View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5103_low_16 (Length: 298)

Name: NF5103_low_16
Description: NF5103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5103_low_16
NF5103_low_16
[»] chr3 (53 HSPs)
chr3 (116-258)||(51219319-51219461)
chr3 (1-73)||(3150249-3150321)
chr3 (1-72)||(38193530-38193601)
chr3 (1-71)||(46310456-46310526)
chr3 (1-70)||(41979372-41979441)
chr3 (1-70)||(46308807-46308876)
chr3 (1-70)||(53094293-53094362)
chr3 (1-70)||(53187742-53187811)
chr3 (1-70)||(54900094-54900163)
chr3 (1-70)||(46611323-46611392)
chr3 (1-70)||(54898437-54898506)
chr3 (1-69)||(2379003-2379071)
chr3 (1-71)||(53190834-53190904)
chr3 (1-70)||(2226227-2226296)
chr3 (1-70)||(30598337-30598406)
chr3 (1-70)||(38191895-38191964)
chr3 (1-70)||(44795910-44795979)
chr3 (1-64)||(2660218-2660281)
chr3 (1-71)||(23291569-23291639)
chr3 (1-70)||(27899156-27899225)
chr3 (1-70)||(28626411-28626480)
chr3 (1-70)||(44794208-44794276)
chr3 (1-70)||(46609149-46609218)
chr3 (1-70)||(53092623-53092692)
chr3 (1-73)||(611242-611314)
chr3 (1-65)||(2661928-2661992)
chr3 (1-68)||(43765139-43765206)
chr3 (1-70)||(3152293-3152362)
chr3 (1-70)||(7883328-7883397)
chr3 (1-70)||(21348723-21348792)
chr3 (1-70)||(35903825-35903894)
chr3 (1-70)||(41977750-41977819)
chr3 (1-70)||(44267981-44268050)
chr3 (1-67)||(42282493-42282559)
chr3 (9-70)||(7884927-7884988)
chr3 (1-70)||(30599993-30600062)
chr3 (1-70)||(51686414-51686483)
chr3 (1-57)||(35905787-35905843)
chr3 (1-72)||(17515308-17515379)
chr3 (1-60)||(17516993-17517052)
chr3 (1-72)||(46112485-46112556)
chr3 (1-70)||(51684610-51684679)
chr3 (5-67)||(54412571-54412633)
chr3 (1-70)||(23293245-23293314)
chr3 (1-70)||(48829356-48829425)
chr3 (1-73)||(21350625-21350697)
chr3 (7-67)||(2377032-2377092)
chr3 (31-70)||(600725-600764)
chr3 (7-70)||(27897151-27897214)
chr3 (250-281)||(51220661-51220692)
chr3 (1-70)||(46114125-46114195)
chr3 (1-29)||(19987669-19987697)
chr3 (33-73)||(43767068-43767108)
[»] chr4 (31 HSPs)
chr4 (1-70)||(319273-319342)
chr4 (1-70)||(4173760-4173829)
chr4 (1-70)||(33264382-33264451)
chr4 (1-70)||(43507167-43507236)
chr4 (1-70)||(43508673-43508742)
chr4 (1-70)||(43519424-43519493)
chr4 (1-70)||(51013906-51013975)
chr4 (1-71)||(4169685-4169755)
chr4 (1-75)||(48645250-48645324)
chr4 (1-70)||(320920-320989)
chr4 (1-70)||(49524753-49524822)
chr4 (1-70)||(35401749-35401818)
chr4 (1-70)||(833223-833292)
chr4 (1-70)||(5439667-5439736)
chr4 (1-70)||(33266030-33266099)
chr4 (1-60)||(39345574-39345633)
chr4 (1-67)||(41761801-41761867)
chr4 (1-71)||(51011925-51011995)
chr4 (1-70)||(5437811-5437880)
chr4 (1-70)||(41781539-41781608)
chr4 (1-69)||(49523125-49523193)
chr4 (1-70)||(835062-835131)
chr4 (1-66)||(11254123-11254188)
chr4 (1-70)||(20493827-20493896)
chr4 (1-70)||(42982472-42982541)
chr4 (1-70)||(48813787-48813856)
chr4 (1-65)||(43521129-43521193)
chr4 (1-70)||(35404500-35404569)
chr4 (1-69)||(20819986-20820054)
chr4 (1-51)||(52868204-52868254)
chr4 (1-77)||(2693307-2693383)
[»] chr1 (43 HSPs)
chr1 (1-70)||(26223587-26223656)
chr1 (1-70)||(46583611-46583680)
chr1 (1-72)||(8167940-8168011)
chr1 (1-71)||(2869578-2869648)
chr1 (1-67)||(33602699-33602765)
chr1 (1-71)||(46582009-46582079)
chr1 (1-70)||(25278423-25278492)
chr1 (1-70)||(34776569-34776638)
chr1 (1-70)||(37344342-37344411)
chr1 (3-70)||(4854410-4854477)
chr1 (9-70)||(8169596-8169657)
chr1 (1-70)||(9120039-9120108)
chr1 (1-70)||(25276742-25276811)
chr1 (1-70)||(31236819-31236888)
chr1 (1-70)||(37345982-37346051)
chr1 (2-69)||(6816866-6816933)
chr1 (1-72)||(34778193-34778264)
chr1 (1-75)||(27089299-27089373)
chr1 (1-71)||(47013137-47013207)
chr1 (1-71)||(52641887-52641957)
chr1 (1-70)||(4856021-4856090)
chr1 (1-70)||(27087283-27087352)
chr1 (8-69)||(50554164-50554225)
chr1 (1-72)||(9121723-9121794)
chr1 (8-71)||(33599186-33599249)
chr1 (1-71)||(2871096-2871166)
chr1 (1-75)||(25278849-25278923)
chr1 (1-59)||(33599229-33599287)
chr1 (1-70)||(3013531-3013600)
chr1 (1-70)||(31238550-31238619)
chr1 (1-70)||(37088156-37088225)
chr1 (1-70)||(47011456-47011525)
chr1 (1-72)||(50556152-50556223)
chr1 (7-69)||(1442551-1442613)
chr1 (1-67)||(3011858-3011924)
chr1 (1-67)||(52643670-52643736)
chr1 (1-70)||(25279008-25279077)
chr1 (10-70)||(45044949-45045009)
chr1 (9-71)||(1444209-1444271)
chr1 (1-70)||(6818733-6818802)
chr1 (1-70)||(51896207-51896276)
chr1 (1-67)||(51894570-51894636)
chr1 (1-71)||(23577635-23577705)
[»] chr5 (29 HSPs)
chr5 (1-71)||(2852885-2852955)
chr5 (3-71)||(2854383-2854451)
chr5 (1-72)||(21843012-21843083)
chr5 (1-70)||(24541267-24541336)
chr5 (1-70)||(30463900-30463969)
chr5 (1-70)||(17574318-17574387)
chr5 (1-70)||(36057668-36057737)
chr5 (1-73)||(34328847-34328919)
chr5 (1-71)||(2179786-2179856)
chr5 (1-70)||(7269466-7269535)
chr5 (1-70)||(8541291-8541360)
chr5 (1-70)||(12738756-12738825)
chr5 (1-70)||(12801579-12801648)
chr5 (2-67)||(28822111-28822176)
chr5 (1-70)||(29620138-29620207)
chr5 (1-70)||(40782231-40782300)
chr5 (1-68)||(17577955-17578022)
chr5 (1-72)||(42471546-42471617)
chr5 (1-71)||(29621836-29621906)
chr5 (1-67)||(40780553-40780619)
chr5 (1-70)||(7267843-7267912)
chr5 (1-70)||(8539675-8539744)
chr5 (1-70)||(42473662-42473731)
chr5 (1-73)||(34327632-34327704)
chr5 (1-70)||(30468335-30468404)
chr5 (1-75)||(28813785-28813861)
chr5 (1-74)||(41493840-41493913)
