View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5100_low_7 (Length: 259)
Name: NF5100_low_7
Description: NF5100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5100_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 13472551 - 13472305
Alignment:
| Q |
1 |
ctaagatttaaatatgtctccacctatctcttattgtatgtttccatgtaaacgacgtaaaatccgctgtattgattcatggcggacccaaagcaagtgc |
100 |
Q |
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| T |
13472551 |
ctaagatttaaatatgtctccacctatctcttattgtatgtttccatgtaaacgacgtaaaatccgctgtatcgattcatggcggacccaaagcaagtgc |
13472452 |
T |
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| Q |
101 |
aaccaggccaattgtggtctcaaaaaatgttggggactcaattatttatttattttgaaatcctaactaactgaacttaatcctagcacatagagagaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |
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| T |
13472451 |
aaccaggccaattgtggtctcaaaaaatgttggggactcaattatttatttattttgaaatcctaactaactgaacttaatcct--cacaaagagagaat |
13472354 |
T |
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| Q |
201 |
taattatccgtagaggatgtaactaacaaagatataaagattgatgatg |
249 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
13472353 |
taattacccgtagaggatgtaactaacaaagatataaagattgatgatg |
13472305 |
T |
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