View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5096_low_1 (Length: 651)

Name: NF5096_low_1
Description: NF5096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5096_low_1
NF5096_low_1
[»] chr1 (70 HSPs)
chr1 (11-630)||(3265386-3266006)
chr1 (421-605)||(1153672-1153855)
chr1 (361-604)||(1240365-1240612)
chr1 (362-577)||(45385209-45385426)
chr1 (421-539)||(8246730-8246851)
chr1 (362-577)||(23897875-23898085)
chr1 (11-69)||(4566572-4566630)
chr1 (11-69)||(33700767-33700825)
chr1 (11-69)||(36371494-36371552)
chr1 (462-583)||(35405375-35405496)
chr1 (424-542)||(33735760-33735878)
chr1 (423-583)||(35204188-35204344)
chr1 (423-512)||(16141556-16141645)
chr1 (12-69)||(27567117-27567174)
chr1 (13-69)||(2219996-2220052)
chr1 (18-69)||(15786321-15786372)
chr1 (471-630)||(29062288-29062447)
chr1 (11-69)||(8177176-8177234)
chr1 (11-69)||(9165189-9165247)
chr1 (11-69)||(10526847-10526905)
chr1 (11-69)||(17745250-17745308)
chr1 (11-69)||(51703803-51703861)
chr1 (13-55)||(51814532-51814574)
chr1 (11-69)||(52336768-52336826)
chr1 (12-69)||(11063580-11063637)
chr1 (486-583)||(22667164-22667261)
chr1 (424-493)||(29664192-29664261)
chr1 (482-583)||(49762420-49762520)
chr1 (11-51)||(2799904-2799944)
chr1 (11-58)||(1247148-1247195)
chr1 (18-65)||(6122822-6122869)
chr1 (18-69)||(19528328-19528379)
chr1 (11-69)||(50919978-50920036)
chr1 (19-52)||(21392878-21392911)
chr1 (18-51)||(38947473-38947506)
chr1 (11-51)||(8904456-8904496)
chr1 (13-69)||(12587294-12587350)
chr1 (426-474)||(30717893-30717941)
chr1 (390-446)||(35405291-35405346)
chr1 (12-52)||(44961806-44961846)
chr1 (403-450)||(40869-40916)
chr1 (22-57)||(15065001-15065036)
chr1 (18-69)||(16169979-16170030)
chr1 (390-453)||(23935155-23935218)
chr1 (18-69)||(31383799-31383850)
chr1 (18-69)||(37400298-37400349)
chr1 (22-69)||(52116786-52116833)
chr1 (11-69)||(6650619-6650677)
chr1 (12-50)||(12662325-12662363)
chr1 (11-69)||(21547474-21547532)
chr1 (18-67)||(4824997-4825046)
chr1 (12-69)||(9879462-9879519)
chr1 (12-57)||(14787331-14787376)
chr1 (20-69)||(21184391-21184440)
chr1 (18-67)||(31605849-31605898)
chr1 (519-603)||(36382974-36383059)
chr1 (18-51)||(43446005-43446038)
chr1 (18-51)||(45266876-45266909)
chr1 (13-50)||(51281394-51281431)
chr1 (18-51)||(52029938-52029971)
chr1 (13-69)||(1094549-1094605)
chr1 (18-54)||(7219919-7219955)
chr1 (13-69)||(9643805-9643861)
chr1 (18-50)||(24019066-24019098)
chr1 (11-67)||(29056404-29056460)
chr1 (558-598)||(30718216-30718256)
chr1 (29-69)||(31794276-31794316)
chr1 (29-69)||(35562749-35562789)
chr1 (11-51)||(40810509-40810549)
chr1 (18-66)||(48391333-48391381)
[»] chr6 (45 HSPs)
chr6 (362-621)||(12174259-12174518)
chr6 (421-606)||(9815619-9815803)
chr6 (423-604)||(31787815-31787993)
chr6 (371-583)||(10668850-10669059)
chr6 (401-583)||(35121917-35122102)
chr6 (416-630)||(34573110-34573324)
chr6 (424-583)||(34540829-34540988)
chr6 (482-583)||(33344880-33344981)
chr6 (482-583)||(34329792-34329893)
chr6 (444-583)||(31153606-31153745)
chr6 (421-603)||(33607007-33607192)
chr6 (402-477)||(34969375-34969450)
chr6 (13-69)||(33549128-33549184)
chr6 (18-69)||(10338175-10338226)
chr6 (399-461)||(6549785-6549847)
chr6 (11-69)||(28363961-28364019)
chr6 (12-69)||(12188298-12188355)
chr6 (11-71)||(4105073-4105133)
chr6 (421-469)||(6274014-6274062)
chr6 (390-450)||(33344763-33344823)
chr6 (20-63)||(23910114-23910157)
chr6 (18-69)||(34444827-34444878)
chr6 (18-64)||(20213070-20213116)
chr6 (18-64)||(22107093-22107139)
chr6 (23-69)||(31622997-31623043)
chr6 (399-467)||(4337976-4338044)
chr6 (13-69)||(6385886-6385942)
chr6 (524-628)||(35067103-35067207)
chr6 (18-69)||(19638005-19638056)
chr6 (18-69)||(31847086-31847137)
chr6 (390-448)||(13229274-13229332)
chr6 (20-70)||(13574045-13574094)
chr6 (20-70)||(13576584-13576633)
chr6 (11-69)||(14278105-14278163)
chr6 (11-57)||(17328258-17328304)
chr6 (518-584)||(18991742-18991808)
chr6 (11-69)||(27989651-27989709)
chr6 (13-51)||(28841456-28841494)
chr6 (18-51)||(14199948-14199981)
chr6 (18-67)||(14557988-14558037)
chr6 (13-50)||(20744505-20744542)
chr6 (503-576)||(34969848-34969920)
chr6 (13-69)||(12234503-12234559)
chr6 (11-51)||(15951296-15951336)
chr6 (396-490)||(33871074-33871164)
[»] chr5 (45 HSPs)
chr5 (396-583)||(3193491-3193678)
chr5 (423-583)||(32257654-32257814)
chr5 (423-552)||(502805-502931)
chr5 (423-602)||(16569252-16569429)
chr5 (399-622)||(20870610-20870827)
chr5 (401-556)||(12263642-12263799)
chr5 (423-556)||(16570492-16570625)
chr5 (11-68)||(14285186-14285243)
chr5 (11-69)||(25627081-25627139)
chr5 (11-69)||(34984830-34984888)
chr5 (376-553)||(36160997-36161170)
chr5 (391-475)||(7887264-7887348)
chr5 (423-630)||(39542410-39542615)
chr5 (11-69)||(7918463-7918521)
chr5 (11-69)||(16773831-16773889)
chr5 (12-69)||(25979194-25979251)
chr5 (462-606)||(7886560-7886702)
chr5 (424-603)||(8934060-8934240)
chr5 (11-51)||(43442238-43442278)
chr5 (18-69)||(87424-87475)
chr5 (22-69)||(892479-892526)
chr5 (22-69)||(30883203-30883250)
chr5 (423-553)||(3596911-3597041)
chr5 (11-69)||(18595995-18596053)
chr5 (12-69)||(21549132-21549189)
chr5 (18-66)||(84851-84899)
chr5 (11-51)||(29173532-29173572)
chr5 (11-51)||(37258360-37258400)
chr5 (18-69)||(16436642-16436692)
chr5 (22-69)||(16457834-16457881)
chr5 (18-69)||(17028265-17028316)
chr5 (11-50)||(21086757-21086796)
chr5 (18-69)||(30109309-30109360)
chr5 (23-69)||(4793094-4793140)
chr5 (13-51)||(8779306-8779344)
chr5 (421-467)||(10325717-10325763)
chr5 (11-69)||(29075805-29075863)
chr5 (23-57)||(37148062-37148096)
chr5 (18-51)||(3315257-3315290)
chr5 (12-69)||(6844753-6844810)
chr5 (18-67)||(15485421-15485469)
chr5 (9-69)||(17155848-17155906)
chr5 (13-69)||(8278271-8278327)
chr5 (15-51)||(24907531-24907567)
chr5 (11-51)||(31074274-31074314)
[»] chr8 (60 HSPs)
chr8 (398-583)||(13580327-13580512)
chr8 (362-522)||(34141963-34142123)
chr8 (402-553)||(26835593-26835744)
chr8 (462-584)||(13236221-13236343)
chr8 (397-541)||(22930295-22930439)
chr8 (423-583)||(9191200-9191351)
chr8 (362-539)||(22486608-22486784)
chr8 (413-604)||(31383464-31383655)
chr8 (421-621)||(4350596-4350802)
chr8 (471-598)||(31277936-31278064)
chr8 (18-69)||(19703488-19703539)
chr8 (421-491)||(28376655-28376725)
chr8 (11-69)||(33017238-33017296)
chr8 (498-621)||(24606847-24606969)
chr8 (11-69)||(8794339-8794397)
chr8 (13-69)||(968386-968442)
chr8 (13-69)||(3624604-3624660)
chr8 (18-69)||(16852364-16852415)
chr8 (460-583)||(43872544-43872667)
chr8 (11-69)||(6536544-6536602)
chr8 (19-69)||(12988452-12988502)
chr8 (11-69)||(18540322-18540380)
chr8 (471-605)||(41849429-41849562)
chr8 (25-69)||(2203516-2203560)
chr8 (424-472)||(12181824-12181872)
chr8 (13-69)||(12281518-12281574)
chr8 (424-472)||(12426252-12426300)
chr8 (370-453)||(13236110-13236194)
chr8 (18-65)||(11819804-11819851)
chr8 (18-65)||(27750758-27750805)
chr8 (18-69)||(28783084-28783135)
chr8 (18-69)||(29858050-29858101)
chr8 (11-69)||(35690058-35690116)
chr8 (18-68)||(44780115-44780165)
chr8 (18-67)||(18897192-18897241)
chr8 (22-67)||(26688891-26688936)
chr8 (12-53)||(31408117-31408158)
chr8 (11-51)||(23361643-23361683)
chr8 (11-55)||(24675506-24675550)
chr8 (18-50)||(33727874-33727906)
chr8 (471-583)||(39295475-39295586)
chr8 (26-69)||(5264568-5264611)
chr8 (11-69)||(20994451-20994510)
chr8 (13-56)||(22193360-22193403)
chr8 (18-69)||(28898490-28898541)
chr8 (30-69)||(33823084-33823123)
chr8 (11-69)||(3305182-3305240)
chr8 (425-467)||(21348439-21348481)
chr8 (22-67)||(3524406-3524451)
chr8 (11-68)||(13129693-13129750)
chr8 (18-51)||(21566783-21566816)
chr8 (462-583)||(26801891-26802011)
chr8 (18-51)||(36205237-36205270)
chr8 (22-54)||(8059671-8059703)
chr8 (18-50)||(11928732-11928764)
chr8 (18-62)||(18546363-18546407)
chr8 (18-50)||(28787497-28787529)
chr8 (13-69)||(31087254-31087310)
chr8 (13-69)||(34628666-34628722)
chr8 (12-48)||(43594313-43594349)
[»] chr4 (79 HSPs)
chr4 (396-583)||(23870020-23870206)
chr4 (396-583)||(2113812-2113999)
chr4 (424-552)||(36071557-36071685)
chr4 (424-599)||(12320404-12320580)
chr4 (362-605)||(3643092-3643333)
chr4 (424-570)||(7102144-7102289)
chr4 (362-604)||(7853234-7853475)
chr4 (421-554)||(29118469-29118603)
chr4 (425-599)||(35372063-35372230)
chr4 (11-69)||(16581717-16581775)
chr4 (12-70)||(23377979-23378037)
chr4 (11-69)||(37109345-37109403)
chr4 (423-556)||(4596455-4596588)
chr4 (421-583)||(5627494-5627651)
chr4 (12-69)||(7292793-7292850)
chr4 (429-621)||(43515787-43515980)
chr4 (11-69)||(7949448-7949506)
chr4 (11-69)||(11592147-11592205)
chr4 (497-583)||(48653742-48653828)
chr4 (11-68)||(37274453-37274510)
chr4 (423-602)||(53178749-53178926)
chr4 (421-604)||(25779590-25779773)
chr4 (18-69)||(38869792-38869843)
chr4 (534-628)||(8732999-8733093)
chr4 (423-541)||(15986881-15986999)
chr4 (11-69)||(46545735-46545793)
chr4 (408-478)||(47059675-47059745)
chr4 (408-478)||(47082057-47082127)
chr4 (13-66)||(2185028-2185081)
chr4 (11-68)||(2622389-2622446)
chr4 (18-71)||(5450115-5450168)
chr4 (18-70)||(37720215-37720267)
chr4 (27-67)||(47202433-47202473)
chr4 (13-69)||(49576890-49576946)
chr4 (423-494)||(12167050-12167121)
chr4 (18-69)||(31759659-31759710)
chr4 (18-65)||(46329192-46329239)
chr4 (11-69)||(1730483-1730541)
chr4 (11-69)||(10048004-10048062)
chr4 (462-584)||(20811475-20811597)
chr4 (531-633)||(37226342-37226444)
chr4 (445-495)||(40807927-40807977)
chr4 (14-55)||(21775919-21775960)
chr4 (18-67)||(32992638-32992687)
chr4 (18-51)||(46295139-46295172)
chr4 (11-51)||(4249219-4249259)
chr4 (18-66)||(39509097-39509145)
chr4 (13-69)||(42644906-42644962)
chr4 (11-51)||(51622527-51622567)
chr4 (22-69)||(4483306-4483353)
chr4 (18-65)||(8030205-8030252)
chr4 (18-69)||(19238578-19238629)
chr4 (416-467)||(38087652-38087703)
chr4 (34-69)||(41683773-41683808)
chr4 (18-69)||(47044741-47044792)
chr4 (18-69)||(55427201-55427252)
chr4 (403-449)||(8733167-8733213)
chr4 (11-69)||(19680782-19680840)
chr4 (11-57)||(21404815-21404861)
chr4 (12-46)||(24991574-24991608)
chr4 (11-69)||(33632130-33632188)
chr4 (11-69)||(53496901-53496959)
chr4 (421-495)||(55147883-55147957)
chr4 (18-51)||(30938220-30938253)
chr4 (18-51)||(31826651-31826684)
chr4 (18-67)||(37980149-37980197)
chr4 (401-442)||(48653269-48653310)
chr4 (18-67)||(56409977-56410025)
chr4 (18-54)||(8931085-8931121)
chr4 (18-46)||(9693499-9693527)
chr4 (13-69)||(13015451-13015507)
chr4 (22-54)||(14451751-14451783)
chr4 (21-69)||(17618305-17618353)
chr4 (18-54)||(21375816-21375852)
chr4 (13-69)||(24234669-24234725)
chr4 (21-69)||(24827849-24827897)
chr4 (484-556)||(40807842-40807914)
chr4 (530-606)||(51002624-51002700)
chr4 (483-583)||(55147639-55147739)
[»] chr7 (82 HSPs)
chr7 (398-582)||(35812589-35812774)
chr7 (423-583)||(26914312-26914472)
chr7 (361-583)||(3940621-3940842)
chr7 (364-621)||(40351700-40351956)
chr7 (394-584)||(13431633-13431822)
chr7 (362-630)||(21828100-21828367)
chr7 (361-585)||(9429304-9429527)
chr7 (430-581)||(12177813-12177965)
chr7 (421-583)||(33480460-33480621)
chr7 (462-583)||(3351119-3351240)
chr7 (435-554)||(42335943-42336062)
chr7 (424-554)||(22318662-22318791)
chr7 (462-583)||(26448411-26448533)
chr7 (11-69)||(26459404-26459462)
chr7 (13-69)||(14058277-14058333)
chr7 (13-69)||(14368305-14368361)
chr7 (401-553)||(21129326-21129478)
chr7 (11-69)||(2962483-2962541)
chr7 (11-69)||(21558152-21558210)
chr7 (441-583)||(26912345-26912486)
chr7 (390-467)||(30095845-30095922)
chr7 (12-69)||(43215208-43215265)
chr7 (13-69)||(45709704-45709760)
chr7 (421-480)||(21292802-21292861)
chr7 (18-69)||(22760887-22760938)
chr7 (11-69)||(17113819-17113877)
chr7 (11-68)||(11700190-11700247)
chr7 (12-69)||(23552142-23552199)
chr7 (18-67)||(38374600-38374649)
chr7 (12-69)||(39631868-39631925)
chr7 (11-51)||(9183185-9183225)
chr7 (15-51)||(31835234-31835270)
chr7 (423-583)||(36066113-36066271)
chr7 (18-69)||(7499925-7499976)
chr7 (13-68)||(17041008-17041063)
chr7 (18-69)||(20335832-20335883)
chr7 (18-69)||(30442512-30442563)
chr7 (18-69)||(43590931-43590982)
chr7 (27-69)||(3280495-3280537)
chr7 (13-67)||(5273586-5273640)
chr7 (11-69)||(7721393-7721451)
chr7 (13-67)||(22035424-22035478)
chr7 (18-52)||(29916809-29916843)
chr7 (11-69)||(30579359-30579417)
chr7 (11-69)||(33222394-33222452)
chr7 (15-69)||(48771962-48772016)
chr7 (12-69)||(5830598-5830655)
chr7 (20-69)||(7801204-7801253)
chr7 (462-583)||(15133276-15133397)
chr7 (11-51)||(2882992-2883032)
chr7 (23-67)||(5579240-5579284)
chr7 (11-51)||(13106776-13106816)
chr7 (11-51)||(15137595-15137635)
chr7 (13-69)||(20952145-20952201)
chr7 (11-63)||(21570026-21570078)
chr7 (11-51)||(41519258-41519298)
chr7 (18-69)||(15905675-15905725)
chr7 (12-51)||(18363738-18363777)
chr7 (22-69)||(19553478-19553524)
chr7 (423-474)||(31329665-31329716)
chr7 (424-495)||(32982336-32982407)
chr7 (559-602)||(32982464-32982507)
chr7 (13-52)||(41519106-41519145)
chr7 (18-69)||(42711982-42712033)
chr7 (27-69)||(25021345-25021387)
chr7 (11-69)||(25655222-25655280)
chr7 (18-48)||(30301925-30301955)
chr7 (11-69)||(33869439-33869497)
chr7 (12-65)||(9608624-9608677)
chr7 (12-65)||(9836196-9836249)
chr7 (421-466)||(15134537-15134582)
chr7 (18-51)||(18056776-18056809)
chr7 (16-57)||(18891106-18891147)
chr7 (18-51)||(29385744-29385777)
chr7 (421-450)||(37996507-37996536)
chr7 (24-69)||(42836008-42836053)
chr7 (13-69)||(2446332-2446388)
chr7 (13-69)||(5668567-5668623)
chr7 (18-50)||(29785302-29785334)
chr7 (18-50)||(30217922-30217954)
chr7 (465-545)||(36572901-36572980)
chr7 (524-556)||(37996570-37996602)
[»] chr3 (74 HSPs)
chr3 (398-553)||(33510096-33510252)
chr3 (434-604)||(33682610-33682780)
chr3 (421-604)||(168635-168814)
chr3 (424-586)||(15670919-15671078)
chr3 (398-583)||(8266563-8266749)
chr3 (423-544)||(54417030-54417151)
chr3 (416-556)||(11383584-11383726)
chr3 (456-630)||(27538709-27538881)
chr3 (11-69)||(16354886-16354944)
chr3 (421-604)||(2758073-2758258)
chr3 (11-69)||(27093355-27093413)
chr3 (11-69)||(53412969-53413027)
chr3 (11-68)||(10445133-10445190)
chr3 (482-583)||(11365106-11365207)
chr3 (12-69)||(37788460-37788517)
chr3 (13-69)||(21960575-21960631)
chr3 (11-65)||(15048055-15048109)
chr3 (12-69)||(2667886-2667943)
chr3 (13-62)||(20501727-20501776)
chr3 (12-69)||(32651433-32651490)
chr3 (13-66)||(44743851-44743904)
chr3 (13-69)||(14186672-14186727)
chr3 (18-69)||(8170696-8170747)
chr3 (18-69)||(19154655-19154706)
chr3 (18-65)||(30311334-30311381)
chr3 (421-603)||(39838467-39838645)
chr3 (11-69)||(4222165-4222223)
chr3 (19-69)||(9557344-9557394)
chr3 (423-583)||(17713276-17713431)
chr3 (423-583)||(19014505-19014660)
chr3 (11-69)||(27259185-27259243)
chr3 (423-473)||(27541147-27541197)
chr3 (11-69)||(28703398-28703456)
chr3 (11-69)||(46518652-46518710)
chr3 (14-55)||(11642206-11642247)
chr3 (13-66)||(26481954-26482007)
chr3 (18-67)||(54990728-54990777)
chr3 (449-517)||(7741724-7741792)
chr3 (11-51)||(39253739-39253779)
chr3 (13-69)||(40063643-40063699)
chr3 (13-69)||(51903874-51903930)
chr3 (12-51)||(3427548-3427587)
chr3 (18-65)||(8075128-8075175)
chr3 (18-69)||(14339634-14339685)
chr3 (22-69)||(17554795-17554842)
chr3 (11-70)||(31788964-31789023)
chr3 (14-69)||(45308899-45308954)
chr3 (18-56)||(17765164-17765202)
chr3 (18-56)||(19066484-19066522)
chr3 (19-69)||(39976433-39976483)
chr3 (469-583)||(47000835-47000948)
chr3 (18-67)||(16900682-16900731)
chr3 (18-51)||(17108899-17108932)
chr3 (13-54)||(17554491-17554532)
chr3 (18-51)||(19716239-19716272)
chr3 (482-583)||(33290758-33290858)
chr3 (18-51)||(33899656-33899689)
chr3 (11-44)||(34622535-34622568)
chr3 (12-69)||(36720405-36720462)
chr3 (18-51)||(44069800-44069833)
chr3 (18-51)||(47454618-47454651)
chr3 (16-57)||(48583449-48583490)
chr3 (22-51)||(49452915-49452944)
chr3 (13-69)||(4844507-4844563)
chr3 (13-69)||(4870203-4870259)
chr3 (11-51)||(8796087-8796127)
chr3 (19-51)||(11612341-11612373)
chr3 (423-467)||(18257971-18258015)
chr3 (22-50)||(24353384-24353412)
chr3 (18-66)||(25035732-25035780)
chr3 (18-50)||(32320509-32320541)
chr3 (13-69)||(32638969-32639025)
chr3 (11-51)||(36010784-36010824)
chr3 (426-474)||(42417929-42417977)
[»] chr2 (77 HSPs)
chr2 (372-565)||(5163741-5163934)
chr2 (462-583)||(36186579-36186700)
chr2 (393-556)||(30257776-30257940)
chr2 (421-541)||(40876936-40877056)
chr2 (389-604)||(15925443-15925661)
chr2 (424-621)||(36506809-36507000)
chr2 (456-583)||(16646928-16647055)
chr2 (18-69)||(37480099-37480150)
chr2 (425-584)||(38561844-38562002)
chr2 (18-69)||(42327396-42327447)
chr2 (11-69)||(42922438-42922497)
chr2 (361-599)||(2886978-2887218)
chr2 (11-69)||(19244133-19244191)
chr2 (13-69)||(4262298-4262354)
chr2 (11-51)||(13803537-13803577)
chr2 (18-65)||(21195677-21195724)
chr2 (423-554)||(28556603-28556734)
chr2 (18-69)||(29503295-29503346)
chr2 (11-69)||(4060208-4060266)
chr2 (434-583)||(38134084-38134230)
chr2 (11-69)||(40416384-40416442)
chr2 (12-69)||(11062384-11062441)
chr2 (391-539)||(17271273-17271424)
chr2 (423-606)||(18197338-18197520)
chr2 (18-69)||(12086130-12086181)
chr2 (426-552)||(18829973-18830100)
chr2 (18-69)||(23052524-23052575)
chr2 (18-69)||(39715016-39715067)
chr2 (11-69)||(11251111-11251169)
chr2 (15-69)||(28846715-28846769)
chr2 (11-69)||(30410543-30410601)
chr2 (12-62)||(33582004-33582054)
chr2 (498-603)||(38608294-38608400)
chr2 (18-55)||(34041589-34041626)
chr2 (462-583)||(37912332-37912453)
chr2 (11-55)||(11738038-11738082)
chr2 (15-51)||(17737622-17737658)
chr2 (421-465)||(28226833-28226877)
chr2 (15-51)||(41908636-41908672)
chr2 (13-69)||(42602578-42602634)
chr2 (18-69)||(12994377-12994428)
chr2 (18-69)||(21213793-21213844)
chr2 (18-69)||(30808648-30808699)
chr2 (424-479)||(38035390-38035445)
chr2 (18-69)||(42420293-42420344)
chr2 (421-467)||(4206647-4206693)
chr2 (11-69)||(4226086-4226144)
chr2 (423-493)||(6621319-6621389)
chr2 (390-444)||(16647942-16647996)
chr2 (11-69)||(16918572-16918630)
chr2 (417-451)||(34345892-34345926)
chr2 (430-564)||(35280919-35281055)
chr2 (15-57)||(38854460-38854502)
chr2 (538-620)||(40705853-40705935)
chr2 (18-55)||(4438980-4439017)
chr2 (18-67)||(6099520-6099568)
chr2 (12-69)||(19322792-19322849)
chr2 (18-67)||(21939124-21939173)
chr2 (21-50)||(26276398-26276427)
chr2 (464-553)||(26350440-26350528)
chr2 (18-67)||(26482119-26482167)
chr2 (22-51)||(33839265-33839294)
chr2 (382-467)||(34909424-34909509)
chr2 (14-67)||(38856159-38856212)
chr2 (11-51)||(3001421-3001461)
chr2 (13-57)||(3661004-3661048)
chr2 (482-566)||(4206325-4206409)
chr2 (13-69)||(7799031-7799087)
chr2 (12-48)||(12497777-12497813)
chr2 (11-51)||(14500319-14500359)
chr2 (37-69)||(24191862-24191894)
chr2 (27-67)||(30359680-30359720)
chr2 (18-54)||(32687520-32687556)
chr2 (14-54)||(35203380-35203420)
chr2 (390-450)||(37911399-37911459)
chr2 (18-54)||(40791491-40791527)
chr2 (11-51)||(45026785-45026825)
[»] scaffold0777 (1 HSPs)
scaffold0777 (421-583)||(5844-6005)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-69)||(94965-95023)
[»] scaffold0531 (1 HSPs)
scaffold0531 (421-535)||(9699-9813)
[»] scaffold0180 (1 HSPs)
scaffold0180 (11-69)||(19956-20014)
[»] scaffold0258 (1 HSPs)
scaffold0258 (13-69)||(15319-15375)
[»] scaffold0299 (1 HSPs)
scaffold0299 (11-69)||(11552-11610)
[»] scaffold0126 (1 HSPs)
scaffold0126 (11-69)||(25341-25399)
[»] scaffold0527 (2 HSPs)
scaffold0527 (498-583)||(1720-1805)
scaffold0527 (498-583)||(9783-9868)
[»] scaffold0194 (1 HSPs)
scaffold0194 (13-69)||(13042-13098)
[»] scaffold0063 (1 HSPs)
scaffold0063 (11-69)||(35383-35441)
[»] scaffold0291 (1 HSPs)
scaffold0291 (18-51)||(2471-2504)
[»] scaffold0006 (3 HSPs)
scaffold0006 (11-68)||(18324-18381)
scaffold0006 (13-57)||(163005-163049)
scaffold0006 (18-66)||(222536-222584)
[»] scaffold0238 (1 HSPs)
scaffold0238 (11-51)||(2705-2745)
[»] scaffold0517 (1 HSPs)
scaffold0517 (18-69)||(7727-7778)
[»] scaffold0004 (1 HSPs)
scaffold0004 (18-69)||(81565-81616)
[»] scaffold0122 (1 HSPs)
scaffold0122 (19-69)||(6921-6971)
[»] scaffold0118 (1 HSPs)
scaffold0118 (11-69)||(41627-41685)
[»] scaffold1367 (1 HSPs)
scaffold1367 (12-69)||(835-892)
[»] scaffold1173 (1 HSPs)
scaffold1173 (498-582)||(403-487)
[»] scaffold0008 (1 HSPs)
scaffold0008 (13-69)||(49330-49386)


Alignment Details
Target: chr1 (Bit Score: 503; Significance: 0; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 503; E-Value: 0
Query Start/End: Original strand, 11 - 630
Target Start/End: Complemental strand, 3266006 - 3265386
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaataattcttgtaatgatctaatcttcactaagaggattacctat 110  Q
    |||||| |||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  3266006 cagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagtcaataattcttgtaatgatctaatcttcactaagaggattacatat 3265907  T
Q  111 gaggagcatctggtggatgtggtaaaattcttgctcttacgagtgggaggtggaacccgtcatgtgcaagggtagagttttggggtgttggcggagtcag 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||||| |    
T  3265906 gaggagcatctggtggatgtggtaaaatttttgctcttacgagtggggggtggaacccaccatgtgcaaaggtagagttttggggtgttggcggagtcgg 3265807  T
Q  211 gttgttgtgctttaggatgcttggtgggacgctttcgattatcctcttaggaatagttatgtgatgtcttctctctgttagccgacatggatgcatgttg 310  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3265806 gttgctgtgctttaggatgcttggtgggacgctttcgattctcctcttaggaatagttatgtgatgtcttctctctgttagccgacatggatgcatgttg 3265707  T
Q  311 gaatgttggagcaaggtgcacatgatctaattgatggttgtccaggctagagggtggctctgagggtaggcgggaggaacggcaacccagggcaccattt 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| | |||||||||||||    
T  3265706 gaatgttggagcaaggtgcacatgatctaattgatggttgtccaggccagagggtggccctgagggtaggcgggaggaactgcagcacagggcaccattt 3265607  T
Q  411 tataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttt 510  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  3265606 tataaagggaaccaaaattattatttttacttaatagttagtattaaatagatatatttctttttaactccctttga-taattcttatgaaaatatgttt 3265508  T
Q  511 taagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa--tagtacaactttattgattcgccta 608  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||||||| |||    
T  3265507 taagagaacttttattatcaatgaatcttttgcaacaaaaaatgcacgaagaaagacattcgaataattaaaatgtaatacaactttattgattcgtcta 3265408  T
Q  609 agacactaaaaattttaagacc 630  Q
    ||||||||||||| ||||||||    
T  3265407 agacactaaaaatcttaagacc 3265386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 421 - 605
Target Start/End: Complemental strand, 1153855 - 1153672
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||||  | |||||||||||||||||||||    
T  1153855 accacaattattatttttatttagtagttagtattaaatagttatatttgtttttaactcc-tttaattaattctattaaaaatatgttttaagagaact 1153757  T
Q  521 tttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgc 605  Q
    || ||| ||||| ||||||||| ||||||||| ||| ||||||| | ||||| ||||||||||  ||||||||||||||||||||    
T  1153756 ttgattttcaattaatcttttgcaacaaaaaacgcaagaagaaagatattcggataattaaaacggtacaactttattgattcgc 1153672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 361 - 604
Target Start/End: Original strand, 1240365 - 1240612
Alignment:
Q  361 agggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaata 460  Q
    |||||||| |||||||  ||  |||||  ||||| |||||| ||||||||| | | ||| || |||||||||||||||||||||||||||||| || |||    
T  1240365 agggtggccctgagggcgggatggaggggcggcagcccaggacaccatttttttaggggcactaaaattattatttttacttagtagttagtactatata 1240464  T
Q  461 gatatatttatttttaactccctttgattaattcttatgaaaatatgtttta----agagaacttttattatcaatgaatcttttgtaacaaaaaatgca 556  Q
     |||||||| |||||||  | ||||||||||||||  ||||||||| ||||     |||||||||  ||||| ||||||||||||| |||||||||||||    
T  1240465 aatatatttctttttaatccgctttgattaattctattgaaaatatatttttttttagagaacttcgattataaatgaatcttttgcaacaaaaaatgca 1240564  T
Q  557 cgaagaaaaacattcgaataattaaaatagtacaactttattgattcg 604  Q
     ||||||||| ||  | ||||||||||  | |||| ||||||| ||||    
T  1240565 agaagaaaaatatcaggataattaaaagggcacaattttattgtttcg 1240612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 362 - 577
Target Start/End: Complemental strand, 45385426 - 45385209
Alignment:
Q  362 gggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatag 461  Q
    ||||||| |||||||| ||||||||    |||| || ||| ||||||||||||| ||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  45385426 gggtggccctgagggtgggcgggagaggtggcagcctaggacaccattttataaggggtatcaaaattattatttttatttagtagtttgtattaaatgg 45385327  T
Q  462 atatatttatttttaactccctttgatt----aattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcac 557  Q
    |||||||| ||||||||||||||| |||    ||| ||  ||| |||||||||  ||||||| || ||| ||||||||||||||| |||||||||| ||     
T  45385326 atatatttctttttaactccctttaattaataaatactattgataatatgttt--agagaaccttgattttcaatgaatcttttgcaacaaaaaatacaa 45385229  T
Q  558 gaagaaaaacattcgaataa 577  Q
    || |||||| ||| ||||||    
T  45385228 gaggaaaaatatttgaataa 45385209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 421 - 539
Target Start/End: Complemental strand, 8246851 - 8246730
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaata---tgttttaagaga 517  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||| ||||||| |   |||||||||||||  ||||||||   | |||| | |||    
T  8246851 accaaaattattatttttacttaatagttagtactatatagatatatttctttttaatttgatttgattaattctattgaaaatatattttttttataga 8246752  T
Q  518 acttttattatcaatgaatctt 539  Q
    ||||| ||||| ||||||||||    
T  8246751 actttaattataaatgaatctt 8246730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 362 - 577
Target Start/End: Complemental strand, 23898085 - 23897875
Alignment:
Q  362 gggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatag 461  Q
    ||||||| |||||||| |||  ||||  ||||| ||||||| |||||||| | | ||| ||||||||||| |||||||||||||||||||||      |     
T  23898085 gggtggccctgagggtgggcttgaggggcggcagcccagggaaccatttttttaggggcaccaaaattatcatttttacttagtagttagta------at 23897992  T
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaac--aaaaaatgcacga 559  Q
    |||||||  ||||||| |  ||||||||||||| |||  ||| || |||| ||| |||||| ||||| ||||||| ||||| |||  |||||||||| ||    
T  23897991 atatattcctttttaatttgctttgattaattc-tatttaaaaatatttttagataactttgattataaatgaatattttgcaacaaaaaaaatgcaaga 23897893  T
Q  560 agaaaaacattcgaataa 577  Q
    ||||||| ||| ||||||    
T  23897892 agaaaaatatttgaataa 23897875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 4566630 - 4566572
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  4566630 cagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaata 4566572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 33700767 - 33700825