chr5 (29-72)||(28819346-28819389)
chr5 (1-60)||(43492153-43492212)
[»] chr8 (44 HSPs)
chr8 (1-70)||(27691154-27691223)
chr8 (1-70)||(29237151-29237220)
chr8 (1-70)||(35509214-35509283)
chr8 (1-70)||(38548851-38548920)
chr8 (1-69)||(33707207-33707275)
chr8 (1-71)||(601724-601794)
chr8 (1-70)||(27692857-27692926)
chr8 (1-70)||(33762733-33762802)
chr8 (1-70)||(35510839-35510908)
chr8 (1-73)||(29239207-29239279)
chr8 (1-70)||(8608237-8608307)
chr8 (1-71)||(13282477-13282547)
chr8 (1-70)||(13106804-13106873)
chr8 (1-70)||(33761069-33761138)
chr8 (1-70)||(34681086-34681155)
chr8 (1-70)||(42943446-42943515)
chr8 (1-67)||(13284015-13284081)
chr8 (1-70)||(8609862-8609931)
chr8 (1-70)||(26238726-26238795)
chr8 (1-70)||(33708879-33708947)
chr8 (2-71)||(13484544-13484613)
chr8 (1-70)||(15308281-15308350)
chr8 (1-70)||(15488650-15488719)
chr8 (11-75)||(600755-600819)
chr8 (1-69)||(5036446-5036514)
chr8 (1-72)||(41823888-41823959)
chr8 (1-67)||(27404213-27404279)
chr8 (1-67)||(42941777-42941843)
chr8 (1-70)||(5038082-5038150)
chr8 (1-70)||(13108411-13108480)
chr8 (1-70)||(38547228-38547297)
chr8 (1-73)||(22273911-22273983)
chr8 (1-72)||(7745187-7745258)
chr8 (1-70)||(13486174-13486243)
chr8 (1-70)||(27406972-27407041)
chr8 (1-70)||(22272334-22272405)
chr8 (1-67)||(26242389-26242455)
chr8 (1-67)||(41825719-41825785)
chr8 (1-70)||(41042659-41042728)
chr8 (1-70)||(43262157-43262226)
chr8 (1-67)||(9671980-9672046)
chr8 (11-52)||(15305815-15305856)
chr8 (11-52)||(15486184-15486225)
chr8 (9-70)||(41040720-41040781)
[»] chr7 (41 HSPs)
chr7 (1-70)||(27666120-27666189)
chr7 (1-70)||(29996569-29996638)
chr7 (1-70)||(56330-56399)
chr7 (1-70)||(35403639-35403708)
chr7 (1-71)||(35401968-35402038)
chr7 (1-67)||(39857648-39857714)
chr7 (1-70)||(78034-78103)
chr7 (10-69)||(29994907-29994966)
chr7 (1-72)||(39859284-39859355)
chr7 (1-75)||(24226576-24226650)
chr7 (1-71)||(37113940-37114010)
chr7 (1-70)||(13169703-13169772)
chr7 (1-70)||(20479739-20479808)
chr7 (1-70)||(23904583-23904652)
chr7 (1-70)||(38474198-38474267)
chr7 (1-73)||(47384291-47384363)
chr7 (1-67)||(27664433-27664499)
chr7 (1-70)||(20478042-20478111)
chr7 (1-66)||(35691431-35691496)
chr7 (1-70)||(47386264-47386333)
chr7 (1-72)||(46437105-46437176)
chr7 (1-67)||(6605417-6605483)
chr7 (1-71)||(37115581-37115651)
chr7 (1-67)||(48227961-48228027)
chr7 (1-70)||(38549547-38549616)
chr7 (1-70)||(45361296-45361365)
chr7 (1-67)||(24228464-24228530)
chr7 (1-70)||(22155867-22155936)
chr7 (1-70)||(22211782-22211851)
chr7 (9-70)||(23906295-23906356)
chr7 (1-70)||(45359336-45359405)
chr7 (1-72)||(34774996-34775067)
chr7 (1-61)||(13039662-13039722)
chr7 (1-67)||(34776970-34777036)
chr7 (1-67)||(37796236-37796302)
chr7 (1-70)||(6602335-6602404)
chr7 (1-70)||(30940480-30940549)
chr7 (1-48)||(13168142-13168189)
chr7 (39-70)||(35693434-35693465)
chr7 (1-67)||(13018036-13018102)
chr7 (1-71)||(46439553-46439623)
[»] chr2 (29 HSPs)
chr2 (1-72)||(14387347-14387418)
chr2 (1-70)||(16763076-16763145)
chr2 (1-70)||(16764631-16764700)
chr2 (1-67)||(19906685-19906751)
chr2 (1-70)||(14389159-14389228)
chr2 (1-70)||(16376736-16376805)
chr2 (1-70)||(24205598-24205667)
chr2 (1-70)||(39663154-39663223)
chr2 (1-70)||(40561898-40561967)
chr2 (1-75)||(44709820-44709894)
chr2 (1-70)||(2766934-2767003)
chr2 (1-74)||(19581410-19581483)
chr2 (1-70)||(34400314-34400383)
chr2 (1-70)||(37022205-37022274)
chr2 (1-70)||(39664823-39664892)
chr2 (1-72)||(19908321-19908393)
chr2 (11-70)||(6783364-6783423)
chr2 (9-70)||(2577508-2577569)
chr2 (1-70)||(24208117-24208186)
chr2 (9-70)||(37020508-37020569)
chr2 (1-70)||(40560223-40560292)
chr2 (8-72)||(17696204-17696268)
chr2 (11-70)||(6786066-6786125)
chr2 (1-67)||(6799428-6799494)
chr2 (1-70)||(39456800-39456869)
chr2 (25-70)||(42517558-42517603)
chr2 (1-70)||(39455169-39455238)
chr2 (9-66)||(42519289-42519346)
chr2 (1-70)||(6797507-6797576)
[»] scaffold0058 (3 HSPs)
scaffold0058 (1-75)||(3289-3363)
scaffold0058 (1-75)||(4461-4535)
scaffold0058 (1-70)||(14363-14432)
[»] chr6 (28 HSPs)
chr6 (1-71)||(32518517-32518587)
chr6 (1-70)||(13613637-13613706)
chr6 (1-70)||(32455946-32456015)
chr6 (2-70)||(32437140-32437208)
chr6 (1-71)||(18645124-18645193)
chr6 (1-70)||(3480677-3480746)
chr6 (1-70)||(9400055-9400124)
chr6 (1-70)||(13610690-13610759)
chr6 (1-70)||(32439146-32439215)
chr6 (9-70)||(32516877-32516938)
chr6 (4-71)||(6902920-6902987)
chr6 (8-71)||(11357221-11357284)
chr6 (1-70)||(7371175-7371244)
chr6 (1-70)||(32454248-32454317)
chr6 (1-73)||(10569939-10570011)
chr6 (9-69)||(11355223-11355283)
chr6 (1-67)||(7373013-7373079)
chr6 (7-72)||(8605351-8605416)
chr6 (1-70)||(20525354-20525423)
chr6 (1-69)||(20523367-20523435)
chr6 (1-52)||(3456766-3456817)
chr6 (1-70)||(6899485-6899554)
chr6 (1-66)||(10568403-10568468)
chr6 (1-70)||(7051265-7051334)
chr6 (1-67)||(21068628-21068694)
chr6 (9-66)||(7049790-7049847)
chr6 (1-66)||(33276805-33276870)
chr6 (32-67)||(21091109-21091144)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-70)||(54278-54347)
[»] scaffold0345 (1 HSPs)
scaffold0345 (8-71)||(1582-1645)
[»] scaffold1712 (1 HSPs)
scaffold1712 (1-70)||(982-1051)
[»] scaffold0564 (1 HSPs)
scaffold0564 (1-68)||(8264-8331)
[»] scaffold1454 (1 HSPs)
scaffold1454 (9-67)||(1266-1324)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-73)||(436262-436334)


