View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5103_high_21 (Length: 260)
Name: NF5103_high_21
Description: NF5103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5103_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 6011855 - 6011621
Alignment:
| Q |
9 |
gcaatgacctcctcaacataaggcaatcctggagcagttgttccccaggttctagctattctttcttctttgttatgcttgtagatttcaatgctgcaaa |
108 |
Q |
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| T |
6011855 |
gcaatgacctcctcaacataaggcaatcctggagcagttgttccccaggttctagctattctttcttctttgttatgcttgtagatttcaatgctgcaaa |
6011756 |
T |
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| Q |
109 |
gaagttaaattaatgttcattggttaatgaaaaaggaaaactcagagacaccatgacaggagtttacttaaatagtcataaccattgtaattcaaaaatt |
208 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6011755 |
gaagttaaattaatgttcattggttaatgaaaaatgaaaactcagagacaccatgacaggagtttacttaaatagtcataaccattgtaattcaaaaatt |
6011656 |
T |
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| Q |
209 |
gaacgtgctaaaaaatggacggttcaaccagttaa |
243 |
Q |
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||||||||||||| |||||| |||||||||||||| |
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| T |
6011655 |
gaacgtgctaaaatatggacagttcaaccagttaa |
6011621 |
T |
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