View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5097-Insertion-1 (Length: 696)

Name: NF5097-Insertion-1
Description: NF5097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5097-Insertion-1
NF5097-Insertion-1
[»] chr4 (58 HSPs)
chr4 (297-578)||(879692-879973)
chr4 (8-214)||(879045-879251)
chr4 (581-696)||(879950-880065)
chr4 (297-362)||(34361635-34361700)
chr4 (297-362)||(25184115-25184180)
chr4 (297-362)||(32912724-32912789)
chr4 (297-362)||(55478039-55478104)
chr4 (300-364)||(47253749-47253813)
chr4 (314-365)||(27396615-27396666)
chr4 (297-362)||(19440792-19440858)
chr4 (300-362)||(28003133-28003195)
chr4 (300-362)||(38011856-38011918)
chr4 (300-362)||(39397920-39397982)
chr4 (306-364)||(52516597-52516655)
chr4 (297-362)||(4396328-4396393)
chr4 (297-362)||(35021179-35021244)
chr4 (319-363)||(20097494-20097538)
chr4 (298-362)||(50697244-50697308)
chr4 (298-361)||(6864038-6864101)
chr4 (319-362)||(38812263-38812306)
chr4 (300-362)||(7703519-7703581)
chr4 (300-362)||(17272013-17272075)
chr4 (300-362)||(29584345-29584407)
chr4 (300-362)||(34948244-34948306)
chr4 (298-364)||(36493833-36493899)
chr4 (297-362)||(3042613-3042678)
chr4 (305-362)||(4597995-4598052)
chr4 (313-362)||(37663899-37663948)
chr4 (297-362)||(46884178-46884243)
chr4 (298-362)||(9139249-9139313)
chr4 (300-362)||(37287735-37287798)
chr4 (319-362)||(38811815-38811858)
chr4 (319-362)||(47073660-47073703)
chr4 (319-362)||(55241270-55241313)
chr4 (308-362)||(19089608-19089662)
chr4 (300-362)||(25701204-25701266)
chr4 (297-367)||(42199726-42199796)
chr4 (297-362)||(4205118-4205183)
chr4 (319-364)||(33255499-33255544)
chr4 (314-362)||(49375968-49376017)
chr4 (300-364)||(33341395-33341459)
chr4 (298-362)||(53124289-53124353)
chr4 (319-362)||(2704514-2704557)
chr4 (319-362)||(28293240-28293283)
chr4 (319-362)||(49878638-49878680)
chr4 (319-362)||(51204581-51204624)
chr4 (319-362)||(54995802-54995845)
chr4 (319-365)||(2266859-2266905)
chr4 (300-362)||(7152253-7152315)
chr4 (327-361)||(17612338-17612372)
chr4 (300-362)||(32579446-32579508)
chr4 (300-362)||(35025735-35025797)
chr4 (297-371)||(37775663-37775736)
chr4 (319-369)||(47236859-47236909)
chr4 (321-362)||(9743590-9743631)
chr4 (249-292)||(879292-879333)
chr4 (300-364)||(5048112-5048176)
chr4 (314-366)||(33816694-33816746)
[»] chr1 (43 HSPs)
chr1 (298-364)||(15752025-15752091)
chr1 (297-362)||(1547285-1547350)
chr1 (297-362)||(10922725-10922790)
chr1 (298-371)||(18422640-18422713)
chr1 (298-362)||(10182122-10182186)
chr1 (298-362)||(37619010-37619074)
chr1 (297-368)||(30254850-30254921)
chr1 (297-362)||(27227592-27227655)
chr1 (297-362)||(19899882-19899947)
chr1 (298-362)||(23999345-23999409)
chr1 (297-368)||(30254416-30254487)
chr1 (319-362)||(47279161-47279204)
chr1 (300-362)||(2959746-2959808)
chr1 (300-362)||(3309146-3309208)
chr1 (300-362)||(14758039-14758101)
chr1 (300-362)||(16415643-16415705)
chr1 (300-362)||(38823212-38823274)
chr1 (297-362)||(47682608-47682671)
chr1 (297-362)||(15382931-15382996)
chr1 (305-362)||(31621674-31621731)
chr1 (297-362)||(32267032-32267097)
chr1 (302-362)||(21289663-21289723)
chr1 (298-366)||(41926157-41926225)
chr1 (298-362)||(42721037-42721101)
chr1 (319-362)||(4150490-4150533)
chr1 (297-364)||(28769649-28769716)
chr1 (291-354)||(37451292-37451355)
chr1 (319-362)||(43579244-43579287)
chr1 (308-362)||(7079198-7079252)
chr1 (319-361)||(42663788-42663830)
chr1 (297-362)||(8222129-8222194)
chr1 (297-362)||(30327065-30327130)
chr1 (305-362)||(34012498-34012555)
chr1 (313-365)||(238641-238693)
chr1 (319-367)||(16132472-16132520)
chr1 (319-362)||(13876922-13876965)
chr1 (319-362)||(26970263-26970306)
chr1 (297-351)||(27267312-27267364)
chr1 (314-353)||(47279196-47279235)
chr1 (300-362)||(22170752-22170814)
chr1 (313-362)||(11742479-11742528)
chr1 (319-364)||(33725735-33725780)
chr1 (297-364)||(46931404-46931474)
[»] chr8 (40 HSPs)
chr8 (297-362)||(10555326-10555391)
chr8 (298-364)||(7891073-7891139)
chr8 (297-362)||(23854555-23854620)
chr8 (297-358)||(37970643-37970704)
chr8 (297-362)||(43643719-43643784)
chr8 (297-369)||(1150229-1150301)
chr8 (299-362)||(15009243-15009306)
chr8 (297-362)||(1204928-1204993)
chr8 (300-362)||(13307624-13307686)
chr8 (297-371)||(30654707-30654781)
chr8 (300-362)||(38643979-38644041)
chr8 (319-364)||(35735987-35736032)
chr8 (300-368)||(465837-465905)
chr8 (298-362)||(16222864-16222928)
chr8 (298-362)||(35459823-35459887)
chr8 (319-374)||(6446709-6446764)
chr8 (300-362)||(5300073-5300135)
chr8 (319-364)||(23176766-23176811)
chr8 (305-362)||(34894968-34895025)
chr8 (313-362)||(41362519-41362568)
chr8 (298-362)||(6098643-6098707)
chr8 (297-362)||(8803934-8803995)
chr8 (300-367)||(16447002-16447069)
chr8 (300-367)||(27082965-27083032)
chr8 (319-361)||(5018013-5018055)
chr8 (324-362)||(7998364-7998402)
chr8 (297-371)||(12876101-12876175)
chr8 (308-362)||(24823407-24823461)
chr8 (313-362)||(4133148-4133197)
chr8 (313-362)||(33906225-33906274)
chr8 (297-362)||(36695090-36695155)
chr8 (329-362)||(39099265-39099298)
chr8 (319-367)||(1835392-1835440)
chr8 (319-367)||(1879233-1879281)
chr8 (319-362)||(4108915-4108958)
chr8 (319-357)||(8151415-8151453)
chr8 (300-350)||(11727037-11727087)
chr8 (300-362)||(44869497-44869559)
chr8 (313-362)||(31934026-31934075)
chr8 (319-355)||(41191022-41191058)
[»] chr3 (44 HSPs)
chr3 (297-362)||(51213099-51213164)
chr3 (297-362)||(40552377-40552442)
chr3 (298-362)||(46297881-46297945)
chr3 (313-362)||(11835740-11835789)
chr3 (297-354)||(29099356-29099413)
chr3 (297-362)||(35844319-35844384)
chr3 (297-362)||(48354934-48354999)
chr3 (297-369)||(3655320-3655392)
chr3 (300-367)||(7327603-7327671)
chr3 (319-371)||(53818512-53818564)
chr3 (319-362)||(40640637-40640680)
chr3 (300-362)||(4015453-4015515)
chr3 (313-371)||(21193590-21193648)
chr3 (300-362)||(22450961-22451023)
chr3 (308-362)||(26941389-26941443)
chr3 (300-362)||(37157701-37157763)
chr3 (319-361)||(38392631-38392673)
chr3 (322-362)||(43348282-43348322)
chr3 (319-362)||(49359631-49359674)
chr3 (300-362)||(27480500-27480562)
chr3 (300-362)||(37203060-37203122)
chr3 (300-362)||(45174496-45174558)
chr3 (300-362)||(52041044-52041106)
chr3 (305-362)||(11466817-11466874)
chr3 (297-362)||(20373414-20373479)
chr3 (297-362)||(47481515-47481580)
chr3 (300-365)||(54828821-54828886)
chr3 (326-362)||(43976032-43976068)
chr3 (319-367)||(45879501-45879549)
chr3 (298-362)||(55343403-55343467)
chr3 (319-362)||(42665544-42665587)
chr3 (319-362)||(47930669-47930712)
chr3 (319-362)||(53811979-53812022)
chr3 (319-361)||(4556543-4556585)
chr3 (319-361)||(5124671-5124713)
chr3 (319-361)||(23165841-23165883)
chr3 (300-362)||(44186622-44186684)
chr3 (300-362)||(44891500-44891561)
chr3 (300-362)||(46994771-46994833)
chr3 (300-349)||(11357486-11357535)
chr3 (297-362)||(54505801-54505866)
chr3 (297-362)||(4761767-4761834)
chr3 (314-361)||(22446199-22446247)
chr3 (329-361)||(32373466-32373498)
[»] chr7 (43 HSPs)
chr7 (297-362)||(18797306-18797369)
chr7 (297-362)||(17842705-17842770)
chr7 (297-362)||(24211718-24211783)
chr7 (297-362)||(37109849-37109914)
chr7 (297-362)||(26524446-26524511)
chr7 (316-362)||(241021-241067)
chr7 (300-362)||(5657603-5657665)
chr7 (297-367)||(31579188-31579258)
chr7 (300-362)||(48928685-48928747)
chr7 (301-362)||(7334771-7334832)
chr7 (300-365)||(25691667-25691732)
chr7 (297-362)||(32821172-32821237)
chr7 (297-362)||(38258522-38258587)
chr7 (300-364)||(27421501-27421565)
chr7 (298-365)||(23111164-23111231)
chr7 (300-362)||(12390752-12390814)
chr7 (297-362)||(9355945-9356010)
chr7 (297-362)||(27283721-27283786)
chr7 (297-362)||(43686018-43686083)
chr7 (319-363)||(3953732-3953776)
chr7 (313-364)||(8299190-8299241)
chr7 (319-362)||(23402374-23402417)
chr7 (300-362)||(8861262-8861324)
chr7 (300-362)||(21991613-21991675)
chr7 (305-362)||(15612885-15612942)
chr7 (297-350)||(22687228-22687281)
chr7 (298-362)||(31520843-31520907)
chr7 (298-362)||(37346999-37347063)
chr7 (300-348)||(48928418-48928466)
chr7 (319-362)||(4582896-4582939)
chr7 (327-362)||(30055503-30055538)
chr7 (319-362)||(40381942-40381985)
chr7 (298-364)||(44413499-44413566)
chr7 (300-362)||(6546496-6546558)
chr7 (324-362)||(10359360-10359398)
chr7 (313-367)||(32432429-32432483)
chr7 (300-362)||(33688384-33688445)
chr7 (298-362)||(10481580-10481645)
chr7 (319-356)||(22955315-22955352)
chr7 (329-362)||(41765229-41765262)
chr7 (319-352)||(46481218-46481251)
chr7 (329-361)||(10675345-10675377)
chr7 (329-365)||(19786279-19786315)
[»] chr6 (18 HSPs)
chr6 (300-362)||(4318943-4319005)
chr6 (298-362)||(5627393-5627457)
chr6 (298-362)||(7055333-7055397)
chr6 (300-364)||(30353478-30353542)
chr6 (308-362)||(8513235-8513289)
chr6 (300-362)||(20768088-20768150)
chr6 (297-371)||(1945826-1945901)
chr6 (313-364)||(6088908-6088959)
chr6 (300-362)||(7235154-7235216)
chr6 (300-365)||(29182162-29182227)
chr6 (314-362)||(3880073-3880121)
chr6 (319-362)||(3005396-3005439)
chr6 (319-362)||(19631751-19631794)
chr6 (319-371)||(30338469-30338521)
chr6 (314-365)||(21017246-21017297)
chr6 (319-365)||(6614039-6614085)
chr6 (300-362)||(33893122-33893184)
chr6 (314-362)||(18498435-18498483)
[»] chr5 (43 HSPs)
chr5 (300-362)||(15724492-15724554)
chr5 (297-362)||(14409434-14409499)
chr5 (298-362)||(5112422-5112486)
chr5 (298-362)||(12910352-12910416)
chr5 (300-368)||(25501037-25501105)
chr5 (298-362)||(26317793-26317857)
chr5 (299-362)||(22974192-22974255)
chr5 (300-362)||(8741998-8742060)
chr5 (300-362)||(19119861-19119923)
chr5 (297-362)||(31705719-31705784)
chr5 (297-362)||(35826591-35826656)
chr5 (297-364)||(27318595-27318662)
chr5 (298-364)||(699150-699216)
chr5 (300-362)||(7693232-7693294)
chr5 (297-362)||(16004484-16004550)
chr5 (300-362)||(27330308-27330370)
chr5 (297-362)||(31786754-31786819)
chr5 (297-362)||(39572821-39572886)
chr5 (298-362)||(1429254-1429318)
chr5 (319-362)||(22616496-22616539)
chr5 (319-362)||(26411295-26411338)
chr5 (300-362)||(8466747-8466809)
chr5 (313-362)||(35933904-35933953)
chr5 (297-362)||(36860425-36860490)
chr5 (320-364)||(5837555-5837599)
chr5 (297-362)||(24886104-24886171)
chr5 (298-362)||(36866764-36866828)
chr5 (314-362)||(40133387-40133435)
chr5 (297-363)||(7208971-7209038)
chr5 (300-363)||(26268075-26268138)
chr5 (300-362)||(9200235-9200297)
chr5 (327-365)||(12081284-12081322)
chr5 (319-361)||(13380498-13380540)
chr5 (300-362)||(13956456-13956518)
chr5 (297-362)||(17158138-17158206)
chr5 (300-362)||(23116333-23116395)
chr5 (300-362)||(32563151-32563213)
chr5 (300-362)||(38528347-38528409)
chr5 (314-355)||(5748437-5748478)
chr5 (326-367)||(12164926-12164967)
chr5 (313-362)||(22980795-22980844)
chr5 (323-364)||(33163513-33163554)
chr5 (327-355)||(43308790-43308818)
[»] chr2 (41 HSPs)
chr2 (297-362)||(17054232-17054297)
chr2 (297-362)||(17071873-17071938)
chr2 (297-362)||(33551122-33551187)
chr2 (319-366)||(41643870-41643917)
chr2 (297-362)||(11366517-11366582)
chr2 (313-362)||(41465511-41465560)
chr2 (298-362)||(29242275-29242339)
chr2 (321-365)||(36641985-36642029)
chr2 (319-367)||(41464008-41464056)
chr2 (319-367)||(43446465-43446513)
chr2 (300-364)||(43770978-43771041)
chr2 (319-362)||(31861897-31861940)
chr2 (300-362)||(19424767-19424829)
chr2 (322-367)||(7007051-7007096)
chr2 (297-362)||(35958911-35958976)
chr2 (297-362)||(37905711-37905775)
chr2 (314-362)||(13711466-13711514)
chr2 (314-362)||(19313854-19313902)
chr2 (319-362)||(34441924-34441967)
chr2 (319-362)||(42005391-42005434)
chr2 (300-362)||(18494407-18494469)
chr2 (300-362)||(26357579-26357641)
chr2 (300-362)||(31570873-31570935)
chr2 (297-362)||(33902070-33902133)
chr2 (300-362)||(41960885-41960947)
chr2 (314-362)||(4166924-4166972)
chr2 (300-364)||(33660507-33660571)
chr2 (319-362)||(6177777-6177820)
chr2 (319-362)||(18514774-18514817)
chr2 (319-362)||(19093415-19093458)
chr2 (319-361)||(58025-58067)
chr2 (300-362)||(4264216-4264278)
chr2 (305-362)||(2325514-2325571)
chr2 (319-360)||(18947601-18947642)
chr2 (319-364)||(30844844-30844889)
chr2 (309-362)||(39167511-39167564)
chr2 (319-376)||(39788580-39788637)
chr2 (297-365)||(3176938-3177006)
chr2 (314-362)||(4763630-4763678)
chr2 (319-362)||(19073359-19073403)
chr2 (298-362)||(19289460-19289519)
[»] scaffold0009 (2 HSPs)
scaffold0009 (299-362)||(100823-100886)
scaffold0009 (300-367)||(42345-42412)
[»] scaffold0291 (1 HSPs)
scaffold0291 (300-365)||(7886-7951)
[»] scaffold0022 (1 HSPs)
scaffold0022 (297-364)||(146134-146201)
[»] scaffold0318 (1 HSPs)
scaffold0318 (300-364)||(11906-11971)
[»] scaffold0061 (1 HSPs)
scaffold0061 (297-364)||(43957-44024)
[»] scaffold0017 (1 HSPs)
scaffold0017 (297-364)||(154763-154830)
[»] scaffold0002 (2 HSPs)
scaffold0002 (313-367)||(131-185)
scaffold0002 (313-362)||(408703-408752)
[»] scaffold0312 (1 HSPs)
scaffold0312 (319-362)||(9138-9181)
[»] scaffold0262 (1 HSPs)
scaffold0262 (319-362)||(12141-12184)


Alignment Details