Alignment Details
Target: chr3 (Bit Score: 131; Significance: 5e-68; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 116 - 258
Target Start/End: Original strand, 51219319 - 51219461
Alignment:
Q  116 caattgagtgttttttaaattttcttggagcctcctccctcccatgtagggaattatttttctcccaatttttgggttttcctcatccttttcatactat 215  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51219319 caattgagtgttttttagattttcttggagcctcctccctaccatgtggggaattatttttctcccaatttttgggttttcctcatccttttcatactat 51219418  T
Q  216 aattaactttacatctcaattgtgtcgtgattctttaaatttt 258  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51219419 aattaactttacatctcaattgtgtcgtgattctttaaatttt 51219461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3150321 - 3150249
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3150321 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 3150249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 38193530 - 38193601
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38193530 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 38193601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 46310456 - 46310526
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46310456 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtattagtct 46310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41979372 - 41979441
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41979372 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 41979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46308876 - 46308807
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46308876 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 53094293 - 53094362
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  53094293 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 53187811 - 53187742
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53187811 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 54900094 - 54900163
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54900094 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46611323 - 46611392
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  46611323 tatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgaggtattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54898506 - 54898437
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  54898506 tatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2379003 - 2379071
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2379003 tattttgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 53190834 - 53190904
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  53190834 tatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 53190904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2226227 - 2226296
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  2226227 tatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30598406 - 30598337
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  30598406 tatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38191964 - 38191895
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  38191964 tatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44795910 - 44795979
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  44795910 tatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2660281 - 2660218
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggta 64  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  2660281 tatttcgcaaaattcagggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23291639 - 23291569
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  23291639 tatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaaggtattagtct 23291569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27899156 - 27899225
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  27899156 tatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28626480 - 28626411
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  28626480 tatttcgaataattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44794276 - 44794208
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  44794276 tatttcgcaaaattcagggatgaaattggccgatttt-caaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46609218 - 46609149
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  46609218 tatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 53092692 - 53092623
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| || ||||||||||||| || |||||||||||||||||||||    
T  53092692 tatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 611242 - 611314
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    ||||||| |||||||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  611242 tatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtctat 611314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2661928 - 2661992
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtat 65  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  2661928 tatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43765206 - 43765139
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattag 68  Q
    ||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  43765206 tatttcgcaaaattccggaacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3152293 - 3152362
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| |||||  |||||||||||||||||    