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  33700767 cagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaata 33700825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 36371552 - 36371494
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  36371552 cagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaata 36371494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 462 - 583
Target Start/End: Original strand, 35405375 - 35405496
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||||| ||||||| || |||||||||||| |  | |||| || |||| ||| |||||| ||||  ||||||| ||||| ||||||||||||| ||||    
T  35405375 atatatttctttttaattcgctttgattaattatatttaaaaaatatttttagataactttgattagaaatgaatattttgcaacaaaaaatgcaagaag 35405474  T
Q  562 aaaaacattcgaataattaaaa 583  Q
    ||||| ||| ||||||||||||    
T  35405475 aaaaatatttgaataattaaaa 35405496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 424 - 542
Target Start/End: Complemental strand, 33735878 - 33735760
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttt 523  Q
    |||||||||| |||||  ||||||||||||||  ||| |||||||| ||||||| |   ||||||||||| |  ||||||||| |||| ||| ||||||     
T  33735878 aaaattattaattttatctagtagttagtattgtataaatatatttctttttaatttggtttgattaattatattgaaaatatatttttagacaactttg 33735779  T
Q  524 attatcaatgaatcttttg 542  Q
    ||||| |||||||||||||    
T  33735778 attataaatgaatcttttg 33735760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 583
Target Start/End: Complemental strand, 35204344 - 35204188
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||||||||||||||||| ||||||||| ||| | ||||||   ||||| |  |||||||||||| |  ||| || || |||| |||||| |||    
T  35204344 caaaattattatttttacttagtaattagtattatataaaaatattt---tttaaattgctttgattaattatattgacaa-atatttttagagaatttt 35204249  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     ||||| ||||||| ||||| || ||||| | || ||| ||||||||| ||||||||||||    
T  35204248 gattatgaatgaatattttgcaataaaaagtacaagaaaaaaaacattggaataattaaaa 35204188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 512
Target Start/End: Complemental strand, 16141645 - 16141556
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgtttta 512  Q
    |||| |||||||| ||| |||||||||||||||| ||| | |||||| |||||||||  ||||||| |||||| |||||||||| |||||    
T  16141645 caaatttattattgttatttagtagttagtattatatataaatatttgtttttaactttctttgatcaattctaatgaaaatatatttta 16141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 27567117 - 27567174
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  27567117 agagaaaatcgaatctgagaccttgaagaggagcacactctcaggttccaagtcaata 27567174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 2220052 - 2219996
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  2220052 gagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaata 2219996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 15786321 - 15786372
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||||||||||||||| ||| | |||||||||||    
T  15786321 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaata 15786372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 630
Target Start/End: Complemental strand, 29062447 - 29062288
Alignment:
Q  471 tttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacatt 570  Q
    ||||||| || ||| |||||||||   | ||||||| || | |||||||||||||||| ||| ||||||||| |||||||||| || ||||||| | |||    
T  29062447 tttttaattcacttggattaattcaatttaaaatatattgttagagaacttttattataaataaatcttttgcaacaaaaaatacaagaagaaatatatt 29062348  T
Q  571 cgaataattaaaatagtacaactttattgattcgcctaagacactaaaaattttaagacc 630  Q
     || ||||||||| || |  | ||||||| ||||  ||| |||| |||||| ||||||||    
T  29062347 ggagtaattaaaagagcattattttattgtttcgtttaaaacaccaaaaatcttaagacc 29062288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 8177176 - 8177234
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||| ||||||||||||||||||||| ||| | |||||||||||    
T  8177176 cagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaata 8177234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 9165189 - 9165247
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||| ||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  9165189 cagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaata 9165247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 10526905 - 10526847
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||| ||||||||||||||||||||| |||| ||||| |||||||||||    
T  10526905 cagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaata 10526847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 17745250 - 17745308
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||| |||||||| |||||||||||||| ||||||| |||||||||||    
T  17745250 cagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaata 17745308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 51703861 - 51703803
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||| || |||||||||||||||||| ||| |||||||||||||    
T  51703861 cagagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaata 51703803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 51814574 - 51814532
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcag 55  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  51814574 gagagaatcgaacctgagaccttgaggaggagcacactctcag 51814532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 52336768 - 52336826
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||| | |||||||||||    
T  52336768 cagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaata 52336826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 11063637 - 11063580
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| |||||||||| ||||||||||||||| |||||| |||||| |||||||||||    
T  11063637 agagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaata 11063580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 583
Target Start/End: Complemental strand, 22667261 - 22667164
Alignment:
Q  486 gattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    ||||||||||  ||||||| | ||||  || |||||| ||||| ||||||| ||||| || |||||||||| ||||||||| ||| ||||||||||||    
T  22667261 gattaattctattgaaaatttatttttggataactttgattataaatgaatattttgcaataaaaaatgcaagaagaaaaatatttgaataattaaaa 22667164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 424 - 493
Target Start/End: Original strand, 29664192 - 29664261
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaatt 493  Q
    ||||||||||||||||||||||| |||||| || |||| ||||||| ||||||| ||  |||||||||||    
T  29664192 aaaattattatttttacttagtaattagtactatataggtatatttctttttaattcgttttgattaatt 29664261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 583
Target Start/End: Complemental strand, 49762520 - 49762420
Alignment:
Q  482 ctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaa 581  Q
    ||||||||||||||  ||||||||| |||| |||||||||| ||||| ||||| | || |||||||||||||  | |||| |||| ||| ||||||||||    
T  49762520 ctttgattaattctattgaaaatatatttttagagaactttgattataaatgagttttgtgtaacaaaaaatataagaag-aaaatattagaataattaa 49762422  T
Q  582 aa 583  Q
    ||    
T  49762421 aa 49762420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 2799944 - 2799904
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  2799944 cagagagaatcgaacctgagaccttgaggaggagcacactc 2799904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 1247195 - 1247148
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggtt 58  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  1247195 cagagagaatcgaacctgagaccttgaggaggagtacactcccaggtt 1247148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 6122869 - 6122822
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    |||||||||||||||||||||||||||||||||| || || |||||||    
T  6122869 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc 6122822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 19528328 - 19528379
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||||||||||||||||  || | |||||||||||    
T  19528328 aatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaata 19528379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 50920036 - 50919978
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||| ||||| |||| ||||||||||||||||| |||| |||||    
T  50920036 cagagagaatcgaacctgaaaccttaaggatgagcacactctcaggtttcaagtcaata 50919978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 21392911 - 21392878
Alignment:
Q  19 atcgaacctgagaccttgaggaggagcacactct 52  Q
    ||||||||||||||||||||||||||||||||||    
T  21392911 atcgaacctgagaccttgaggaggagcacactct 21392878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 38947473 - 38947506
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||||||||||||||||||    
T  38947473 aatcgaacctgagaccttgaggaggagcacactc 38947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 8904496 - 8904456
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  8904496 cagagagaatcgaacttgagaccttgaggaggagcacactc 8904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 12587350 - 12587294
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||| |||||||||||||||| ||| | ||||| |||||    
T  12587350 gagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 30717893 - 30717941
Alignment:
Q  426 aattattatttttacttagtagttagtattaaatagatatatttatttt 474  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||| ||||    
T  30717893 aattattatttttacttagtaattaatattatatagatatatttttttt 30717941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 446
Target Start/End: Original strand, 35405291 - 35405346
Alignment:
Q  390 cggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagta 446  Q
    ||||| |||||||||||||||| ||  ||| ||||||||||||||||||||||||||    
T  35405291 cggcagcccagggcaccattttttag-gggcaccaaaattattatttttacttagta 35405346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 44961846 - 44961806
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactct 52  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  44961846 agagagaatcgaacctgagaccctgaggaggagcacactct 44961806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 450
Target Start/End: Complemental strand, 40916 - 40869
Alignment:
Q  403 caccattttataaagggaaccaaaattattatttttacttagtagtta 450  Q
    ||||||||||| | ||| |||||||||||||||||||||| |||||||    
T  40916 caccattttattaggggcaccaaaattattatttttactttgtagtta 40869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 15065036 - 15065001
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggt 57  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15065036 gaacctgagaccttgaggatgagcacactctcaggt 15065001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 16169979 - 16170030
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||| ||||||||||||| ||||||| ||||| ||||| |||||    
T  16169979 aatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaata 16170030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 453
Target Start/End: Original strand, 23935155 - 23935218
Alignment:
Q  390 cggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagta 453  Q
    ||||| |||||||||||||||| | | ||  ||||||||||  |||||||||||||||||||||    
T  23935155 cggcagcccagggcaccatttttttagggtcaccaaaattaacatttttacttagtagttagta 23935218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 31383799 - 31383850
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||   ||||||||||||||| ||||| |||||||||||    
T  31383799 aatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaata 31383850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 37400349 - 37400298
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||| ||||||||| |||||||||||||| ||||||  ||||||||||    
T  37400349 aatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaata 37400298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 52116786 - 52116833
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||| |||||||||||||||||| || || |||||||||||    
T  52116786 gaacctgagacattgaggaggagcacactcccaagtcccaagccaata 52116833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 6650677 - 6650619
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||| ||||||||||||| |||| | | | |||||||||||    
T  6650677 cagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaata 6650619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 12662363 - 12662325
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacact 50  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  12662363 agagataatcgaacctgagacatcgaggaggagcacact 12662325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 21547474 - 21547532
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||| |||| |||||||||||| ||| || || |||||||||||    
T  21547474 cagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaata 21547532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 4825046 - 4824997
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||| ||||||||||||||| |||||||||||||  |||| |||||||||    
T  4825046 aatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaa 4824997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 9879519 - 9879462
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||| |||||||||  |||| ||| |||||||||| | |||||||||||    
T  9879519 agagataatcgaatctgagacctcaaggaagagtacactctcagatcccaagccaata 9879462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 14787331 - 14787376
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggt 57  Q
    ||||| |||||||||||| ||||||||||| | |||||||||||||    
T  14787331 agagagaatcgaacctgacaccttgaggagaaacacactctcaggt 14787376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 21184391 - 21184440
Alignment:
Q  20 tcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||| || |||||||||||| ||||| |||||||||||    
T  21184391 tcgaacttgagaccttcagaaggagcacactcgcaggtcccaagccaata 21184440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 31605849 - 31605898
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||| ||||||||||||||||||||||||   |||| |||||||||    
T  31605849 aatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaa 31605898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 603
Target Start/End: Original strand, 36382974 - 36383059
Alignment:
Q  519 cttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaata-gtacaactttattgattc 603  Q
    |||| ||||| ||||||| |||   ||||||||||| | |||||||||||||| ||||||||||| | | ||||||||||| ||||    
T  36382974 ctttgattatgaatgaatatttcacaacaaaaaatgtatgaagaaaaacattcaaataattaaaaaaggcacaactttattaattc 36383059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 43446038 - 43446005
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||||| |||||||||||||||||||||||||    
T  43446038 aatcgaacatgagaccttgaggaggagcacactc 43446005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 45266909 - 45266876
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||||||||||||| ||||    
T  45266909 aatcgaacctgagaccttgaggaggagcaaactc 45266876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 51281431 - 51281394
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacact 50  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  51281431 gagagaatcaaacctgagaccttgaggaggagcacact 51281394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 52029938 - 52029971
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  52029938 aatcgaacctgagaccttgagaaggagcacactc 52029971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 1094605 - 1094549
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||  |||||||| | |||||||||||||| ||||||||||| |||||    
T  1094605 gagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaata 1094549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 7219919 - 7219955
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctca 54  Q
    ||||||||||||||| | |||||||||||||||||||    
T  7219919 aatcgaacctgagacttcgaggaggagcacactctca 7219955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 9643805 - 9643861
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||| ||| ||||||||||||||| || ||||||| ||| | |||||||||||    
T  9643805 gagataattgaatctgagaccttgaggatgaacacactcccagatcccaagccaata 9643861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 24019098 - 24019066
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacact 50  Q
    |||||||||| ||||||||||||||||||||||    
T  24019098 aatcgaacctaagaccttgaggaggagcacact 24019066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 29056460 - 29056404
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    ||||||||||||||||||| | ||| |||| |||||||||| ||||| |||| ||||    
T  29056460 cagagataatcgaacctgaaaacttcaggatgagcacactcccaggtcccaaaccaa 29056404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 598
Target Start/End: Original strand, 30718216 - 30718256
Alignment:
Q  558 gaagaaaaacattcgaataattaaaatagtacaactttatt 598  Q
    ||||||| |||||| |||||||||||| |||||||||||||    
T  30718216 gaagaaagacattcaaataattaaaattgtacaactttatt 30718256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 31794276 - 31794316
Alignment:
Q  29 agaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||||| || || |||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaata 31794316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 35562789 - 35562749
Alignment:
Q  29 agaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||| |||||||| |||||||||||    
T  35562789 agacctcgaggaggagcacattctcaggtcccaagccaata 35562749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 40810549 - 40810509
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||||||||||||||||||| ||||| |||||||    
T  40810549 cagagagaatcgaacctgagaccttgaagaggaacacactc 40810509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 48391333 - 48391381
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcca 66  Q
    ||||||| |||| ||||||| |||||||| ||||||| |||||||||||    
T  48391333 aatcgaatctgaaaccttgatgaggagcaaactctcaagttccaagcca 48391381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 6e-42; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 362 - 621
Target Start/End: Original strand, 12174259 - 12174518
Alignment:
Q  362 gggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatag 461  Q
    ||||||| ||||||| |||| |||||  | | |||| ||||||||||||| |||  || ||||||||||||||||||||||||||||||||| || ||||    
T  12174259 gggtggccctgagggcaggcaggaggggcagtaacctagggcaccattttttaagaggcaccaaaattattatttttacttagtagttagtactatatag 12174358  T
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||||| ||||||| ||  ||||||||||| |  | ||||||| |||| |||||||||| ||| | |||||||||||||||||||||| |||| ||||    
T  12174359 atatatttctttttaattcgttttgattaattatattaaaaatatatttttagagaactttaattgtaaatgaatcttttgtaacaaaaactgcaagaag 12174458  T
Q  562 aaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaat 621  Q
     |||| |||  ||||| ||||| |  |||| ||||||| |||| | | ||||| ||||||    
T  12174459 gaaaatattgaaataaataaaacaacacaattttattgtttcgtccatgacaccaaaaat 12174518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 421 - 606
Target Start/End: Complemental strand, 9815803 - 9815619
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    |||||||||||||||||||||||||||||| || || |||||||||||| ||||||| || |||||||||| | |  ||||||||| |||| ||| ||||    
T  9815803 accaaaattattatttttacttagtagttaatactatatagatatatttctttttaattcgctttgattaactttattgaaaatatatttttagaaaact 9815704  T
Q  521 tttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcc 606  Q
     | ||||| ||||| | ||||||||||||||||||| |||||| || ||| ||||||||||||  | |||| ||||||| ||||||    
T  9815703 atgattataaatgagt-ttttgtaacaaaaaatgcaagaagaataatattagaataattaaaagggcacaattttattgtttcgcc 9815619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 423 - 604
Target Start/End: Original strand, 31787815 - 31787993
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| || ||||||||||||||  ||||||||| |||  ||| ||||||    
T  31787815 caaaattattatttgtacttaatagttagtattaagtagatatatttatttttaattcgctttgattaattctattgaaaatatatttgtagataacttt 31787914  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcg 604  Q
     ||||| ||||||| ||||| ||| ||||||||| ||  ||||| |||  |||||||||||  |||||| ||||||| ||||    
T  31787915 aattataaatgaatattttgcaactaaaaatgcaaga--aaaaatattgaaataattaaaaaggtacaa-tttattgtttcg 31787993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 583
Target Start/End: Complemental strand, 10669059 - 10668850
Alignment:
Q  371 tgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatattta 470  Q
    ||||||| |||||||||  | |||  ||||||||||||||| | | ||| ||||||||||||||||||||||| |||||||||||| |||||||||| |     
T  10669059 tgagggtgggcgggaggggcagcagtccagggcaccatttttttaggggcaccaaaattattatttttacttattagttagtattatatagatatatatc 10668960  T
Q  471 tttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacatt 570  Q
    |||| || | | ||||||||||| |  ||||||||| |||| ||| ||| || ||||| ||||||||| |||  ||||||||| ||  |||||||| |||    
T  10668959 ttttgaa-ttcatttgattaattatattgaaaatat-tttttaga-aacgttgattataaatgaatctattgagacaaaaaatccaaaaagaaaaatatt 10668863  T
Q  571 cgaataattaaaa 583  Q
     ||||||||||||    
T  10668862 agaataattaaaa 10668850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 401 - 583
Target Start/End: Complemental strand, 35122102 - 35121917
Alignment:
Q  401 ggcaccattttataaagggaaccaaaattattatttttacttagtagttag---tat-taaatagatatatttatttttaactccctttgattaattctt 496  Q
    |||||||||| || | ||| ||||||||||||||||||||||||||||||    ||| || ||| |||||| ||| ||||| || ||||||||||||||     
T  35122102 ggcaccatttaattaggggcaccaaaattattatttttacttagtagttatatatatatatatatatatatatatatttaattcgctttgattaattcta 35122003  T
Q  497 atgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     ||||||||| |||| ||| |||||| ||||| ||||||| ||||| ||| ||||||||  ||||||||| ||| ||||||||||||    
T  35122002 ttgaaaatatatttttagataactttgattataaatgaatattttgcaac-aaaaatgctagaagaaaaatatttgaataattaaaa 35121917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 416 - 630
Target Start/End: Complemental strand, 34573324 - 34573110
Alignment:
Q  416 agggaaccaaaattattatttttacttagtagttagtattaaatag--atatatttatttttaactccctttgattaattcttatgaaaatatgttttaa 513  Q
    |||| ||||||||||||||||||| |||||||||| ||||| ||||  |||||||| ||||||| ||  ||||||||||| |  ||||||||| |||| |    
T  34573324 agggtaccaaaattattatttttatttagtagttaatattatatagatatatatttctttttaattcggtttgattaattttattgaaaatatattttta 34573225  T
Q  514 gagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagaca 613  Q
     |||||||| ||||| |||||||||||  ||| ||| ||||||  |||||||| ||| ||||| || |||  | |||| ||||||| || | ||| ||||    
T  34573224 aagaactttgattataaatgaatcttt--taaaaaagaatgcaaaaagaaaaatatttgaatattttaaagggcacaattttattgttttgtctaggaca 34573127  T
Q  614 ctaaaaattttaagacc 630  Q
      |||||| ||||||||    
T  34573126 tcaaaaatcttaagacc 34573110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 424 - 583
Target Start/End: Complemental strand, 34540988 - 34540829
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttt 523  Q
    ||||||||||||||||||||||| ||| || || |||||||||||| || |||||||  |||||||| ||||  ||||||||| |||| | | ||  ||     
T  34540988 aaaattattatttttacttagtaattaatactatatagatatatttcttattaactcgttttgattagttctattgaaaatatatttttaaataatcttg 34540889  T
Q  524 attatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    ||||| ||| ||| ||||| |||||||||| || ||||||| |||||| ||| |||||||    
T  34540888 attatgaataaattttttgcaacaaaaaatacatgaagaaatacattcaaatgattaaaa 34540829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 482 - 583
Target Start/End: Original strand, 33344880 - 33344981
Alignment:
Q  482 ctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaa 581  Q
    ||||||||||||||  ||||||||| |||| ||| |||||| ||||| ||||||| ||||| ||||||||||||  ||||||||| ||| ||||||||||    
T  33344880 ctttgattaattctattgaaaatatatttttagataactttgattataaatgaatattttgcaacaaaaaatgctagaagaaaaatatttgaataattaa 33344979  T
Q  582 aa 583  Q
    ||    
T  33344980 aa 33344981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 482 - 583
Target Start/End: Complemental strand, 34329893 - 34329792
Alignment:
Q  482 ctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaa 581  Q
    ||||||||||||||  ||||||||| |||| ||||||||||  |||| |||  |||||||| ||||||||||||| ||||||||| ||| ||||||||||    
T  34329893 ctttgattaattctattgaaaatatatttttagagaactttgcttataaatagatcttttgcaacaaaaaatgcaagaagaaaaatattagaataattaa 34329794  T
Q  582 aa 583  Q
    ||    
T  34329793 aa 34329792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 444 - 583
Target Start/End: Complemental strand, 31153745 - 31153606
Alignment:
Q  444 gtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgt 543  Q
    ||||| |||| || ||||||||||||| |||||| ||| ||| ||||||| |  |||||||||||||| | | |||||| || || |||||||||||||     
T  31153745 gtagtcagtactatatagatatatttaattttaaatccttttaattaattatattgaaaatatgtttttaaataactttgatcatgaatgaatcttttgc 31153646  T
Q  544 aacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    || |||||||||| ||  ||||||| || |||||||||||    
T  31153645 aataaaaaatgcaagagaaaaaacactcaaataattaaaa 31153606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 603
Target Start/End: Complemental strand, 33607192 - 33607007
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    ||||||||||||||||||| ||| |||||| || || ||| |||  |||||||| |||||  |||||||||||||  ||||||||| |||||| | | ||    
T  33607192 accaaaattattatttttatttaatagttaatagtatatacataattttattttcaactcattttgattaattctattgaaaatattttttaaaaaacct 33607093  T
Q  521 t--tta-ttatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattc 603  Q
    |  ||| |||| |||||| |||||| ||| ||| ||  ||||||||||| ||| |||||||||||| || |||| ||||| |||||    
T  33607092 taattagttatgaatgaaccttttgcaactaaagatatacgaagaaaaatatttgaataattaaaagagaacaagtttatcgattc 33607007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 477
Target Start/End: Original strand, 34969375 - 34969450
Alignment:
Q  402 gcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaa 477  Q
    |||| ||||| | ||||| | ||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  34969375 gcactatttttttaagggcatcaaaattattatttttacttagtagttggtactatatagatatatttatttttaa 34969450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 33549184 - 33549128
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaata 33549128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 10338175 - 10338226
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||||||||    
T  10338175 aatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaata 10338226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 461
Target Start/End: Complemental strand, 6549847 - 6549785
Alignment:
Q  399 agggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatag 461  Q
    ||||||||||||||||| ||| ||||| ||||||||||||| ||| ||||| |||||||||||    
T  6549847 agggcaccattttataatgggcaccaagattattatttttatttaatagtttgtattaaatag 6549785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 28364019 - 28363961
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| | |||| ||||||    
T  28364019 cagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaata 28363961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 12188298 - 12188355
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| |||||||| ||| ||||||||||||||||||||| ||||| |||||||||||    
T  12188298 agagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaata 12188355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 4105133 - 4105073
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaataat 71  Q
    |||||| |||||||||||||| ||| |||||||||||||||  ||||| ||||||||||||    
T  4105133 cagagaaaatcgaacctgagatcttaaggaggagcacactcctaggtttcaagccaataat 4105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 6274062 - 6274014
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatattt 469  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  6274062 accaaaattattattttaacttagtagttagtattatatacatatattt 6274014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 450
Target Start/End: Original strand, 33344763 - 33344823
Alignment:
Q  390 cggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagtta 450  Q
    ||||| |||| |||||||||| || | ||| ||||||||||||||||||||||||||||||    
T  33344763 cggcagcccaaggcaccatttaattaggggcaccaaaattattatttttacttagtagtta 33344823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 23910114 - 23910157
Alignment:
Q  20 tcgaacctgagaccttgaggaggagcacactctcaggttccaag 63  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  23910114 tcgaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 34444878 - 34444827
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||| |||||    
T  34444878 aatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaata 34444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 20213116 - 20213070
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagc 64  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  20213116 aatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 20213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 22107139 - 22107093
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagc 64  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  22107139 aatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 22107093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 31622997 - 31623043
Alignment:
Q  23 aacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||| |||||||||||||||| ||||| |||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaata 31623043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 467
Target Start/End: Complemental strand, 4338044 - 4337976
Alignment:
Q  399 agggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatat 467  Q
    ||||||||||| | | | ||| ||||||||||||| ||||||||||||||||||| || ||| ||||||    
T  4338044 agggcaccattattttatgggcaccaaaattattacttttacttagtagttagtactatatatatatat 4337976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 6385942 - 6385886
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||||||||||||| |||||||||||| || ||||| ||||| |||||    
T  6385942 gagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaata 6385886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 628
Target Start/End: Original strand, 35067103 - 35067207
Alignment:
Q  524 attatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaattt 623  Q
    ||||| |||||||||| || || |||||||| | ||| ||| | |||| |||||||||||||  | || |||||||||||||| ||||| | |||||| |    
T  35067103 attatgaatgaatcttatgcaagaaaaaatgtaagaaaaaagatattcaaataattaaaataacataattttattgattcgccaaagacgccaaaaatct 35067202  T
Q  624 taaga 628  Q
    |||||    
T  35067203 taaga 35067207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 19638005 - 19638056
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||  ||||||||||| ||||||||| |||||||    
T  19638005 aatcaaacctgagaccttgagctggagcacactcccaggttccacgccaata 19638056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 31847086 - 31847137
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||  ||||||||||||||| | |||||||| ||||||||||||||||    
T  31847086 aatcgaatttgagaccttgaggagtaacacactctaaggttccaagccaata 31847137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 448
Target Start/End: Original strand, 13229274 - 13229332
Alignment:
Q  390 cggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagt 448  Q
    ||||| |||| ||||||||||| | |  || ||||||||||||||||||||||||||||    
T  13229274 cggcagcccaaggcaccatttttttagaggcaccaaaattattatttttacttagtagt 13229332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 13574094 - 13574045
Alignment:
Q  20 tcgaacctgagaccttgaggaggagcacactctcaggttccaagccaataa 70  Q
    ||||||||||||||||||| |||| |||||||| || ||||||||||||||    
T  13574094 tcgaacctgagaccttgag-aggaacacactctaagattccaagccaataa 13574045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 13576633 - 13576584
Alignment:
Q  20 tcgaacctgagaccttgaggaggagcacactctcaggttccaagccaataa 70  Q
    ||||||||||||||||||| |||| |||||||| || ||||||||||||||    
T  13576633 tcgaacctgagaccttgag-aggaacacactctaagattccaagccaataa 13576584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 14278105 - 14278163
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||| ||||||||||||| ||||||||| ||||| ||||| | |||||||||    
T  14278105 cagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaata 14278163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 17328258 - 17328304
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggt 57  Q
    |||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  17328258 cagagagaatcgaacctgaaaccttgaagaggagcatactctcaggt 17328304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 518 - 584
Target Start/End: Complemental strand, 18991808 - 18991742
Alignment:
Q  518 acttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaat 584  Q
    ||||| ||||| |||||||||| || ||||||||||||| ||||||||| |||  |||| |||||||    
T  18991808 actttaattataaatgaatcttgtgcaacaaaaaatgcaagaagaaaaatattgaaatagttaaaat 18991742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 27989651 - 27989709
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||| ||||| || ||||||| |||| || ||||||||| ||||    
T  27989651 cagagataatcgaacctgaaaccttaagaaggagcatactcccaagttccaagctaata 27989709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 28841494 - 28841456
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  28841494 gagagaatcgaacttgagaccttgaggaggagcacactc 28841456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 14199948 - 14199981
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||| ||||||||||||||||||||||||||    
T  14199948 aatcgaatctgagaccttgaggaggagcacactc 14199981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 14558037 - 14557988
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    ||||||||||||||||  |||||||||||||||  ||||| |||||||||    
T  14558037 aatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaa 14557988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 20744505 - 20744542
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacact 50  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  20744505 gagataatcgaacatgagaccttgaggaggaacacact 20744542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 34969848 - 34969920
Alignment:
Q  503 atatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaata 576  Q
    |||| |||||||| |||||| | ||| ||||||||||||  ||||||||||||| ||||||||| ||| |||||    
T  34969848 atattttttaaga-aactttgactataaatgaatcttttacaacaaaaaatgcaagaagaaaaatattggaata 34969920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 12234503 - 12234559
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||| |||  ||||||||||| ||||| ||||| |||||    
T  12234503 gagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaata 12234559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 15951296 - 15951336
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| ||| |||| |||||||||||||||||||||||||    
T  15951296 cagagagaattgaacatgagaccttgaggaggagcacactc 15951336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 490
Target Start/End: Complemental strand, 33871164 - 33871074
Alignment:
Q  396 cccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgatta 490  Q
    |||| |||||| ||| ||||  || |||||||||||||||||||||   ||||||||| || ||| |||||||| || ||||||| |||||||||    
T  33871164 cccatggcaccttttcataagaggcaccaaaattattatttttact---tagttagta-tacatacatatatttcttcttaactcgctttgatta 33871074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 3193678 - 3193491
Alignment:
Q  396 cccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattct 495  Q
    ||||||||||||||||   ||||| |||||||||||||||||||  |||||| ||||| || |||||||||||| ||||||| |  |||||| ||||| |    
T  3193678 cccagggcaccattttcataagggcaccaaaattattatttttatgtagtaggtagtactacatagatatatttctttttaaattgctttgaataattat 3193579  T
Q  496 tatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
      |||||||||||||| | |||||||| ||||| ||||||||||||| || |||||||||| ||||||| |||||| |||||||||||    
T  3193578 attgaaaatatgtttttaaagaactttgattatgaatgaatcttttgcaataaaaaatgcaagaagaaagacattcaaataattaaaa 3193491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 423 - 583
Target Start/End: Complemental strand, 32257814 - 32257654
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||| ||||||| |  |||||||||||| |  |||||||||  ||| ||||||||||    
T  32257814 caaaataattatttttacttagtagttagtattacatagatatatttttttttaatttgctttgattaattttattgaaaatatacttttagagaacttt 32257715  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     ||||| ||||||| || |||||||||||||||| ||| ||||| ||| ||||||||||||    
T  32257714 gattataaatgaattttgtgtaacaaaaaatgcaagaacaaaaaaattggaataattaaaa 32257654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 423 - 552
Target Start/End: Original strand, 502805 - 502931
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||  |||||||||||||  ||||||||| |||| ||||||||||    
T  502805 caaaattattatttttacttag-agttagtattatatagatatatttctttttaactc--tttgattaattctattgaaaatatatttttagagaacttt 502901  T
Q  523 tattatcaatgaatcttttgtaacaaaaaa 552  Q
     ||||| ||||||||||||| || ||||||    
T  502902 gattatgaatgaatcttttgcaaaaaaaaa 502931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 16569429 - 16569252
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    ||||||||||||||||||||||||| || ||||| |||| ||||||| |||||||||||| ||  ||||||||  |||||||||||||| ||| ||| ||    
T  16569429 caaaattattatttttacttagtaggtaatattatataggtatatttctttttaactcccatttgttaattctattgaaaatatgtttttagaaaacctt 16569330  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgatt 602  Q
     | ||| ||| ||||| ||| |  |||||||||| ||||||| |||||  ||||||| |||  |||||||||||||||||    
T  16569329 gaatataaataaatctattgca--aaaaaatgcaagaagaaagacattgcaataatttaaacggtacaactttattgatt 16569252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 399 - 622
Target Start/End: Original strand, 20870610 - 20870827
Alignment:
Q  399 agggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttat 498  Q
    ||||||||||||| | ||| | | ||||||||||||||||| ||||||||||||    | || |||||||| ||||||| ||||||||||||||| |  |    
T  20870610 agggcaccatttttttaagagtatcaaaattattatttttatttagtagttagt----actatatatatttctttttaattccctttgattaattttatt 20870705  T
Q  499 gaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttatt 598  Q
    || ||||| |||| ||| |||||| ||||| ||||||| || || ||||||||||||| ||| ||||| |||  |||||||||||| |||||| ||||||    
T  20870706 gataatatatttttagataactttgattataaatgaatattctgcaacaaaaaatgcaagaa-aaaaatattaaaataattaaaatggtacaa-tttatt 20870803  T
Q  599 gattcgcctaagacactaaaaatt 622  Q
    | |||| | | | |||||||||||    
T  20870804 gtttcgtccagggcactaaaaatt 20870827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 556
Target Start/End: Complemental strand, 12263799 - 12263642
Alignment:
Q  401 ggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagata--tatttatttttaactccctttgattaattcttat 498  Q
    ||||||||||| | | ||| ||||||||||||||||||||||| | ||||||| || |||||||  | ||| ||||||| || ||||||||||||||  |    
T  12263799 ggcaccatttttttaggggcaccaaaattattatttttacttaatggttagtactatatagatatttttttttttttaattcgctttgattaattctatt 12263700  T
Q  499 gaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgca 556  Q
    |||||||| |||| | |||||||| |||||  |||||||||||| || |||| |||||    
T  12263699 gaaaatatatttttaaagaactttgattatagatgaatcttttgcaataaaagatgca 12263642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 423 - 556
Target Start/End: Complemental strand, 16570625 - 16570492
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    ||||||||||||||||||||| ||||| |||  | |||||||||||| ||||||| || ||||||||||||||  | ||||||| |||| ||||||||||    
T  16570625 caaaattattatttttacttattagttggtaccatatagatatatttctttttaattcactttgattaattctattaaaaatatatttttagagaacttt 16570526  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgca 556  Q
     ||||  ||| |||||||||  ||| ||||||||    
T  16570525 gattaaaaattaatcttttgccacagaaaatgca 16570492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 14285243 - 14285186
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaat 68  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14285243 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaat 14285186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 25627139 - 25627081
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  25627139 cagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaata 25627081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 34984888 - 34984830
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  34984888 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaata 34984830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 376 - 553
Target Start/End: Original strand, 36160997 - 36161170
Alignment:
Q  376 gtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttattttt 475  Q
    ||||||||||||| ||||||| |||  || ||||||   | ||| | |||||||||||||||||  ||||||||| ||||| |||||||| |||   |||    
T  36160997 gtaggcgggaggagcggcaactcagaacatcatttttataggggtatcaaaattattatttttatgtagtagttaatattatatagatattttt---ttt 36161093  T
Q  476 aactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaat 553  Q
    || |   ||||||||||| |  |||||||||||||||| | |||||| || || |||||||||||||||| |||||||    
T  36161094 aaattattttgattaattatattgaaaatatgttttaaaa-aactttgatcatgaatgaatcttttgtaataaaaaat 36161170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 391 - 475
Target Start/End: Complemental strand, 7887348 - 7887264
Alignment:
Q  391 ggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttattttt 475  Q
    |||| ||||||||||||||   | | ||| ||||||||||||||||||||||||||||||||| || |||||||| ||| |||||    
T  7887348 ggcagcccagggcaccattggtttaggggcaccaaaattattatttttacttagtagttagtactatatagatatgtttcttttt 7887264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 630
Target Start/End: Original strand, 39542410 - 39542615
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||||||||||| |||||||||||| || ||  |||||| | |||||||  |   || ||| ||| |  |||||||||||||| | ||||||||    
T  39542410 caaaattattatttttacgtagtagttagtactatatgaatatatat-tttttaaagcgtgtttattgattatattgaaaatatgtttttaaagaacttt 39542508  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaatt 622  Q
     ||||| ||| || |||||  || |||||||||| ||||||| ||||||  ||||||||||  | |||| |||||| |||||| || | ||| ||||||     
T  39542509 gattatgaat-aaacttttacaataaaaaatgcaagaagaaagacattcatataattaaaagggcacaattttattaattcgcatagggcaccaaaaata 39542607  T
Q  623 ttaagacc 630  Q
    ||||||||    
T  39542608 ttaagacc 39542615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 7918463 - 7918521
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||| ||||||||||||||||  ||||| |||||||||||||||||    
T  7918463 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaata 7918521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 16773889 - 16773831
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||| |||||||||||||||| ||||| ||||| |||||    
T  16773889 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaata 16773831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 25979251 - 25979194
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||  |||||||||||||    
T  25979251 agagagaatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaata 25979194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 606
Target Start/End: Complemental strand, 7886702 - 7886560
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||| ||| ||||||| || ||||||||||||||  ||||||||| | || ||| |||||| ||||| | ||||| ||||| ||||||||| | | ||||    
T  7886702 atatgtttctttttaattcgctttgattaattctattgaaaatatatgtttagataactttgattataagtgaatattttggaacaaaaaa-gtaagaag 7886604  T
Q  562 aaaaacattcgaataattaaaatagtacaactttattgattcgcc 606  Q
    |||||  || ||||||||||||| | |||| ||||||| ||||||    
T  7886603 aaaaatgtttgaataattaaaatggcacaa-tttattgtttcgcc 7886560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 603
Target Start/End: Original strand, 8934060 - 8934240
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttt 523  Q
    ||||||||||||| || ||| |||||||| | | ||| |||||||| ||||||||||  ||||||||||| |  |||| |||| |||| |||||   ||     
T  8934060 aaaattattatttatatttaatagttagtgt-acatatatatattt-tttttaactcattttgattaattatattgaagatatatttttagagagtctta 8934157  T
Q  524 attatcaatgaatcttttgtaacaaa---aaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattc 603  Q
    ||||| |||||||| |||||||||||   ||||| | ||||||||| |||  ||||||||||||  || | ||||||||||||    
T  8934158 attatgaatgaatcatttgtaacaaaaagaaatgtaagaagaaaaatatttaaataattaaaatgatatatctttattgattc 8934240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 43442278 - 43442238
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  43442278 cagagagaatcgaacctgagaccttgaggaggagcacactc 43442238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 87424 - 87475
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  87424 aatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaata 87475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 892479 - 892526
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  892479 gaacctgagaccttgaggaggagtacactctgaggtcccaagccaata 892526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 30883203 - 30883250
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  30883203 gaacttgagaccttgaggaggagcacactcccaggtcccaagccaata 30883250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 553
Target Start/End: Complemental strand, 3597041 - 3596911
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    ||||||||||||||||| |||||| |||||||||    ||||||||| ||||||| ||  |||||||||||||  | ||||||| |||| | | || |||    
T  3597041 caaaattattatttttatttagtaattagtattattgtgatatatttctttttaattcgttttgattaattctattaaaaatatatttttataaaaattt 3596942  T
Q  523 tattatcaatgaatcttttgtaacaaaaaat 553  Q
     | ||| | ||||||||||| || |||||||    
T  3596941 gaatataagtgaatcttttgaaaaaaaaaat 3596911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 18595995 - 18596053
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||| |||||||||||||||||||| || |||||  ||||||||||    
T  18595995 cagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaata 18596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 21549132 - 21549189
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| |||||||| |||||| || ||||||||||||||| ||||| |||||||||||    
T  21549132 agagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaata 21549189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 84899 - 84851
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcca 66  Q
    |||||||| ||||||||||||||||||||||||| ||| | ||||||||    
T  84899 aatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 29173572 - 29173532
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  29173572 cagagataatcgaacctgaaacctcgaggaggagcacactc 29173532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 37258360 - 37258400
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  37258360 cagagagaatcgaacctgaaaccttgaggaggagcacactc 37258400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 16436692 - 16436642
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||| ||||||||||||||||||||||||| || || |||||||||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacactc-caagtcccaagccaata 16436642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 16457881 - 16457834
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||||||||||||||||||||  |||| |||||||||||    
T  16457881 gaacatgagaccttgaggaggagcacactccaaggtcccaagccaata 16457834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 17028265 - 17028316
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||||||||||||||| || || |||| ||||||    
T  17028265 aatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaata 17028316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 21086796 - 21086757
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacact 50  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  21086796 cagagataatcgaatctgagatcttgaggaggagcacact 21086757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 30109309 - 30109360
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||  ||||||||||||||| |||||  ||||||||||    
T  30109309 aatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaata 30109360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 4793094 - 4793140
Alignment:
Q  23 aacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||| |||||||||||||||| ||||| |||| ||||||    
T  4793094 aacctgagacctcgaggaggagcacactcccaggtcccaaaccaata 4793140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 8779306 - 8779344
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  8779306 gagataatcgaacctgaaacctcgaggaggagcacactc 8779344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 467
Target Start/End: Complemental strand, 10325763 - 10325717
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatat 467  Q
    ||||||||||||||||||||||||| ||||||| || ||| ||||||    
T  10325763 accaaaattattatttttacttagttgttagtactatatatatatat 10325717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 29075863 - 29075805
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||| ||||| || |||||||||||||||| ||| | |||||||||||    
T  29075863 cagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaata 29075805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 37148096 - 37148062
Alignment:
Q  23 aacctgagaccttgaggaggagcacactctcaggt 57  Q
    ||||||||||||||||||||||||||||| |||||    
T  37148096 aacctgagaccttgaggaggagcacactcacaggt 37148062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 3315290 - 3315257
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||||||||||||||||||||||||| |||||    
T  3315290 aatcgaacctgagaccttgaggaggagcgcactc 3315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 6844810 - 6844753
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||| |||||| |||||||| ||||||| ||  ||||||| |||||    
T  6844810 agagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaata 6844753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 15485421 - 15485469
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||||||||||| |||||||||||||  |||| |||||||||    
T  15485421 aatcgaacctgagaccttga-gaggagcacactccaaggtcccaagccaa 15485469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 17155906 - 17155848
Alignment:
Q  9 agcagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||| |||| ||||||||||||||||||||||  ||||||||||| |||| ||||||    
T  17155906 agcacagagaatcaaacctgagaccttgaggaggag--cactctcaggtcccaaaccaata 17155848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 8278271 - 8278327
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||| ||| ||||| || |||||||||||||||| || || |||||||||||    
T  8278271 gagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaata 8278327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 24907567 - 24907531
Alignment:
Q  15 gataatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  24907567 gataatcgaacctgagaacttgaggaggagcatactc 24907531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 31074314 - 31074274
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||||||||||||| ||||||||||| |||||||    
T  31074314 cagagagaatcgaacctgagatcttgaggaggaacacactc 31074274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 5e-36; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 398 - 583
Target Start/End: Complemental strand, 13580512 - 13580327
Alignment:
Q  398 cagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattctta 497  Q
    |||| ||||||||| | | ||| ||||||||||||||||||||||| |||||||||||| ||| |||||||| ||||||| || ||||||||||||||      
T  13580512 caggacaccatttttttaggggcaccaaaattattatttttacttaatagttagtattatataaatatatttctttttaattcgctttgattaattctat 13580413  T
Q  498 tgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    ||||||||| |||| | | ||||||  |||| ||||||| ||||| ||||||||||||| ||  ||||| ||| ||||||||||||    
T  13580412 tgaaaatatatttttaaataactttggttataaatgaatattttgcaacaaaaaatgcaagacaaaaaatattagaataattaaaa 13580327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 362 - 522
Target Start/End: Original strand, 34141963 - 34142123
Alignment:
Q  362 gggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatag 461  Q
    ||||||| ||||||| ||||| ||||| ||||| |||||||||||| ||| | | ||| ||||||| ||||||||||| ||||||||||||| || ||||    
T  34141963 gggtggccctgagggcaggcgcgaggagcggcagcccagggcaccactttgttaggggcaccaaaactattatttttatttagtagttagtactatatag 34142062  T
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||| |||||||  | ||||||||||||||  ||||||||| |||| ||| ||||||    
T  34142063 atatatttctttttaatccgctttgattaattctattgaaaatatattttcagataacttt 34142123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 402 - 553
Target Start/End: Complemental strand, 26835744 - 26835593
Alignment:
Q  402 gcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaa 501  Q
    |||||||||| | | ||| ||||||||||||||||||||||| |||||||||  | ||| |||||||| ||||||| |  |||| |||||||||  ||||    
T  26835744 gcaccatttttttaggggcaccaaaattattatttttacttaatagttagtacaatataaatatatttctttttaattttcttttattaattctattgaa 26835645  T
Q  502 aatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaat 553  Q