Target: chr4 (Bit Score: 182; Significance: 5e-98; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 297 - 578
Target Start/End: Original strand, 879692 - 879973
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaattttgttatatcacttattccaatgcttc 396  Q
    ||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||| || |||||| |||||||  ||||| || |||||| ||||||||    
T  879692 catttttgatgttatagtgtttacttcaccaaaaaaattattctcatgacttcaccttaaaattttcctaattta-ttataacaattattcgaatgcttc 879790  T
Q  397 aaacaattcatattacaaactccaagtttacatagtagtatgaatcaaagtagatattgcctacattcaagcaatagcaaagggtaccaactactaatga 496  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  879791 aaacaattcatattacaaacaccaagtttacatagtagtatgaatcaaagtagatattgcctacattcaagcaatagcaaagggtaccaactactaatga 879890  T
Q  497 taggatagctcatactttaagttggatacatcaaatat-nnnnnnnttattagaaatttgaattattcaattaagatcagacg 578  Q
    |||||||||||||||||  | |||||||||||||||||        |||||||||||||||||||||| ||||||||||||||    
T  879891 taggatagctcatacttgtacttggatacatcaaatataaaaaaaattattagaaatttgaattattcgattaagatcagacg 879973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 879045 - 879251
Alignment:
Q  8 agaatgttcatgaagttctactactaggtaaagtatacatcatgattagaattttagataattttctagtatcattatgttgttgtcaccatttcacaca 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  879045 agaatgttcatgaagttctactactaggtaaagtatacatcatgatcacaattttagataattttctagtatcattatgttgttgtcaccatttcacaca 879144  T
Q  108 ctcttcattctcaaaccgcattttattgaacaaacttcaacnnnnnnntccattttccatgaaaccatgttaagatatcaacaaacacgtatttttgttt 207  Q
    ||||||||||||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  879145 ctcttcattctcaaaccgcgttttattgaacaaacttcaacaaaaaaatccattttccatgaaaccatgttaagatatcaacaaacatgtatttttgttt 879244  T
Q  208 agctttg 214  Q
    |||||||    
T  879245 agctttg 879251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 581 - 696
Target Start/End: Original strand, 879950 - 880065
Alignment:
Q  581 gaattattcgattaagatcagacatttatcgaattgtcgactacatagacaaacaactttcaaactatactaattgttactattgaagattattatcatt 680  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  879950 gaattattcgattaagatcagacgattatcgaattgtcgactacatagacaaccaactttcaaactatactaattgttactattgaggattattatcatt 880049  T
Q  681 atgattgtcaccttgc 696  Q
    ||||||||||||||||    
T  880050 atgattgtcaccttgc 880065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 34361635 - 34361700
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  34361635 cattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaatttt 34361700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 25184180 - 25184115
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  25184180 catttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaatttt 25184115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 32912724 - 32912789
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  32912724 catttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaatttt 32912789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 55478039 - 55478104
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  55478039 catttttgatgttatagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaatttt 55478104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 47253813 - 47253749
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47253813 ttttgatgatatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 47253749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 27396666 - 27396615
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  27396666 tgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttttct 27396615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 19440792 - 19440858
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgac-ttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  19440792 catttttgatgttatagtgttaacatcaccaaaaaagtcattctcatgactttcaccatagaatttt 19440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 28003133 - 28003195
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  28003133 ttttgatgctatagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaatttt 28003195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 38011918 - 38011856
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||    
T  38011918 ttttgatgttatagtgttgacttcaccagaaaagtcattctcatgatttcaccatagaatttt 38011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 39397982 - 39397920
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||    
T  39397982 ttttaatgttatagtgttaacttcaccataaaagtcattctaatgacttcaccatagaatttt 39397920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 52516655 - 52516597
Alignment:
Q  306 tgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  52516655 tgttatagtgttaacttcaccataaaagtcattctcatgacttcaccataaaatttttc 52516597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 4396393 - 4396328
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| ||||||| |||||||||||| | |||||||||| ||||||||||    
T  4396393 cattttttatgttatagtgttaacttcactaaaaaagtcatttttatgacttcactatagaatttt 4396328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 35021179 - 35021244
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| |||||||  |||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  35021179 catttttgatgttataatgttaacttcaccagaaaagtcattttcatgacttcaccatagaatttt 35021244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 20097494 - 20097538
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattttt 363  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  20097494 acttcaccagaaaagtcattctcatgacttcaccatagaattttt 20097538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 50697308 - 50697244
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| ||||||||||||| |||||| ||||| | ||||||||||| |||||||||    
T  50697308 attttttatgttatagtgtttacttcactaaaaaaatcatttttatgacttcaccgtagaatttt 50697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 6864101 - 6864038
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaattt 361  Q
    |||||| ||||||| ||| | |||||||||||||||||||||||||||| |||||||| |||||    
T  6864101 atttttgatgttatagtgataacttcaccaaaaaagtcattctcatgacatcaccatacaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 38812263 - 38812306
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  38812263 acttcaccagaaaagtcattctcatgacttcaccatagaatttt 38812306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 7703581 - 7703519
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| |||||||||||||||||||| | |||||||||||    
T  7703581 ttttgatgttatagtgttaacttcaccagaaaagtcattctcatgactttaacatagaatttt 7703519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 17272075 - 17272013
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| ||||||||||| || |||||||||||||||||||    
T  17272075 ttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaatttt 17272013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 29584345 - 29584407
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| ||||||||||| || |||||||||||||||||||    
T  29584345 ttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaatttt 29584407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 34948244 - 34948306
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||| ||| ||||||||||||||||||||||||||| ||||||    
T  34948244 ttttgatgttatagtgttaacttcgccagaaaagtcattctcatgacttcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 36493833 - 36493899
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||| ||| ||| || || |||||||||||||||| ||| |||||||||||||||||||||||||    
T  36493833 atttttgatggtatagtattaacttcaccaaaaaagttattttcatgacttcaccatagaatttttc 36493899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 3042678 - 3042613
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| |||||||| ||||| |||||||||||||| ||||| | |||| ||||||||||||||||    
T  3042678 cattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgatttcaccatagaatttt 3042613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 4598052 - 4597995
Alignment:
Q  305 atgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||| ||||||||| |||||||||||| |||||||||||||| ||||||    
T  4598052 atgttatagtgttaacttcaccagaaaagtcattctaatgacttcaccataaaatttt 4597995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 37663899 - 37663948
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  37663899 gtgttaacttcatcaaaaaagtcattcttatgacttcaccatagaatttt 37663948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 46884178 - 46884243
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||  ||||| ||||| |||||||||||||| | |||||||||| ||||||||||    
T  46884178 cattttttatgttacggtgttaacttcgccaaaaaagtcatttttatgacttcactatagaatttt 46884243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 9139313 - 9139249
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||| |||   ||| |||||||||||||||||| | |||||||||||||||||||||||    
T  9139313 attttttatgctataacgttaacttcaccaaaaaagtcaatttcatgacttcaccatagaatttt 9139249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 37287798 - 37287735
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaa-gtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||| ||||||||| ||||||||||| ||||||||||||||||||    
T  37287798 ttttgatgttatagtgttaactttaccaaaaaaagtcattctcattacttcaccatagaatttt 37287735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 38811858 - 38811815
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||| |||||||||||||||||||||||||||||    
T  38811858 acttcaccagaaaaatcattctcatgacttcaccatagaatttt 38811815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 47073660 - 47073703
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  47073660 acttcaccaaaaaagtcattatcatgactttaccatagaatttt 47073703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 55241270 - 55241313
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| | ||||||||||||||||||||||||||||||||||    
T  55241270 acttcactagaaaagtcattctcatgacttcaccatagaatttt 55241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 19089608 - 19089662
Alignment:
Q  308 ttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||| |||||| ||||||||| ||||| |||||||||||||||||||||    
T  19089608 ttatagtgttaacttcatcaaaaaagttattcttatgacttcaccatagaatttt 19089662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 25701204 - 25701266
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| |||||||  |||| |||| ||||||||||||||| |||||||||||||||| ||||||    
T  25701204 ttttgatgttataatgttaactttaccaaaaaagtcattatcatgacttcaccataaaatttt 25701266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 42199796 - 42199726
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    ||||||| ||||||| || || |||||||||||||| ||||||| |||| ||||||||||| |||| ||||    
T  42199796 catttttgatgttatagtattaacttcaccaaaaaaatcattcttatgatttcaccatagatttttcctaa 42199726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 4205183 - 4205118
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| || |||| ||||| |||||| || |||||||||| || ||||||||||||||||||||    
T  4205183 catttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaatttt 4205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 33255544 - 33255499
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  33255544 acttcaccaaaaaagtgattctcgtgacttcaccatataatttttc 33255499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 49376017 - 49375968
Alignment:
Q  314 tgtttacttcacca-aaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  49376017 tgttaacttcaccagaaaaagtcattctcatgacttcaccgtagaatttt 49375968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 33341459 - 33341395
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||| ||| ||| ||||| | ||||||| |||| |||||||||||||||||| ||||||||||||    
T  33341459 ttttgatgatatagtgttaatttcaccagaaaaatcattctcatgacttcactatagaatttttc 33341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 53124353 - 53124289
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||||||| ||||| |||||||||||||| ||||| | ||||||||| |||| ||||||    
T  53124353 atttttgatgttatagtgttaacttcaccaaaaaaatcattttaatgacttcatcatataatttt 53124289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 2704557 - 2704514
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||    
T  2704557 acttcaccagaaaagtcattttcatgacttcaccataaaatttt 2704514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 28293240 - 28293283
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||| ||||||||||||||||||||||| | |||||||||    
T  28293240 acttcaccgaaaaagtcattctcatgacttcagcgtagaatttt 28293283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 49878680 - 49878638
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  49878680 acttcaccaaaaaagtcattatcat-acttcaccatagaatttt 49878638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 51204624 - 51204581
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||||||||| | |||||||||||||||||||||    
