttacaaaaataagtaac 20744679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 70 - 247
Target Start/End: Original strand, 19004146 - 19004323
Alignment:
Q  70 aaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaatta 169  Q
    |||||| ||||||||| ||| |||||| |||| |||  ||||||| | ||||||||| ||||||||||||||||||||||||||||||||||   ||||     
T  19004146 aaacagataaacttgccctgttgcaaacagataaaaattgcaactatttaacccttatcttttatatcgtcaaacttacaaaaataagtaacgtgaattg 19004245  T
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| || |||  |||||| |||||||||||||| || |||||| ||||||||||||||||||| ||| |||||||||    
T  19004246 tttggacaaaatgacaatccatgtggatacgatactccacttatcactttattacttggtaaacgatttagtacactt 19004323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 247
Target Start/End: Complemental strand, 17432103 - 17431885
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaac 128  Q
    |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| |||  |||  | ||||| | |||||||||      
T  17432103 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaa-caagtaaacttgctctgttgcaaacagaaaaaaattacaactctttaacccttata 17432005  T
Q  129 ttttatatcgtcaaa-cttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    |||||||||| |||| |||| ||||||||||| |   | || |||| | ||||| ||||||| ||||||||||||| |||||||   |||||||||||||    
T  17432004 ttttatatcgccaaaacttataaaaataagtagcgtgagttgtttggatgaaacgacaatctctgtggatacgatactctactttccactttattacttg 17431905  T
Q  228 gtaaacaattcagtacactt 247  Q
    |||||| ||| |||||||||    
T  17431904 gtaaacgatttagtacactt 17431885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 229
Target Start/End: Complemental strand, 34128857 - 34128656
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 125  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||| |  | |||  | |||  |||| ||||||||    
T  34128857 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaa-caggtaaacttgctctattgcaaacaagtcaaaatttcaagtctttttaaccctt 34128759  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    |||||||||| | |||| |||| ||||||||| |||   |||| |||| ||||||  |||||   ||||||||||||||||||||||| |||||||||||    
T  34128758 aacttttataccttcaa-cttataaaaataagaaacgagaattttttggacgaaaggacaattcctgtggatacgatattctacttatcactttattact 34128660  T
Q  226 tggt 229  Q
    ||||    
T  34128659 tggt 34128656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 39434676 - 39434478
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 125  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||        ||| |||| |||  |||||  |||| ||||||||    
T  39434676 gattcgaagaatcctaaccgttgcttacttttctgcaaacaaaa-caggtaaacttgc--------aaacagataaaaattgcaattctttttaaccctt 39434586  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    |||||||||||||||||  | | ||||||||||||| | |||| |||| || |||  |||||| ||||||||||||| |||||||||| | |||||||||    
T  39434585 aacttttatatcgtcaagttaataaaaataagtaacgcgaattgtttggacaaaaggacaatccatgtggatacgattttctacttatcaatttattact 39434486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 20563957 - 20564158
Alignment:
Q  16 ataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactt 115  Q
    ||||||||| | ||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| |||||||| |||||| |||| |||  ||||||      
T  20563957 ataaacagaggtgattcgaagaatcctaactgcttcttacttttctgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgcaac-- 20564054  T
Q  116 tataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-tt 214  Q
             | ||||||||| |||||||||||||||||||||||||   ||   |||| |||||| ||||||| |||||||||||||| |||||||| |     
T  20564055 ---------tcacttttataccgtcaaacttacaaaaataagtaactagaagcgtttggacgaaagaacaatccatgtggatacgatactctacttacta 20564145  T
Q  215 actttattacttg 227  Q
    |||||||||||||    
T  20564146 actttattacttg 20564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 23388813 - 23388925
Alignment:
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    ||||||||| | ||||||||||||||||||||||||||  |||| || | ||||||  |||||| |||||||||||||| ||||||||| ||||||||||    
T  23388813 taacttttacaccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattac 23388912  T
Q  225 ttggtaaacaatt 237  Q
    ||||| |||||||    
T  23388913 ttggttaacaatt 23388925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 231
Target Start/End: Original strand, 24245421 - 24245625
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac-tttataaccctt- 125  Q
    ||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||| || || ||| | || |||   | ||| ||| ||||||||     
T  24245421 gattcgaagaatcctaaccgttgcttacttttctgcaactaaaa-caggtaaacttgctttgttggaaacaaataaaaatcgaaacctttctaacccttt 24245519  T
Q  126 -aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
     | |||||||||  |||| |||||||||||||||||| | | || |||| ||||||| ||||||  ||||||||||||| ||||||||| ||||||||||    
T  24245520 tatcttttatattctcaa-cttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttattac 24245618  T
Q  225 ttggtaa 231  Q
     ||||||    
T  24245619 atggtaa 24245625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 20315307 - 20315513
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttat--aaccctt 125  Q
    ||||||||| | ||||| |||| |||||| || ||||||||||| || ||||||||||| || |||||| |||| |||  ||||| ||| |  | |||||    
T  20315307 gattcgaagaaccctaatcgcttcttactattttgcaaccaaaa-catgtaaacttgctttgttgcaaacagataaaaattgcaagtttctttatccctt 20315405  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    || ||||||||||||||  | | |||||||||| || | |||| |||| ||||||  | |||| |||||||||||||| ||||||||| || ||||||||    
T  20315406 aaattttatatcgtcaacttaataaaaataagttacgcgaattgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattact 20315505  T
Q  226 tggtaaac 233  Q
    ||||||||    
T  20315506 tggtaaac 20315513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 19051679 - 19051551
Alignment:
Q  118 taacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattact 217  Q
    ||||||||||||||||| || ||||||||||||||||||||||||  |||| |||  | | ||||||||||  || |||||||| | || |||||| |||    
T  19051679 taacccttaacttttatgtcatcaaacttacaaaaataagtaacaagaattgtttagatggaacaacaatccctg-ggatacgacactcaacttatcact 19051581  T
Q  218 ttattacttggtaaacaattcagtacactt 247  Q
    ||||||||| |||||| |||  ||||||||    
T  19051580 ttattactttgtaaacgatttggtacactt 19051551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 34487736 - 34487640
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||| | |||| |||  ||||||| |||||| ||||||||| |||||||||||||  |||||||||||||||||||||||  ||||||||    