    ||||| |||| |||||||||| ||||| |||||||||| || ||||||||||    
T  26835644 aatatatttttagagaactttgattataaatgaatcttgtgcaacaaaaaat 26835593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 462 - 584
Target Start/End: Original strand, 13236221 - 13236343
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||||| ||||||| || |||||||||||||| |||||||||| |||| |||||||||| ||||| || |||| ||||| |||||| |||||| ||||    
T  13236221 atatatttctttttaattcgctttgattaattctaatgaaaatatatttttagagaactttgattataaacgaattttttgcaacaaataatgcaagaag 13236320  T
Q  562 aaaaacattcgaataattaaaat 584  Q
    ||||| ||| |||||||||||||    
T  13236321 aaaaatattggaataattaaaat 13236343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 397 - 541
Target Start/End: Original strand, 22930295 - 22930439
Alignment:
Q  397 ccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattctt 496  Q
    ||||||||||||||| | | ||| ||||||||||| ||||||||||| ||||||||| || |||||||||| | ||||||| || ||||||||||||||     
T  22930295 ccagggcaccattttttcaggggcaccaaaattataatttttacttaatagttagtactatatagatatatatctttttaattcgctttgattaattcta 22930394  T
Q  497 atgaaaatatgttttaagagaacttttattatcaatgaatctttt 541  Q
     |||||| || |||| ||| |||||| ||||| ||||||| ||||    
T  22930395 ttgaaaaaatatttttagataactttgattataaatgaatatttt 22930439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 423 - 583
Target Start/End: Original strand, 9191200 - 9191351
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||| || ||||||||||||||  | ||||||| |||| |||||||| |    
T  9191200 caaaattattatttttacttagtagttat------atagatatatttatttttaattcactttgattaattctattcaaaatatatttttagagaactat 9191293  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     ||||| ||||||||||||  |||||| |||||   |||||||| |||  |||||||||||    
T  9191294 gattataaatgaatcttttacaacaaataatgc---aagaaaaatattgaaataattaaaa 9191351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 362 - 539
Target Start/End: Complemental strand, 22486784 - 22486608
Alignment:
Q  362 gggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatag 461  Q
    ||||||| ||||||| ||| | ||||  ||||| ||||||||| |||||| | | ||| ||||||||||||||| |||||||||||| | ||  ||||||    
T  22486784 gggtggccctgagggcaggtgcgaggggcggcagcccagggcatcattttttta-gggtaccaaaattattattcttacttagtagtcactacaaaatag 22486686  T
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatctt 539  Q
    |||| ||| ||||||| |   |||||||||||||  |||||||||  ||| |||||||||| ||||| ||||||||||    
T  22486685 atatgtttctttttaatttgttttgattaattctattgaaaatatcattttagagaactttgattataaatgaatctt 22486608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 604
Target Start/End: Original strand, 31383464 - 31383655
Alignment:
Q  413 taaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgtttta 512  Q
    ||||||| | |||||||||||||||| |||| |||||| ||||| |||  |||| |||||||||| | ||||| ||||||| |  |||||||||| |||     
T  31383464 taaagggcatcaaaattattattttttcttaatagttaatattatataagtataattatttttaatttcctttaattaattttattgaaaatatggtttt 31383563  T
Q  513 agagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcg 604  Q
    ||  |||||| | ||| ||||||||||||| ||| |||||| ||  |  ||| || ||||||||||| ||   |||||||||||||||||||    
T  31383564 agctaactttgaatatgaatgaatcttttgcaacgaaaaatacataacaaaatacgttcgaataatttaagaggtacaactttattgattcg 31383655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 621
Target Start/End: Complemental strand, 4350802 - 4350596
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagata---tatttatttttaactccctttgattaattcttatgaaaatatgttttaagaga 517  Q
    ||||||||||||||||||| |||||||||||||||| |||||||   ||||| ||||||| || ||||| ||||||||  ||||||||| |||| | | |    
T  4350802 accaaaattattatttttatttagtagttagtattatatagatatattatttttttttaattcgctttggttaattctattgaaaatatatttttatata 4350703  T
Q  518 acttttat----tatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagaca 613  Q
    ||||| ||    ||| || |||| ||||  ||||||||||||| ||| ||||| |||  |||||||||||  |||||| ||||||| |||| | | ||||    
T  4350702 actttgattatatataaacgaatatttttcaacaaaaaatgcaagaaaaaaaatattaaaataattaaaagggtacaa-tttattgtttcgtccaggaca 4350604  T
Q  614 ctaaaaat 621  Q
    | ||||||    
T  4350603 cgaaaaat 4350596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 471 - 598
Target Start/End: Original strand, 31277936 - 31278064
Alignment:
Q  471 tttttaactccctttgattaattcttatgaaaatatgt-tttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacat 569  Q
    |||||||||| ||||||||||||||  ||||||||| | ||| ||||||| || ||||| ||||||||||||| | | |||||| || ||||||| | ||    
T  31277936 tttttaactcactttgattaattctattgaaaatatttattttagagaaccttgattataaatgaatcttttgcacctaaaaattcaagaagaaagagat 31278035  T
Q  570 tcgaataattaaaatagtacaactttatt 598  Q
    ||||||||| ||||| | |||||||||||    
T  31278036 tcgaataataaaaatggcacaactttatt 31278064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 19703488 - 19703539
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19703488 aatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaata 19703539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 28376655 - 28376725
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaa 491  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| ||||||| ||  |||||||||    
T  28376655 accaaaattattatttttacttagtagttagtactatatagatatatttctttttaattcgttttgattaa 28376725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 33017296 - 33017238
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  33017296 cagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 621
Target Start/End: Original strand, 24606847 - 24606969
Alignment:
Q  498 tgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttat 597  Q
    ||||||||| |||||| ||||||||  |||| ||||||||||||| | ||||||||| | ||||||| |||||  ||||| |||||    |||||||| |    
T  24606847 tgaaaatattttttaa-agaactttatttataaatgaatcttttgcagcaaaaaatgtaagaagaaagacatttaaataactaaaaggacacaactttgt 24606945  T
Q  598 tgattcgcctaagacactaaaaat 621  Q
    ||||||||||||||||| ||||||    
T  24606946 tgattcgcctaagacaccaaaaat 24606969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 8794339 - 8794397
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  8794339 cagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaata 8794397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 968442 - 968386
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaata 968386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 3624660 - 3624604
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaata 3624604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 16852415 - 16852364
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  16852415 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaata 16852364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 583
Target Start/End: Original strand, 43872544 - 43872667
Alignment:
Q  460 agatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacga 559  Q
    |||||||||| || |||| |  |||| |||||||||  || |||||| |||| | |||||||| ||||| |||||||||| || |||||||||| ||  |    
T  43872544 agatatatttcttcttaatttgctttcattaattctattgtaaatatatttttaaagaactttgattataaatgaatcttgtgcaacaaaaaatacaaaa 43872643  T
Q  560 agaaaaacattcgaataattaaaa 583  Q
    ||||||| ||| ||||||||||||    
T  43872644 agaaaaatattagaataattaaaa 43872667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 6536602 - 6536544
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||| ||||||||||||||||||||||||||||||  |||| |||||||||||    
T  6536602 cagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaata 6536544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 12988502 - 12988452
Alignment:
Q  19 atcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  12988502 atcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaata 12988452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 18540380 - 18540322
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||||||||| || |||||| ||||| |||||||||||    
T  18540380 cagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaata 18540322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 471 - 605
Target Start/End: Original strand, 41849429 - 41849562
Alignment:
Q  471 tttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacatt 570  Q
    |||||||||  | ||||||||||||  ||||||||| |||| | ||||  || ||||| ||||||||||||  |||||||||  ||  |||||| |||||    
T  41849429 tttttaacttgcattgattaattctattgaaaatatatttttaaagaatcttgattattaatgaatctttttcaacaaaaaaa-caaaaagaaagacatt 41849527  T
Q  571 cgaataattaaaatagtacaactttattgattcgc 605  Q
    | |||||||||||||  ||||||||| ||||||||    
T  41849528 caaataattaaaataacacaactttactgattcgc 41849562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 2203560 - 2203516
Alignment:
Q  25 cctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||    
T  2203560 cctgagaccttgaggaggagcacactcccaggtcccaagccaata 2203516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 472
Target Start/End: Original strand, 12181824 - 12181872
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatt 472  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  12181824 aaaattattatttttacttagtaattagtattatatagaaatatttatt 12181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 12281574 - 12281518
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||| ||||||||| ||||||| |||||||||||||| |||||||||||    
T  12281574 gagaaaatcgaatctgagacctcgaggaggggcacactctcaggtcccaagccaata 12281518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 472
Target Start/End: Original strand, 12426252 - 12426300
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatt 472  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  12426252 aaaattattatttttacttagtaattagtattatatagaaatatttatt 12426300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 13236110 - 13236194
Alignment:
Q  370 ctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattatta-tttttacttagtagttagta 453  Q
    |||||||| ||| |||||  || ||||| ||||||||||| | ||| ||| ||||||||||||| ||||||||||||||||||||    
T  13236110 ctgagggtgggcaggaggggcgacaacctagggcaccattgtttaaggggcaccaaaattattattttttacttagtagttagta 13236194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 11819851 - 11819804
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    |||||||||||||||||||||||||||||||||| || || |||||||    
T  11819851 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc 11819804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 27750805 - 27750758
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    |||||||||||||||||||||||||||||||||| || || |||||||    
T  27750805 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc 27750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 28783135 - 28783084
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||| ||||||||||||||||||||||||| |||||  ||||||||||    
T  28783135 aatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaata 28783084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 29858050 - 29858101
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||| |||||||||||||||| | ||| |||||||||||    
T  29858050 aatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaata 29858101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 35690058 - 35690116
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||||||||||||||| || | ||| | |||||||||||    
T  35690058 cagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaata 35690116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 44780115 - 44780165
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaat 68  Q
    |||| ||||||||||||||||||||||||||||| || || ||||||||||    
T  44780115 aatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaat 44780165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 18897241 - 18897192
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||| |||||||||||||||||||||||||| |||| |||| ||||    
T  18897241 aatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaa 18897192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 26688936 - 26688891
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagccaa 26688891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 31408117 - 31408158
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctc 53  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  31408117 agagagaatcgaacctgaaaccttgaggaggagcacactctc 31408158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 23361643 - 23361683
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  23361643 cagagagaattgaacctgagaccttgaggaggagcacactc 23361683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 24675506 - 24675550
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcag 55  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||    
T  24675506 cagagaaaatcgaatctgagaccttgagaaggagcacactctcag 24675550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 33727874 - 33727906
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacact 50  Q
    |||||||||||||||||||||||||||||||||    
T  33727874 aatcgaacctgagaccttgaggaggagcacact 33727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 583
Target Start/End: Complemental strand, 39295586 - 39295475
Alignment:
Q  471 tttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacatt 570  Q
    |||||||||| |||||||| |||||  ||||||||  |||| ||| ||| || ||||  |||| || ||||| |||||||| | || ||||||| |||||    
T  39295586 tttttaactcactttgattgattctattgaaaatacatttttagaaaacctt-attacaaatggattttttgcaacaaaaattacatgaagaaacacatt 39295488  T
Q  571 cgaataattaaaa 583  Q
    |||||||||||||    
T  39295487 cgaataattaaaa 39295475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 5264611 - 5264568
Alignment:
Q  26 ctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||| ||||||||||||| || |||||||||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaata 5264568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 20994451 - 20994510
Alignment:
Q  11 cagagataatcgaacctgagaccttga-ggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| ||||| |||||    
T  20994451 cagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaata 20994510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 22193360 - 22193403
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcagg 56  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||    
T  22193360 gagagaatcgaacctaagaccttgaggaggagcacactcccagg 22193403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 28898490 - 28898541
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||| |  ||||||||| |||||||||||| |||||||||||||    
T  28898490 aatcgaacctgaaatattgaggaggggcacactctcagattccaagccaata 28898541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 33823084 - 33823123
Alignment:
Q  30 gaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  33823084 gaccttgaggaggagcacactctcaggtctcaagccaata 33823123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 3305182 - 3305240
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||  ||||||||||||||||||||| ||| ||| | |||| ||||||    
T  3305182 cagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaaaccaata 3305240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 467
Target Start/End: Complemental strand, 21348481 - 21348439
Alignment:
Q  425 aaattattatttttacttagtagttagtattaaatagatatat 467  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||    
T  21348481 aaattcttatttttacttagtagttagtattatatatatatat 21348439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 3524406 - 3524451
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||| |||||||||||||||||||||||  |||| |||||||||    
T  3524406 gaacctaagaccttgaggaggagcacactccaaggtcccaagccaa 3524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 13129750 - 13129693
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaat 68  Q
    |||||| |||||||||||| ||||||||||||||| ||||| || || |||| |||||    
T  13129750 cagagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaat 13129693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 21566783 - 21566816
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  21566783 aatcgaacctgagaccttgagtaggagcacactc 21566816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 583
Target Start/End: Original strand, 26801891 - 26802011
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    ||||||||  ||||||||| |||||||||||| |  ||||| ||| || | ||||||| || ||||| || || || |||| ||||||||||  |  |||    
T  26801891 atatattttgttttaactcactttgattaattatattgaaa-tatattattagagaacattgattataaacgagtcctttgcaacaaaaaatttaataag 26801989  T
Q  562 aaaaacattcgaataattaaaa 583  Q
    |||||||||| |||||||||||    
T  26801990 aaaaacattcaaataattaaaa 26802011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 36205270 - 36205237
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||||| |||||||||||||||||||||||||    
T  36205270 aatcgaacatgagaccttgaggaggagcacactc 36205237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 8059703 - 8059671
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctca 54  Q
    |||||||||||||||||||||| ||||||||||    
T  8059703 gaacctgagaccttgaggaggatcacactctca 8059671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 11928732 - 11928764
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacact 50  Q
    ||||||||||||||||| |||||||||||||||    
T  11928732 aatcgaacctgagacctcgaggaggagcacact 11928764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 18546363 - 18546407
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaa 62  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||||    
T  18546363 aatcgaacctgagacctcgaggaggagcatgctctcaggtcccaa 18546407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 28787497 - 28787529
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacact 50  Q
    |||| ||||||||||||||||||||||||||||    
T  28787497 aatcaaacctgagaccttgaggaggagcacact 28787529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 31087254 - 31087310
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||| ||||||| | | |||| ||| | |||||||||||    
T  31087254 gagataatcgaacctgagacctcgaggagggggatactcccagatcccaagccaata 31087310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 34628722 - 34628666
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||| |||||||| | ||||||| ||| | |||||||||||    
T  34628722 gagagaatcgaacctgagactttgaggagaaacacactcccagatcccaagccaata 34628666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 43594313 - 43594349
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcaca 48  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  43594313 agagagaatcgaacctgagaccttgaggaggaacaca 43594349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 8e-35; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 396 - 583
Target Start/End: Original strand, 23870020 - 23870206
Alignment:
Q  396 cccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattct 495  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||||||| || |||||||||| | ||||||| ||  |||||||||||||    
T  23870020 cccagggcaccacttttttaggggcaccaaaattattatttttacttagtagttagtactatatagatatatatttttttaattcgttttgattaattct 23870119  T
Q  496 tatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
      ||||||||| |||| ||| |||||| ||||| ||||||| ||||| ||||||||| ||| ||| ||||| |||  |||||||||||    
T  23870120 attgaaaatatatttttagataactttgattataaatgaatattttgcaacaaaaaaagcaagaa-aaaaaaattgtaataattaaaa 23870206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 396 - 583
Target Start/End: Original strand, 2113812 - 2113999
Alignment:
Q  396 cccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattct 495  Q
    ||||||||||||||||   | ||| |||||||||||||| ||||  |||||||||||| || |||||||||||| ||| ||| |  |||||||||||| |    
T  2113812 cccagggcaccattttcataggggcaccaaaattattatctttatgtagtagttagtactacatagatatatttctttctaaattgctttgattaattat 2113911  T
Q  496 tatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
      |||||||||||||| | ||||| || ||||| ||| ||||||||| || ||||||| || ||||||| |||||| |||||||||||    
T  2113912 attgaaaatatgtttttaaagaaccttgattatgaattaatcttttgcaataaaaaatacaagaagaaagacattcaaataattaaaa 2113999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 424 - 552
Target Start/End: Complemental strand, 36071685 - 36071557
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttt 523  Q
    |||||||||||||||||||  ||||||||| || |||||||||||| ||||||| |  |||||||||||||   ||||||||| |||| ||||||||||     
T  36071685 aaaattattatttttacttgatagttagtactatatagatatatttctttttaattttctttgattaattcaattgaaaatatatttttagagaactttg 36071586  T
Q  524 attatcaatgaatcttttgtaacaaaaaa 552  Q
    ||||| |||||||||| || |||||||||    
T  36071585 attataaatgaatcttatgcaacaaaaaa 36071557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 424 - 599
Target Start/End: Original strand, 12320404 - 12320580
Alignment:
Q  424 aaaattatta-tttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||| ||||||||||||||||||||| | |||||||||| | ||||||| ||  ||||||||||| |  ||| ||||| |||| | | |||||     
T  12320404 aaaattattactttttacttagtagttagtataatatagatatatatctttttaattcggtttgattaattatattgagaatatttttttaaaaaacttc 12320503  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattg 599  Q
     ||||| ||||||| ||||| ||||||||||| | ||||||||  ||| |||||||||||| || |||| |||||||    
T  12320504 gattataaatgaatattttgcaacaaaaaatgtaagaagaaaactattggaataattaaaagagcacaattttattg 12320580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 362 - 605
Target Start/End: Complemental strand, 3643333 - 3643092
Alignment:
Q  362 gggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatag 461  Q
    ||||||| |||||||| ||| |||||  ||| | |||| ||||||||||| ||| ||  | ||||||||||||||| ||||||||||||||| || ||||    
T  3643333 gggtggccctgagggtgggcaggaggggcggtagcccatggcaccattttttaa-ggacatcaaaattattatttt-acttagtagttagtactatatag 3643236  T
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||||| ||||||| |  | |||||||||| |  ||||||  | |||| | ||| |||| || || ||||||| || || |||||||||| || ||||    
T  3643235 atatatttctttttaatttgcattgattaattatattgaaaagttatttttaaagagctttgataataaatgaattttgtgcaacaaaaaatccaagaag 3643136  T
Q  562 aaaaacattcgaataattaaaatagtacaactttattgattcgc 605  Q
    ||||| ||| |||||||||||||   |||| ||||||| |||||    
T  3643135 aaaaatattggaataattaaaatgacacaattttattgtttcgc 3643092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 424 - 570
Target Start/End: Original strand, 7102144 - 7102289
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttt 523  Q
    |||||||||||||||| |  | ||||||||||| |||||||||||| ||||||| |   |||||||||| ||  ||||||||  |||| |||||||||||    
T  7102144 aaaattattatttttagtcggcagttagtattatatagatatattt-tttttaatttgttttgattaatcctattgaaaatacatttttagagaactttt 7102242  T
Q  524 attatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacatt 570  Q
    ||||| |||||||||| || |||||||| | || |||||||||||||    
T  7102243 attataaatgaatcttgtgcaacaaaaagtacaagaagaaaaacatt 7102289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 362 - 604
Target Start/End: Original strand, 7853234 - 7853475
Alignment:
Q  362 gggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatag 461  Q
    ||||||| || ||||| ||||||||   |||||||| |||||| |||| | | |  || |||||| |||||||||||||||||||||||||| || ||||    
T  7853234 gggtggccctaagggtgggcgggagaggcggcaacctagggcatcattatcttacaggcaccaaatttattatttttacttagtagttagtactatatag 7853333  T
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||| |  |||||| ||  ||||||||||  |  ||||||||| |||| ||| |||||| ||||| |||||||  |||| ||  ||||||| | ||||    
T  7853334 atatatatccttttaattcagtttgattaatgatattgaaaatatatttttagaaaactttgattataaatgaattctttgcaa-taaaaatgtaagaag 7853432  T
Q  562 aaaaacattcgaataattaaaatagtacaactttattgattcg 604  Q
    ||||  |||  |||||||||||  |||||| ||||||| ||||    
T  7853433 aaaactattgaaataattaaaagggtacaattttattgtttcg 7853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 29118469 - 29118603
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttattttt-aactccctttgattaattcttatgaaaatatgttttaagagaac 519  Q
    |||||||||||||||||||  |||||||||||| || |||||||||||| ||||| || | | ||| ||||||| |  |||||||||||||| | |||||    
T  29118469 accaaaattattatttttatgtagtagttagtactacatagatatatttctttttaaattgcttttaattaattatattgaaaatatgtttttaaagaac 29118568  T
Q  520 ttttattatcaatgaatcttttgtaacaaaaaatg 554  Q
    ||| ||||| ||||||| ||||| || ||||||||    
T  29118569 tttgattatgaatgaatattttgcaataaaaaatg 29118603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 599
Target Start/End: Complemental strand, 35372230 - 35372063
Alignment:
Q  425 aaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttta 524  Q
    ||||||||||||||||||||||||||| | ||      ||||||| ||||||| ||  ||||||||||| |  ||||||||| |||| ||||| |||| |    
T  35372230 aaattattatttttacttagtagttaggacta------tatattt-tttttaattcagtttgattaattatattgaaaatatatttttagagagctttaa 35372138  T
Q  525 ttatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattg 599  Q
    |||| || ||||||  || ||||||||||| | ||||||||| ||| ||||| ||||||| | ||||||||||||    
T  35372137 ttataaacgaatctcatgcaacaaaaaatgtaagaagaaaaatattagaatatttaaaatggcacaactttattg 35372063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 16581775 - 16581717
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  16581775 cagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaata 16581717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 23378037 - 23377979
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaataa 70  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  23378037 agagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataa 23377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 37109345 - 37109403
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  37109345 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 37109403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 423 - 556
Target Start/End: Complemental strand, 4596588 - 4596455
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    ||||||||||||||||| ||||| ||||||| || ||| |||||||| ||||||| || |||||||| ||| |  ||||||||| |  ||  | ||| ||    
T  4596588 caaaattattatttttatttagttgttagtaatatatatatatatttgtttttaattcactttgattgattttattgaaaatatatactagaaaaacctt 4596489  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgca 556  Q
     ||||| ||||||||||||| |||||||||||||    
T  4596488 gattatgaatgaatcttttgcaacaaaaaatgca 4596455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 421 - 583
Target Start/End: Original strand, 5627494 - 5627651
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    |||||||||||||||||||| | ||||||||||    ||| |||||||  ||||||| ||  ||||||||||| |  |||||| ||||||| | | ||||    