T  51204624 acttcaccagaaaagtcatttttatgacttcaccatagaatttt 51204581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 54995802 - 54995845
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||||||||| ||||||||||| | |||||||||    
T  54995802 acttcaccaaaaaagtcattatcatgacttcatcgtagaatttt 54995845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 2266859 - 2266905
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    ||||||| | |||||||||| |||||||||||||||| |||||||||    
T  2266859 acttcactagaaaagtcattatcatgacttcaccatataatttttct 2266905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 7152253 - 7152315
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| |||||||  |||| |||| |||| ||||||||||  ||||||||||||||||||||||    
T  7152253 ttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaatttt 7152315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 17612372 - 17612338
Alignment:
Q  327 aaaaaagtcattctcatgacttcaccatagaattt 361  Q
    |||||| ||||||||||||||||||||||||||||    
T  17612372 aaaaaaatcattctcatgacttcaccatagaattt 17612338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 32579508 - 32579446
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| |||||||  |||| ||||||||| ||||||||||||||  ||||||||||| ||||||    
T  32579508 ttttgatgttataatgttgacttcaccagaaaagtcattctcagaacttcaccataaaatttt 32579446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 35025735 - 35025797
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||||| |||| ||||| ||||||||||| |||||||||||    
T  35025735 ttttgatgctatagtgttgacttcaccagaaaaatcattttcatgacttcagcatagaatttt 35025797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 37775736 - 37775663
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatttt 371  Q
    ||||||| || |||| ||| | |||||||||||||| ||||| | ||||||||||| ||||| ||||||||||||    
T  37775736 catttttaatattatagtgctaacttcaccaaaaaaatcattttaatgacttcaccgtagaa-ttttctaatttt 37775663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 369
Target Start/End: Complemental strand, 47236909 - 47236859
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatt 369  Q
    |||| ||||||||| ||||| |||||| ||||||||| |||||||||||||    
T  47236909 acttaaccaaaaaaatcattttcatgatttcaccataaaatttttctaatt 47236859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 9743631 - 9743590
Alignment:
Q  321 ttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||||||  |||||||| |||||||||||||    
T  9743631 ttcaccaaaaaagtcatttacatgactttaccatagaatttt 9743590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 879292 - 879333
Alignment:
Q  249 atctccttaccctttaccgcgactttgtattatgataatttgtt 292  Q
    |||||||||||||||||||  |||||||| ||||||||||||||    
T  879292 atctccttaccctttaccg--actttgtagtatgataatttgtt 879333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 5048112 - 5048176
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||| ||||||| | ||| ||||||||| |||| |||||||||| ||||||  ||||||||||||    
T  5048112 ttttgatgttatagagttgacttcaccagaaaaatcattctcataacttcattatagaatttttc 5048176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 314 - 366
Target Start/End: Original strand, 33816694 - 33816746
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttcta 366  Q
    |||| ||||||||| |||| ||||||||||||||| | |||| ||||||||||    
T  33816694 tgttgacttcaccagaaaaatcattctcatgacttaagcatataatttttcta 33816746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 15752091 - 15752025
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15752091 attttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 15752025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 1547350 - 1547285
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  1547350 cattttttatgttatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 1547285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 10922790 - 10922725
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||| ||||||||| ||||||    
T  10922790 cattttttatgttatagtgttaacttcaccaaaaaaatcattctcatgatttcaccataaaatttt 10922725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 298 - 371
Target Start/End: Complemental strand, 18422713 - 18422640
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatttt 371  Q
    |||||| ||||||| ||||| |||||||||||||||||||| | ||||||||||||||||||||| ||| ||||    
T  18422713 atttttgatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcctattttt 18422640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 10182122 - 10182186
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||  || || |||||||||||||||||||| |||||||||||||||||||||||    
T  10182122 attttttatgttacagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaatttt 10182186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 37619010 - 37619074
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||||||| ||||| |||||||||||||||||||||| || ||||||||||||||||||    
T  37619010 atttttgatgttatagtgttaacttcaccaaaaaagtcattcttataacttcaccatagaatttt 37619074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 30254921 - 30254850
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaat 368  Q
    ||||||| ||||||| ||||| |||||| ||||||||||||| | ||||||||||||||||||||| |||||    
T  30254921 catttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaattttcctaat 30254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 27227592 - 27227655
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||| ||  ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  27227592 cattttttatgcta--gtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaatttt 27227655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 19899882 - 19899947
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||||| ||||| | |||||||||||||||||||||    
T  19899882 catttttgatgttatagtgttaacttcaccaaaaaaatcattattatgacttcaccatagaatttt 19899947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 23999409 - 23999345
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||| | ||||| |||||||||||||| ||||||| |||||||||||||| ||||||    
T  23999409 attttttatgttgtagtgttaacttcaccaaaaaaatcattcttatgacttcaccataaaatttt 23999345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 30254487 - 30254416
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaat 368  Q
    ||||||| |||||||  |||| |||||| ||||||||||||||| || |||||||||||||||||| |||||    
T  30254487 catttttgatgttatattgttaacttcaacaaaaaagtcattcttataacttcaccatagaattttcctaat 30254416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 47279204 - 47279161
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  47279204 acttcaccaaaaaagtcattctcatgacttcaccatagattttt 47279161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 2959808 - 2959746
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||| || |||||||||| |||||||||||||||||||||||    
T  2959808 ttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaatttt 2959746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 3309208 - 3309146
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||| |||| |||||||||||||||||||| |||||||||||||    
T  3309208 ttttgatgttatagtgttaactttaccagaaaagtcattctcatgactttaccatagaatttt 3309146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 14758101 - 14758039
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| |||||||||||||||||||||||| || ||||||    
T  14758101 ttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcaccgtaaaatttt 14758039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 16415705 - 16415643
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  16415705 ttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccttagaatttt 16415643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 38823274 - 38823212
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  38823274 ttttgatgctatagtgttaacttaaccagaaaagtcattctcatgacttcaccatagaatttt 38823212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 47682608 - 47682671
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||| ||  ||||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  47682608 cattttttatgcta--gtgttaacttcaccaaaaaagtcactctcatgacttcaccataaaatttt 47682671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 15382996 - 15382931
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| | |||||||||||||||||| | || ||||||||||||||||||    
T  15382996 catttttgatgttatagtgttaatttcaccaaaaaagtcatttttataacttcaccatagaatttt 15382931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 31621674 - 31621731
Alignment:
Q  305 atgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||| ||||||| | |||||||||||||||||||||||| |||||||||    
T  31621674 atgttatagtgttgacttcactagaaaagtcattctcatgacttcaccgtagaatttt 31621731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 32267097 - 32267032
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| |||||||  |||| ||||||| |||||||||||||| |||||||||||||| ||||||    
T  32267097 catttttgatgttatattgttaacttcacaaaaaaagtcattcttatgacttcaccataaaatttt 32267032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 302 - 362
Target Start/End: Complemental strand, 21289723 - 21289663
Alignment:
Q  302 tttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||| ||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  21289723 tttatgatatagtgttaacttcaccagaaaagtcattctcatgacttcacaatagattttt 21289663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 366
Target Start/End: Complemental strand, 41926225 - 41926157
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttcta 366  Q
    |||||| ||||||| || || |||||| ||||||| ||||| |||| ||||||||||||||||||||||    
T  41926225 atttttgatgttatagtattaacttcatcaaaaaaatcattttcataacttcaccatagaatttttcta 41926157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 42721101 - 42721037
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||| ||| | | | |||||||||||||| ||||| |||||||||||||||||||||||    
T  42721101 attttttatgatatagggctaacttcaccaaaaaaatcattttcatgacttcaccatagaatttt 42721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 4150490 - 4150533
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  4150490 acttcaccagaaaagtcattatcatgacttcaccatagaatttt 4150533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 28769716 - 28769649
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    ||||||| |||| || ||||| ||||||| |||||||| ||| | |||||||||||||||||||||||    
T  28769716 catttttgatgtcatagtgttaacttcacaaaaaaagttatttttatgacttcaccatagaatttttc 28769649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 37451355 - 37451292
Alignment:
Q  291 ttatttcattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccat 354  Q
    ||||| ||||||| ||||||| ||||| |||| ||||||||||||||| | |||||||||||||    
T  37451355 ttattacatttttgatgttatagtgttaactttaccaaaaaagtcatttttatgacttcaccat 37451292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 43579287 - 43579244
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| | ||||||||||||||||||||||||||||||||||    
T  43579287 acttcactagaaaagtcattctcatgacttcaccatagaatttt 43579244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 7079198 - 7079252
Alignment:
Q  308 ttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||| |||||||||||||||||||| ||||||||| |||||| ||||||    
T  7079198 ttatagtgttaacttcaccaaaaaagtcattatcatgactttaccataaaatttt 7079252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 42663788 - 42663830
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattt 361  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  42663788 acttcactaaaaaagtcattatcatgacttcaccatagaattt 42663830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 8222194 - 8222129
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| ||||||| ||||| |||||| | ||||||||||| |||||||||    
T  8222194 catttttgatgttatagtgttaacttcactaaaaaggtcatttttatgacttcaccgtagaatttt 8222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 30327065 - 30327130
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| | ||||| |||||||||||| | |||||||||| ||||||||||    
T  30327065 catttttgatgttatagtgttaaattcacaaaaaaagtcatttttatgacttcactatagaatttt 30327130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 34012498 - 34012555
Alignment:
Q  305 atgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||| |||||| || ||| |||||| |||||||||||||||||||||||    
T  34012498 atgttatagtgttaacttcatcataaacgtcattttcatgacttcaccatagaatttt 34012555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 238641 - 238693
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    ||||| |||||||||||||||| ||| || ||||||||| |||||||||||||    
T  238641 gtgttaacttcaccaaaaaagttattttcgtgacttcactatagaatttttct 238693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 16132520 - 16132472
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    |||||||||||||||||| |||  |||||||||||||||||||| ||||    
T  16132520 acttcaccaaaaaagtcaatctattgacttcaccatagaattttcctaa 16132472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 13876922 - 13876965
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||    
