View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5096-Insertion-4 (Length: 761)

Name: NF5096-Insertion-4
Description: NF5096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5096-Insertion-4
NF5096-Insertion-4
[»] chr5 (8 HSPs)
chr5 (375-761)||(1499923-1500310)
chr5 (562-752)||(1478691-1478881)
chr5 (564-752)||(1482885-1483073)
chr5 (556-752)||(1487362-1487558)
chr5 (556-752)||(1505669-1505865)
chr5 (106-172)||(1500427-1500493)
chr5 (556-749)||(1492863-1493056)
chr5 (629-741)||(1509816-1509928)
[»] chr2 (1 HSPs)
chr2 (564-743)||(24163032-24163211)
[»] chr7 (7 HSPs)
chr7 (572-752)||(46706238-46706418)
chr7 (579-747)||(5285005-5285173)
chr7 (571-752)||(5311089-5311270)
chr7 (556-752)||(5315803-5315999)
chr7 (556-752)||(5303188-5303384)
chr7 (570-752)||(5288945-5289127)
chr7 (176-251)||(6926225-6926294)
[»] chr1 (3 HSPs)
chr1 (579-747)||(44129271-44129439)
chr1 (579-747)||(44133476-44133644)
chr1 (581-747)||(44141898-44142064)
[»] chr4 (1 HSPs)
chr4 (176-251)||(501482-501551)


Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 375 - 761
Target Start/End: Complemental strand, 1500310 - 1499923
Alignment:
Q  375 ttgtaacttccattatttttatggnnnnnnngaagagaccacactagttatggtataaagctatttaccatatcaaatatacatacatgcatacacatat 474  Q
    ||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1500310 ttgtaacttccattatttttatggaaaaaaagaagagaccacactaggtatggtataaagctatttaccatatcaaatatacatacatgcatacacatat 1500211  T
Q  475 atataactttctgtatttattcttcatataaatagaaacttaggcgagatggaaaatattacataattnnnnnnnnnn-ttgagcatcttatataaccac 573  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||           |||||||||||||||||| |     
T  1500210 atataactttctgtatttattcttcataaagatagaaacttaggcgagatggaaaatattacataattaaaaaaaaaaattgagcatcttatataactat 1500111  T
Q  574 actatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcgatcttgagtc 673  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1500110 actatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcgatcttgagtc 1500011  T
Q  674 gatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctagcgaccctca 761  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  1500010 gatttccttctcatctcattcaagatgaacaatacagatgcactagacatattaccatattcactaagcacttccctaacgaccctca 1499923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 562 - 752
Target Start/End: Complemental strand, 1478881 - 1478691
Alignment:
Q  562 ttatataaccacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagt 661  Q
    ||||||| |||| ||||| | |||||| ||||||||||| ||||||||||||||||  ||||| |||||||| ||  | |||||||||||||| ||||||    
T  1478881 ttatatagccacgctatggagaacaactgtttcaatggtgagtccaggtccaaagccaaacaacacaccccagtcaaggccttcacctgtggttttaagt 1478782  T
Q  662 cgatcttgagtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctag 752  Q
    |  ||||||| ||||||| ||||||||||||||||||||||||||||  || | || ||||| ||||||||||||||||| ||||||||||    
T  1478781 ccctcttgagccgatttctttctcatctcatccaagatgaacaatacacatgcgcttgacatgttaccatattcactaagtacttccctag 1478691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 564 - 752
Target Start/End: Complemental strand, 1483073 - 1482885
Alignment:
Q  564 atataaccacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcg 663  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||| |||||||| ||  | ||||| |||||||||||||| |     
T  1483073 atatagccacactgtgcaaaacaacggtttcaatggtaagtccaggtccaaagccgaacaacacaccccaatcaagcccttctcctgtggtcttaagccc 1482974  T
Q  664 atcttgagtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctag 752  Q
     |||||||  |||||| ||| ||||||||| ||||| ||||||||  || |||| ||||| ||||||||||||||||| ||||| ||||    
T  1482973 ctcttgagaagatttctttcgcatctcatctaagataaacaatacacatgcacttgacatgttaccatattcactaagtacttctctag 1482885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 556 - 752