T  34487736 aaaataagtaacgcgaattgtttagacgaaacgacaatccatgtggatatgatattctactta-cactttattacttggtaaacaatttggtacactt 34487640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 15375772 - 15375979
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||||| | ||||||||| |||||||||||| |||  ||||||||||| |||||| | || |||  |||||   | |||           
T  15375772 gattcgaagaatcctaaccgttacttacttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattgcaa---tctaa------- 15375861  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
     ||||||| |||||| ||| |||||||||||||  |||||| |||| ||||||| ||||||  |||||||| |||| ||||||||| | ||||||| |||    
T  15375862 -ttttataccgtcaa-cttgcaaaaataagtaatgcaaattttttggacgaaacgacaatccctgtggataggatactctacttatcattttattatttg 15375959  T
Q  228 gtaaacaattcagtacactt 247  Q
    |||||| |||  ||||||||    
T  15375960 gtaaacgatttggtacactt 15375979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 20858807 - 20858707
Alignment:
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    ||||||||| ||||||||||||||||||||||||||  |||| || | || |||  |||||||  |||||||||||| ||||||||| | ||||||||||    
T  20858807 acttttataccgtcaaacttacaaaaataagtaacaagaattgttcggacaaaaggacaatctccgtggatacgatactctacttatcattttattactt 20858708  T
Q  227 g 227  Q
    |    
T  20858707 g 20858707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 25550487 - 25550587
Alignment:
Q  131 ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggta 230  Q
    |||||||||||| ||||||||| |||||||||  |||| |||| ||||||  ||||||  |||||||| |||| ||||||||| ||||||||||||||||    
T  25550487 ttatatcgtcaa-cttacaaaa-taagtaacaagaattgtttggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttggta 25550584  T
Q  231 aac 233  Q
    |||    
T  25550585 aac 25550587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 16523680 - 16523766
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 114  Q
    ||||| ||| ||||||||||||||||||||||||  ||| ||||||||||||| | |||||| |||||| |||| |||  |||||||    
T  16523680 gattcaaagaatcctaaccgctgcttacttttctataacaaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaact 16523766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 20549597 - 20549647
Alignment:
Q  30 ttcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  20549597 ttcgaagaatcctaaccgctgcttacttgcctgcaaccaaaaacaggtaaa 20549647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 26835886 - 26835799
Alignment:
Q  12 gaatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||| ||| ||| ||||||||| |||||||| ||||| ||||||||||||||  |||||||||||| | |||||| |||||| ||||    
T  26835886 gaatatacacatatgggattcgaagaatcctaactgctgcatacttttctgcaac--aaaacaggtaaattcgctctgttgcaaacagat 26835799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 18208249 - 18208345
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||  |||| |||| ||||||  |||||| |||||||||||||| ||||||||  |||||||||||| |||||| |||  ||||||||    
T  18208249 aaaataagtaacatgaattgtttggacgaaaggacaatccatgtggatacgatactctactta-cactttattactttgtaaacgatttggtacactt 18208345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 24140657 - 24140597
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctg 89  Q
    |||| |||| |||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  24140657 gatttgaagaatcctaaccgttgcttacttttctgcaacc-aaaataggtaaacttgctctg 24140597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 17315090 - 17315182
Alignment:
Q  140 caaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||||||||||||||||||   |||| || | | ||||  |||||| |||||||||||||| | ||||||| ||||||||||||| ||||    
T  17315090 caaacttacaaaaataagtaactagaattgttcggaagaaaggacaatccatgtggatacgatactttacttatcactttattacttgataaa 17315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 24852173 - 24852253
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    |||||||||||   |||| |||  |||||||||||||| |||||||||||||| | ||||||| | |||||||||||||||    
T  24852173 aaataagtaacgtgaattgtttagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaa 24852253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 17171578 - 17171652
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 249  Q
    ||||||| |||||| |||||||||||||  ||||||||| ||||||||||||| ||||  |||  ||||||||||    
T  17171578 acgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaaagatttggtacacttac 17171652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 19086207 - 19086277
Alignment:
Q  178 aaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactta 248  Q
    ||||||||||  |||||||||  ||| ||||||||| ||||||||||||||||||| |||  |||||||||    
T  19086207 aaacaacaattcatgtggatataatactctacttatcactttattacttggtaaacgatttggtacactta 19086277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 24167586 - 24167683
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 249  Q
    |||||||||| ||| ||| |||| | ||||| |||||| ||||  ||| |||| |||||||| |||||||||||||||||||| ||| | |||||||||    
T  24167586 aaataagtaa-acagattgtttggaagaaacgacaatccatgtatatatgatactctacttactactttattacttggtaaacgatttaatacacttac 24167683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 24266955 - 24267051
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||| |||| |||| || |||  | ||||  ||||||||||||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  24266955 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacactt 24267051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 24343586 - 24343682
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||| |||| |||| || |||  | ||||  ||||||||||||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  24343586 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacactt 24343682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 25402337 - 25402434
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||| | ||| ||| | ||||||| ||||||  ||||||||| ||| ||||||||| ||||  |||||||| ||||||||  ||||||||    
T  25402337 aaaataagtaacgcgaatcattaggacgaaacgacaatccctgtggatacaatactctacttatcacttccttacttggcaaacaatttggtacactt 25402434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 28664983 - 28664911
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||||| ||| |||||| |||||| |||||||||||| |||||||||||| | |||||| |||||| ||||    
T  28664983 gattcgaagaatcttaaccgttgcttatttttctgcaacc-aaaacaggtaaattcgctctgttgcaaacagat 28664911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 15470010 - 15469938
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||| |||||  |||||||||||||| || || ||| ||||||||||||||||||| |||  ||||||||    