T  13876922 acttcaccataaaagtcattttcataacttcaccatagaatttt 13876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 26970306 - 26970263
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||    
T  26970306 acttcaccaaaaaagtcattatcatgactttaccataaaatttt 26970263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 27267312 - 27267364
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcac 351  Q
    ||||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||    
T  27267312 cattttttatgcta--gtgttaacttcaccaaaaaaatcattctcatgacttcac 27267364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 353
Target Start/End: Complemental strand, 47279235 - 47279196
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcacca 353  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  47279235 tgttaacttcaccaaaaaaatcattctcatgacttcacca 47279196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 22170814 - 22170752
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||  | |||||||||| |||||| ||||||||||||||||    
T  22170814 ttttgatgttatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaatttt 22170752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 11742479 - 11742528
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| ||||||||| ||||||||||||||| ||||||| ||| ||||||    
T  11742479 gtgttaacttcaccagaaaagtcattctcataacttcacgataaaatttt 11742528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 33725735 - 33725780
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    ||||||| | ||||||||||||| |||||| |||||||||||||||    
T  33725735 acttcactagaaaagtcattctcttgactttaccatagaatttttc 33725780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 46931474 - 46931404
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaag---tcattctcatgacttcaccatagaatttttc 364  Q
    ||||||| ||||||| ||||| ||||||| ||||||    ||||||| || ||||||||||||||||||||    
T  46931474 catttttgatgttatagtgttaacttcacaaaaaaaaaattcattcttataacttcaccatagaatttttc 46931404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 10555326 - 10555391
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  10555326 cattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccgtagaatttt 10555391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 7891073 - 7891139
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  7891073 atttttgatgttatagtgttaacttcacaaaaaaagtcattctcatgacttcaccatagaatttttc 7891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 23854555 - 23854620
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  23854555 cattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccgtagactttt 23854620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 37970643 - 37970704
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaa 358  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  37970643 catttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 43643719 - 43643784
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  43643719 catttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaatttt 43643784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 1150229 - 1150301
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatt 369  Q
    ||||||| ||||||| | ||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  1150229 catttttgatgttatagcgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcctaatt 1150301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 15009306 - 15009243
Alignment:
Q  299 ttttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  15009306 tttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaatttt 15009243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 1204993 - 1204928
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| || ||||||    
T  1204993 cattttttatgttatagtgttaacttcaccagaaaagtcattctcatgacttcaccgtaaaatttt 1204928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 13307686 - 13307624
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  13307686 ttttgatgttatagtgttaacttcaccagaaaaatcattctcatgacttcaccatagaatttt 13307624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 30654707 - 30654781
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatttt 371  Q
    ||||||||||||||| ||||| |||||||||||||| ||| ||| |||||||||||||| |||||| ||| ||||    
T  30654707 cattttttatgttatagtgttaacttcaccaaaaaaatcactcttatgacttcaccataaaattttcctattttt 30654781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 38644041 - 38643979
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  38644041 ttttgatgttatagtgttaacttgaccaaaaaagtcattctcatgatttcaccatagaatttt 38643979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 35735987 - 35736032
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  35735987 acttcaccaaaaaagtcattctaatgacttcaccatagaatttttc 35736032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 465905 - 465837
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaat 368  Q
    |||| ||||||| ||||| ||||||||| |||||||||| | |||||||||||||| ||||||||||||    
T  465905 ttttgatgttatcgtgttaacttcaccacaaaagtcattttaatgacttcaccataaaatttttctaat 465837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 16222928 - 16222864
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| ||||| | ||||||| ||||||||||||||||| |||||| |||||||||    
T  16222928 attttttatgttatagtgttaaattcaccagaaaagtcattctcatgatttcaccgtagaatttt 16222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 35459823 - 35459887
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||| || || |||| || ||||||||||||||||||||||||||||||||||||    
T  35459823 attttttatattatagtattaactttacgaaaaaagtcattctcatgacttcaccatagaatttt 35459887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 374
Target Start/End: Original strand, 6446709 - 6446764
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaattttgtt 374  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||| | |||||||    
T  6446709 acttcaccagaaaagtcattatcatgacttcaccatagaatttttcaatttttgtt 6446764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 5300073 - 5300135
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  5300073 ttttgatgctatagtgttaacttcattaaaaaagtcattctcatgacttcaccatagaatttt 5300135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 23176766 - 23176811
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||    
T  23176766 acttcaccaaaaaagtcattttcatgacttcaccatagaaattttc 23176811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 34895025 - 34894968
Alignment:
Q  305 atgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||| |||||| || |||||||||| |||||||||||||||||||||||    
T  34895025 atgttatagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaatttt 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 41362568 - 41362519
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  41362568 gtgttaacttcaccaaaaaagtcattttcataacttcaccatagaatttt 41362519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 6098643 - 6098707
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||| ||| || || |||||||||||||||| ||| |||||||||||||||||||||||    
T  6098643 atttttgatgctatagtattaacttcaccaaaaaagttattttcatgacttcaccatagaatttt 6098707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 8803934 - 8803995
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||||||||||    |||||||||||||||||||||    
T  8803934 catttttgatgttatagtgttaacttcaccaaaaaagtcat----atgacttcaccatagaatttt 8803995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 300 - 367
Target Start/End: Original strand, 16447002 - 16447069
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    |||| ||||||| ||||| |||| | || |||||||||| ||||||||||||||||||||||| ||||    
T  16447002 ttttgatgttatagtgttaactttatcagaaaagtcattttcatgacttcaccatagaattttcctaa 16447069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 300 - 367
Target Start/End: Original strand, 27082965 - 27083032
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    |||| ||| ||| ||||| ||||||||| |||||||| ||| ||||||||||||||||||||| ||||    
T  27082965 ttttgatgctatagtgttaacttcaccagaaaagtcagtctgatgacttcaccatagaattttcctaa 27083032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 5018055 - 5018013
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattt 361  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  5018055 acttcactaaaaaagtcattatcatgacttcaccatagaattt 5018013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 7998402 - 7998364
Alignment:
Q  324 accaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  7998402 accagaaaagtcattctcatgacttcaccatagaatttt 7998364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 12876175 - 12876101
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatttt 371  Q
    |||||||||| |||| ||||| |||||| || |||||||||| || |||||| ||||||||||||| | ||||||    
T  12876175 cattttttatattatagtgttaacttcatcagaaaagtcattttcgtgacttaaccatagaattttccaaatttt 12876101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 24823407 - 24823461
Alignment:
Q  308 ttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||| ||||||||||||||||||||||||| |||| ||||||| |||||    
T  24823407 ttatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtatttt 24823461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 4133148 - 4133197
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| |||||||||||||||||||||| ||||||| |||||| ||||||    
T  4133148 gtgttaacttcaccaaaaaagtcattctgatgacttgaccataaaatttt 4133197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 33906274 - 33906225
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| ||||||||| ||||||||||||||| | ||||||||||||||||    
T  33906274 gtgttgacttcaccagaaaagtcattctcataatttcaccatagaatttt 33906225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 36695090 - 36695155
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| || |||| ||||| |||||| || |||||||||| || ||||||||||||||||||||    
T  36695090 catttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaatttt 36695155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 39099265 - 39099298
Alignment:
Q  329 aaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||||||||||||||||||||||    
T  39099265 aaaagtcattctcatgacttcaccatagaatttt 39099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 1835392 - 1835440
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    |||||||||||||||||||||| |  |||||||||||||||||| ||||    
T  1835392 acttcaccaaaaaagtcattctaacaacttcaccatagaattttcctaa 1835440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 1879233 - 1879281
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    |||||||||||||||||||||| |  |||||||||||||||||| ||||    
T  1879233 acttcaccaaaaaagtcattctaacaacttcaccatagaattttcctaa 1879281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 4108915 - 4108958
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||    
T  4108915 actttaccaaaaaagtcattttcatgacttcaccataaaatttt 4108958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 8151415 - 8151453
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccataga 357  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  8151415 acttcaccaaaaaagtcattttcatgactgcaccataga 8151453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 11727087 - 11727037
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttca 350  Q
    |||| ||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  11727087 ttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttca 11727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 44869559 - 44869497
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||||||||||||| ||||| || | |||||| |||||||||    
T  44869559 ttttaatgttatagtgttaacttcaccaaaaaagttattcttataatttcaccgtagaatttt 44869497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 31934026 - 31934075
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| |||||||||||||| |||||||||| |||||||  |||||||||    
T  31934026 gtgttaacttcaccaaaaaaatcattctcataacttcacgttagaatttt 31934075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 41191022 - 41191058
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccata 355  Q
    |||||||||||||||||||| |||| |||||||||||    
T  41191022 acttcaccaaaaaagtcattttcataacttcaccata 41191058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 1e-21; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 51213099 - 51213164
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51213099 cattttttatgttacagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 51213164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 40552377 - 40552442
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  40552377 catttttgatgttatagtgttaacttctccaaaaaagtcattctcatgacttcaccatagaatttt 40552442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 46297881 - 46297945
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  46297881 atttttgatgttatagtgttaacttcaccagaaaagtcattttcatgacttcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 11835740 - 11835789