T  5627494 accaaaattattatttttacatggtagttagta----atatatatattc-tttttaattcgttttgattaattatattgaaaaaatgtttttatataact 5627588  T
Q  521 tttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     | ||||| ||||||| ||||| |||||||||||||  |||||||| ||| ||||||||||||    
T  5627589 ctgattataaatgaatattttgcaacaaaaaatgcaataagaaaaatatttgaataattaaaa 5627651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 7292793 - 7292850
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7292793 agagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaata 7292850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 429 - 621
Target Start/End: Complemental strand, 43515980 - 43515787
Alignment:
Q  429 tattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattat 528  Q
    |||| |||||||||| |||||||||||| |||||||||| | ||||||| |   ||||||||||| |  | | ||||| || | ||| |||||| |||||    
T  43515980 tattttttttacttattagttagtattatatagatatatatctttttaatttggtttgattaattatattaagaatatattgttagaaaactttgattat 43515881  T
Q  529 caatgaatcttttgtaac-aaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaat 621  Q
     ||||||||||||| ||| |||||||| | ||||||||  ||| |||||| |||||  | |||| ||||||| |||||| | ||||| ||||||    
T  43515880 aaatgaatcttttgcaacaaaaaaatgtaagaagaaaactattagaataactaaaagggcacaattttattgtttcgcccaggacaccaaaaat 43515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 7949448 - 7949506
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||| |||||||||||    
T  7949448 cagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaata 7949506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 11592147 - 11592205
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||| ||||| |||||    
T  11592147 cagagataatcgaacctaagacctggaggaggagcacactctcaggtcccaaggcaata 11592205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 583
Target Start/End: Original strand, 48653742 - 48653828
Alignment:
Q  497 atgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    |||||||||| || | ||||||  || ||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||    
T  48653742 atgaaaatattttcttagagaatcttaattatgaatgaatcttttgcaacaaaacatgcaagaagaaagacattcgaataattaaaa 48653828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 37274453 - 37274510
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaat 68  Q
    |||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  37274453 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 53178749 - 53178926
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||| | |||| |||||||||||||||| ||| ||||||||  ||||||||  |||||||||||| |  ||||  ||| |||| |  |||||||    
T  53178749 caaaattattttatttatttagtagttagtattatataaatatattt--ttttaacttactttgattaattttattgaatgtatatttttaacgaacttt 53178846  T
Q  523 tattatcaatgaatcttttgtaacaaaaaa-tgcacgaagaaaaacattcgaataattaaaatagtacaactttattgatt 602  Q
     ||||| ||||||| ||||| ||||||||| | |   |||||| |||||  |||||||||||||  |||||||||||||||    
T  53178847 gattatgaatgaat-ttttgcaacaaaaaaataccataagaaagacatttaaataattaaaataacacaactttattgatt 53178926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 604
Target Start/End: Complemental strand, 25779773 - 25779590
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    ||||||||||||||||||||||| |||||||||  |   | |||||||| |||||| ||   ||||||||||| |  | ||||||| |||  ||| ||||    
T  25779773 accaaaattattatttttacttattagttagtacgatgcacatatatttctttttacctttttttgattaattttgttaaaaatatatttgtagaaaact 25779674  T
Q  521 tttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcg 604  Q
    || ||||| |||||||||| || |||||| ||||||  ||| || | |||| |||||||| |||    ||||||||||||||||    
T  25779673 ttgattatgaatgaatcttctgcaacaaagaatgcaaaaaggaagatattcaaataattagaatgacgcaactttattgattcg 25779590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 38869843 - 38869792
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||||||||||||||| ||| | |||||||||||    
T  38869843 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaata 38869792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 628
Target Start/End: Complemental strand, 8733093 - 8732999
Alignment:
Q  534 aatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaattttaaga 628  Q
    ||||||||| ||||||||||||  ||||||||||||| ||||||| |||||   |||||||||||  |||||||| ||||| ||||  |||||||    
T  8733093 aatcttttgcaacaaaaaatgctagaagaaaaacatttgaataataaaaatgccacaactttatttgttcgcctaggacaccaaaagatttaaga 8732999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 541
Target Start/End: Complemental strand, 15986999 - 15986881
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    ||||||| |||| |||| ||||||||||||| || ||||||||||||||||||||     |||||||||||||  |||||||||  ||| | ||||| ||    
T  15986999 caaaattgttatctttaattagtagttagtactatatagatatatttatttttaatgtgttttgattaattctattgaaaatataattttaaagaacctt 15986900  T
Q  523 tattatcaatgaatctttt 541  Q
     || || ||||||||||||    
T  15986899 aatcatgaatgaatctttt 15986881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 46545793 - 46545735
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||  ||||||||||    
T  46545793 cagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaata 46545735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 478
Target Start/End: Original strand, 47059675 - 47059745
Alignment:
Q  408 ttttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaac 478  Q
    |||| ||| ||| ||||||||||||||||||||||| |||||||||||| | | |||||||| ||||||||    
T  47059675 ttttttaaggggcaccaaaattattatttttacttattagttagtattatacaaatatatttctttttaac 47059745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 478
Target Start/End: Complemental strand, 47082127 - 47082057
Alignment:
Q  408 ttttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaac 478  Q
    |||| ||| ||| ||||||||||||||||||||||| |||||||||||| | | |||||||| ||||||||    
T  47082127 ttttttaaggggcaccaaaattattatttttacttattagttagtattatacaaatatatttctttttaac 47082057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 2185028 - 2185081
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagcca 66  Q
    |||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  2185028 gagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagcca 2185081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 2622389 - 2622446
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaat 68  Q
    |||||| ||||||||||||||| | |||||||||||||||| ||||| ||||||||||    
T  2622389 cagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 5450168 - 5450115
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaataat 71  Q
    ||||||| |||| ||||||||||||||||||||| ||| |||||||||||||||    
T  5450168 aatcgaatctgaaaccttgaggaggagcacactcccagattccaagccaataat 5450115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 37720215 - 37720267
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaataa 70  Q
    ||||||||||| ||||||||||||| |||||||| ||||| ||||||||||||    
T  37720215 aatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataa 37720267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 47202433 - 47202473
Alignment:
Q  27 tgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  47202433 tgagaccttgaggaggagcacactcccaggttccaagccaa 47202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 49576890 - 49576946
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||||||||||||||||||||||||||||| || || | |||||||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaata 49576946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 494
Target Start/End: Original strand, 12167050 - 12167121
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattc 494  Q
    |||||||||||||||| ||||||| |||||| || ||| || ||||||||||||||||  ||| ||||||||    
T  12167050 caaaattattatttttgcttagtaattagtagtatatatatgtatttatttttaactcaattttattaattc 12167121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 31759659 - 31759710
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||| |||||||||||||||||||||||||| || || |||||||||||    
T  31759659 aatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaata 31759710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 46329239 - 46329192
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    |||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  46329239 aatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 1730483 - 1730541
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||| ||| ||||||| |||| ||||||||||||||||||| |||||||||||    
T  1730483 cagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaata 1730541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 10048062 - 10048004
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||| |||| ||||||| ||||| |||| |||||||||||    
T  10048062 cagagagaatcgaacctgagaccatgagaaggagcatactcttaggtcccaagccaata 10048004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 584
Target Start/End: Complemental strand, 20811597 - 20811475
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||||| |||||||||  |||| |||| || |  ||||||||| |||| | |||| ||| ||||| | ||||  ||||| ||| ||||||| | ||||    
T  20811597 atatatttgtttttaacttgctttaattatttatattgaaaatatatttttaaagaattttgattatgagtgaagtttttgcaacgaaaaatgaaagaag 20811498  T
Q  562 aaaaacattcgaataattaaaat 584  Q
     ||||||||||||||||||||||    
T  20811497 caaaacattcgaataattaaaat 20811475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 531 - 633
Target Start/End: Original strand, 37226342 - 37226444
Alignment:
Q  531 atgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaattttaagacc 630  Q
    |||||||||||| ||||||||||| |  || ||| |||||| ||||||||||| |  || | |||||||||||| | ||||||| ||| || ||||||||    
T  37226342 atgaatcttttgcaacaaaaaatgaaataaaaaagacattcaaataattaaaagaacacgattttattgattcgtccaagacaccaaagatcttaagacc 37226441  T
Q  631 aac 633  Q
    |||    
T  37226442 aac 37226444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 495
Target Start/End: Complemental strand, 40807977 - 40807927
Alignment:
Q  445 tagttagtattaaatagatatatttatttttaactccctttgattaattct 495  Q
    |||||||||||| |||||||||||| ||||||| || ||||||||||||||    
T  40807977 tagttagtattatatagatatatttctttttaattcgctttgattaattct 40807927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 21775919 - 21775960
Alignment:
Q  14 agataatcgaacctgagaccttgaggaggagcacactctcag 55  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  21775919 agataatcgaacttgagaccttgaggaggagcacactttcag 21775960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 32992687 - 32992638
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||| |||||||||||||||||||||||||  |||| |||||||||    
T  32992687 aatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 46295172 - 46295139
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||||||||||||||||||    
T  46295172 aatcgaacctgagaccttgaggaggagcacactc 46295139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 4249259 - 4249219
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  4249259 cagagagaatcaaacctgagaccttgaggaggagcacactc 4249219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 39509145 - 39509097
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcca 66  Q
    ||||||||||||||||| |||||||||||||||| ||| | ||||||||    
T  39509145 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 39509097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 42644906 - 42644962
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||| ||||||| || ||||||||||| | ||||| |||||    
T  42644906 gagataatcgaacctgagactttgaggaagaacacactctcagatcccaagtcaata 42644962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 51622567 - 51622527
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  51622567 cagagagagtcgaacctgagaccttgaggaggagcacactc 51622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 4483306 - 4483353
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||| || |||||||||| ||||| |||||    
T  4483306 gaacctgagaccttgaggaggatcagactctcaggtcccaagtcaata 4483353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 8030205 - 8030252
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    |||||||| ||||||||||||||||||||||||| || || |||||||    
T  8030205 aatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcc 8030252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 19238578 - 19238629
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||| ||||||| |||||||||||||||| || || |||||||||||    
T  19238578 aatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaata 19238629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 467
Target Start/End: Original strand, 38087652 - 38087703
Alignment:
Q  416 agggaaccaaaattattatttttacttagtagttagtattaaatagatatat 467  Q
    |||| ||||||||||||||||||||||| |||||||||  | ||||||||||    
T  38087652 agggcaccaaaattattatttttacttaatagttagtacaatatagatatat 38087703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 41683808 - 41683773
Alignment:
Q  34 ttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| ||||||||||||||||||||||||||||||    
T  41683808 ttgagaaggagcacactctcaggttccaagccaata 41683773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 47044792 - 47044741
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||| ||||||||||| |||||||| | ||||| |||||    
T  47044792 aatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaata 47044741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 55427201 - 55427252
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||| ||| ||||||| |||| ||||| |||||||||||    
T  55427201 aatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaata 55427252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 403 - 449
Target Start/End: Complemental strand, 8733213 - 8733167
Alignment:
Q  403 caccattttataaagggaaccaaaattattatttttacttagtagtt 449  Q
    ||||||||| | ||||| ||||||||||||| |||||||||||||||    
T  8733213 caccatttttttaagggcaccaaaattattaattttacttagtagtt 8733167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 19680782 - 19680840
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||| |||||||||||| |||||||||| || || |||||| ||||    
T  19680782 cagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaata 19680840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 21404815 - 21404861
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggt 57  Q
    |||||| |||| ||| |||||||||||||||||||| ||||||||||    
T  21404815 cagagagaatcaaacatgagaccttgaggaggagcatactctcaggt 21404861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 24991608 - 24991574
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagca 46  Q
    ||||| |||||||||||||||||||||||||||||    
T  24991608 agagaaaatcgaacctgagaccttgaggaggagca 24991574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 33632130 - 33632188
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||| |||| ||||||||||||||||| |||| ||  |||||||||||||    
T  33632130 cagagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagccaata 33632188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 53496959 - 53496901
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||| || ||||||| |||||||||||||||||| ||||| |||| ||||||    
T  53496959 cagagagaatcaaatctgagactttgaggaggagcacactcccaggtcccaaaccaata 53496901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 55147957 - 55147883
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattct 495  Q
    ||||||||||||||||||||||| |||| | ||  | |||||||||||| ||||||| |   |||||||||||||    
T  55147957 accaaaattattatttttacttaatagtcactacaacatagatatatttctttttaatttgttttgattaattct 55147883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 30938220 - 30938253
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||| ||||||||||||||||    
T  30938220 aatcgaacctgagacctcgaggaggagcacactc 30938253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 31826684 - 31826651
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||||| |||||||||||||||||||||||||    
T  31826684 aatcgaacttgagaccttgaggaggagcacactc 31826651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 37980149 - 37980197
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||||||||||| |||||||||||||  |||| |||||||||    
T  37980149 aatcgaacctgagaccttga-gaggagcacactccaaggtcccaagccaa 37980197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 48653269 - 48653310
Alignment:
Q  401 ggcaccattttataaagggaaccaaaattattatttttactt 442  Q
    ||||||||||| |||  |||||||||||||||||||||||||    
T  48653269 ggcaccattttttaagtggaaccaaaattattatttttactt 48653310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 56410025 - 56409977
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||||||||||| |||||||||||||  |||| |||||||||    
T  56410025 aatcgaacctgagaccttga-gaggagcacactccaaggtcccaagccaa 56409977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 8931085 - 8931121
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctca 54  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  8931085 aatcgaacttgagaccttcaggaggagcacactctca 8931121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 9693499 - 9693527
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagca 46  Q
    |||||||||||||||||||||||||||||    
T  9693499 aatcgaacctgagaccttgaggaggagca 9693527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 13015507 - 13015451
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||| |||||| | |||||||||||||||| || || |||||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaata 13015451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 14451751 - 14451783
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctca 54  Q
    |||||| ||||||||||||||||||||||||||    
T  14451751 gaacctaagaccttgaggaggagcacactctca 14451783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 17618353 - 17618305
Alignment:
Q  21 cgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| |||||||| |||||||||||||||| |||||  ||||||||||    
T  17618353 cgaacatgagacctcgaggaggagcacactcccaggtctcaagccaata 17618305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 21375852 - 21375816
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctca 54  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  21375852 aatcgaatctgagagcttgaggaggagcacactctca 21375816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 24234725 - 24234669
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||| ||||||||| |||| |||||||||| || || |||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaata 24234669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 24827897 - 24827849
Alignment:
Q  21 cgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||| |||||||||| ||||| ||||| ||||| |||||    
T  24827897 cgaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaata 24827849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 484 - 556
Target Start/End: Complemental strand, 40807914 - 40807842
Alignment:
Q  484 ttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgca 556  Q
    ||||||||||||  | |||||||||||| ||| ||| || ||||| |||||||||| |  |||||||||||||    
T  40807914 ttgattaattctattaaaaatatgtttttagataacattgattatgaatgaatcttatccaacaaaaaatgca 40807842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 606
Target Start/End: Complemental strand, 51002700 - 51002624
Alignment:
Q  530 aatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcc 606  Q
    |||||||||||||  | |||||||| | ||||||| ||||| ||||||||||||  | |||| |||||| |||||||    
T  51002700 aatgaatcttttgcgataaaaaatgtaagaagaaagacatttgaataattaaaaaggaacaagtttatttattcgcc 51002624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 583
Target Start/End: Complemental strand, 55147739 - 55147639
Alignment:
Q  483 tttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaa 582  Q
    ||||||||||| |  ||||||| | |||| |||||||||| ||||| |||||||||| |  ||||||||||  |  | |||||| ||| |||||||||||    
T  55147739 tttgattaattttattgaaaatgtctttttagagaactttgattataaatgaatcttgtacaacaaaaaatagaatatgaaaaatattagaataattaaa 55147640  T
Q  583 a 583  Q
    |    
T  55147639 a 55147639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 398 - 582
Target Start/End: Original strand, 35812589 - 35812774
Alignment:
Q  398 cagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattctta 497  Q
    |||||||||||||| | | ||| | ||||||||||||||||||||| || |||||| || |||||||||||| ||||||| || ||||||| ||||||      
T  35812589 cagggcaccatttttttaggggcatcaaaattattatttttacttaataattagtactatatagatatatttctttttaattcgctttgatcaattctat 35812688  T
Q  498 tga-aaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaa 582  Q
    ||| |||||| |||| ||| |||||| ||||| ||||||| ||||| ||||||||||||| |||||| || ||| |||||||||||    
T  35812689 tgataaatatatttttagataactttgattataaatgaatattttgcaacaaaaaatgcaagaagaataatattggaataattaaa 35812774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 423 - 583
Target Start/End: Complemental strand, 26914472 - 26914312
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||| |||||| ||  ||||||||||| |  ||||||||| |||| | | ||| ||    
T  26914472 caaaattattatttttacttagtagttagtattatatacatatgtttacttttaattcgttttgattaattatattgaaaatatatttttaaataacgtt 26914373  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     ||||| ||||||| ||||| ||||||||||||| ||||||||| |||  |||||||||||    
T  26914372 aattataaatgaatattttgcaacaaaaaatgcaagaagaaaaatattaaaataattaaaa 26914312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 361 - 583
Target Start/End: Complemental strand, 3940842 - 3940621
Alignment:
Q  361 agggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaata 460  Q
    |||||| | |||||||| | ||||||||| || |  |||||||| |||||| | ||| | | | |||||||||||||||||||||||| ||||| | |||    
T  3940842 agggtgcccctgagggtggacgggaggaatggtagtccagggcatcatttttttaagcgcatccaaattattatttttacttagtagtaagtataatata 3940743  T
Q  461 gatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaa 560  Q
    ||||||||| ||||||| |  ||||||||||||||  | ||||||| |||| | |||||||| ||||| ||| |||||| || ||| |||||| ||  ||    
T  3940742 gatatatttctttttaatttactttgattaattctatttaaaatatctttttaaagaactttgattataaataaatcttgtgcaac-aaaaatacaaaaa 3940644  T
Q  561 gaaaaacattcgaataattaaaa 583  Q
    |||||| ||| ||||||||||||    
T  3940643 gaaaaatattagaataattaaaa 3940621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 364 - 621
Target Start/End: Complemental strand, 40351956 - 40351700
Alignment:
Q  364 gtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagat 463  Q
    ||||| |||||||| || ||||||  ||| | ||||||| || ||| | | ||||| |||||| |||||||||||||| |||||||||||||| ||||||    
T  40351956 gtggccctgagggtgggagggaggggcggaagcccagggtacaattattttaagggcaccaaagttattatttttactcagtagttagtattatatagat 40351857  T
Q  464 atattta-tttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaaga 562  Q
    ||| ||| ||||||| |  | ||| ||||||||  ||||||||| |||| | |||||||| ||||| ||| |||||||   ||||||||||||| ||  |    
T  40351856 ataattattttttaattatccttgtttaattctattgaaaatatatttttaaagaactttgattataaataaatctttatcaacaaaaaatgcaaga--a 40351759  T
Q  563 aaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaat 621  Q
    |||| ||| ||||||||||||  | | || ||||||| |||| | ||||||| ||||||    
T  40351758 aaaaaattagaataattaaaagggaagaattttattgtttcgtccaagacaccaaaaat 40351700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 394 - 584
Target Start/End: Complemental strand, 13431822 - 13431633
Alignment:
Q  394 aacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaatt 493  Q
    |||| ||||||||||||| | | | | || |||||||||||| ||| ||||||| |||||||| |||||||||||||||||| | |   ||||| |||||    
T  13431822 aacctagggcaccatttttttaggagcactaaaattattattcttatttagtaggtagtattatatagatatatttatttttgattttttttgaataatt 13431723  T
Q  494 cttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaat 584  Q
    ||  ||||||||| |||   |||||| || ||||| ||||||||||| | |||||||||| || ||| |||||| ||||||||||||||||    
T  13431722 ctattgaaaatatatttgtggagaaccttgattatgaatgaatctttagcaacaaaaaatacaagaa-aaaaactttcgaataattaaaat 13431633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 362 - 630
Target Start/End: Original strand, 21828100 - 21828367
Alignment:
Q  362 gggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatag 461  Q
    ||||||| |||||||  |||| ||||  | ||| |||||||||||||||  | | ||| |  |||||||||||||||||||  |||| | ||  ||||||    
T  21828100 gggtggccctgagggagggcgcgaggggctgcagcccagggcaccatttctttaggggcataaaaattattatttttacttcatagtcactacaaaatag 21828199  T
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||||| |||||||||   |||||||||| ||  ||||||||  ||||| ||||||||| ||||| |||||||||| || ||||||||||  | || |    
T  21828200 atatatttctttttaacttgttttgattaatgctattgaaaatacttttta-gagaactttgattataaatgaatcttgtgcaacaaaaaataaaagacg 21828298  T
Q  562 aaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaattttaagacc 630  Q
    ||||| ||| ||||||||||||  |||||| ||| ||  ||||||| || ||| |||||| ||| ||||    
T  21828299 aaaaatattagaataattaaaagggtacaatttttttctttcgcctcaggcaccaaaaatcttaggacc 21828367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 585
Target Start/End: Complemental strand, 9429527 - 9429304
Alignment:
Q  361 agggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaata 460  Q
    |||||||| |||||||| ||| | ||| |||  |||||| | || |||||| | | ||| |||||||||| |||||||| ||| |||||||||||| |||    
T  9429527 agggtggccctgagggtgggcagaagggacgataacccaagacatcatttttttaggggcaccaaaattagtatttttatttaatagttagtattatata 9429428  T
Q  461 gatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaa 560  Q
     |||||||| |||||| |||  |||||||||||||  |||||||||  ||||| |||||||  ||||| ||| ||| ||||| ||||  ||||||  |||    
T  9429427 aatatatttctttttatctcgttttgattaattctattgaaaatattatttaa-agaacttcgattataaataaattttttgcaacagcaaatgctagaa 9429329  T
Q  561 gaaaaacattcgaataattaaaata 585  Q
    | |||| |||  |||||||||||||    
T  9429328 gtaaaatattaaaataattaaaata 9429304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 430 - 581
Target Start/End: Original strand, 12177813 - 12177965
Alignment:
Q  430 attatttttacttagtagttagtattaaatagatatattta--tttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttatta 527  Q
    |||||||||||||||||||||||| || |||||||||| ||  ||||||| ||  ||| ||||||| |  ||||||||| |||| ||| ||| |||||||    
T  12177813 attatttttacttagtagttagtactatatagatatatatatctttttaattcggtttaattaattttattgaaaatatatttttagaaaac-tttatta 12177911  T
Q  528 tcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaa 581  Q
    |  |||||||||||| ||||||||||| | ||||||||  ||| ||||||||||    
T  12177912 tagatgaatcttttgcaacaaaaaatgtaagaagaaaactattagaataattaa 12177965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 421 - 583
Target Start/End: Complemental strand, 33480621 - 33480460