T  15470010 acgaaacgacaattcatgtggatacgatactcgacctatcactttattacttggtaaacgatttggtacactt 15469938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 24140542 - 24140458
Alignment:
Q  149 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||| ||||| | |||| |||| ||||||  ||||||   |||||||| ||| ||||||||| |||||||||||||||||||    
T  24140542 aaaaatatgtaacgcgaattgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttggtaaac 24140458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 22755577 - 22755523
Alignment:
Q  193 tggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||| |||||||||  ||| |||||||||||||| |||| ||||||||    
T  22755577 tggatacgatactctacttatctcttcattacttggtaaacgattcggtacactt 22755523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 17635378 - 17635325
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgata 203  Q
    |||||||||||||| |||| |||| ||||| ||||||| |||||||||| ||||    
T  17635378 aaaataagtaacacgaattgtttggacgaaccaacaatttatgtggatatgata 17635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 20858894 - 20858827
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||||| | |||||||||||||||||||||| ||||||| |||| ||||||| | ||| || ||||||    
T  20858894 gattcgacgaatcctaaccgctgcttacttttatgcaacc-aaaataggtaaattcgctttgttgcaaa 20858827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 23380290 - 23380354
Alignment:
Q  183 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||| || || |||||||| | ||||||| | |||||||||||||||||||||  ||||||||    
T  23380290 acaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacactt 23380354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 17438287 - 17438512
Alignment:
Q  7 tcgaagaatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 106  Q
    ||||| |||||||| ||| | ||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||| |||| |||     
T  17438287 tcgaacaatataaatagaggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaa-caggtaaaattgctctgttgcaaacagataaaaa 17438385  T
Q  107 atgcaa-ctttataacccttaactt-ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatat 204  Q
     ||||| |||| ||| |||| | || |||||||||||||||||||||||||||||||   |||| |||| ||||||| |||||| ||||||||| ||||     
T  17438386 ttgcaagctttctaaacctttatttattatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatac 17438485  T
Q  205 tctacttattactttattacttggtaa 231  Q
    ||||||||| | ||||| |||||||||    
T  17438486 tctacttatcattttataacttggtaa 17438512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 21302141 - 21301920
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| ||||||||||||| ||| |||||||||| |||||| |||||||||||||||| |||||| |||| |||  | ||||  | |||||| ||     
T  21302141 gattcgaagaatcctaaccgctgtttatttttctgcaatcaaaaaaaggtaaacttgctctgttgcaaacagataaaaattccaacactctaacccatat 21302042  T
Q  128 cttttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    |||||||   ||||||||  ||||||||||||||||| | |||| |||| ||||||  |||||| |||||||||||||| ||||||||| ||||||||||    
T  21302041 cttttattatatcgtcaat-ttacaaaaataagtaactcgaattgtttggacgaaatgacaatccatgtggatacgatactctacttatcactttattac 21301943  T
Q  225 ttggtaaacaattcagtacactt 247  Q
    ||||||||| |||  ||||||||    
T  21301942 ttggtaaacgatttggtacactt 21301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 19925504 - 19925701
Alignment:
Q  33 gaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact---ttataacccttaact 129  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| | || |||| ||||| |   || |||||||||| |    
T  19925504 gaagaatcctaaccgctgcttacttttctgcaaaccaaaacaggtaaacttgctctgttgcaaacatataaaat-tgcaagtctcttttaacccttaaat 19925602  T
Q  130 tttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 228  Q
    |||||||||| ||  | | ||||||||||||| | ||||||||| ||||||  |||||| |||||||||||||| ||||| ||| || |||||||||||    
T  19925603 tttatatcgttaacttaataaaaataagtaacgcgaattatttggacgaaaagacaatccatgtggatacgatactctacatatcaccttattacttgg 19925701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 12411384 - 12411169
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 112  Q
    |||||||||||  | ||||||||| ||||||||||   |||||| |||||||||||||  |||||||||||| | || |||||| | |  |||  |||||    
T  12411384 aatataaacaggggggattcgaagaatcctaaccgtcacttactgttctgcaaccaaa--caggtaaacttgttgtgttgcaaacata--aaaattgcaa 12411289  T
Q  113 ctttataa-cccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactt 211  Q
     ||| ||| ||||||||||||||||| ||||||||| |||||||||||||  ||||| |||| ||||||| ||||||  ||||||||||||| ||||||     
T  12411288 atttctaaacccttaacttttatatcatcaaacttagaaaaataagtaacctaaattgtttgtacgaaacgacaatccttgtggatacgatactctacta 12411189  T
Q  212 attactttattacttggtaa 231  Q
    || |||||||||||||||||    
T  12411188 atcactttattacttggtaa 12411169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 247
Target Start/End: Complemental strand, 19908542 - 19908309
Alignment:
Q  15 tataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 114  Q
    |||||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||| | || |||  | |||      
T  19908542 tataaacatatgggattcgaagaatcctaactgctgcttacttttctgcaaccaaaaataggtaaacttgctttgttgcaaaaaaataaaaattccaatc 19908443  T
Q  115 ttataacccttaacttttatatcgtcaaact-tacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttat 213  Q
    || ||||||||||||||||||||||||||||  | ||||||| || ||   |||| |||| ||||||| || | |  ||||||||||||| | |||||||    
T  19908442 ttttaacccttaacttttatatcgtcaaactgaaaaaaaataggttacgtgaattgtttggacgaaacgacgacccttgtggatacgatactatacttat 19908343  T
Q  214 tactttattacttggtaaacaattcagtacactt 247  Q
     | ||||||| ||||||||| |||  ||||||||    
T  19908342 cattttattatttggtaaacgatttggtacactt 19908309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 29 - 233
Target Start/End: Complemental strand, 932963 - 932758
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctta 126  Q
    |||||||| || ||||||||||||||||||||||||||||||| || |||||||||||||| |||||| | || |||  || ||  ||||  |||| |||    
T  932963 attcgaagaatactaaccgctgcttacttttctgcaaccaaaa-caagtaaacttgctctgttgcaaacaaataaaaattgtaagtcttttaaaccttta 932865  T
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    ||||||||| ||||||||||| ||||||||||||    |||| |||| ||||||  ||||||| ||||||||||||| |||| |||| | ||||||||||    
T  932864 acttttataacgtcaaacttataaaaataagtaatgtgaattttttggacgaaaggacaatctctgtggatacgatactctatttatcaatttattactt 932765  T
Q  227 ggtaaac 233  Q
     ||||||    