Target Start/End: Complemental strand, 1487558 - 1487362
Alignment:
Q  556 agcatcttatataaccacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtc 655  Q
    ||||||| ||||||||| |||||| | |||||||||||||||||||||||||||||||||||  ||||| || |||||||   ||||||| |||||||||    
T  1487558 agcatctcatataaccatactatggagaacaacagtttcaatggtaagtccaggtccaaagccgaacaacactccccatttaagtccttctcctgtggtc 1487459  T
Q  656 ttaagtcgatcttgagtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctag 752  Q
    | |||||  |||||||  ||| || ||||||| |||||||| || ||||||||  |  |||| ||||| ||||||||||||||||| ||||||||||    
T  1487458 tcaagtccctcttgagctgatctctttctcatttcatccaatataaacaatacacaagcacttgacatgttaccatattcactaagtacttccctag 1487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 556 - 752
Target Start/End: Complemental strand, 1505865 - 1505669
Alignment:
Q  556 agcatcttatataaccacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtc 655  Q
    ||||||| ||||| | |||||| ||||||||||||||||||| |||||||| ||||||||||  || || ||||||||||| |||||||| || || |||    
T  1505865 agcatctcatatagcaacactacgcaaaacaacagtttcaatagtaagtcccggtccaaagccaaataacacaccccattcatgtccttctccggtagtc 1505766  T
Q  656 ttaagtcgatcttgagtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctag 752  Q
    || | || ||||||||  |||||| ||||||| ||||| ||||| ||||| ||  || |||| |||||||| |||||||||||||||||||| ||||    
T  1505765 ttcaatccatcttgagctgatttctttctcatttcatctaagataaacaaaacacatgcacttgacatatttccatattcactaagcacttctctag 1505669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 1500493 - 1500427
Alignment:
Q  106 atagatgtctatgccttcatacaatgatgtttccgtaggtatatattttctatacctacgattttat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1500493 atagatgtctatgccttcatacaatgatgtttccgtaggtatatattttctatacctacgattttat 1500427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 556 - 749
Target Start/End: Complemental strand, 1493056 - 1492863
Alignment:
Q  556 agcatcttatataaccacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtc 655  Q
    ||||||||||||| | |||||  |||| |||||||| |||||||||||||| ||||||||||  || |  ||||||||||| || ||||| || || |||    
T  1493056 agcatcttatatagctacactgcgcaagacaacagtctcaatggtaagtcctggtccaaagccgaatagcacaccccattcatgcccttctccggttgtc 1492957  T
Q  656 ttaagtcgatcttgagtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccc 749  Q
    || |  | || |||||| |||||| ||||||| ||||||||||| ||||||||  || |||| |||||||| ||||||||||| ||||| ||||    
T  1492956 ttcaaaccattttgagttgatttctttctcatttcatccaagataaacaatacacatgcacttgacatatttccatattcacttagcacctccc 1492863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 629 - 741
Target Start/End: Complemental strand, 1509928 - 1509816
Alignment:
Q  629 ccccattcttgtccttcacctgtggtcttaagtcgatcttgagtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattac 728  Q
    ||||||||  ||||||||||  ||||||||| ||  |||||||  |||||| |||||||||| || ||||||||||||||  || |||| ||||||||||    
T  1509928 ccccattcaagtccttcaccaatggtcttaattccctcttgagctgatttctttctcatctcgtctaagatgaacaatacacatgcacttgacatattac 1509829  T
Q  729 catattcactaag 741  Q
    |||||||||||||    
T  1509828 catattcactaag 1509816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 4e-37; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 564 - 743
Target Start/End: Original strand, 24163032 - 24163211
Alignment:
Q  564 atataaccacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcg 663  Q
    ||||| ||||||| || | |||||  ||||||||||||||||| || |||||||||||||| |||||||||||  | ||||| ||||||||||| ||||     
T  24163032 atatagccacactgtggagaacaatcgtttcaatggtaagtcctggcccaaagcttaacaacacaccccattcaagcccttctcctgtggtctttagtcc 24163131  T
Q  664 atcttgagtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagca 743  Q
    |||||||| ||||||  ||||||||||||| |||||||| |||||  || |||| ||||| |||||||||||||||||||    