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    |||||||||||||||||||  || ||||||||| || |||||||||||| ||| ||| |  |||||||||||| |  | |||||||||||| | |||||     
T  33480621 accaaaattattatttttatgtaatagttagtactacatagatatatttctttctaaattgctttgattaattatattaaaaatatgtttttaaagaac- 33480523  T
Q  521 tttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     ||||||| ||| |||||| || || ||||||| || ||||||| |||||| |||||||||||    
T  33480522 cttattatgaattaatcttctgcaataaaaaatacaagaagaaagacattcaaataattaaaa 33480460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 583
Target Start/End: Original strand, 3351119 - 3351240
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||||| ||||||| || ||||||||||||||  ||||| ||| |||| ||| |||||| ||||| ||||||| ||||  ||||||||||||| ||||    
T  3351119 atatatttctttttaattcgctttgattaattctattgaaattatatttttagataactttgattataaatgaatattttacaacaaaaaatgcaagaag 3351218  T
Q  562 aaaaacattcgaataattaaaa 583  Q
    ||||| |||  |||||||||||    
T  3351219 aaaaatattttaataattaaaa 3351240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 435 - 554
Target Start/End: Complemental strand, 42336062 - 42335943
Alignment:
Q  435 ttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatga 534  Q
    ||||| ||| |||||||||||| |||||||||||| ||||||| ||  ||| ||||||| |  ||||||||| |||| | | |||||| ||||| |||||    
T  42336062 ttttagttaatagttagtattatatagatatatttctttttaattcggtttaattaattatagtgaaaatatatttttaaaaaactttgattataaatga 42335963  T
Q  535 atcttttgtaacaaaaaatg 554  Q
    |||||||| |||||||||||    
T  42335962 atcttttgcaacaaaaaatg 42335943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 554
Target Start/End: Complemental strand, 22318791 - 22318662
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttt 523  Q
    |||||||||||||||| |||||||||| ||||| |||||||| | | |||| || ||| ||||||||||| |  ||| ||||| |||| ||| ||||||     
T  22318791 aaaattattatttttatttagtagttaatattatatagatatgtatctttt-aattccgtttgattaattatattgagaatatatttttagaaaacttta 22318693  T
Q  524 attatcaatgaatcttttgtaacaaaaaatg 554  Q
    ||||| ||| ||||||||| |||||||||||    
T  22318692 attataaataaatcttttgcaacaaaaaatg 22318662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 583
Target Start/End: Original strand, 26448411 - 26448533
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||||| ||||||| || ||||||||||||||  | ||| ||| |||| |||||||||| || || ||||||||||||| ||||||||||||| |||     
T  26448411 atatatttctttttaattcactttgattaattctactaaaagtatatttttagagaactttgataataaatgaatcttttgcaacaaaaaatgcaagaaa 26448510  T
Q  562 aaaaacattcg-aataattaaaa 583  Q
    ||||| ||| | |||||||||||    
T  26448511 aaaaatatttgaaataattaaaa 26448533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 26459404 - 26459462
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  26459404 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 26459462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 14058333 - 14058277
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  14058333 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaata 14058277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 14368361 - 14368305
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  14368361 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaata 14368305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 401 - 553
Target Start/End: Complemental strand, 21129478 - 21129326
Alignment:
Q  401 ggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatga 500  Q
    ||||||||||| | | ||| || ||| |||||||| ||| |||||||| | ||  |||||||||||||| ||||||| |   |||||||||||||  |||    
T  21129478 ggcaccatttttttaggggtactaaatttattattcttatttagtagtcactacaaaatagatatatttctttttaatttggtttgattaattctattga 21129379  T
Q  501 aaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaat 553  Q
    |||||| |||| |||||| ||| ||||| ||| ||||||||| || |||||||    
T  21129378 aaatatttttttagagaattttgattataaattaatcttttgcaataaaaaat 21129326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 2962541 - 2962483
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  2962541 cagagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaaccaata 2962483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 21558210 - 21558152
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||||||||||||||||| ||| |||||||||| |||||    
T  21558210 cagagagaatcgaacctgagaccttgaggaggagcacattcttaggttccaagtcaata 21558152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 441 - 583
Target Start/End: Original strand, 26912345 - 26912486
Alignment:
Q  441 ttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttt 540  Q
    ||||||||||||| || |||||||||||| ||||||| || ||||||||||||||  | || |||| |||| ||| |||||| ||||  |||||||  ||    
T  26912345 ttagtagttagtactatatagatatatttctttttaattcgctttgattaattctattcaagatatatttttagataactttgattacaaatgaat-att 26912443  T
Q  541 tgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    ||| ||| |||||||| ||| || || ||| ||||||||||||    
T  26912444 tgtcacataaaatgcaagaaaaataatattagaataattaaaa 26912486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 467
Target Start/End: Complemental strand, 30095922 - 30095845
Alignment:
Q  390 cggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatat 467  Q
    ||||| |||||||||||||||| | | ||| |||||||||||||||||||||||||||||| || || ||| ||||||    
T  30095922 cggcagcccagggcaccatttttttaggggcaccaaaattattatttttacttagtagttattaatatatatatatat 30095845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 43215265 - 43215208
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||| |||||||||||    
T  43215265 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaata 43215208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 45709704 - 45709760
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||    
T  45709704 gagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaata 45709760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 480
Target Start/End: Complemental strand, 21292861 - 21292802
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactc 480  Q
    |||||||||||||||||||||||||||||| ||| | ||| |||||||| ||||||||||    
T  21292861 accaaaattattatttttacttagtagttaatatcatataaatatatttctttttaactc 21292802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 22760938 - 22760887
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  22760938 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaata 22760887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 17113877 - 17113819
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||| ||||||||||||||| ||||||||| ||||||| |||||||||    
T  17113877 cagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaata 17113819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 11700247 - 11700190
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaat 68  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| ||  |||||||||    
T  11700247 cagagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaat 11700190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 23552199 - 23552142
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||| ||||| |||||    
T  23552199 agagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaata 23552142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 38374600 - 38374649
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  38374600 aatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaa 38374649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 39631925 - 39631868
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| ||||||||||||||||||||||||||||  |||| ||||| |||||||||||    
T  39631925 agagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaata 39631868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 9183185 - 9183225
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  9183185 cagagataatcgaacctgagactttgaggaggagcacactc 9183225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 31835270 - 31835234
Alignment:
Q  15 gataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  31835270 gataatcgaacctgagaccttgaggaggagcacactc 31835234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 583
Target Start/End: Original strand, 36066113 - 36066271
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||||||||||||||||| ||| |||   ||| ||| ||||| ||||||| | |||  ||||||| |  ||||||||| |||| |||||| |||    
T  36066113 caaaattattatttttacttagtaattaatatcgcatacata-atttaattttaacccgcttaaattaattgtattgaaaatatatttttagagaatttt 36066211  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     ||||| ||| ||||||||  ||| |||||| || ||||||| ||||| |||||| |||||    
T  36066212 gattatgaataaatcttttacaac-aaaaatacaagaagaaagacatttgaataactaaaa 36066271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 7499925 - 7499976
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||| || |||||||| |||||||||| |||||||||||    
T  7499925 aatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaata 7499976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 17041008 - 17041063
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaat 68  Q
    |||| |||||||||||||||||||||||||||||||||  ||| | ||||||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaat 17041063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 20335832 - 20335883
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||| |||||||||||||||| || || |||||||||||    
T  20335832 aatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaata 20335883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 30442563 - 30442512
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||| |||||||||||||||||| |||| ||||| |||||||||||    
T  30442563 aatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaata 30442512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 43590982 - 43590931
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||| |||||||||||||||||| || || |||||||||||    
T  43590982 aatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaata 43590931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 3280495 - 3280537
Alignment:
Q  27 tgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  3280495 tgagaccttgaggaggagcacactctcgggtcccaagccaata 3280537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 5273586 - 5273640
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||| |||| ||||| |||||||||||||||||||||||| |||| |||||||||    
T  5273586 gagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaa 5273640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 7721451 - 7721393
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||| |||||||||||||||||| |||||| ||||| |||| ||||||    
T  7721451 cagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaata 7721393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 22035478 - 22035424
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||| ||||||||||| | ||| |||||||||||||||||||||| |||||||||    
T  22035478 gagagaatcgaacctgggtcctcgaggaggagcacactctcaggtcccaagccaa 22035424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 29916809 - 29916843
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactct 52  Q
    |||||||||||||||||||||||||||||||||||    
T  29916809 aatcgaacctgagaccttgaggaggagcacactct 29916843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 30579417 - 30579359
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||||||||||| | |||||| |||||  ||||||||||    
T  30579417 cagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaata 30579359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 33222452 - 33222394
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||||||||| ||| |||||  ||||| |||||||||||    
T  33222452 cagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaata 33222394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 48772016 - 48771962
Alignment:
Q  15 gataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||  ||||||||||||||| ||| | |||||||||||    
T  48772016 gataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaata 48771962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 5830598 - 5830655
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||| ||| | |||||||||||| |||||| |||||||||| ||||||    
T  5830598 agagataatcgaacttgaaatcttgaggaggagtacactcccaggttccaaaccaata 5830655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 7801253 - 7801204
Alignment:
Q  20 tcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||| |||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaata 7801204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 583
Target Start/End: Complemental strand, 15133397 - 15133276
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||| ||||| ||| ||  |||||||||||||  | |||| || |||| ||| |||||| ||||| ||||||| ||||  ||||||||||| | |||     
T  15133397 atatatatatttctaattcgttttgattaattctatttaaaaaatatttttagataactttgattataaatgaatattttacaacaaaaaatgtaagaaa 15133298  T
Q  562 aaaaacattcgaataattaaaa 583  Q
    ||||| ||| ||||||||||||    
T  15133297 aaaaatatttgaataattaaaa 15133276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 2883032 - 2882992
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  2883032 cagagagaattgaacctgagaccttgaggaggagcacactc 2882992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 5579240 - 5579284
Alignment:
Q  23 aacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||||||||||||||||||||  |||| |||||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaa 5579284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 13106776 - 13106816
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| ||||||||||||||||||||||||||| ||||||    
T  13106776 cagagagaatcgaacctgagaccttgaggaggagtacactc 13106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 15137635 - 15137595
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  15137635 cagagagaatctaacctgagaccttgaggaggagcacactc 15137595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 20952145 - 20952201
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||| ||||||  |||||||||||||||||| ||||| |||| ||||||    
T  20952145 gagataatcgaatctgagattttgaggaggagcacactcccaggtcccaaaccaata 20952201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 21570026 - 21570078
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaag 63  Q
    |||||| |||||||| ||||||||||||||||||| |||||||| || |||||    
T  21570026 cagagaaaatcgaacttgagaccttgaggaggagcgcactctcaagtcccaag 21570078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 41519258 - 41519298
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  41519258 cagagagaagcgaacctgagaccttgaggaggagcacactc 41519298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 15905675 - 15905725
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||  ||||||||||||||| ||||| |||||||||||    
T  15905675 aatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaata 15905725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 18363777 - 18363738
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  18363777 agagagaatcaaacctgagaccttgaggaggagcacactc 18363738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 19553524 - 19553478
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  19553524 gaacctaagaccttgaggaggagcacactcccagg-tccaagccaata 19553478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 474
Target Start/End: Complemental strand, 31329716 - 31329665
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttt 474  Q
    |||||||||||||||||||| ||| ||||||||| ||| |||||||| ||||    
T  31329716 caaaattattatttttacttcgtaattagtattatatacatatatttctttt 31329665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 32982336 - 32982407
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattct 495  Q
    ||||||||||||||||||| |||||||| |    ||| |||||||| ||||||||||  |||||||||||||    
T  32982336 aaaattattatttttacttggtagttaggagagtatacatatatttttttttaactcattttgattaattct 32982407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 559 - 602
Target Start/End: Original strand, 32982464 - 32982507
Alignment:
Q  559 aagaaaaacattcgaataattaaaatagtacaactttattgatt 602  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||    
T  32982464 aagacaaaaattcgaataattaaaataatacaactttattgatt 32982507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 41519106 - 41519145
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactct 52  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  41519106 gagataatcgaatctgagaccttgagaaggagcacactct 41519145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 42712033 - 42711982
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||| ||||||||||||||||||||||||| || || |||||| ||||    
T  42712033 aatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaata 42711982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 25021345 - 25021387
Alignment:
Q  27 tgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||| ||||| |||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaata 25021387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 25655222 - 25655280
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||| ||||||||||||| ||||||| ||| | ||||| |||||    
T  25655222 cagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaata 25655280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 48
Target Start/End: Complemental strand, 30301955 - 30301925
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcaca 48  Q
    |||||||||||||||||||||||||||||||    
T  30301955 aatcgaacctgagaccttgaggaggagcaca 30301925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 33869439 - 33869497
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||| ||||||||||| |||||||||||  |||||  ||||||||||    
T  33869439 cagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaata 33869497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 9608624 - 9608677
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    ||||| |||||||||||||| |||||||||||| |||||| ||| | |||||||    
T  9608624 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcc 9608677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 9836196 - 9836249
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    ||||| |||||||||||||| |||||||||||| |||||| ||| | |||||||    
T  9836196 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcc 9836249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 466
Target Start/End: Complemental strand, 15134582 - 15134537
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatata 466  Q
    ||||||||||||||||||||||||||| ||||| || ||| |||||    
T  15134582 accaaaattattatttttacttagtagctagtactatatatatata 15134537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 18056776 - 18056809
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||||||||||||||| |||||||||||||||    
T  18056776 aatcgaacctgagaccttcaggaggagcacactc 18056809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 18891147 - 18891106
Alignment:
Q  16 ataatcgaacctgagaccttgaggaggagcacactctcaggt 57  Q
    ||||| |||| |||||||||||||||||||||||||| ||||    
T  18891147 ataattgaacttgagaccttgaggaggagcacactctaaggt 18891106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 29385744 - 29385777
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||| |||||||||||||||||||||||||||||    
T  29385744 aatcaaacctgagaccttgaggaggagcacactc 29385777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 450
Target Start/End: Original strand, 37996507 - 37996536
Alignment:
Q  421 accaaaattattatttttacttagtagtta 450  Q
    ||||||||||||||||||||||||||||||    
T  37996507 accaaaattattatttttacttagtagtta 37996536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 42836008 - 42836053
Alignment:
Q  24 acctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||| ||||||||| |||||||||| ||||| |||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaata 42836053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 2446388 - 2446332
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||| ||||| || |||||||||||||||| || || |||||||||||    
T  2446388 gagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaata 2446332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 5668567 - 5668623
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||| |||||||||| |||||||||||||||  || || |||||||||||    
T  5668567 gagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaata 5668623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 29785302 - 29785334
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacact 50  Q
    |||||||| ||||||||||||||||||||||||    
T  29785302 aatcgaacatgagaccttgaggaggagcacact 29785334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 30217954 - 30217922
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacact 50  Q
    |||||||| ||||||||||||||||||||||||    
T  30217954 aatcgaacttgagaccttgaggaggagcacact 30217922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 545
Target Start/End: Original strand, 36572901 - 36572980
Alignment:
Q  465 tatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaa 545  Q
    |||||||||||||||| |||| |||||||| |||  ||||||||||| ||| ||  || | ||| ||||||||||||||||    
T  36572901 tatttatttttaactctctttcattaattc-tattgaaatatgtttttagataatcttaaatatgaatgaatcttttgtaa 36572980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 524 - 556
Target Start/End: Original strand, 37996570 - 37996602
Alignment:
Q  524 attatcaatgaatcttttgtaacaaaaaatgca 556  Q
    ||||| |||||||||||||||||||||||||||    
T  37996570 attataaatgaatcttttgtaacaaaaaatgca 37996602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 5e-33; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 398 - 553
Target Start/End: Complemental strand, 33510252 - 33510096
Alignment:
Q  398 cagggcaccattttataaaggga-accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattctt 496  Q
    |||||||||||||| | || ||| | ||||||||||||||||||||||||||||||  || |||||||||||| ||||||| ||  ||||||||||||      
T  33510252 cagggcaccatttttttaatggacatcaaaattattatttttacttagtagttagtgctacatagatatatttctttttaattcgttttgattaattcca 33510153  T
Q  497 atgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaat 553  Q
     ||||||||| |||| |||||||||| ||||| ||||||||||||| ||||||||||    
T  33510152 ttgaaaatatatttttagagaactttaattataaatgaatcttttgcaacaaaaaat 33510096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 434 - 604
Target Start/End: Complemental strand, 33682780 - 33682610
Alignment:
Q  434 tttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatg 533  Q
    |||||||||| ||||||||| || |||||||||||| ||||||| || ||||||||||||||  | ||||||| |||| | ||||| || | ||| || |    
T  33682780 tttttacttaatagttagtactagatagatatatttctttttaattcactttgattaattctattaaaaatatttttttaaagaaccttgactataaagg 33682681  T
Q  534 aatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcg 604  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||||||||  | |||||||||||||||||    
T  33682680 aatcttttgtaacaacaaatgctagaagaaagacattcgaaaaattaaaagggcacaactttattgattcg 33682610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 421 - 604
Target Start/End: Complemental strand, 168814 - 168635
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    |||| |||||||||||| |||||||||| || | || ||| ||||||| ||||||||||| || |||||||||||  ||||||||| ||||| ||||||     
T  168814 accataattattatttt-acttagtagtcagcactatataaatatatt-atttttaactcgctgtgattaattctattgaaaatatatttta-gagaacc 168718  T
Q  521 tttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcg 604  Q
    || ||||| |||||||||||||||||||||||||||  |||||| | ||| |||||||||||  | | ||||||||||||||||    
T  168717 ttgattatgaatgaatcttttgtaacaaaaaatgcaacaagaaagaaattagaataattaaagga-tgcaactttattgattcg 168635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 424 - 586
Target Start/End: Original strand, 15670919 - 15671078
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttt 523  Q
    ||||||||||||||||||||||||||| ||  | |||||||||||| ||||||| |   |||||||||||||  ||||||||| |||| ||| ||||||     
T  15670919 aaaattattatttttacttagtagttattacaatatagatatatttctttttaatttgttttgattaattctattgaaaatatctttttagaaaactttg 15671018  T
Q  524 attatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatag 586  Q
    ||||| |||||||||| || ||||||| || |   |||||||| ||| |||||||||||||||    
T  15671019 attataaatgaatcttgtgcaacaaaatatac---aagaaaaatattagaataattaaaatag 15671078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 398 - 583
Target Start/End: Complemental strand, 8266749 - 8266563
Alignment:
Q  398 cagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgatt-aattctt 496  Q
    |||| ||||||||| |||| || ||||||||||| |||||||| || |||||||||||| |||| |||||||  |||||||||  ||||||| || |||     
T  8266749 caggacaccattttttaaaaggcaccaaaattatgatttttacgtaatagttagtattatataggtatattttcttttaactctgtttgattaaactcta 8266650  T
Q  497 atgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     |||||||||||||| ||||||| || ||||| |||||| |||||  |||||||||| ||  |||| | |||||  |||||||||||    
T  8266649 ctgaaaatatgttttcagagaaccttgattattaatgaaccttttacaacaaaaaatacaaaaagagagacatttaaataattaaaa 8266563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 423 - 544
Target Start/End: Complemental strand, 54417151 - 54417030
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||||||||||||| |||||||||  || ||||||| ||||  |||||| || ||||||||||||||  |||||||||||||| | |||| |||    
T  54417151 caaaattattatttttacttggtagttagtgctatatagatacatttccttttaattcactttgattaattctactgaaaatatgtttttaaagaatttt 54417052  T
Q  523 tattatcaatgaatcttttgta 544  Q
     ||||| |||||||||||||||    
T  54417051 gattataaatgaatcttttgta 54417030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 416 - 556
Target Start/End: Original strand, 11383584 - 11383726
Alignment:
Q  416 agggaaccaaaattattatttttacttagtagttagtattaaatagatatatttattt--ttaactccctttgattaattcttatgaaaatatgttttaa 513  Q
    |||| ||||||||||||||||||| ||||||||||||| || ||| |||||| ||| |  |||| || |||||||||||||   |||||| || |||| |    
T  11383584 agggcaccaaaattattatttttatttagtagttagtaatatatatatatatatatatctttaattcgctttgattaattcaattgaaaaaatattttta 11383683  T
Q  514 gagaacttttattatcaatgaatcttttgtaacaaaaaatgca 556  Q
    || |||||| ||||| ||||||| ||||| |||||||||||||    
T  11383684 gataactttgattataaatgaatattttgcaacaaaaaatgca 11383726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 456 - 630
Target Start/End: Complemental strand, 27538881 - 27538709
Alignment:
Q  456 aaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgc 555  Q
    |||||||||||||||||||||| || ||||||||||||||  ||||||||| |||| | | |||||| ||||  ||||||| ||||| |||||||||| |    
T  27538881 aaatagatatatttatttttaattctctttgattaattctattgaaaatatatttttaaataactttgattagaaatgaatattttgcaacaaaaaatac 27538782  T