T  932764 agtaaac 932758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 16245607 - 16245812
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    |||||| || || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||  ||||| | | ||||||||||    
T  16245607 gattcggagaattctaaccgctgcttacttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaaatctctaacccttaa 16245705  T
Q  128 --ctttta---tatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 222  Q
      ||||||   ||| ||||||||    ||||||||||||   |||| |||| ||||||  | |||| ||||||||| |||| ||||||||| ||||||||    
T  16245706 ctcttttattttattgtcaaact----aaaataagtaacgagaattgtttggacgaaatgataatccatgtggatatgatactctacttatcactttatt 16245801  T
Q  223 acttggtaaac 233  Q
    |||||||||||    
T  16245802 acttggtaaac 16245812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 232
Target Start/End: Complemental strand, 4650447 - 4650248
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 125  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| |||| |||  |||||  |||| ||||||||    
T  4650447 gattcgaagaatcctaaccgttgcttacttttctgcaacc-aaaacaggtaaacttgctccgttgcaaacagataaaaattgcaagtctttttaaccctt 4650349  T
Q  126 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 225  Q
    ||||||| ||||||| |||||     |||||||||| | |||| ||||  |||||  ||||||  ||||||||||||| | |||| || |||||||||||    
T  4650348 aacttttgtatcgtc-aactt-----aataagtaacgcgaattgtttgggcgaaaggacaatccctgtggatacgatactttactcatcactttattact 4650255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 16229831 - 16230019
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| |||| |||  ||||||||           |    
T  16229831 gattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaactt-----------a 16229919  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    |||||||| | |||||||||||||||||||||||   |||| |  | || |||  ||||||  ||||||||||||| |||||||| ||||||||||||||    
T  16229920 cttttataccatcaaacttacaaaaataagtaactagaattgtaaggacaaaaggacaatccctgtggatacgatactctacttactactttattacttg 16230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 8770243 - 8770039
Alignment:
Q  14 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac 113  Q
    ||||| ||||| | ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| | || |||  |||||     
T  8770243 atatatacagaggggattcgaagaatcctaactgctgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa- 8770146  T
Q  114 tttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttat 213  Q
             | |||||||||||  ||||||||||||||| |||||||||  |||| ||   || |||  |||||| ||||||||| |||| | |||||||    
T  8770145 ---------cctaacttttatactgtcaaacttacaaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatatgatactttacttat 8770055  T
Q  214 tactttattacttggt 229  Q
     |||||||||||||||    
T  8770054 cactttattacttggt 8770039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 21325439 - 21325342
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||||||||| |||| ||||||| ||||| | ||||||||||||| | ||||||| | |||||||||||||||||||||  ||||||||    
T  21325439 aaaataagtaacacaaattgtttggacgaaacgacaatttttgtggatacgatactatacttatcagtttattacttggtaaacaatttggtacactt 21325342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 12754800 - 12754868
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 96  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  12754800 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaa 12754868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 8170093 - 8169907
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||| | ||| || |||||| |||| |||  | |||||            |    
T  8170093 gattcgaagaatcctaaccgctgcatacttttctgcaaccaaaaacaggtaaattcgctatgttgcaaacagataaaaattacaact------------a 8170006  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    |||||||| |  | ||||||||||||||||||||   |||| || | |||||| || ||||| ||||||||||||||| |||||| ||||||||||||||    
T  8170005 cttttataccaac-aacttacaaaaataagtaactagaattgttcggacgaaagaaaaatctctgtggatacgatattttacttactactttattacttg 8169907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 229
Target Start/End: Complemental strand, 8765327 - 8765137
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| | || |||  |||||          | |||    
T  8765327 gattcgaagaatcttaactgctgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa----------cctaa 8765239  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    ||||||||  ||||||||||||||| |||||||||  |||| ||   || |||  |||||| |||||||||||||| | ||||||| ||||||||| |||    
T  8765238 cttttatactgtcaaacttacaaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatacgatactttacttatcactttattaattg 8765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 19171810 - 19171931
Alignment:
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    |||||||||||||||||| || ||||||||||||||  |||||| |||| ||||||| ||||||  |||| ||| |||  ||| ||||| ||||||||||    
T  19171810 taacttttatatcgtcaacct-acaaaaataagtaatgcaaattgtttggacgaaacgacaatccttgtgaatatgatcctctgcttatcactttattac 19171908  T
Q  225 ttggtaaacaattcagtacactt 247  Q
    ||||||||||||| |||| ||||    
T  19171909 ttggtaaacaatttagtatactt 19171931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 247
Target Start/End: Complemental strand, 22349532 - 22349411
Alignment:
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    |||||||||||  ||||| |||||||||||||||||    |||| |||| ||||||| ||||| ||||||||||||||| ||||||||| |||||||||     
T  22349532 taacttttatactgtcaa-cttacaaaaataagtaatgtgaattgtttggacgaaacgacaatttatgtggatacgatactctacttatcactttattat 22349434  T
Q  225 ttggtaaacaattcagtacactt 247  Q
    ||||||||| |||  ||||||||    
T  22349433 ttggtaaacgatttggtacactt 22349411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 27413766 - 27413835
Alignment:
Q  20 acagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctg 89  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  27413766 acagacgagatacgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaaatcgctctg 27413835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 20429920 - 20429714
Alignment:
Q  40 cctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa-cttttat---a 135  Q
    ||||||| ||| ||||||||||||||||||||  || ||||||||||||| |||||| | || |||  |||||  || |||||||||  |||||||   |    
T  20429920 cctaaccactgattacttttctgcaaccaaaat-agataaacttgctctgttgcaaacatataaaaattgcaaacttctaacccttactcttttattata 20429822  T
Q  136 tcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaa 235  Q
    ||||||||||||  |||||||||||| | |||| | || | ||||  ||||||  | | ||||||||| ||||||||| | |||||||||||||||||||    