T  3152293 tatttcgcaaaattcagggatgaaattggccgatttttcaaaatttaaggataaatttgaggtattagtc 3152362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7883397 - 7883328
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  7883397 tatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtattagtc 7883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21348792 - 21348723
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||    
T  21348792 tatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35903894 - 35903825
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||||||| ||||||| | ||||||||||||||||||||| |||||||||||||||||    
T  35903894 tattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtc 35903825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41977819 - 41977750
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||| ||||||||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||    
T  41977819 tatttcgccaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44268050 - 44267981
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||| || ||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  44268050 tatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 44267981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42282493 - 42282559
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||  ||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  42282493 tatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 7884927 - 7884988
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30599993 - 30600062
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| || ||| ||||||| | |||||| ||||||||||||||||||||||||    
T  30599993 tatttcgcaaaattcagggacaaatttggccgatttgtaaaaatttaaggacgaatttgaggtattagtc 30600062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51686414 - 51686483
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||| ||||||||| ||| | ||||||| |||||| ||||||||||||||||||||||||    
T  51686414 tatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35905787 - 35905843
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatt 57  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||    
T  35905787 tatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggatgaatt 35905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17515379 - 17515308
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||||||||||||| || ||| ||| || |||||| |||||||||||| ||||||||||||||||||||    
T  17515379 tatttcgcaaaattcagcgatgaatttggccaatttttaaaaattcaaggaagaatttgaggtattagtcta 17515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17516993 - 17517052
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 60  Q
    |||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||||||    
T  17516993 tatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaaggacgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 46112556 - 46112485
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||| ||||||||||   ||||| ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  46112556 tattttgcaaaattcaataacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcta 46112485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 51684679 - 51684610
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||||||| ||| ||| | ||||||| |||||||||||||||||||||| ||||||||    
T  51684679 tattttgcaaaattcagggatgaatttggctgatttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 54412571 - 54412633
Alignment:
Q  5 tcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||| ||||||| |||||| |||||| |||||||| ||||||||||||| |||||    
T  54412571 tcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgagatatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23293245 - 23293314
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| || |||| ||| | |||||||| ||||||||| || |||||||||||||||||    
T  23293245 tatttcgcaaaattcaagggcgaatttggctgatttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48829425 - 48829356
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||| |  || ||| | || |||| |||||||||||||||||||||||||||||||    
T  48829425 tatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtattagtc 48829356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21350625 - 21350697
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    |||||||||||||||||  ||||| ||| ||||||||  |||| ||| ||| |||||||||||||||||||||    
T  21350625 tatttcgcaaaattcagtaacgaatttggccgattttaaaaaaatcacggatgaatttgaggtattagtctat 21350697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 2377092 - 2377032
Alignment:
Q  7 gcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||| |||  | |||||| |||||||||  |||||||||||||||||    
T  2377092 gcaaaattcagggacgaatttggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 600764 - 600725
Alignment:
Q  31 cgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  600764 cgattttttaaaattcaaggatgaatttgaggtattagtc 600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 27897214 - 27897151
Alignment:
Q  7 gcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||| ||||||| |||| | |||||| |||||| ||| | ||||||||||||||||||    
T  27897214 gcaaaattcatggacgaatttgatccattttttaaaatttaagaaagaatttgaggtattagtc 27897151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 281
Target Start/End: Original strand, 51220661 - 51220692
Alignment:
Q  250 ttaaattttccgatgggggatctcatttgtat 281  Q
    ||||||||||||||||||||||||||||||||    
T  51220661 ttaaattttccgatgggggatctcatttgtat 51220692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46114125 - 46114195
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccga-tttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| |||| || ||| |||| ||||| ||||||||||||  ||||||||||| |||||    
T  46114125 tatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaaggataaatttgaggtagtagtc 46114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 19987669 - 19987697
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattga 29  Q
    |||||||||||||||||||||||||||||    
T  19987669 tatttcgcaaaattcagggacgaaattga 19987697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 43767068 - 43767108
Alignment:
Q  33 atttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    ||||| ||||||||| ||| |||||||||||||||||||||    
T  43767068 attttgcaaaattcagggatgaatttgaggtattagtctat 43767108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 319342 - 319273
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  319342 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4173760 - 4173829
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4173760 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4173829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33264451 - 33264382
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33264451 tattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43507236 - 43507167
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43507236 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43508673 - 43508742
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43508673 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43519493 - 43519424
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43519493 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43519424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51013906 - 51013975
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51013906 tattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 51013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4169755 - 4169685
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  4169755 tatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggtattagtct 4169685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48645324 - 48645250
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatta 75  Q
    |||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  48645324 tatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtctatta 48645250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 320920 - 320989
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  320920 tatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 49524753 - 49524822
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  49524753 tattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35401818 - 35401749
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  35401818 tatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 833292 - 833223
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  833292 tatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5439667 - 5439736
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  5439667 tatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 5439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33266030 - 33266099
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||||||| ||||||||    
T  33266030 tatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatattagtc 33266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39345633 - 39345574
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 60  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  39345633 tatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41761801 - 41761867
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||||||||||  |||||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  41761801 tatttcgcaaaatttcgggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 51011995 - 51011925
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||| | | ||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  51011995 tatttcgcaaaattcaagaaagaatttgaccgattttttaaaattcaaggacgaatttgagatattagtct 51011925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5437880 - 5437811
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  5437880 tatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 5437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41781608 - 41781539
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| ||||||||||||||| || ||||||||||||| |||||||||| || |||||||||||||||||    
T  41781608 tattttgcaaaattcagggacaaatttgaccgattttttaaaattcaagaacaaatttgaggtattagtc 41781539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 49523193 - 49523125
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    |||||||||||||||| ||||||| ||  ||||||||| ||||||||| ||||||||||||||||||||    
T  49523193 tatttcgcaaaattcatggacgaatttagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 835062 - 835131
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | ||||||||||| ||||||  |||||||||||||||||||||| | |||||||||||||||    
T  835062 tatttcgaataattcagggacaaaattggtcgatttttcaaaattcaaggactattttgaggtattagtc 835131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11254188 - 11254123