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  11835740 gtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaatttt 11835789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 29099413 - 29099356
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccat 354  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||||||    
T  29099413 cattttttatgttatagtgttaacttcaccagaaaagtcattctaatgacttcaccat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 35844384 - 35844319
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||  |||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  35844384 catttttgttgttatagtgttaacttcaccagaaaagtcattatcatgacttcaccatagaatttt 35844319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 48354999 - 48354934
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| || |||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  48354999 catttttaatattatagtgttaacttcaccataaaaatcattctcatgacttcaccatagaatttt 48354934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 3655320 - 3655392
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatt 369  Q
    ||||||||||||||| ||||| |||| | ||||||||||||| | |||||||||||||| |||||| ||||||    
T  3655320 cattttttatgttatagtgttaactttatcaaaaaagtcatttttatgacttcaccataaaattttcctaatt 3655392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 367
Target Start/End: Original strand, 7327603 - 7327671
Alignment:
Q  300 tttttatgttattgtgttta-cttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    |||| ||||||| ||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  7327603 ttttgatgttatagtgtttaacttcactaaaaaagtcattctcataacttcaccatagaattttcctaa 7327671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 371
Target Start/End: Original strand, 53818512 - 53818564
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatttt 371  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  53818512 acttcaccagaaaaatcattctcatgacttcaccataaaatttttctaatttt 53818564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 40640637 - 40640680
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  40640637 acttcaccagaaaagtcattctcatgacttcaccatagaatttt 40640680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 4015515 - 4015453
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  4015515 ttttgatgctatagtgttaacttcatcagaaaagtcattctcatgacttcaccatagaatttt 4015453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 21193648 - 21193590
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatttt 371  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||||||| || |||||    
T  21193648 gtgttaacttcaccagaaaagtcattctcatgactttaccatagaattttccttatttt 21193590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 22451023 - 22450961
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  22451023 ttttgatgctatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaatttt 22450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 26941389 - 26941443
Alignment:
Q  308 ttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||    
T  26941389 ttatagtgttaacttcaccaaaaaaatcattcttatgacttcaccatagaatttt 26941443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 37157763 - 37157701
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||| |||||||| |||| |||||||||||||||||||||||    
T  37157763 ttttgatgttatagtgttaacttcatcaaaaaagccattttcatgacttcaccatagaatttt 37157701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 38392631 - 38392673
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattt 361  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  38392631 acttcaccaaaaaagtcattctcatgacttcaccatataattt 38392673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 43348322 - 43348282
Alignment:
Q  322 tcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  43348322 tcaccaaaaaaatcattctcatgacttcaccatagaatttt 43348282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 49359631 - 49359674
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  49359631 acttcacaaaaaaagtcattttcatgacttcaccatagaatttt 49359674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 27480500 - 27480562
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||| ||||||||  ||||||||||||||||| |||||||||||    
T  27480500 ttttgatgttatagtgttgactttaccaaaaatatcattctcatgacttcatcatagaatttt 27480562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 37203122 - 37203060
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||| ||||||| ||||| | |||||||||||||||||||||    
T  37203122 ttttgatgttatagtgttaacttcatcaaaaaaatcatttttatgacttcaccatagaatttt 37203060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 45174558 - 45174496
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||||||||||||| |||||||  ||||||||||| ||||||    
T  45174558 ttttgatgttatagtgttaacttcaccaaaaaagttattctcacaacttcaccataaaatttt 45174496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 52041044 - 52041106
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| || || ||||||||| ||||||||||||||||||||||||  ||||||||    
T  52041044 ttttgatgttatagtattaacttcaccagaaaagtcattctcatgacttcacctcagaatttt 52041106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 11466874 - 11466817
Alignment:
Q  305 atgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| || || |||||| || |||||||||||||| |||||||||||||||||||    
T  11466874 atgttatagtcttaacttcatcagaaaagtcattctcaagacttcaccatagaatttt 11466817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 20373414 - 20373479
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| || || |||||||||||||| ||||||| |||||||||| ||| ||||||    
T  20373414 catttttgatgttatagtattaacttcaccaaaaaaatcattcttatgacttcactataaaatttt 20373479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 47481580 - 47481515
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||||  ||||||  |||||||||||||| ||||||    
T  47481580 catttttgatgttatagtgttaacttcaccaaaaacatcattcctatgacttcaccataaaatttt 47481515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 54828821 - 54828886
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    |||||||||||| ||||| |||| ||||||||| | ||| | |||||||||||||| |||||||||    
T  54828821 tttttatgttatagtgttaactttaccaaaaaaattatttttatgacttcaccataaaatttttct 54828886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 43976032 - 43976068
Alignment:
Q  326 caaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||||||||||||||||||| ||||||    
T  43976032 caaaaaagtcattctcatgacttcaccataaaatttt 43976068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 45879501 - 45879549
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    |||| |||| |||||||||||||||||||||| ||||||||||| ||||    
T  45879501 actttaccagaaaagtcattctcatgacttcagcatagaattttcctaa 45879549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 55343403 - 55343467
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| || |||| ||||| |||||| || |||||||||| || ||||||||||||||||||||    
T  55343403 atttttgatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaatttt 55343467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 42665544 - 42665587
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||    
T  42665544 acttcaccaaaaaaatcattatcataacttcaccatagaatttt 42665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 47930669 - 47930712
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||    
T  47930669 acttcaccagaaaaatcattttcatgacttcaccatagaatttt 47930712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 53811979 - 53812022
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| || |||||||||||||||||||||||| |||||||||    
T  53811979 acttcatcagaaaagtcattctcatgacttcaccgtagaatttt 53812022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 4556585 - 4556543
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattt 361  Q
    ||||||| | |||||||||| ||||||||||||||||||||||    
T  4556585 acttcacgagaaaagtcattttcatgacttcaccatagaattt 4556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 5124713 - 5124671
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattt 361  Q
    |||||||||||||||||||| | |||| |||||||||||||||    
T  5124713 acttcaccaaaaaagtcattttaatgatttcaccatagaattt 5124671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 23165841 - 23165883
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattt 361  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||    
T  23165841 acttcactaaaaaaatcattatcatgacttcaccatagaattt 23165883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 44186622 - 44186684
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| |||||||||||||| ||||||||  ||||||| |||||||||||    
T  44186622 ttttgatgctatagtgttaacttcaccaaaaaaatcattctctcgacttcatcatagaatttt 44186684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 44891561 - 44891500
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||||||| |||||| ||||||||||||| || ||||||    
T  44891561 ttttgatgttatagtgttaacttcaccaaaaa-gtcattttcatgacttcaccgtataatttt 44891500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 46994771 - 46994833
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| || || |||||||||||||| ||||||| | ||||||||| |||||||||    
T  46994771 ttttgatgttatagtattaacttcaccaaaaaaatcattcttacgacttcaccgtagaatttt 46994833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 11357486 - 11357535
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttc 349  Q
    |||| ||| ||| ||||| ||||||||| |||||||||||||||||||||    
T  11357486 ttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 54505866 - 54505801
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||| |||||||||||||||   ||||||| |||| ||||||    
T  54505866 catttttgatgttatagtgttaacttcaacaaaaaagtcattcttgcgacttcatcataaaatttt 54505801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 4761767 - 4761834
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaa--gtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| || |||| || || ||||||||||||||  |||| |||||||| ||||||||||||||||    
T  4761767 catttttgatattatagtattaacttcaccaaaaaaaagtcaatctcatgaattcaccatagaatttt 4761834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 22446199 - 22446247
Alignment:
Q  314 tgtttacttcaccaaaa-aagtcattctcatgacttcaccatagaattt 361  Q
    |||| |||||||||||| |||||||| ||||||||||||| ||||||||    
T  22446199 tgttaacttcaccaaaaaaagtcattttcatgacttcaccgtagaattt 22446247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 32373498 - 32373466
Alignment:
Q  329 aaaagtcattctcatgacttcaccatagaattt 361  Q
    |||||||||||||||||||||| ||||||||||    
T  32373498 aaaagtcattctcatgacttcatcatagaattt 32373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 7e-20; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 18797369 - 18797306
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18797369 cattttttatgtta--gtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 18797306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 17842705 - 17842770
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  17842705 cattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaatttt 17842770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 24211783 - 24211718
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  24211783 catttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaatttt 24211718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 37109914 - 37109849
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  37109914 cattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaatttt 37109849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 26524446 - 26524511
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||    
T  26524446 catttttgatgttatagtgttaacatcaccagaaaagtcattctcatgacttcaccatagaatttt 26524511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 241021 - 241067
Alignment:
Q  316 tttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  241021 tttacttcaccaaaaaagtcattttcatgacttcaccatagaatttt 241067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 5657603 - 5657665
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  5657603 ttttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 5657665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 31579188 - 31579258
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    ||||||| ||||||| ||||| |||||||||||||| | ||||| ||||||||||||||||||||| ||||    
T  31579188 catttttgatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaattttcctaa 31579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 48928685 - 48928747
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  48928685 ttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcaccataaaatttt 48928747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 362
Target Start/End: Complemental strand, 7334832 - 7334771
Alignment:
Q  301 ttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||| ||||| |||||| ||||||||||||||||| ||||||||| |||||||||    
T  7334832 ttttatgttatagtgttaacttcatcaaaaaagtcattctcacgacttcaccgtagaatttt 7334771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 25691667 - 25691732