T  20429821 tcgtcaaactta--aaaataagtaacgcgaattgtgtggatgaaatgacaatccttatagatacgatactctacttatcattttattacttggtaaacaa 20429724  T
Q  236 ttcagtacac 245  Q
    || |||||||    
T  20429723 tttagtacac 20429714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 8889130 - 8889229
Alignment:
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 227  Q
    |||||||| |||||||||||||||||||||||||   |||| || ||||||||  ||||||  ||||||||| ||| ||||||||| |||||||||||||    
T  8889130 cttttataccgtcaaacttacaaaaataagtaacgagaattgttcgaacgaaaggacaatccctgtggatacaatactctacttatcactttattacttg 8889229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 12805890 - 12805972
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||||||||||| |||||| |||| | ||||| |||||| ||||||||| |||| ||||||||| ||||||||||||||||||    
T  12805890 aaaataagtaacgcaaattgtttggatgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaa 12805972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 233
Target Start/End: Original strand, 21303242 - 21303437
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact-------t 130  Q
    |||||||||||||||||||||||||||||||||| || |||| ||||||||| |||||| |||| |||  ||||| | | |||||||| |||       |    
T  21303242 atcctaaccgctgcttacttttctgcaaccaaaa-caagtaa-cttgctctgttgcaaacagataaaaattgcaa-tctctaaccctttactcttttatt 21303338  T
Q  131 ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggta 230  Q
    |||||| ||||| ||||   |||||||||||  ||||| |||| | ||||||||||||| ||||| ||||||| ||||||||| | ||||||| ||||||    
T  21303339 ttatatagtcaa-ctta---aaataagtaacggaaattgtttggatgaaacaacaatctttgtggctacgatactctacttatcattttattatttggta 21303434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 8557130 - 8557211
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||||||||| |||||| ||| || ||||| |||||| |||||||||||||| ||||||||| ||||||||||| ||||||    
T  8557130 aaataagtaacgcaaattgtttaaatgaaacgacaatccatgtggatacgatactctacttatcactttattactcggtaaa 8557211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 10917992 - 10917920
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||||| |||  ||||||||    
T  10917992 acgaaacaacaatccatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacactt 10917920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 821515 - 821597
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||||  |||| |||  ||||||| | |||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  821515 aaataagtaacatgaattgtttacacgaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaaac 821597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 18458456 - 18458521
Alignment:
Q  182 aacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||  ||||||||    
T  18458456 aacaatctttgtggatacgatactctacttatcactttattacttgataaacaatttggtacactt 18458521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 12759445 - 12759389
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  12759445 tgtggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 12759389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 19909850 - 19909902
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  19909850 gattcaaagaatcctaaccgctgcttacttttctgcaacaaaaaacaggtaaa 19909902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 8319138 - 8319055
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||||||||  |||| |||| ||||||| | ||||  ||||||||| ||||||||||||| |||| ||||||||||||||    
T  8319138 aaaataagtaacatgaattgtttgtacgaaacgataatccctgtggatactatattctacttatcacttcattacttggtaaac 8319055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 28729016 - 28728961
Alignment:
Q  177 gaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  28729016 gaaacgacaatctatgtggatacgatactctacttatcactttattacttgataaa 28728961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 2167632 - 2167698
Alignment:
Q  165 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    |||| |||| ||||||| ||| | ||||||||||||||| ||||||||| |||||||||||||||||    
T  2167632 aattgtttggacgaaacgacattttatgtggatacgatactctacttatcactttattacttggtaa 2167698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 21825870 - 21825967
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 249  Q
    ||||||||||| | || | |||| ||||||||| |||| |||||||||||||| ||||||||  ||||||||||| ||||||| |||  ||||||||||    
T  21825870 aaataagtaacgcgaactgtttggacgaaacaaaaatccatgtggatacgatactctactta-cactttattactcggtaaacgatttggtacacttac 21825967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 3116419 - 3116515
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||   |||| |||| ||||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||||||||||  ||||||||    
T  3116419 aaaataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaacaatttggtacactt 3116515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 41508588 - 41508369
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||| ||| ||| ||||||||| |||||||||||||||||||| || |||| |||||| || |||||| ||||  ||  ||||| | | ||||||||||    
T  41508588 gattcaaagaatcttaaccgctggttacttttctgcaaccaaaa-catgtaa-cttgctttgttgcaaacagatacaaattgcaaatctctaacccttaa 41508491  T
Q  128 ct--tttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 222  Q
    ||  |||||   ||||||||| |   ||||||||||||  |||||| |||| || |||| ||||||   |  ||||||||||||||| ||| ||||||||    
T  41508490 ctcttttattttatcgtcaaatt---aaaaataagtaatgcaaattgtttggactaaacgacaatccccgcagatacgatattctacctatcactttatt 41508394  T
Q  223 acttggtaaacaattcagtacactt 247  Q
    ||||| ||||| |||  ||||||||    
T  41508393 acttgataaacgatttggtacactt 41508369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 7494977 - 7495045
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaac 81  Q
    |||||||| ||| | ||||||||  ||||||| | |||||||||||||| |||||||||||||||||||    
T  7494977 aatataaatagaggggattcgaataatcctaatccctgcttacttttctacaaccaaaaacaggtaaac 7495045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 8883000 - 8883087
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactt 115  Q
    ||||||||| |||||||| || ||||| ||||||||||| ||||| ||||||||| ||| || |||||| |||| |||  ||||||||    
T  8883000 gattcgaagaatcctaactgcagcttaattttctgcaactaaaaataggtaaactcgctatgttgcaaacagataaaaattgcaactt 8883087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 19171744 - 19171799
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactt 83  Q
    ||||||||| ||||||||| |||| |||||||||||||| |||||||| |||||||    