T  24163132 atcttgagccgatttgtttctcatctcatctaagatgaataatacacatgcacttgacatgttaccatattcactaagca 24163211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 572 - 752
Target Start/End: Original strand, 46706238 - 46706418
Alignment:
Q  572 acactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcgatcttgag 671  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||  || || |||||||||||  ||||||| ||||| ||||| || | ||||||||    
T  46706238 acactgtgcaaaacaacagtttctatggtaagtcctggtccaaagccaaataacacaccccattcaagtccttctcctgttgtcttcagaccatcttgag 46706337  T
Q  672 tcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctag 752  Q
    | |||||| ||||||| ||||| ||||| ||||| ||  || |||| |||||||| |||||||||||||||||||| ||||    
T  46706338 ttgatttctttctcatttcatctaagataaacaaaacacatgcacttgacatatttccatattcactaagcacttctctag 46706418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 579 - 747
Target Start/End: Complemental strand, 5285173 - 5285005
Alignment:
Q  579 gcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcgatcttgagtcgattt 678  Q
    |||||||||| ||||||||||||||||| |||||||| |  || ||||||||||||||  ||||||| || || ||||| | ||  | |||||| |||||    
T  5285173 gcaaaacaacggtttcaatggtaagtcctggtccaaaaccaaataatacaccccattcaagtccttctcccgttgtcttcaatccgttttgagttgattt 5285074  T
Q  679 ccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttc 747  Q
    | ||||||| ||||||||||| ||||| ||  || |||| |||||||| ||||||||||| ||||||||    
T  5285073 ctttctcatttcatccaagataaacaaaacacatgcacttgacatatttccatattcactgagcacttc 5285005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 571 - 752
Target Start/End: Complemental strand, 5311270 - 5311089
Alignment:
Q  571 cacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcgatcttga 670  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||| |  || ||||||||||| ||  ||||||| || || ||||| | ||  | ||||    
T  5311270 cacactacgcaaaacaactgtttcaatggtaagtcctggtccaaaaccaaataatacaccccactcaagtccttctcccgttgtcttcaatccgttttga 5311171  T
Q  671 gtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctag 752  Q
    || |||||| ||||||| ||||| ||||| ||||| ||  || |||| |||||||| ||||||||||| |||||||| ||||    
T  5311170 gttgatttctttctcatttcatctaagataaacaaaacacatgcacttgacatatttccatattcactgagcacttctctag 5311089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 556 - 752
Target Start/End: Complemental strand, 5315999 - 5315803
Alignment:
Q  556 agcatcttatataaccacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtc 655  Q
    ||||||| ||||| |||| ||  |||||||||| ||||||||||||||||| |||||||| |  || ||||||||||||||  ||||||| || || |||    
T  5315999 agcatctcatatagccacgctgcgcaaaacaaccgtttcaatggtaagtcctggtccaaaaccaaataatacaccccattcaagtccttctcccgttgtc 5315900  T
Q  656 ttaagtcgatcttgagtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctag 752  Q
    || | ||  |||| ||| |||||| ||||||| ||||| ||||| ||||| ||  |  |||| |||||||| ||||||||||| |||||||| ||||    
T  5315899 ttcaatccgtctttagttgatttctttctcatttcatctaagataaacaaaacacacgcacttgacatatttccatattcactgagcacttctctag 5315803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 556 - 752
Target Start/End: Complemental strand, 5303384 - 5303188
Alignment:
Q  556 agcatcttatataaccacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtc 655  Q
    ||||||| ||||| | |||||  |||||||||| |||||||| |||||||| |||||||| |  || || |||||||||||  ||||||| || || |||    
T  5303384 agcatctcatatagcgacactgcgcaaaacaaccgtttcaattgtaagtcctggtccaaaaccaaataacacaccccattcaagtccttctccagttgtc 5303285  T
Q  656 ttaagtcgatcttgagtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctag 752  Q
    || |  | ||||| ||| |||||| ||||||| ||||| ||||| ||||| ||  || |||| |||||||| ||||||||||| |||||||| ||||    
T  5303284 ttcaacccatctttagttgatttctttctcatttcatctaagataaacaaaacacatgcacttgacatatttccatattcactgagcacttctctag 5303188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 570 - 752