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    |||| ||||||| ||||| ||||||| | ||||||||||||||||||||||||||| |||||||||    
T  25691667 ttttgatgttatagtgttaacttcacgagaaaagtcattctcatgacttcaccataaaatttttct 25691732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 32821172 - 32821237
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| |||||||  |||| |||||||||||||| ||||| |||||||||||||||||||||||    
T  32821172 catttttgatgttatattgttaacttcaccaaaaaaatcattttcatgacttcaccatagaatttt 32821237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 38258587 - 38258522
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| | ||||||||||| |||||||||    
T  38258587 cattttttatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccgtagaatttt 38258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 27421501 - 27421565
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||| ||||||| ||||| |||||||||||||| ||||| ||| |||||||||||||||||||||    
T  27421501 ttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgacttcaccatagaatttttc 27421565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 23111231 - 23111164
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    |||||| ||||||| ||||| ||||||||| |||| ||||| |||||||||||||| |||||||||||    
T  23111231 atttttgatgttatagtgttaacttcaccagaaaaatcattttcatgacttcaccacagaatttttct 23111164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 12390752 - 12390814
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||||||||||||||  ||| |||||||||||||||||||||    
T  12390752 ttttgatgttatagtgttaacttcaccaaaaaagtcgatctgatgacttcaccatagaatttt 12390814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 9355945 - 9356010
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||| ||| ||||| | ||||||||||  ||||||||||||||||||||||| ||||||    
T  9355945 cattttttatgctatagtgttaaattcaccaaaatggtcattctcatgacttcaccataaaatttt 9356010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 27283786 - 27283721
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||||| ||||| | || ||||||||||||||||||    
T  27283786 catttttgatgttatagtgttaacttcaccaaaaaaatcatttttataacttcaccatagaatttt 27283721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 43686083 - 43686018
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| || |||| ||||| |||||||| ||||||||||| || ||||||||||||||||||||    
T  43686083 catttttgatattatagtgttaacttcacccaaaaagtcattttcgtgacttcaccatagaatttt 43686018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 3953776 - 3953732
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattttt 363  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||    
T  3953776 acttcaccagaaaagtcattctcatgacttcatcatagaattttt 3953732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 8299241 - 8299190
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    ||||| ||||||||| |||||||||| || ||||||||||||||||||||||    
T  8299241 gtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttttc 8299190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 23402374 - 23402417
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||    
T  23402374 acttcaccagaaaagtcattctcatgacttcgccatagaatttt 23402417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 8861324 - 8861262
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||| | | ||||||||||||||||||||||||||||||||||    
T  8861324 ttttgatgctatagtgttaacttcgcgagaaaagtcattctcatgacttcaccatagaatttt 8861262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 21991675 - 21991613
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||||| |||| ||||||||||||||||||| |||||||||    
T  21991675 ttttgatgctatagtgttaacttcaccataaaaatcattctcatgacttcaccctagaatttt 21991613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 15612885 - 15612942
Alignment:
Q  305 atgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||| ||||||| | ||| || |||||||||||||||||||||||||||    
T  15612885 atgttatagtgttaacttcacaagaaacgttattctcatgacttcaccatagaatttt 15612942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 22687281 - 22687228
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttca 350  Q
    ||||||| ||||||| ||||| |||||| || ||||||||||||||||||||||    
T  22687281 catttttgatgttatagtgttaacttcatcagaaaagtcattctcatgacttca 22687228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 31520843 - 31520907
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||| ||| || || |||||||||||||||||||| ||||||||||| |||| ||||||    
T  31520843 atttttgatggtatagtattaacttcaccaaaaaagtcattttcatgacttcatcataaaatttt 31520907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 37347063 - 37346999
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||| ||| || || |||||||||||||| ||||| |||||||||||||||| ||||||    
T  37347063 atttttgatggtatagtattaacttcaccaaaaaaatcattttcatgacttcaccataaaatttt 37346999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 48928418 - 48928466
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgactt 348  Q
    |||| ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  48928418 ttttgatgttatagtgttgacttcaccagaaaagtcattctcatgactt 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 4582939 - 4582896
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||||||||| || ||||||||||||||||||||    
T  4582939 acttcaccagaaaagtcattttcgtgacttcaccatagaatttt 4582896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 30055538 - 30055503
Alignment:
Q  327 aaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| |||||||||||||||||||||    
T  30055538 aaaaaagtcattcttatgacttcaccatagaatttt 30055503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 40381985 - 40381942
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| ||||||||||||||| |||||||| |||||||||    
T  40381985 acttcaccagaaaagtcattctcataacttcaccgtagaatttt 40381942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 44413499 - 44413566
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaa-aagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||| ||||||| ||||| ||||||  |||| |||||||| ||||||||| |||||||||||||||    
T  44413499 atttttgatgttatagtgttaacttcattaaaaaaagtcattttcatgactttaccatagaatttttc 44413566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 6546558 - 6546496
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||| | |||| ||||||| |||||||||||||||||||||    
T  6546558 ttttgatgctatagtgttaacttcactagaaaaatcattcttatgacttcaccatagaatttt 6546496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 10359360 - 10359398
Alignment:
Q  324 accaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  10359360 accagaaaagtcattatcatgacttcaccatagaatttt 10359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 367
Target Start/End: Complemental strand, 32432483 - 32432429
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    ||||| ||||||||| |||| ||||| || |||||||||||||||||||| ||||    
T  32432483 gtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcctaa 32432429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 33688384 - 33688445
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||| |||| ||||||||||||||| ||||||||||| ||||||    
T  33688384 ttttgatgttatagtgttaactt-accagaaaagtcattctcataacttcaccatataatttt 33688445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 10481645 - 10481580
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaa-gtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| ||||| ||||||  |||||| ||||||||| | |||| |||||||||||||    
T  10481645 attttttatgttatagtgttaacttcattaaaaaaagtcattctcctaactttaccatagaatttt 10481580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 356
Target Start/End: Original strand, 22955315 - 22955352
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatag 356  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  22955315 acttcaccagaaaagtcattctcattacttcaccatag 22955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 41765229 - 41765262
Alignment:
Q  329 aaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||||||||||||||| |||||||    
T  41765229 aaaagtcattctcatgacttcaccatggaatttt 41765262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 352
Target Start/End: Original strand, 46481218 - 46481251
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcacc 352  Q
    |||||||||||||||||||| |||||||||||||    
T  46481218 acttcaccaaaaaagtcattttcatgacttcacc 46481251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 10675345 - 10675377
Alignment:
Q  329 aaaagtcattctcatgacttcaccatagaattt 361  Q
    |||||||||| ||||||||||||||||||||||    
T  10675345 aaaagtcattatcatgacttcaccatagaattt 10675377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 19786315 - 19786279
Alignment:
Q  329 aaaagtcattctcatgacttcaccatagaatttttct 365  Q
    |||||||||||||||||||||| | ||||||||||||    
T  19786315 aaaagtcattctcatgacttcatcgtagaatttttct 19786279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 7e-20; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 4318943 - 4319005
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4318943 ttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 4319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 5627457 - 5627393
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||||    
T  5627457 attttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccttagaatttt 5627393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 7055333 - 7055397
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||| ||||||    
T  7055333 attttttatgttatagtgttaacttcaccaaaaaaatcattcttatgacttcaccataaaatttt 7055397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 30353478 - 30353542
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||| |||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  30353478 ttttgatgttataatgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttttc 30353542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 8513289 - 8513235
Alignment:
Q  308 ttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  8513289 ttatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 8513235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 20768150 - 20768088
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  20768150 ttttgatgctatagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20768088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 1945901 - 1945826
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaa-gtcattctcatgacttcaccatagaatttttctaatttt 371  Q
    ||||||| ||||||| ||||| |||||||||||||| |||||||| ||||||||||| ||||||||| || |||||    
T  1945901 catttttgatgttatagtgttaacttcaccaaaaaaagtcattcttatgacttcaccgtagaattttccttatttt 1945826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 6088959 - 6088908
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||||||||    
T  6088959 gtgttaacttcaccagaaaaatcattctcatgacttcaccatagaatttttc 6088908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 7235154 - 7235216
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||  ||||||||||||||| ||||||||||||||||||    
T  7235154 ttttgatgttatagtgttgacttcaccggaaaagtcattctcataacttcaccatagaatttt 7235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 29182227 - 29182162
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    |||| ||||||| ||||| |||||| ||| ||| |||||||||||||||||||||| |||||||||    
T  29182227 ttttgatgttatagtgttaacttcatcaataaaatcattctcatgacttcaccataaaatttttct 29182162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 3880073 - 3880121
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||||||||    
T  3880073 tgttaacttcaccagaaaagtcattctcgtgacttcaccatagaatttt 3880121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 3005396 - 3005439
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||||||||||||||||||||||||| |||||||||||    
T  3005396 acttcatcaaaaaagtcattctcatgacttcaacatagaatttt 3005439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 19631794 - 19631751
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||||||||||| |||||||||||||||||||||    
T  19631794 acttcaccagaaaagtcattcttatgacttcaccatagaatttt 19631751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 371
Target Start/End: Complemental strand, 30338521 - 30338469
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaatttt 371  Q
    ||||||| ||||||||||||||||  |||||| ||||||||||||||| ||||    
T  30338521 acttcactaaaaaagtcattctcacaacttcatcatagaatttttctactttt 30338469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 21017246 - 21017297
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    |||| |||||||||||||||||||| || |||||||||| || |||||||||    
T  21017246 tgttaacttcaccaaaaaagtcattttcgtgacttcaccgtataatttttct 21017297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 6614039 - 6614085
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    ||||||||| |||||||||||| |||| ||||||||| |||||||||    
T  6614039 acttcaccagaaaagtcattcttatgatttcaccatataatttttct 6614085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 33893122 - 33893184