T  19171744 gattcgaagaatcctaaccactgcatacttttctgcaacaaaaaacagataaactt 19171799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 12805768 - 12805810
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaa 70  Q
    ||||||||| ||||||||| |||||||||||||||||||||||    
T  12805768 gattcgaagaatcctaacccctgcttacttttctgcaaccaaa 12805810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 19576108 - 19576150
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  19576108 atcctaaccgctgcttgcttttctgcaaccaaaaataggtaaa 19576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 31286017 - 31286096
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||||||||||  ||||| |||| |||||||| |||||  |||||||||||||||||| |||  ||||||||||||||||||    
T  31286017 aaataagtaacggaaattgtttggacgaaaca-caatccctgtggatacgatattctagtta-cactttattacttggtaaa 31286096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 6289967 - 6289919
Alignment:
Q  185 aatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||| ||||||||| |||| ||||||||| |||||||||||||||||||    
T  6289967 aatccatgtggatatgatactctacttatcactttattacttggtaaac 6289919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 18736717 - 18736768
Alignment:
Q  195 gatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||||||||| ||||||||||||||||||| |||  ||||||||    
T  18736717 gatacgatattctacttat-actttattacttggtaaacgatttggtacactt 18736768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 19909937 - 19910020
Alignment:
Q  127 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctact 210  Q
    |||||||||  ||||||||||||||||||||||||   |||| || ||| ||||  ||||||  ||||||||||||| ||||||    
T  19909937 acttttatacggtcaaacttacaaaaataagtaactagaattgttcgaaagaaaggacaatccctgtggatacgatactctact 19910020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 10744976 - 10744918
Alignment:
Q  175 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||| ||||||  | |||| |||||| ||||||||| |||||||||||||||||||    
T  10744976 acgaaacgacaatccctatggaaacgatactctacttatcactttattacttggtaaac 10744918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 27542944 - 27542997
Alignment:
Q  179 aacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    |||||||||  |||||||||||||| |||||||| ||||||||| ||||||||||    
T  27542944 aacaacaattcatgtggatacgatactctactta-tactttatttcttggtaaac 27542997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 18736560 - 18736593
Alignment:
Q  38 atcctaaccgctgcttacttttctgcaaccaaaa 71  Q
    ||||||||||||||||| ||||||||||||||||    
T  18736560 atcctaaccgctgcttatttttctgcaaccaaaa 18736593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 20023430 - 20023502
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||| ||| |||||||| ||| ||||||||||||||||| ||||| |||||| | |||||| |||||| ||||    
T  20023430 gattcaaagaatcctaactgctacttacttttctgcaacc-aaaactggtaaattcgctctgttgcaaacagat 20023502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 21325558 - 21325487
Alignment:
Q  32 cgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaa 105  Q
    ||||| ||| |||||||| ||||||||||||||||| |||  |||| ||||||||||| ||||||||||| |||    
T  21325558 cgaagaatcataaccgctacttacttttctgcaacc-aaattaggt-aacttgctctgttgcaaatagataaaa 21325487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 7478217 - 7478285
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaac 81  Q
    |||||||| ||| | ||||||||  ||||||| | |||||||| ||||| |||| ||||||||||||||    
T  7478217 aatataaatagaggggattcgaataatcctaatccctgcttacatttctacaactaaaaacaggtaaac 7478285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 10745101 - 10745051
Alignment:
Q  49 tgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    ||||||| ||||||||||||||| ||||||| ||||||||| |||||||||||    
T  10745101 tgcttacatttctgcaaccaaaa-caggtaa-cttgctctgttgcaaatagat 10745051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 11518002 - 11518038
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttg 227  Q
    |||||||| |||||||||||||| |||||||||||||    
T  11518002 tgtggatatgatattctacttatcactttattacttg 11518038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 232
Target Start/End: Complemental strand, 70129 - 69930
Alignment:
Q  33 gaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaacttt 131  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||| | || |||  ||||| |||| ||||| ||| ||||    
T  70129 gaagaatcctaactgctgcttacttttctacaaccaaaaacaggtaaacttgctctattgcaaacaaataaaaattgcaacctttctaacctttatcttt 70030  T
Q  132 tatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    |||||| || ||| ||||||||||||||||   |||| |||| ||||||| ||||||  |||| |||||||| | ||||| | |||||||||||||||||    
T  70029 tatatcatc-aacatacaaaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattacttggtaa 69931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 232
Target Start/End: Original strand, 35871 - 36077
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctt-a 126  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| ||| || || | ||||||||| |||  ||||| | | |||||||| |    
T  35871 gattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggtaa-ctttctttgttccaaatagataaaaattgcaaatctctaacccttta 35969  T
Q  127 acttttatat-----cgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttat 221  Q
    ||| ||||||     |||||||||||   ||||||||||||| ||||||||| | ||||| |||||  |||||||||||||| ||||||||| |||||||    
T  35970 actcttatattttatcgtcaaactta---aaataagtaacacgaattatttggatgaaacgacaattcatgtggatacgatactctacttatcactttat 36066  T
Q  222 tacttggtaaa 232  Q
    ||||| |||||    
T  36067 tacttagtaaa 36077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 3655 - 3543
Alignment:
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    ||||||||| | ||||||||||||||||||||||||||  |||| || | ||||||  |||||| |||||||||||||| ||||||||| ||||||||||    
T  3655 taacttttacaccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattac 3556  T
Q  225 ttggtaaacaatt 237  Q
    ||||| |||||||    
T  3555 ttggttaacaatt 3543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 12175 - 12111
Alignment:
Q  183 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||| || || |||||||| | ||||||| | |||||||||||||||||||||  ||||||||    
T  12175 acaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacactt 12111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 25196 - 25056
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    |||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||  |||||          |||||    
T  25196 gatttgaagaatcctaaccgttgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaatagagaaaaattgcaa----------cttaa 25108  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaa 179  Q
    |||||||| ||||||||||||||||||||||||||  |||| |||| |||||    
T  25107 cttttataccgtcaaacttacaaaaataagtaacaataattgtttggacgaa 25056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 226
Target Start/End: Complemental strand, 21486 - 21299
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| ||||||| |||| |||||||||||| |||||||| ||||||||||| ||||| |||||| | || |||  ||||||||          ||    
T  21486 gattcgaagaatcctaatcgctacttacttttctgaaaccaaaa-caggtaaacttcctctgttgcaaacaaataaaaattgcaactt----------aa 21398  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 226  Q
    |||||||| ||||||||||||||||||| ||||||  |||| || | ||||||  ||||||  |||||||| |||| ||||||||| ||||||||||||    
T  21397 cttttataccgtcaaacttacaaaaatatgtaacaagaattgttcggacgaaaggacaatccctgtggatatgatactctacttatcactttattactt 21299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 652 - 482
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||| | |||||| |||||| |||| |||  ||||||||           |    
T  652 gattcgaagaatcctaaccgctgcttacttttctgcaacc-aaaacaggtaaattcgctctgttgcaaacagataaaaattgcaactt-----------a 565  T
Q  128 cttttatatcgtc-aaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctac 209  Q
    ||||||||  ||| |||||||||||||||| |||||  |||| || | ||||||  |||||| |||||||||||||| |||||    
T  564 cttttatactgtcaaaacttacaaaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 15868 - 15800
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaat 97  Q
    ||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  15868 gattcgaagaatactaaccgctgcttacttttccgcaaccaaaaacaggt-aacttgctctgttgcaaat 15800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 72247 - 72159
Alignment:
Q  13 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    |||||||||||| | ||||||||| ||||| ||  ||||||||||||||||||| ||||| | |||||||||||||| |||||| ||||    
T  72247 aatataaacagaggggattcgaagaatccttactactgcttacttttctgcaactaaaaatacgtaaacttgctctgttgcaaacagat 72159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 72125 - 72072
Alignment:
Q  196 atacgatattctacttattactttattacttggtaaacaattcagtacacttac 249  Q
    |||| ||| ||||||||| ||||||||||||||| |||||||  ||||||||||    
T  72125 ataccatactctacttatcactttattacttggttaacaatttggtacacttac 72072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 6385 - 6303
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||  | |||| |||| |||||||||||||| |||||||||||||| | ||||||| |||||||||||| ||||||    
T  6385 aaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatacgatactttacttatgactttattacttcgtaaac 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 39655 - 39586
Alignment:
Q  178 aaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||| |||||||||||||  ||||||||| |||||||||||||||||| ||||  ||||||||    
T  39655 aaacaacaatcaatgtggatacgatgctctacttatcactttattacttggtaaataattttgtacactt 39586  T

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Target: scaffold0024; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 39792 - 39735
Alignment:
Q  42 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 101  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||    
T  39792 taaccgctgcttacttttctgcaacc-aaaacaggt-aacttgctctgttgcaaacagat 39735  T

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Target: scaffold0019 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 181706 - 181786
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 231  Q
    |||||||||||||| | ||||||| || |||| ||||||||||||||||||||| || | |||| |||||||||||||||||    
T  181706 aaaataagtaacacgacttatttggacaaaacgacaatctatgtggatacgatactc-atttatcactttattacttggtaa 181786  T

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Target: scaffold0019; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 11338 - 11242
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||  |||||| ||||   |||||||||||| |||| |||| |||| ||||||||| ||||||||| ||| ||||||||| |||||||||    
T  11338 aaataagtaatgcaaattgtttggttgaaacaacaatccatgtagatatgatactctacttatcactttattatttgataaacaatttagtacactt 11242  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 76626 - 76439
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    ||||||||| ||||||| || ||||||||||||| |||||||||||||||||| ||||| || || ||| | || |||| ||||||           |||    
T  76626 gattcgaagaatcctaatcggtgcttacttttctacaaccaaaaacaggtaaatttgctatgttgtaaacatataaaatttgcaac-----------taa 76538  T
Q  128 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattactt 226  Q
    |||||||| | ||||   |||||||||||||||||  |||| || | |||||| |||||||  |||||||| |||| |||||||| | ||||||||||||    
T  76537 cttttataccctcaa--ctacaaaaataagtaacaagaattgttcggacgaaagaacaatccctgtggatatgatactctacttactaactttattactt 76440  T

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Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 234465 - 234362
Alignment:
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    |||||||||||  || |||||||||||||||||| |||  |||| || | ||||||  ||||||| ||||| ||||||| | ||||||| ||||||||||    
T  234465 taacttttatagagttaaacttacaaaaataagtgacaagaattgttcggacgaaaggacaatctctgtgggtacgatactatacttatcactttattac 234366  T
Q  225 ttgg 228  Q
    ||||    
T  234365 ttgg 234362  T

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Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 48162 - 48273
Alignment:
Q  118 taacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattact 217  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| | || || |||| |||||   |||||| ||   ||||||||| ||||||||| |||    
T  48162 taacccttatcttttacatcgtcaa-cttacaaaaataagtaagagaa-ttgtttggacgaattgacaatccata--gatacgatactctacttatcact 48257  T
Q  218 ttattacttggtaaac 233  Q
    ||||||||||||||||    
T  48258 ttattacttggtaaac 48273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 54960 - 54862
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaa-caacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||| |||  |||||  |||||| | ||||||  ||||||||| ||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  54960 aaaataagtaacgcaagctatttagacgaaaacgacaatccctgtggatacaatactctacttatcactttattacttggtaaacgatttggtacactt 54862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 266 - 472
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgca--actttataaccc-t 124  Q
    ||||||||| |||||||| ||||||||  |||||  ||||||||||||||  |||||||||  |||||  |||| |||  ||||  ||||| |||||| |    