Q  556 acgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaattttaagacc 630  Q
    | ||| ||||| |||  |||| ||||||| |||||| ||||||| |||  | ||||||| |||||| ||| ||||    
T  27538781 aagaa-aaaaatattgaaatagttaaaatggtacaa-tttattgtttcatccaagacaccaaaaatcttaggacc 27538709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 16354886 - 16354944
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  16354886 cagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaata 16354944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 604
Target Start/End: Original strand, 2758073 - 2758258
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    ||||||||||||||||||| ||||||||||||| || ||| | |||||| |||||||||   |||||||| |||| ||||| |||| |||| | | |||     
T  2758073 accaaaattattatttttaattagtagttagtactatataaacatatttctttttaactagttttgattatttctaatgaatatatatttttacataacc 2758172  T
Q  521 tttattatcaatgaatcttttgtaa---caaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcg 604  Q
    ||  |||| ||||||||||||  ||    ||||||   || ||||||||||||| ||||||||||| |  |||||||||||||||||    
T  2758173 ttggttatgaatgaatctttttaaaaagaaaaaaaaatac-aagaaaaacattcaaataattaaaagatcacaactttattgattcg 2758258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 27093355 - 27093413
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  27093355 cagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaata 27093413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 53413027 - 53412969
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||| |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  53413027 cagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaata 53412969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 10445133 - 10445190
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaat 68  Q
    |||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  10445133 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 583
Target Start/End: Original strand, 11365106 - 11365207
Alignment:
Q  482 ctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaa 581  Q
    |||||||||||||   |||||| || |||| | | |||||| ||||| ||||||| ||||| ||||||||||||| ||||||||| ||| ||||||||||    
T  11365106 ctttgattaattcaattgaaaagatatttttaaataactttgattataaatgaatattttgcaacaaaaaatgcaagaagaaaaatatttgaataattaa 11365205  T
Q  582 aa 583  Q
    ||    
T  11365206 aa 11365207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 37788460 - 37788517
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||    
T  37788460 agagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaata 37788517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 21960631 - 21960575
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaata 21960575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 15048055 - 15048109
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    |||||||||||||||||||||||||||||||||||||| || ||| | |||||||    
T  15048055 cagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcc 15048109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 2667943 - 2667886
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||| | |||||||||||    
T  2667943 agagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaata 2667886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 20501776 - 20501727
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaa 62  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  20501776 gagagaatcgaacctgagaccttaaggaggagcacactctcaggtcccaa 20501727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 32651433 - 32651490
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| ||||||| |||||| ||||||||||||||||||| ||||| |||||||||||    
T  32651433 agagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaata 32651490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 44743851 - 44743904
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagcca 66  Q
    |||||||||||||||||||||| |||||||||||||||| ||| | ||||||||    
T  44743851 gagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 14186727 - 14186672
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacactc-caggtcccaagacaata 14186672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 8170747 - 8170696
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||| |||||||||||| || ||| ||||||||||    
T  8170747 aatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaata 8170696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 19154706 - 19154655
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||| ||||||||||||||||||||   ||||||||||    
T  19154706 aatcgaacctgagacctttaggaggagcacactctcaggcctcaagccaata 19154655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 30311381 - 30311334
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    |||||||||||||||||||||||||||||||||| ||| | |||||||    
T  30311381 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagcc 30311334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 421 - 603
Target Start/End: Original strand, 39838467 - 39838645
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    ||||||||||||  ||||| ||| ||||||||| |  ||| |||||||| ||||||||||  | ||||||||| |  ||||||||| ||| |||| | ||    
T  39838467 accaaaattatt--ttttaattactagttagtactgtataaatatatttctttttaactcattatgattaattatattgaaaatatttttaaaga-acct 39838563  T
Q  521 tttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattc 603  Q
    || ||||| ||||||||||||| ||||||| || ||  || ||  | |||||| ||||||||| || ||||||||||| ||||    
T  39838564 ttgattatgaatgaatcttttgcaacaaaagatacaataataatgatattcgactaattaaaa-agcacaactttattaattc 39838645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 4222223 - 4222165
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||| |||| |||||||||||||||||| ||| | |||||||||||    
T  4222223 cagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaata 4222165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 9557394 - 9557344
Alignment:
Q  19 atcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||| || |||||||||||||||||||| | |||||||||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactctcagatcccaagccaata 9557344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 583
Target Start/End: Original strand, 17713276 - 17713431
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||||||||||||||||| ||||| ||| ||||| ||||   ||||||| |  |||||||||||| |  ||| || || |||| |||||| |||    
T  17713276 caaaattattatttttacttagtaattagttttatatagaaatat---tttttaaattgctttgattaattatattgacaa-atatttttagagaatttt 17713371  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     ||||| ||||||| ||||| || ||||| | || ||| ||||||||| ||||| ||||||    
T  17713372 gattatgaatgaatattttgcaagaaaaagtacaagaa-aaaaacattggaatagttaaaa 17713431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 583
Target Start/End: Original strand, 19014505 - 19014660
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    |||||||||||||||||||||||| ||||| ||| ||||| ||||   ||||||| |  |||||||||||| |  ||| || || |||| |||||| |||    
T  19014505 caaaattattatttttacttagtaattagttttatatagaaatat---tttttaaattgctttgattaattatattgacaa-atatttttagagaatttt 19014600  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
     ||||| ||||||| ||||| || ||||| | || ||| ||||||||| ||||| ||||||    
T  19014601 gattatgaatgaatattttgcaagaaaaagtacaagaa-aaaaacattggaatagttaaaa 19014660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 27259243 - 27259185
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||| ||||||| |||| |||||||||||||||| ||||| |||||||||||    
T  27259243 cagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 473
Target Start/End: Complemental strand, 27541197 - 27541147
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttattt 473  Q
    ||||||||||||||||| |||||| |||||| || ||||||||||||||||    
T  27541197 caaaattattatttttatttagtaattagtaatatatagatatatttattt 27541147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 28703398 - 28703456
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||| | |||||| ||||    
T  28703398 cagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaata 28703456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 46518710 - 46518652
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||| ||||||| ||||||||||||||||||||| ||| | |||||||||||    
T  46518710 cagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaata 46518652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 11642206 - 11642247
Alignment:
Q  14 agataatcgaacctgagaccttgaggaggagcacactctcag 55  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  11642206 agataatcgaacctgagaccttgaggaggatcacaatctcag 11642247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 26482007 - 26481954
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagcca 66  Q
    |||| |||||||||| | || |||||||||||||||||||||||| ||||||||    
T  26482007 gagagaatcgaacctaaaactttgaggaggagcacactctcaggtcccaagcca 26481954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 54990777 - 54990728
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||||||||||||||||||||| |||  |||| |||||||||    
T  54990777 aatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 7741724 - 7741792
Alignment:
Q  449 tagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagaga 517  Q
    |||||||| | |||||||||| ||||||||||  ||||||||||| |  |||||||||||||| |||||    
T  7741724 tagtattatagagatatatttctttttaactcattttgattaattttgttgaaaatatgtttttagaga 7741792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 39253779 - 39253739
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||||||||||||||||||| |||||||||||||    
T  39253779 cagagagaatcgaacctgagaccttgaagaggagcacactc 39253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 40063699 - 40063643
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||| ||||||||| |||||||||| |||||||| | |||||||||||    
T  40063699 gagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaata 40063643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 51903874 - 51903930
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||  |||||||||||||||| ||| | |||||||||||    
T  51903874 gagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaata 51903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 3427548 - 3427587
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  3427548 agagagaatcgaatctgagaccttgaggaggagcacactc 3427587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 8075128 - 8075175
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    |||||||||||| ||||||||||||||||||||| || || |||||||    
T  8075128 aatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcc 8075175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 14339685 - 14339634
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||| |||||||||||||||||| ||  | |||||||||||    
T  14339685 aatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaata 14339634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 17554842 - 17554795
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||| ||||||||| |||||||||| ||||| |||||||||||    
T  17554842 gaacctgagcccttgaggaagagcacactcccaggtcccaagccaata 17554795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 31788964 - 31789023
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaataa 70  Q
    ||||||||||| ||||| | |||| |||||||||||||||| ||| | ||||||||||||    
T  31788964 cagagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaataa 31789023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 45308899 - 45308954
Alignment:
Q  14 agataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||| ||||||||||| |||| || || |||| ||||||    
T  45308899 agataatcgaacctgagacctcgaggaggagcatactcacaagtcccaaaccaata 45308954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 17765202 - 17765164
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcagg 56  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  17765202 aatcgaacctgagatcttgaggaggagcacactcccagg 17765164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 19066522 - 19066484
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcagg 56  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  19066522 aatcgaacctgagatcttgaggaggagcacactcccagg 19066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 39976433 - 39976483
Alignment:
Q  19 atcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||| |||||||||||| ||||||||||||||| || ||||| |||||    
T  39976433 atcgaacttgagaccttgagaaggagcacactctcaagtcccaagtcaata 39976483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 583
Target Start/End: Complemental strand, 47000948 - 47000835
Alignment:
Q  469 tatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaaca 568  Q
    ||||||||| || ||||||||||||||  |||||| || |||| ||| || ||| ||||| ||||||| ||||| ||||||||||  | ||||||||| |    
T  47000948 tatttttaattcgctttgattaattctattgaaaa-atatttttagataattttgattataaatgaatattttgcaacaaaaaatataagaagaaaaata 47000850  T
Q  569 ttcgaataattaaaa 583  Q
    ||  ||| |||||||    
T  47000849 tttaaatgattaaaa 47000835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 16900682 - 16900731
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||| ||||||||||| |||||||||||||  |||| |||||||||    
T  16900682 aatcgaacatgagaccttgacgaggagcacactccaaggtcccaagccaa 16900731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 17108899 - 17108932
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||| |||||||||||||||||||||||||||||    
T  17108899 aatcaaacctgagaccttgaggaggagcacactc 17108932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 17554532 - 17554491
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctca 54  Q
    ||||||||| ||||||||||||||| |||||||| |||||||    
T  17554532 gagataatccaacctgagaccttgaagaggagcagactctca 17554491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 19716272 - 19716239
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||| ||||||||||||||||||||||||    
T  19716272 aatcgaaccagagaccttgaggaggagcacactc 19716239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 583
Target Start/End: Original strand, 33290758 - 33290858
Alignment:
Q  482 ctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaa 581  Q
    |||||||||||| ||||  || ||| |||| |||||||||| || || |||||||||| || ||||||||| ||| | ||||||| |||  |||||||||    
T  33290758 ctttgattaatt-ttattgaattatatttttagagaactttgatcataaatgaatcttgtgcaacaaaaaacgcaaggagaaaaatattgaaataattaa 33290856  T
Q  582 aa 583  Q
    ||    
T  33290857 aa 33290858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 33899689 - 33899656
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||| ||||||||||||||||    
T  33899689 aatcgaacctgagacctagaggaggagcacactc 33899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 34622535 - 34622568
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggag 44  Q
    |||||| |||||||||||||||||||||||||||    
T  34622535 cagagaaaatcgaacctgagaccttgaggaggag 34622568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 36720462 - 36720405
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| |||||||||||| |||| |||||||||||||||| ||  | |||||||||||    
T  36720462 agagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaata 36720405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 44069833 - 44069800
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||| |||||||||||||||||||||||||||||    
T  44069833 aatcaaacctgagaccttgaggaggagcacactc 44069800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 47454618 - 47454651
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||| ||||||||||||||||    
T  47454618 aatcgaacctgagacctcgaggaggagcacactc 47454651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 48583449 - 48583490
Alignment:
Q  16 ataatcgaacctgagaccttgaggaggagcacactctcaggt 57  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||    
T  48583449 ataatcgaatctgagactttgaggaggaggacactctcaggt 48583490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 49452944 - 49452915
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||||||||||||||    
T  49452944 gaacctgagaccttgaggaggagcacactc 49452915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4844507 - 4844563
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||| |||||||||| |||||||||||||||| ||| | ||||| |||||    
T  4844507 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaata 4844563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4870203 - 4870259
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||| |||||||||| |||||||||||||||| ||| | ||||| |||||    
T  4870203 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaata 4870259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 8796087 - 8796127
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||||||| |||||||||||||||||||| ||||    
T  8796087 cagagagaatcgaacttgagaccttgaggaggagcatactc 8796127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 11612373 - 11612341
Alignment:
Q  19 atcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||| |||||||||||||||    
T  11612373 atcgaacctgagaccttaaggaggagcacactc 11612341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 18258015 - 18257971
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatat 467  Q
    |||| |||||||||||||||| |||||||||||| ||| ||||||    
T  18258015 caaatttattatttttacttaatagttagtattatatacatatat 18257971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 24353384 - 24353412
Alignment:
Q  22 gaacctgagaccttgaggaggagcacact 50  Q
    |||||||||||||||||||||||||||||    
T  24353384 gaacctgagaccttgaggaggagcacact 24353412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 25035780 - 25035732
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcca 66  Q
    |||||||||||| | || ||||||||||||| |||||||| ||||||||    
T  25035780 aatcgaacctgaaatctcgaggaggagcacattctcaggtcccaagcca 25035732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 32320509 - 32320541
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacact 50  Q
    |||||||| ||||||||||||||||||||||||    
T  32320509 aatcgaacatgagaccttgaggaggagcacact 32320541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 32639025 - 32638969
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||| || || || ||||||| ||| |||||||||||||    
T  32639025 gagaaaatcgaacctgagacctcgaagatgaacacactcccagtttccaagccaata 32638969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 36010824 - 36010784
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||||||| |||||| ||||||||||||||||||    
T  36010824 cagagagaatcgaacttgagactttgaggaggagcacactc 36010784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 42417929 - 42417977
Alignment:
Q  426 aattattatttttacttagtagttagtattaaatagatatatttatttt 474  Q
    ||||||||||||||||||||||||| || || ||| |||||||| ||||    
T  42417929 aattattatttttacttagtagttaatactatataaatatatttgtttt 42417977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 8e-29; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 372 - 565
Target Start/End: Original strand, 5163741 - 5163934
Alignment:
Q  372 gagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatatttat 471  Q
    |||||| ||||||||| ||| || || ||||||| ||| | | | ||| | ||||||||||||||||||||||||||||||| || ||| |||||| | |    
T  5163741 gagggtgggcgggagggacgacagcctagggcactattattttaggggcatcaaaattattatttttacttagtagttagtactatataaatatatatct 5163840  T
Q  472 ttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaa 565  Q
    |||||| ||  ||||||||||| |  ||| |||||  ||| ||| |||||| ||||| ||||||||||||||||||||||||| | ||||||||    
T  5163841 ttttaattcggtttgattaattatattgagaatattattttagaaaactttgattataaatgaatcttttgtaacaaaaaatgtaagaagaaaa 5163934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 583
Target Start/End: Complemental strand, 36186700 - 36186579
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||||| ||||||| || |||||||||||| |  ||||||||| |||| |||||||||| ||||| ||| ||||||||| ||||||||||| | ||||    
T  36186700 atatatttctttttaattctctttgattaattatattgaaaatatatttttagagaactttgattataaataaatcttttgcaacaaaaaatgtatgaag 36186601  T
Q  562 aaaaacattcgaataattaaaa 583  Q
    ||||||||| ||||||||||||    
T  36186600 aaaaacattagaataattaaaa 36186579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 393 - 556
Target Start/End: Complemental strand, 30257940 - 30257776
Alignment:
Q  393 caacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaa-atagatatatttatttttaactccctttgattaa 491  Q
    ||||||||||||||||| | | || || | |||||||||| |||||||||| |||||| || ||| |||||||||||| |||| || ||  |||||||||    
T  30257940 caacccagggcaccattattttaaaggcatcaaaattattttttttacttaatagttaatactaatatagatatatttcttttcaattcggtttgattaa 30257841  T
Q  492 ttcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgca 556  Q
    || |  ||||||||| |||| |||||||||| ||||| ||| ||||||||| |||||||||||||    
T  30257840 ttatattgaaaatatatttttagagaactttgattataaataaatcttttgaaacaaaaaatgca 30257776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 421 - 541
Target Start/End: Complemental strand, 40877056 - 40876936
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||   || ||||||||||  ||||||||| |||| | |||||     
T  40877056 accaaaattattatttttacttggtagttagtattatataaatatatttctttttaacttgtttggattaattctattgaaaatatatttttatagaacc 40876957  T
Q  521 tttattatcaatgaatctttt 541  Q
    || ||||| | ||||||||||    
T  40876956 ttgattatgagtgaatctttt 40876936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 604
Target Start/End: Original strand, 15925443 - 15925661
Alignment:
Q  389 acggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagta--gttagtattaaatagatatatttatttttaactccctttg 486  Q
    |||||||||||  |||||||||| ||| ||| | |||||||||||||||||||| |||  || ||||||  |||||||||||| |||||||||| ||||     
T  15925443 acggcaacccaaagcaccattttttaaggggtatcaaaattattatttttactttgtattgtaagtattgtatagatatatttctttttaactcgcttta 15925542  T
Q  487 attaattcttatg---aaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    ||||||| |  ||   ||||||| |||  ||| |||||| || ||  ||||||||||||||||||||||| ||  | |||| || ||| |||||||||||    
T  15925543 attaattatattgaaaaaaatatatttctagaaaactttaataat-gatgaatcttttgtaacaaaaaatacaaaaggaaagacgttcaaataattaaaa 15925641  T
Q  584 tagtacaactttattgattcg 604  Q
     || ||||||| |||||||||    
T  15925642 -agcacaacttcattgattcg 15925661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 424 - 621
Target Start/End: Complemental strand, 36507000 - 36506809
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttt 523  Q
    ||||| |||||||||| |||||||||||||||| ||||| |||||| |||||||||| |||||||| |||||  |||||||| ||||| ||| |||        
T  36507000 aaaatcattatttttaattagtagttagtattatatagaaatatttgtttttaactctctttgattgattctattgaaaatacgtttttagaaaac---- 36506905  T
Q  524 attatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaat 621  Q
      ||| || |||||||||  |||  |||||||| ||| ||| ||||| |||| |||||||  ||||| ||||||||||||| ||| | ||| ||||||    
T  36506904 -ctatgaacgaatcttttccaac-gaaaatgcaagaaaaaagacatttgaatgattaaaaacgtacatctttattgattcgtctagggcaccaaaaat 36506809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 456 - 583
Target Start/End: Complemental strand, 16647055 - 16646928
Alignment:
Q  456 aaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgc 555  Q
    |||||||||||||| ||||||| |   |||||||||||||  ||||||||| |||| |||||| ||| ||||| |||||||||| || ||||||||||      
T  16647055 aaatagatatatttctttttaatttgttttgattaattctattgaaaatatctttttagagaattttaattataaatgaatcttgtgcaacaaaaaataa 16646956  T
Q  556 acgaagaaaaacattcgaataattaaaa 583  Q
    | ||||||||| |||  |||||||||||    
T  16646955 aagaagaaaaatattaaaataattaaaa 16646928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 37480150 - 37480099
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37480150 aatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaata 37480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 584
Target Start/End: Original strand, 38561844 - 38562002
Alignment:
Q  425 aaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaactttta 524  Q
    ||||||||||||||| |||||||||| ||  | ||||||| |||| ||||||| |   |||||||||||| | ||||||||| |||| |||||||||| |    
T  38561844 aaattattatttttatttagtagttattacaatatagatacatttctttttaatttgttttgattaattcat-tgaaaatatttttttagagaactttca 38561942  T
Q  525 ttatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaat 584  Q
    |||| ||||||| || || |||||||||| ||  |||||||| ||| ||| | |||||||    
T  38561943 ttataaatgaatattgtgcaacaaaaaatacaaaaagaaaaatattagaacagttaaaat 38562002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 42327396 - 42327447
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  42327396 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 42327447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 42922497 - 42922438
Alignment:
Q  11 cagagataatcgaacctgagacctt-gaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  42922497 cagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaata 42922438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 361 - 599
Target Start/End: Complemental strand, 2887218 - 2886978
Alignment:
Q  361 agggtggctctgagggtaggcgggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagt-attaaa- 458  Q
    |||||||| |||||||| || ||||||  |||||| | ||||||||||| | | | ||| ||||||||||||||||| | ||| || ||||| ||||       
T  2887218 agggtggccctgagggtgggtgggaggggcggcaatctagggcaccattattttaggggtaccaaaattattattttaa-ttactaattagtgattagtg 2887120  T
Q  459 -tagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcac 557  Q
     || ||| |||| ||||||| ||  |||||||||||||  | |||| || |||| |||||||||| ||||| ||| |||| | |  |||||||||||||     
T  2887119 ctatatagatttttttttaattcgttttgattaattctattaaaaaaatatttttagagaactttgattataaataaatcatctacaacaaaaaatgcaa 2887020  T
Q  558 gaagaaaaacattcgaataattaaaatagtacaactttattg 599  Q
    ||||||||  ||| ||||||||||||  |||||| |||||||    
T  2887019 gaagaaaagtattagaataattaaaaaggtacaattttattg 2886978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 19244191 - 19244133
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  19244191 cagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaata 19244133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4262298 - 4262354
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 13803577 - 13803537
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13803577 cagagataatcgaacctgagaccttgaggaggagcacactc 13803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 21195677 - 21195724
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcc 65  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||    