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||| |||||| | ||||| ||||||| |||||||||||||    
T  33893122 ttttgatgttatagtgttaacttcactaaaaaaattattctaatgactttaccatagaatttt 33893184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 18498483 - 18498435
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| |||||||||  |||||||||||||||||||||| ||||| ||||    
T  18498483 tgttaacttcaccaggaaagtcattctcatgacttcactatagattttt 18498435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 15724554 - 15724492
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  15724554 ttttgatgttatagtgttaacttcaccaaaaaagtcattctcataacttcaccatagaatttt 15724492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 14409434 - 14409499
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  14409434 catttttgatgttatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaatttt 14409499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 5112422 - 5112486
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| || || |||||||||||||||||||| |||||||||||||||| ||||||    
T  5112422 attttttatgttatagtattaacttcaccaaaaaagtcattttcatgacttcaccataaaatttt 5112486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 12910416 - 12910352
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||||||| || || |||||||||||||||||||| |||||||||||||||||||||||    
T  12910416 atttttgatgttatagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaatttt 12910352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 368
Target Start/End: Original strand, 25501037 - 25501105
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaat 368  Q
    |||| ||| ||| ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  25501037 ttttgatgctatagtgttaactttaccagaaaagtcattctcatgacttcaccatagaatttttctaat 25501105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 26317793 - 26317857
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||||    
T  26317793 atttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaatttt 26317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 22974192 - 22974255
Alignment:
Q  299 ttttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| ||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  22974192 tttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttcaccatagaatttt 22974255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 8741998 - 8742060
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  8741998 ttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 8742060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 19119923 - 19119861
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  19119923 ttttgatgctatagtgttaacttcaccacaaaagtcattctcatgacttcaccatagaatttt 19119861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 31705719 - 31705784
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| |||||||||||||| ||||| | |||||||||||||||||||||    
T  31705719 catttttgatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaatttt 31705784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 35826591 - 35826656
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| || || ||||||| |||||||||||| |||||||||||||||||||||||    
T  35826591 catttttgatgttatagtattaacttcacaaaaaaagtcattatcatgacttcaccatagaatttt 35826656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 27318595 - 27318662
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    ||||||||||||| | ||||| ||||||||| |||| ||||||||||||||||||| | |||||||||    
T  27318595 cattttttatgttttagtgttaacttcaccagaaaaatcattctcatgacttcaccgttgaatttttc 27318662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 699216 - 699150
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||||||| ||| ||||| |||||| || ||||||||||||||| ||||||||||| ||||||||    
T  699216 attttttatgctatagtgttaacttcatcagaaaagtcattctcataacttcaccataaaatttttc 699150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 7693294 - 7693232
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| |||||||||| | |||||||||||||||||||||    
T  7693294 ttttgatgttatagtgttaacttcaccagaaaagtcattttaatgacttcaccatagaatttt 7693232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 16004484 - 16004550
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtca-ttctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| ||||||||| |||||||| |||||||||||| |||||||||||||    
T  16004484 catttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaatttt 16004550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 27330370 - 27330308
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| ||||||||||| || |||||||||||||||||||    
T  27330370 ttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaatttt 27330308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 31786754 - 31786819
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||| ||| ||||| ||||||||||||||||||||||||  ||||||| ||||||||||    
T  31786754 catttttcatgctatagtgttaacttcaccaaaaaagtcattctcactacttcactatagaatttt 31786819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 39572886 - 39572821
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||| |||| || || |||| || | ||||||||||||||||||||||||||||||||||    
T  39572886 cattttttatattatagtattaacttaactagaaaagtcattctcatgacttcaccatagaatttt 39572821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 1429254 - 1429318
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||| ||| ||||| |||||||||||| ||||||| |||||||||||||||||| ||||    
T  1429254 atttttgatgctatagtgttaacttcaccaaaagagtcattttcatgacttcaccatagattttt 1429318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 22616539 - 22616496
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  22616539 acttcaccagaaaagtcattttcatgacttcaccatagaatttt 22616496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 26411338 - 26411295
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| ||||||| |||||||||||||||||||||    
T  26411338 acttcaccaaaaaaatcattctaatgacttcaccatagaatttt 26411295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 8466809 - 8466747
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||  ||||| ||||||||| |||||||||||||||||| ||| |||||||||||    
T  8466809 ttttgatgttacagtgttaacttcaccagaaaagtcattctcatgacctcatcatagaatttt 8466747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 35933953 - 35933904
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| |||||| ||||||| |||||||||||||||||||||| ||||||    
T  35933953 gtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaatttt 35933904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 36860490 - 36860425
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||  ||| ||||| ||||||||| |||| ||||| || ||||||||||||||||||||    
T  36860490 cattttttatactatagtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaatttt 36860425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 5837599 - 5837555
Alignment:
Q  320 cttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||||| ||||||||||||||||| |||||| |||||||||||    
T  5837599 cttcaccagaaaagtcattctcatgaattcaccgtagaatttttc 5837555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 24886171 - 24886104
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaa--gtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| || || ||||||||||||||  ||||||||||||| ||||||||| ||||||    
T  24886171 catttttgatgttatagtattaacttcaccaaaaaaaagtcattctcatgatttcaccataaaatttt 24886104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 36866828 - 36866764
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| || |||| ||||| ||||||||| |||| ||||| || ||||||||||||||||||||    
T  36866828 atttttgatattatagtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaatttt 36866764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 40133435 - 40133387
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||||    
T  40133435 tgttaacttcaccacaaaagtcattttcgtgacttcaccatagaatttt 40133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 363
Target Start/End: Original strand, 7208971 - 7209038
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaa-aagtcattctcatgacttcaccatagaattttt 363  Q
    ||||||||||||||   |||| |||||||||||| |||||||| | ||||||||||| ||||||||||    
T  7208971 cattttttatgttacaatgttaacttcaccaaaaaaagtcatttttatgacttcaccgtagaattttt 7209038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 26268138 - 26268075
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaattttt 363  Q
    |||| ||| ||| ||||| ||||||||| |||| ||||||||||||||||||  ||||||||||    
T  26268138 ttttgatgctatagtgttaacttcaccagaaaaatcattctcatgacttcactgtagaattttt 26268075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 9200297 - 9200235
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| |||||| ||| | |||||||||||||| ||||||    
T  9200297 ttttgatgttatagtgttaacttcaccagaaaagttattttaatgacttcaccataaaatttt 9200235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 12081284 - 12081322
Alignment:
Q  327 aaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  12081284 aaaaaagtcattctcataacttcaccatataatttttct 12081322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 13380540 - 13380498
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattt 361  Q
    ||||||| | ||||||||||||||||||||||||||| |||||    
T  13380540 acttcactagaaaagtcattctcatgacttcaccataaaattt 13380498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 13956456 - 13956518
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||  | |||||||||| ||||||||||||| |||||||||    
T  13956456 ttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaatttt 13956518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 17158138 - 17158206
Alignment:
Q  297 cattttttatgttattgtgtttacttcac---caaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| |||||||    |||||| ||||| | |||||||||||||||||||||    
T  17158138 cattttttatgttatagtgttaacttcacaaaaaaaaaaatcatttttatgacttcaccatagaatttt 17158206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 23116333 - 23116395
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| |||||||  |||| ||||||  |||||||||||| ||||||| |||||||||||||||    
T  23116333 ttttgatgttataatgttaacttcataaaaaaagtcattttcatgacgtcaccatagaatttt 23116395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 32563213 - 32563151
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||| || |||| ||||| | |||||||||||||||||||||    
T  32563213 ttttgatgttatagtgttaacttcatcagaaaaatcattttaatgacttcaccatagaatttt 32563151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 38528347 - 38528409
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||| || ||||  |||| |||||||||||||||||||||||    
T  38528347 ttttgatgttatagtgttaacttcatcagaaaaaccattttcatgacttcaccatagaatttt 38528409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 5748478 - 5748437
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccata 355  Q
    |||| |||||||||||||||||||| ||||||||||| ||||    
T  5748478 tgttaacttcaccaaaaaagtcattttcatgacttcatcata 5748437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 12164926 - 12164967
Alignment:
Q  326 caaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    ||||||||||||||||||||||||||| || |||||| ||||    
T  12164926 caaaaaagtcattctcatgacttcaccgtaaaattttcctaa 12164967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 22980844 - 22980795
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| ||||||||| ||||||||||||||| |||||| |||| ||||||    
T  22980844 gtgttaacttcaccagaaaagtcattctcataacttcatcataaaatttt 22980795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 33163554 - 33163513
Alignment:
Q  323 caccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  33163554 caccgaaaaaatcattttcatgacttcaccatagaatttttc 33163513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 43308790 - 43308818
Alignment:
Q  327 aaaaaagtcattctcatgacttcaccata 355  Q
    |||||||||||||||||||||||||||||    
T  43308790 aaaaaagtcattctcatgacttcaccata 43308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 7e-17; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 17054232 - 17054297
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| || || ||||||||||||||||||||| ||||||||||||||||||||||    
T  17054232 catttttgatgttatagtattaacttcaccaaaaaagtcattcgcatgacttcaccatagaatttt 17054297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 17071873 - 17071938
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||  |||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  17071873 catttttgttgttatagtgttaacttcaccaaaaaagtcattcgcatgacttcaccatagaatttt 17071938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 33551122 - 33551187
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||    
T  33551122 catttttgatgttatagtgttaacttcactaaaaaagtcattctcatgacttcaccgtagaatttt 33551187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 366
Target Start/End: Complemental strand, 41643917 - 41643870
