View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5103_high_36 (Length: 206)
Name: NF5103_high_36
Description: NF5103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5103_high_36 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 23377037 - 23376861
Alignment:
| Q |
18 |
agctctctacttcttcatcatcttctcttcattcacattccataattcccacatggaattccaaaaactactactctttcaaaccacccacttcagctaa |
117 |
Q |
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| T |
23377037 |
agctctctacttcttcatcatcttctcttcattcacattccataattcccacatggaattccaaaaactactactctttcaaaccacccatttcagctaa |
23376938 |
T |
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| Q |
118 |
gtccacaaccccaaaatcttccaaacggtttggttcaattgggctgcaccatcatcatcacacaagtttctctgctc |
194 |
Q |
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| T |
23376937 |
gtccacaaccccaaaatcttccaaacggtttggttcaattgggctgcaccatcatcatcacacaagtttctctgctc |
23376861 |
T |
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