Target Start/End: Original strand, 5288945 - 5289127
Alignment:
Q  570 ccacactatgcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcgatcttg 669  Q
    |||||||| | |||||||||||||||||||||||||| |||||||| |  || || |||||||||||  ||||||| || || ||||| | ||  |||      
T  5288945 ccacactacgtaaaacaacagtttcaatggtaagtcctggtccaaaaccaaataagacaccccattcaagtccttctccagttgtcttcaatccgtctat 5289044  T
Q  670 agtcgatttccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttccctag 752  Q
     || |||||| ||||||| ||||| ||||| ||||| ||  || |||| |||||||| ||||||||||| |||||||| ||||    
T  5289045 ggttgatttctttctcatttcatctaagataaacaaaacacatgcacttgacatatttccatattcactgagcacttctctag 5289127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 6926225 - 6926294
Alignment:
Q  176 aaaataaagatttagttgaatatgttagtgattcatatgnnnnnnntcaattaatttggaaagaattaattctttc 251  Q
    ||||||||||||||||||||||||      |||||||||       ||||||||||||||||||||||||||||||    
T  6926225 aaaataaagatttagttgaatatg------attcatatgaaaaaaatcaattaatttggaaagaattaattctttc 6926294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 579 - 747
Target Start/End: Complemental strand, 44129439 - 44129271
Alignment:
Q  579 gcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcgatcttgagtcgattt 678  Q
    ||||||||||||||||||| ||||| || ||||||||||  || || |||||||| ||  ||||||| || |||||||| |||| ||||||||  || ||    
T  44129439 gcaaaacaacagtttcaatagtaagacctggtccaaagccaaataaaacaccccactcaagtccttctcccgtggtcttcagtccatcttgagctgactt 44129340  T
Q  679 ccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttc 747  Q
    | ||||||| ||||| ||||| ||||| ||  |  |||| |||||||| ||||||||||||||||||||    
T  44129339 ctttctcatttcatctaagataaacaaaacacaagcacttgacatatttccatattcactaagcacttc 44129271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 579 - 747
Target Start/End: Complemental strand, 44133644 - 44133476
Alignment:
Q  579 gcaaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcgatcttgagtcgattt 678  Q
    ||||||||||||||||||||||||| || ||||||||||  || || |||||  ||||  ||||||| ||||||||||| | || ||||||||  || ||    
T  44133644 gcaaaacaacagtttcaatggtaagacccggtccaaagccaaataaaacaccaaattcaagtccttctcctgtggtcttcaatccatcttgagctgactt 44133545  T
Q  679 ccttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttc 747  Q
    | ||||||| ||||| ||||| ||||| ||  |  |||| |||||||| ||||||||||||||||||||    
T  44133544 ctttctcatttcatctaagataaacaaaacacaggcacttgacatatttccatattcactaagcacttc 44133476  T

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Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 581 - 747
Target Start/End: Complemental strand, 44142064 - 44141898
Alignment:
Q  581 aaaacaacagtttcaatggtaagtccaggtccaaagcttaacaatacaccccattcttgtccttcacctgtggtcttaagtcgatcttgagtcgatttcc 680  Q
    ||||||||||||||||||||||| || ||||||||||  || || |||||  | ||  ||||||| || |||||||| | || ||||||||  || |||     
T  44142064 aaaacaacagtttcaatggtaagacccggtccaaagccaaataaaacaccaaactcaagtccttctcccgtggtcttcaatccatcttgagctgacttct 44141965  T
Q  681 ttctcatctcatccaagatgaacaatacggatacactagacatattaccatattcactaagcacttc 747  Q
    ||||||| ||||| ||||| ||||| ||  |  |||| |||||||| ||||||||||||||||||||    
T  44141964 ttctcatttcatctaagataaacaaaacacaggcacttgacatatttccatattcactaagcacttc 44141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 501482 - 501551
Alignment:
Q  176 aaaataaagatttagttgaatatgttagtgattcatatgnnnnnnntcaattaatttggaaagaattaattctttc 251  Q
    ||||||||||||||||||||||||      |||||||||       ||||||||||||||||||||||||||||||    
T  501482 aaaataaagatttagttgaatatg------attcatatgaaaaaaatcaattaatttggaaagaattaattctttc 501551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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