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttcta 366  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  41643917 acttcaccaaaaaagtcattatcatgacttcaccatagaatttttcta 41643870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 11366517 - 11366582
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||| ||||||| ||||| | |||||||||||||||||||| |||| ||||||||||||||||    
T  11366517 catttttgatgttatagtgttaatttcaccaaaaaagtcattcttatgatttcaccatagaatttt 11366582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 41465560 - 41465511
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  41465560 gtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 41465511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 29242275 - 29242339
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| || || ||||||||||||||  |||| |||||||||||||||||||||||    
T  29242275 attttttatgttatagttttaacttcaccaaaaaaaccattttcatgacttcaccatagaatttt 29242339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 36642029 - 36641985
Alignment:
Q  321 ttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  36642029 ttcaccagaaaagtcattctcatgacttcaccatagaatttttct 36641985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 41464008 - 41464056
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  41464008 acttcaccaaaaatgtcattctcacgacttcaccatagaatttttctaa 41464056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 43446465 - 43446513
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  43446465 acttcaccgaaaaagtcattctcatgacttcaccatagaattttcctaa 43446513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 43770978 - 43771041
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||| ||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||||    
T  43770978 ttttgatgttatagtgttaacttcaccaaaaaa-tcattctaatgacttcaccatagaatttttc 43771041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 31861940 - 31861897
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  31861940 acttcaccaaaaaagtcattctcataacttcaccatagaatttt 31861897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 19424767 - 19424829
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| ||||||||| ||||| ||||||||||||||||||||| ||||||    
T  19424767 ttttgatgttatagtgttaacttcaccagaaaagccattctcatgacttcaccataaaatttt 19424829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 7007051 - 7007096
Alignment:
Q  322 tcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  7007051 tcaccaaaaaaatcattctcatgacttcaccatagaattttcctaa 7007096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 35958976 - 35958911
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| |||   |||||||||||||||||||| | ||||||||| |||||||||||    
T  35958976 cattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttcatcatagaatttt 35958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 37905775 - 37905711
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| | || ||||||||||||||||||    
T  37905775 cattttttatgttatagtgttaacttcaccaaaaaa-tcatttttataacttcaccatagaatttt 37905711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 13711514 - 13711466
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||||| |||||||||||| |||||||||||||||||||||    
T  13711514 tgttaacttcaccagaaaagtcattctgatgacttcaccatagaatttt 13711466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 19313902 - 19313854
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||||| |||||||||||| |||||||||||||||||||||    
T  19313902 tgttaacttcaccagaaaagtcattctaatgacttcaccatagaatttt 19313854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 34441924 - 34441967
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  34441924 actttaccaaaaaagtcattttcatgacttcaccatagaatttt 34441967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 42005434 - 42005391
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  42005434 acttcaccaaaaaaatcattttcatgacttcaccatagaatttt 42005391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 18494407 - 18494469
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| ||||||||| |||||||||| |||||||||||||| ||||||||    
T  18494407 ttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaatttt 18494469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 26357641 - 26357579
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||| || |||||||||| |||||||||||||||| ||||||    
T  26357641 ttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcaccataaaatttt 26357579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 31570873 - 31570935
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| | ||||||| |||||| |||||||| ||||||||||||||||||    
T  31570873 ttttaatgttatagtgttaatttcaccagaaaagttattctcataacttcaccatagaatttt 31570935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 33902133 - 33902070
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||  ||||| ||||||||| |||||||||||| | ||||||| |||||||||||    
T  33902133 cattttttatgtta--gtgttaacttcaccagaaaagtcattctaacgacttcatcatagaatttt 33902070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 41960947 - 41960885
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||| ||||| |||||| |||||||||||||   |||||||||||||||||||||    
T  41960947 ttttgatgttatagtgttaacttcatcaaaaaagtcatttctatgacttcaccatagaatttt 41960885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 4166972 - 4166924
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||||    
T  4166972 tgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 4166924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 33660507 - 33660571
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||| ||||||| ||||| |||| || | |||||||||| | |||||||||||||||||||||||    
T  33660507 ttttgatgttatagtgttaacttaactagaaaagtcattttaatgacttcaccatagaatttttc 33660571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 6177820 - 6177777
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| ||||||||||||||||||||| || |||||||||    
T  6177820 acttcaccagaaaagtcattctcatgacttcgccgtagaatttt 6177777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 18514774 - 18514817
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||    
T  18514774 acttcatcaaaaaagtcattctcatgacttcactataaaatttt 18514817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 19093458 - 19093415
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||    
T  19093458 acttcaccagaaaaatcattctcatgacttcaccataaaatttt 19093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 58067 - 58025
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaattt 361  Q
    |||||| |||||||||||||||||| | |||||||||||||||    
T  58067 acttcatcaaaaaagtcattctcataatttcaccatagaattt 58025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 4264216 - 4264278
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| ||| ||| ||||| |||| |||| |||||||||| | |||||||||||||||||||||    
T  4264216 ttttgatgctatagtgttaactttaccagaaaagtcattatgatgacttcaccatagaatttt 4264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 2325514 - 2325571
Alignment:
Q  305 atgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||||  |||| ||||||| | ||||||||||| ||| ||||||||||||||||||    
T  2325514 atgttatattgttaacttcacgagaaaagtcattcacataacttcaccatagaatttt 2325571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 18947601 - 18947642
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatt 360  Q
    ||||||||| |||||| ||| |||||||||||||||||||||    
T  18947601 acttcaccagaaaagttattttcatgacttcaccatagaatt 18947642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 30844889 - 30844844
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    ||||||||  ||||||||||||||| |||||||||||||| |||||    
T  30844889 acttcaccttaaaagtcattctcataacttcaccatagaacttttc 30844844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 39167511 - 39167564
Alignment:
Q  309 tattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| |||| |||||| ||||||| |||||||| ||||||||||||| ||||||    
T  39167511 tattctgttaacttcatcaaaaaaatcattctcgtgacttcaccataaaatttt 39167564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 39788580 - 39788637
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaattttgttat 376  Q
    ||||||| | |||||||||||| |||||||||||||| |||||| ||| |||| ||||    
T  39788580 acttcactagaaaagtcattcttatgacttcaccataaaattttcctactttttttat 39788637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 3177006 - 3176938
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    ||||||| || |||| || || |||||| || |||||||||| || | |||||||||||||||||||||    
T  3177006 catttttgatattatagtattaacttcatcagaaaagtcattttcgtaacttcaccatagaatttttct 3176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 4763678 - 4763630
Alignment:
Q  314 tgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||| |||||| || |||||||||| ||||||||||| |||||||||||    
T  4763678 tgttaacttcatcagaaaagtcattttcatgacttcatcatagaatttt 4763630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 19073403 - 19073359
Alignment:
Q  319 acttcaccaaaaaag-tcattctcatgacttcaccatagaatttt 362  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||    
T  19073403 acttcaccaaaaaaaatcattctcataacttcaccatagaatttt 19073359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 19289460 - 19289519
Alignment:
Q  298 attttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| ||||||| ||||| |||||| ||||||||||||     ||||||||||||||||||||    
T  19289460 atttttgatgttatagtgttaacttcatcaaaaaagtcat-----tgacttcaccatagaatttt 19289519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 100886 - 100823
Alignment:
Q  299 ttttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| ||||||| | ||| |||||||||||||| |||||||||||||||||||||||||||||    
T  100886 tttttgatgttatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaatttt 100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 300 - 367
Target Start/End: Complemental strand, 42412 - 42345
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    |||| ||||||| ||||| ||||||||| |||| | |||||||||||||||||||| |||||| ||||    
T  42412 ttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaattttcctaa 42345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 7951 - 7886
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttct 365  Q
    |||| ||||||| ||||| |||||| ||||||||||||||| || |||||||||||||||||||||    
T  7951 ttttgatgttatagtgttaacttcatcaaaaaagtcattcttataacttcaccatagaatttttct 7886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 146134 - 146201
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    |||||||||||||||  |||| |||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  146134 cattttttatgttataatgttaacttaaccaaaaaaatcattcttatgacttcaccgtagaatttttc 146201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 11971 - 11906
Alignment:
Q  300 tttttatgttattgtgtttacttcaccaaaaaagtcatt-ctcatgacttcaccatagaatttttc 364  Q
    |||| ||||||| ||||| | ||||||| |||||||||| ||||||||||||||||||||||||||    
T  11971 ttttaatgttatggtgttaatttcaccagaaaagtcatttctcatgacttcaccatagaatttttc 11906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 44024 - 43957
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    ||||||| || |||| | ||| ||||||||||||||||| |||| | |||||||||||||||||||||    
T  44024 catttttgatattatagcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttttc 43957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 154763 - 154830
Alignment:
Q  297 cattttttatgttattgtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 364  Q
    ||||||| || |||| | ||| ||||||||||||||||| |||| | |||||||||||||||||||||    
T  154763 catttttgatattatagcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttttc 154830  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 367
Target Start/End: Complemental strand, 185 - 131
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttttctaa 367  Q
    ||||| ||||||||| |||||||||| || |||||||||||||||||||| ||||    
T  185 gtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcctaa 131  T

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Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 408703 - 408752
Alignment:
Q  313 gtgtttacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||| |||||||||||||| ||||| | |||||||||||||||||||||    
T  408703 gtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaatttt 408752  T

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Target: scaffold0312 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 9138 - 9181
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    |||||| |||||||||||||||||| |||||| |||||||||||    
T  9138 acttcagcaaaaaagtcattctcataacttcatcatagaatttt 9181  T

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Target: scaffold0262 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 12141 - 12184
Alignment:
Q  319 acttcaccaaaaaagtcattctcatgacttcaccatagaatttt 362  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||    
T  12141 acttcaccagaaaagtcattctcataacttcatcatagaatttt 12184  T

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