View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5097_high_20 (Length: 207)
Name: NF5097_high_20
Description: NF5097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5097_high_20 |
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Alignment Details
Target: chr3 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 53147460 - 53147607
Alignment:
| Q |
17 |
cataggatcccatttctgtgactacaagcaattatnnnnnnnntatatatgtcggtatgttttatttaaaagcattgtttagaaaataatcctattttat |
116 |
Q |
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| T |
53147460 |
cataggatcccatttctgtgactacaagcaattataaaaaatatatatatgtcggtatgttttatttaaaagcattgtttagaaaataatcctattttat |
53147559 |
T |
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| Q |
117 |
aaataattttatttaattatgcactactataaaagataaggtggtccc |
164 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53147560 |
aaataattttatttaattatgcactactataaaagataaggtggtccc |
53147607 |
T |
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