T  266 gattcgaagaatcctaacggctgcttatatttctaaaaccaaaaacaggt-tacttgctctattgcaagcagataaaaattgcaagactttctaaccctt 364  T
Q  125 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 224  Q
    || ||||||||||||| |||||| | |||||  ||||   |||| |||| ||||||  ||||||  ||| ||||||||| ||||| ||| ||||||||||    
T  365 tatcttttatatcgtc-aacttatataaatatctaacgagaattgtttggacgaaatgacaatccctgttgatacgatactctacgtatcactttattac 463  T
Q  225 ttggtaaac 233  Q
    || ||||||    
T  464 tttgtaaac 472  T

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Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 15498 - 15547
Alignment:
Q  183 acaatctatgtggatacgatattctacttattactttattacttggtaaa 232  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  15498 acaatccatgtggatacgatactctacatattactttattacttggtaaa 15547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 168299 - 168395
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||| |  |||||  | ||||| ||||||  ||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  168299 aaaataagtaacacgagctatttagaagaaacgacaatcc-tgtggatacgatactctacttatcactttattacttggtaaacgatttggtacactt 168395  T

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Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 69301 - 69204
Alignment:
Q  29 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctta 126  Q
    |||| ||| ||||||||||||||||| |||||||||   || ||||||||||||| ||||| |||||| |||| |||  ||||| | |||||||||||    
T  69301 attctaagaatcctaaccgctgcttatttttctgcatgtaagaacaggtaaactttctctgttgcaaacagataaaaattgcaattctataaccctta 69204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 3856 - 3801
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactt 83  Q
    |||| |||| ||||||||||| |||||||||||||||| |||||| ||||||||||    
T  3856 gattggaagaatcctaaccgcagcttacttttctgcaaacaaaaataggtaaactt 3801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 1792 - 1734
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 249  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||| ||  ||||||||||    
T  1792 tgtggatacgatactctacttatcacttttttacttggtaaacagtttggtacacttac 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 4484 - 4566
Alignment:
Q  151 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 233  Q
    ||||||||||||| |||| ||| |||||||  |||||| |||||||||||||| ||| ||||  | ||| |||||||||||||    
T  4484 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaac 4566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 807 - 730
Alignment:
Q  170 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||| ||||||| ||||||  ||| ||||| ||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  807 tttggacgaaacgacaatccttgttgatacaatactctacttatcactttattacttggtaaacgatttggtacactt 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 35759 - 35553
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 127  Q
    |||| |||| ||| |||||||||||||| ||||||||||||||| ||||||| |||||| || |||| | | || |||  ||||| | | |||||||| |    
T  35759 gatttgaagaatcttaaccgctgcttacctttctgcaaccaaaa-caggtaa-cttgctttgttgcagacaaataaaaattgcaaatctctaacccttta 35662  T
Q  128 ---cttttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttat 221  Q
       |||||||   ||| |||||||||   ||||||||||  | |||| |||| ||||||| | |||| |||||||||| ||| |||| |||| |||||||    
T  35661 actcttttattttatcatcaaactta---aaataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactctatttatcactttat 35565  T
Q  222 tacttggtaaac 233  Q
    |||||| |||||    
T  35564 tacttgataaac 35553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 2818 - 2882
Alignment:
Q  150 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttatt 214  Q
    |||||||||||||| |||| |||| ||||||| |||||  |||||||||||||| || |||||||    
T  2818 aaaataagtaacacgaattgtttggacgaaacgacaattcatgtggatacgatactcaacttatt 2882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 6592 - 6644
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    ||||||||| ||||| |||||||||||||||| || ||||||||||| |||||    
T  6592 gattcgaagaatcctgaccgctgcttacttttttgaaaccaaaaacaagtaaa 6644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 5982 - 6068
Alignment:
Q  28 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 114  Q
    ||||||||| ||||| |||| | ||||||||||| |||||||||||| ||||| | |||||  |||||| |||| |||  |||||||    
T  5982 gattcgaagaatcctgaccgttacttacttttctacaaccaaaaacaagtaaattcgctctattgcaaacagataaaaattgcaact 6068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 2435 - 2372
Alignment:
Q  184 caatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||| |||||||||||||| |||||||||  |||||||| ||||||||| |||  ||||||||    
T  2435 caatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacactt 2372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 2466 - 2403
Alignment:
Q  184 caatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||| |||||||||||||| |||||||||  |||||||| ||||||||| |||  ||||||||    
T  2466 caatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacactt 2403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 3352 - 3314
Alignment:
Q  42 taaccgctgcttacttttctgcaaccaaaaacaggtaaa 80  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  3352 taaccgctgcttacttttctataaccaaaaacaggtaaa 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 3210 - 3155
Alignment:
Q  191 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    ||||||||||||| ||||| ||  |||||||||||||||||||||||  ||||||||    
T  3210 tgtggatacgatactctacatac-actttattacttggtaaacaattttgtacactt 3155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 30006 - 29909
Alignment:
Q  149 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 247  Q
    |||||||||||||  ||||| |||||  || || ||||||| | ||||||| ||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  30006 aaaaataagtaacgtaaattgtttgacagatacgacaatctctatggataccatactctacttac-actttattacttggtaaacgatttggtacactt 29909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 89742 - 89774
Alignment:
Q  39 tcctaaccgctgcttacttttctgcaaccaaaa 71  Q
    |||||||||||||||| ||||||||||||||||    
T  89742 tcctaaccgctgcttatttttctgcaaccaaaa 89774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 114699 - 114659
Alignment:
Q  39 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaa 79  Q
    ||||||||| || || |||||||||||||||||||||||||    
T  114699 tcctaaccgttgtttccttttctgcaaccaaaaacaggtaa 114659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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