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 66  Q
    |||||||||||||| || |||| | ||| ||||||||| |||||||||||||||||||||||||||    
T  11254188 tatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgaggtatt 11254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20493896 - 20493827
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| | ||||| ||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  20493896 tatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42982472 - 42982541
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||||||  ||||| | |||||||||    
T  42982472 tatttcgcaaaattcagggacgaatttgacagatttttaaaaattcaaggaaaaatttaacgtattagtc 42982541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48813856 - 48813787
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| ||||||||||||||  || ||| | ||||||| |||||||||||||||||||||||||||||||    
T  48813856 tattttgcaaaattcagggataaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 48813787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43521129 - 43521193
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtat 65  Q
    ||||||||||||||||   ||||||||||| |||||||||||||||||| || ||||||||||||    
T  43521129 tatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35404500 - 35404569
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||| | ||||||| ||  ||||||||| |||||||||| | |||| |||||||||||||    
T  35404500 tatttcgcaaaattgaaggacgaatttagccgattttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20820054 - 20819986
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    ||||| |||||||| ||| |  || ||||| ||||||| |||||||||||||||| |||||||||||||    
T  20820054 tattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttgaggtattagt 20819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 52868204 - 52868254
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaagga 51  Q
    |||||||||||||| |  |||||| ||||||||||||| ||||||||||||    
T  52868204 tatttcgcaaaatttatagacgaatttgaccgattttttaaaattcaagga 52868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2693307 - 2693383
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctattact 77  Q
    |||||||||||||| ||| |  || ||| | ||||||| ||||||||| |||||| ||||||||||| ||| |||||    
T  2693307 tatttcgcaaaatttaggaataaatttggctgattttttaaaattcaaagacgaagttgaggtattactcttttact 2693383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26223656 - 26223587
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26223656 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46583611 - 46583680
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46583611 tatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8168011 - 8167940
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8168011 tatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 8167940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2869648 - 2869578
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  2869648 tatttcgcaaaattcagggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtct 2869578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33602699 - 33602765
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33602699 tatttcacaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46582079 - 46582009
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  46582079 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtattagtct 46582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25278423 - 25278492
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  25278423 tatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34776638 - 34776569
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34776638 tatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37344411 - 37344342
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  37344411 tatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 37344342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 4854477 - 4854410
Alignment:
Q  3 tttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  4854477 tttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtattagtc 4854410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 8169596 - 8169657
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8169596 aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9120108 - 9120039
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  9120108 tatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 25276811 - 25276742
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25276811 tatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31236888 - 31236819
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  31236888 tatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37345982 - 37346051
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37345982 tatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtattagtc 37346051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 6816933 - 6816866
Alignment:
Q  2 atttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  6816933 attttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34778193 - 34778264
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    |||||||||||||||||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  34778193 tatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtcta 34778264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27089299 - 27089373