T  21195677 aatcgaacctgagaccttgaggaggagcacactcccaagttccaagcc 21195724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 28556734 - 28556603
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||  ||| || ||  ||||||||||| |  | ||||||| |||| | ||||||||    
T  28556734 caaaattattatttttacttagtagttagtactatatagatacatttcgtttaaattcggtttgattaattatattaaaaatatatttttaaagaacttt 28556635  T
Q  523 tattatcaatgaatcttttgtaacaaaaaatg 554  Q
     || || || |||||||| | || ||||||||    
T  28556634 gatgataaacgaatctttggaaataaaaaatg 28556603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 29503346 - 29503295
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| ||||||    
T  29503346 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaata 29503295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 4060208 - 4060266
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||| ||| ||||||    
T  4060208 cagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaata 4060266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 434 - 583
Target Start/End: Original strand, 38134084 - 38134230
Alignment:
Q  434 tttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatg 533  Q
    |||||||||||||||||||| || ||| ||||  || ||||||||||  ||||||||||| |  | ||||||| ||||| |||||| ||  |||  ||||    
T  38134084 tttttacttagtagttagtagtacataaatat--ttctttttaactcgatttgattaattatattaaaaatatttttta-gagaaccttatttacgaatg 38134180  T
Q  534 aatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    ||||||||| ||||||||||| | ||| ||| ||||| |||||| |||||    
T  38134181 aatcttttgcaacaaaaaatgtaagaaaaaagacatttgaataactaaaa 38134230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 40416384 - 40416442
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||||||||||||| |||||||||| |||| ||||||||||| |||||    
T  40416384 cagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaata 40416442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 11062441 - 11062384
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| |||| ||||||||||||||||||| ||||||||| || ||||||||||||||    
T  11062441 agagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaata 11062384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 539
Target Start/End: Complemental strand, 17271424 - 17271273
Alignment:
Q  391 ggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatattta---tttttaactccctttga 487  Q
    |||| |||||||| | ||||| | | ||| |||||||||||||||||||||||||||| ||||| | |||||||||| ||   ||||| | |   |||||    
T  17271424 ggcagcccagggcgctatttttttaggggtaccaaaattattatttttacttagtagtcagtataatatagatatatatatattttttcatttgttttga 17271325  T
Q  488 ttaattcttatgaaaatatgttttaagagaacttttattatcaatgaatctt 539  Q
    |||||| |  ||||||||| |||| ||  |||||| ||||| ||||||||||    
T  17271324 ttaattatattgaaaatatatttttagcaaactttgattataaatgaatctt 17271273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 606
Target Start/End: Original strand, 18197338 - 18197520
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttt 522  Q
    ||||||||||||||||||||  ||||||||||| | || |||||||| ||||||||||  |||| |||| |||  ||||||||| ||||     || | |    
T  18197338 caaaattattatttttacttgatagttagtatt-attacatatatttctttttaactcgttttggttaagtctactgaaaatatttttttcacaaaatct 18197436  T
Q  523 tat-tatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagt-acaactttattgattcgcc 606  Q
    ||| ||| ||||||| ||||||||| ||||||| | ||||||| ||||| ||| |||||||| ||| ||||||||||| |||||||    
T  18197437 tatctattaatgaatgttttgtaac-aaaaatgtaagaagaaacacatttgaaaaattaaaa-agtcacaactttattaattcgcc 18197520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 12086130 - 12086181
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||||||||||    
T  12086130 aatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaata 12086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 426 - 552
Target Start/End: Complemental strand, 18830100 - 18829973
Alignment:
Q  426 aattattatttttacttagtagttagtattaaatagatatattt-atttttaactccctttgattaattcttatgaaaatatgttttaagagaactttta 524  Q
    |||||||||||||||||||| | ||||| || ||||||||||||  ||||||||   || ||||||||| |  ||||||||| |||| |||||||  | |    
T  18830100 aattattatttttacttagtgggtagtactatatagatatatttcttttttaacatgctatgattaattttattgaaaatatatttttagagaacaatga 18830001  T
Q  525 ttatcaatgaatcttttgtaacaaaaaa 552  Q
    |||| ||||||| ||||| || ||||||    
T  18830000 ttatgaatgaattttttgcaaaaaaaaa 18829973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 23052524 - 23052575
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||||| ||||||||| || || |||||||||||    
T  23052524 aatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaata 23052575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 39715067 - 39715016
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||| |||||    
T  39715067 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaata 39715016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 11251169 - 11251111
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||| ||||||||||||||||||||||||||||  || || |||||||||||    
T  11251169 cagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaata 11251111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 28846769 - 28846715
Alignment:
Q  15 gataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||| | |||||||||||||||| ||||| ||||| |||||    
T  28846769 gataatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaata 28846715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 30410543 - 30410601
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||||||| |||| ||||||||||||||||||||  |||| |||||||||||    
T  30410543 cagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaata 30410601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 33582054 - 33582004
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaa 62  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||| ||||    
T  33582054 agagagaatcgaacctgagacctcaaggaggagcacactctcaggtcccaa 33582004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 603
Target Start/End: Complemental strand, 38608400 - 38608294
Alignment:
Q  498 tgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatag-tacaacttta 596  Q
    ||||||||| |||| | ||||| || ||||| ||| |||| |||| |||||||||| || ||| ||| ||||| |||||||||||| || ||||| ||||    
T  38608400 tgaaaatatatttttaaagaaccttaattatgaatcaatcatttgcaacaaaaaatacaggaataaacacatttgaataattaaaagagatacaatttta 38608301  T
Q  597 ttgattc 603  Q
    |||||||    
T  38608300 ttgattc 38608294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 34041589 - 34041626
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcag 55  Q
    |||| |||||||||||||||||||||||||||||||||    
T  34041589 aatcaaacctgagaccttgaggaggagcacactctcag 34041626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 583
Target Start/End: Original strand, 37912332 - 37912453
Alignment:
Q  462 atatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaag 561  Q
    |||||| | ||||||| || |||||||| |||||  ||||||||| ||||  |  |||||| ||||| ||||||| ||||| |||||| |||| | | ||    
T  37912332 atatatatctttttaattcgctttgatttattctcttgaaaatatatttttgggtaactttgattataaatgaatattttgcaacaaacaatgtaaggag 37912431  T
Q  562 aaaaacattcgaataattaaaa 583  Q
    ||||| ||| ||||||||||||    
T  37912432 aaaaatatttgaataattaaaa 37912453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 11738038 - 11738082
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcag 55  Q
    ||||||||||||||||||| || |||||||||| |||||||||||    
T  11738038 cagagataatcgaacctgaaactttgaggaggaacacactctcag 11738082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 17737622 - 17737658
Alignment:
Q  15 gataatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17737622 gataatcgaacatgagaccttgaggaggagcacactc 17737658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 28226877 - 28226833
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatat 465  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||    
T  28226877 accaaaattattatttttatttagtagttaatattatatagatat 28226833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 41908636 - 41908672
Alignment:
Q  15 gataatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  41908636 gataatcgaacttgagaccttgaggaggagcacactc 41908672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 42602634 - 42602578
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||| ||||| |||||||||| |||||||||||| ||||| |||||||||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaata 42602578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 12994377 - 12994428
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||| ||||||||| ||||||||||||||| ||||| ||||| |||||    
T  12994377 aatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaata 12994428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 21213844 - 21213793
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||  ||||||| ||||||| ||||| |||||||||||    
T  21213844 aatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaata 21213793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 30808648 - 30808699
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||| ||||||||||||||||||||| | ||||||||  ||||||||||    
T  30808648 aatcgaaactgagaccttgaggaggagcatattctcaggtctcaagccaata 30808699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 479
Target Start/End: Complemental strand, 38035445 - 38035390
Alignment:
Q  424 aaaattattatttttacttagtagttagtattaaatagatatatttatttttaact 479  Q
    |||||||||||||||||| | |||||||||||||||  |||||||| |||| ||||    
T  38035445 aaaattattatttttactcattagttagtattaaattaatatatttcttttaaact 38035390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 42420344 - 42420293
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||| |||||||||||| | |||||||||||||||| | |||||||||    
T  42420344 aatcgaacatgagaccttgagtaagagcacactctcaggtcctaagccaata 42420293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 467
Target Start/End: Complemental strand, 4206693 - 4206647
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatat 467  Q
    |||||||||||||| |||||||||||||||||| || ||| ||||||    
T  4206693 accaaaattattatatttacttagtagttagtaatatatatatatat 4206647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 4226144 - 4226086
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||| |||||||||||||| | | |||||  ||||||| |||||    
T  4226144 cagagataatcgaacctgaaaccttgaggaggagtatattctcaaattccaagtcaata 4226086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 493
Target Start/End: Original strand, 6621319 - 6621389
Alignment:
Q  423 caaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaatt 493  Q
    ||||||||||||||| | || ||||||| ||  | ||  |||||||| |||||||||||||||||||||||    
T  6621319 caaaattattattttcatttggtagttaatagcatatgcatatatttctttttaactccctttgattaatt 6621389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 16647996 - 16647942
Alignment:
Q  390 cggcaacccagggcaccattttataaagggaaccaaaattattatttttacttag 444  Q
    |||||||||||||||||||||| | | ||| | ||||||||||||||||| ||||    
T  16647996 cggcaacccagggcaccatttttttaggggcatcaaaattattatttttatttag 16647942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 16918572 - 16918630
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||| | |||| ||||||    
T  16918572 cagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaata 16918630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 451
Target Start/End: Original strand, 34345892 - 34345926
Alignment:
Q  417 gggaaccaaaattattatttttacttagtagttag 451  Q
    ||||| |||||||||||||||||||||||||||||    
T  34345892 gggaatcaaaattattatttttacttagtagttag 34345926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 564
Target Start/End: Complemental strand, 35281055 - 35280919
Alignment:
Q  430 attatttttacttagtagttagtattaaatagat--atatt-tatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttatt 526  Q
    |||||||||||||| |||||||||||  ||||||  ||||| | |||||||||   |||||||||||||  ||||||||| |||| | | || | | |||    
T  35281055 attatttttacttaatagttagtattgtatagatacatattatttttttaacttgatttgattaattctattgaaaatatatttttaaataattatcatt 35280956  T
Q  527 atcaatgaatcttttgtaacaaaaaatgcacgaagaaa 564  Q
    || |||||||||||| | | |||||||||| |||||||    
T  35280955 atgaatgaatctttt-tcataaaaaatgcaagaagaaa 35280919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 38854460 - 38854502
Alignment:
Q  15 gataatcgaacctgagaccttgaggaggagcacactctcaggt 57  Q
    |||||||||||||||||||||||||||  | ||||||||||||    
T  38854460 gataatcgaacctgagaccttgaggagaggtacactctcaggt 38854502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 620
Target Start/End: Complemental strand, 40705935 - 40705853
Alignment:
Q  538 ttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaatagtacaactttattgattcgcctaagacactaaaaa 620  Q
    |||||||| |||||||||| ||||||| |||||| |||||||||||  |  || ||||||||||||  ||| ||||| |||||    
T  40705935 ttttgtaataaaaaatgcaagaagaaagacattcaaataattaaaagggcgcatctttattgattcatctaggacacaaaaaa 40705853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 4438980 - 4439017
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcag 55  Q
    |||||||| || ||||||||||||||||||||||||||    
T  4438980 aatcgaacatgcgaccttgaggaggagcacactctcag 4439017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 6099520 - 6099568
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||||||||||| |||||||||||||  |||| |||||||||    
T  6099520 aatcgaacctgagaccttga-gaggagcacactccaaggtcccaagccaa 6099568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 19322849 - 19322792
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| |||| |||| |||||||||| ||||||||||||| ||||| |||| ||||||    
T  19322849 agagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaata 19322792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 21939124 - 21939173
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||||| || ||||||||||||||||||| || | |||||||    
T  21939124 aatcgaacctgagatctcgaggaggagcacactctcaagtccaaagccaa 21939173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 50
Target Start/End: Complemental strand, 26276427 - 26276398
Alignment:
Q  21 cgaacctgagaccttgaggaggagcacact 50  Q
    ||||||||||||||||||||||||||||||    
T  26276427 cgaacctgagaccttgaggaggagcacact 26276398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 553
Target Start/End: Complemental strand, 26350528 - 26350440
Alignment:
Q  464 atatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaat 553  Q
    ||||||||||| ||||| |||||||||||| |  ||||||||| |||||| | ||||||  |||| ||||||| ||||| | ||||||||    
T  26350528 atatttattttaaactcgctttgattaattttattgaaaatattttttaa-aaaactttatttatgaatgaattttttgcagcaaaaaat 26350440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 26482167 - 26482119
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||||||||||| |||||||||||||  |||| |||||||||    
T  26482167 aatcgaacctgagaccttga-gaggagcacactcctaggtcccaagccaa 26482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 33839265 - 33839294
Alignment:
Q  22 gaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||||||||||||||    
T  33839265 gaacctgagaccttgaggaggagcacactc 33839294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 467
Target Start/End: Complemental strand, 34909509 - 34909424
Alignment:
Q  382 gggaggaacggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagttagtattaaatagatatat 467  Q
    |||||| |||||| ||||||| |||||| | | | ||| |  |||||||||||||||||||| ||||||||| || ||| ||||||    
T  34909509 gggagggacggcagcccagggtaccattattttaggggcattaaaattattatttttacttactagttagtaatatatatatatat 34909424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 38856159 - 38856212
Alignment:
Q  14 agataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||| |||||||||||||||  | ||||||||||||  ||||||||    
T  38856159 agataatcgaacatgagaccttgaggagaggtacactctcaggtctcaagccaa 38856212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 3001461 - 3001421
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||||| ||  |||||||||||||||    
T  3001461 cagagataatcgaacctgagatctcaaggaggagcacactc 3001421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3661004 - 3661048
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggt 57  Q
    |||| |||||||||||||| || ||||||| ||||||||||||||    
T  3661004 gagagaatcgaacctgagatctcgaggaggggcacactctcaggt 3661048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 566
Target Start/End: Complemental strand, 4206409 - 4206325
Alignment:
Q  482 ctttgattaattcttatgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaa 566  Q
    ||||||||||||||  | |||| ||  ||| ||| |||||| ||||| ||||||| ||||| ||||||||||||| ||| |||||    
T  4206409 ctttgattaattctatttaaaaaatacttttagataactttaattataaatgaatattttgcaacaaaaaatgcaagaaaaaaaa 4206325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 7799031 - 7799087
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||| |||||| || |||||||||||||||| || || |||||||||||    
T  7799031 gagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaata 7799087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 12497777 - 12497813
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcaca 48  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  12497777 agagagaatcgaatctgagaccttgaggaggagcaca 12497813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 14500359 - 14500319
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| ||||||| ||||||||| ||||||||||||||||    
T  14500359 cagagagaatcgaatctgagacctagaggaggagcacactc 14500319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 24191894 - 24191862
Alignment:
Q  37 aggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||||||||| |||||||||||    
T  24191894 aggaggagcacactctcaggtcccaagccaata 24191862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 30359720 - 30359680
Alignment:
Q  27 tgagaccttgaggaggagcacactctcaggttccaagccaa 67  Q
    |||||||||||||||||||||||||  |||| |||||||||    
T  30359720 tgagaccttgaggaggagcacactccaaggtcccaagccaa 30359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 32687556 - 32687520
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctca 54  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  32687556 aatcgaacctgagacctcgaggaggaacacactctca 32687520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 35203380 - 35203420
Alignment:
Q  14 agataatcgaacctgagaccttgaggaggagcacactctca 54  Q
    |||||||||||| |||||| ||||||| |||||||||||||    
T  35203380 agataatcgaacatgagactttgaggatgagcacactctca 35203420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 450
Target Start/End: Original strand, 37911399 - 37911459
Alignment:
Q  390 cggcaacccagggcaccattttataaagggaaccaaaattattatttttacttagtagtta 450  Q
    ||||| |||||| ||||||||  | | ||| |||||||||||||||||| |||||||||||    
T  37911399 cggcagcccaggacaccatttatttaggggcaccaaaattattatttttgcttagtagtta 37911459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 40791491 - 40791527
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctca 54  Q
    |||||||| |||||||||||| |||||||||||||||    
T  40791491 aatcgaacttgagaccttgagaaggagcacactctca 40791527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45026825 - 45026785
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| |||| ||| |||||||||||||||||||||||||    
T  45026825 cagagagaatcaaacatgagaccttgaggaggagcacactc 45026785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 421 - 583
Target Start/End: Original strand, 5844 - 6005
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    ||||||||||||||||||| | ||||||||||| || |||||||||||| ||| ||| |  |||||||||||| |  |||||||||||||| | |||| |    
T  5844 accaaaattattattttta-tgagtagttagtactacatagatatatttctttctaaattgctttgattaattatattgaaaatatgtttttaaagaatt 5942  T
Q  521 tttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    || ||||| ||||||| ||||| || ||||||| || ||||||| |||||| |||||||||||    
T  5943 ttgattatgaatgaattttttgcaataaaaaatacatgaagaaagacattcaaataattaaaa 6005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 94965 - 95023
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  94965 cagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaata 95023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 9699 - 9813
Alignment:
Q  421 accaaaattattatttttacttagtagttagtattaaatagatatatttatttttaactccctttgattaattcttatgaaaatatgttttaagagaact 520  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||| | ||||||| ||  ||||||||||| |  ||| ||||| |||| ||| ||||    
T  9699 accaaaattattatttttatttagtagttagtactatatagatatatatctttttaattcggtttgattaattatattgagaatatatttttagaaaact 9798  T
Q  521 tttattatcaatgaa 535  Q
    || ||||| ||||||    
T  9799 ttgattataaatgaa 9813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 19956 - 20014
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  19956 cagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaata 20014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 15319 - 15375
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaata 15375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 11610 - 11552
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||||||||||||||||| |||||||||||||||| ||| | |||||||||||    
T  11610 cagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaata 11552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 25341 - 25399
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||  ||||||||||    
T  25341 cagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaata 25399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 583
Target Start/End: Original strand, 1720 - 1805
Alignment:
Q  498 tgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    ||||||||| |||| |||||||||| ||||| ||| ||||||||| || |||||||| | ||||||||| |||  |||||||||||    
T  1720 tgaaaatatatttttagagaactttgattataaataaatcttttgcaataaaaaatgaaagaagaaaaatattgaaataattaaaa 1805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 583
Target Start/End: Original strand, 9783 - 9868
Alignment:
Q  498 tgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaaa 583  Q
    ||||||||| |||| |||||||||| ||||| ||| ||||||||| || |||||||| | ||||||||| |||  |||||||||||    
T  9783 tgaaaatatatttttagagaactttgattataaataaatcttttgcaataaaaaatgaaagaagaaaaatattgaaataattaaaa 9868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 13042 - 13098
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||||||||||||||||||||||||||||| ||| |  ||||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaata 13098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 35383 - 35441
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||||||||||| | |||||||||||||||||| ||||  || |||||||||||||    
T  35383 cagagataatcgaacttaagaccttgaggaggagcatactcctagattccaagccaata 35441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 2471 - 2504
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactc 51  Q
    ||||||||||||||||||||||||||||||||||    
T  2471 aatcgaacctgagaccttgaggaggagcacactc 2504  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 18381 - 18324
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaat 68  Q
    |||||| |||| ||||||| |||||||||||||||||| || ||| ||||||||||||    
T  18381 cagagagaatcaaacctgaaaccttgaggaggagcacaatcccagattccaagccaat 18324  T

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Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 163005 - 163049
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggt 57  Q
    |||| |||||||||| |||||||  ||||||||||||||||||||    
T  163005 gagagaatcgaacctcagaccttatggaggagcacactctcaggt 163049  T

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Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 222584 - 222536
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagcca 66  Q
    |||| ||||||| ||||||||||||| |||| |||||| ||||||||||    
T  222584 aatcaaacctgaaaccttgaggaggaacacaatctcagattccaagcca 222536  T

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Target: scaffold0238 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 2705 - 2745
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactc 51  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  2705 cagagagaatcgaacctgagaccttgaggaggagcagactc 2745  T

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Target: scaffold0517 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 7727 - 7778
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||| ||||||||| |||||||||||||| ||||||  ||||||||||    
T  7727 aatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaata 7778  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 81565 - 81616
Alignment:
Q  18 aatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||||| |||||||||||||||||||||||||  ||| |||||| ||||||    
T  81565 aatcgaatctgagaccttgaggaggagcacacttccagattccaaaccaata 81616  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 6921 - 6971
Alignment:
Q  19 atcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||||||||||| |||||||||||||||||| |  || |||||||||||    
T  6921 atcgaacctgagactttgaggaggagcacactccccagtcccaagccaata 6971  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 41627 - 41685
Alignment:
Q  11 cagagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||||| ||| ||||||||||||| ||||||||||| |||||||| |  ||||||||||    
T  41627 cagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaata 41685  T

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Target: scaffold1367 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 835 - 892
Alignment:
Q  12 agagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    ||||| ||||||||||||||| | ||||||||||||| || ||| | |||||||||||    
T  835 agagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaata 892  T

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Target: scaffold1173 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1173
Description:

Target: scaffold1173; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 582
Target Start/End: Original strand, 403 - 487
Alignment:
Q  498 tgaaaatatgttttaagagaacttttattatcaatgaatcttttgtaacaaaaaatgcacgaagaaaaacattcgaataattaaa 582  Q
    |||||| || |||| ||| |||||| ||||| ||| ||| ||||  || |||||||||| ||||||||| ||| |||||||||||    
T  403 tgaaaaaatatttttagataactttgattataaattaatattttacaataaaaaatgcaagaagaaaaatatttgaataattaaa 487  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 49386 - 49330
Alignment:
Q  13 gagataatcgaacctgagaccttgaggaggagcacactctcaggttccaagccaata 69  Q
    |||| |||||||||||| |||| || ||||||||||||||||  | |||||||||||    
T  49386 gagagaatcgaacctgatacctcgaagaggagcacactctcaaatcccaagccaata 49330  T

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