View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5097_low_15 (Length: 235)
Name: NF5097_low_15
Description: NF5097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5097_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 33768690 - 33768912
Alignment:
| Q |
1 |
ttgattccataatcgatttctcttctgctaaaagctcttccattaaatcggtgaaaccgaaccacattttaccgtcggtgtggcggtaggtttggaagag |
100 |
Q |
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| T |
33768690 |
ttgattccataatcgatttctcttctgctaaaagctcttccattaaatcggtgaaaccgaaccacattttaccgtcggtgtggcggtaggttaggaagag |
33768789 |
T |
|
| Q |
101 |
gagaggatgttgctggattgatttggcaattttccggccgcgggggaaaccgagttcgcggtggagttttccggcgtcgtcgagttgaagaacgtgttcc |
200 |
Q |
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| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33768790 |
gggaggatgttgctggattgatttggcaattttccggccgcgagggaaaccgagttcgcggtggagttttccggcgtcgtcgagttgaagaacgtgttcc |
33768889 |
T |
|
| Q |
201 |
ggttgattagagaggtagttttt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
33768890 |
ggttgattagagaggtagttttt |
33768912 |
T |
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