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatta 75  Q
    |||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  27089299 tatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcaatta 27089373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47013137 - 47013207
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  47013137 tatttcgaaaaattcagggacgaaattgtccgatttttcaaaattcaaggactattttgaggtattagtct 47013207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 52641957 - 52641887
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||    
T  52641957 tatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtct 52641887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4856021 - 4856090
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||    
T  4856021 tatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27087352 - 27087283
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||||||    
T  27087352 tatttcgcaaaattcagggacaaatttgaccgattttttaaaatttaaggacgaatttgaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 50554225 - 50554164
Alignment:
Q  8 caaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  50554225 caaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9121723 - 9121794
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  9121723 tatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcta 9121794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 33599249 - 33599186
Alignment:
Q  8 caaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  33599249 caaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtct 33599186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2871096 - 2871166
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||| |||||||||    
T  2871096 tatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgagatattagtct 2871166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25278923 - 25278849
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatta 75  Q
    ||||||||||||||||||||| || ||||| ||||||| |||||||||||| |||||||||||||||||| ||||    
T  25278923 tatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtcaatta 25278849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33599287 - 33599229
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttg 59  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  33599287 tatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3013531 - 3013600
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||    
T  3013531 tatttcgcaaaattcatggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31238550 - 31238619
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| || ||| ||||||||| ||||||||||||| |||||||||||||||||    
T  31238550 tatttcgcaaaattcagggacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37088156 - 37088225
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||| ||||| ||| ||||||||| |||||||||||| ||||||||||||||||||    
T  37088156 tatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47011525 - 47011456
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  47011525 tatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaaggactattttgaggtattagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 50556152 - 50556223
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||||||||| ||||||||||    
T  50556152 tatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaagacgaatttgagatattagtcta 50556223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 1442613 - 1442551
Alignment:
Q  7 gcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||||||    
T  1442613 gcaaaattcagggacgaaattggccgatttttcaaaattcaaggactattgtgaggtattagt 1442551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3011924 - 3011858
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||| ||||| ||||| ||||||| |||||| |||||||||||||||||||||    
T  3011924 tatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 52643670 - 52643736
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||||||||| || || ||||||| |||||| |||||||||||||||||||||    
T  52643670 tatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25279008 - 25279077
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||| ||| ||||| ||| | ||||||| |||||||||||||||||||||||||||||||    
T  25279008 tatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 25279077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 45045009 - 45044949
Alignment:
Q  10 aaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||| | |||| |||||| |||||||||||||||||||||||||||||||    
T  45045009 aaattcagggacgaattggaccaattttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 1444209 - 1444271
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||||||||| |||||| |||||||||||||||| |||||| | ||||||||||||||||    
T  1444209 aaaattcagggacaaaattggccgatttttcaaaatttaaggactattttgaggtattagtct 1444271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6818733 - 6818802
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| || |||| |||||||||  ||| ||||||||| |||||||||||||||||||||||||||||||    
T  6818733 tattttgctaaatccagggacgagtttggccgattttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51896207 - 51896276
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| || ||||| ||||||| |||||| ||||||| ||||||||||| ||||    
T  51896207 tatttcgcaaaattcagggacaaatttgactgattttttaaaatttaaggacggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51894636 - 51894570
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||||||||||||| ||| || |||||| |||||| |||||||||| |||||||||| ||||||    
T  51894636 tatttcgcaaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23577705 - 23577635
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||| | || |||||||| |||||||||||  ||| ||||| |||||||| ||||||||||    
T  23577705 tatttcgcaaaattgaaggtcgaaattgcccgatttttcaggattgaaggatgaatttgatgtattagtct 23577635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2852955 - 2852885
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2852955 tatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagtct 2852885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 2854383 - 2854451
Alignment:
Q  3 tttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2854383 tttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 2854451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21843012 - 21843083
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21843012 tatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 21843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24541267 - 24541336
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  24541267 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttgaggtattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30463969 - 30463900
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  30463969 tatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17574387 - 17574318
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  17574387 tatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36057668 - 36057737
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  36057668 tatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 36057737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34328847 - 34328919
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    ||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34328847 tattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtctat 34328919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2179856 - 2179786
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  2179856 tatttcacaaaattcagggacgaatttgaccgattttttaaaattcaaggacaaatttgaggtattagtct 2179786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7269466 - 7269535
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||    
T  7269466 tatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtc 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8541291 - 8541360
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||    
T  8541291 tatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtattagtc 8541360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 12738756 - 12738825
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  12738756 tatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 12801579 - 12801648
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  12801579 tatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 28822111 - 28822176
Alignment:
Q  2 atttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  28822111 atttcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgaggtatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29620207 - 29620138
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  29620207 tatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40782231 - 40782300
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  40782231 tatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17577955 - 17578022
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattag 68  Q
    ||||| |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||    
T  17577955 tattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaaggacgaatttgaggtattag 17578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42471617 - 42471546
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  42471617 tatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcta 42471546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29621836 - 29621906
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||    
T  29621836 tatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaatgactattttgaggtattagtct 29621906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40780619 - 40780553
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  40780619 tatttcgaaaaattcagggacgaaattgtccgatttttcaaaattcaaggactattttgaggtatta 40780553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7267912 - 7267843
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||| |||||| |||  |||||||| |||||||||||||||||||||||||||||||    
T  7267912 tatttcgcaaaattcagtgacgaatttggacgattttttaaaattcaaggacgaatttgaggtattagtc 7267843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8539744 - 8539675
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| | ||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  8539744 tatttcgcaaaattcaagaacgaatttgattgatttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42473662 - 42473731
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  42473662 tatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 42473731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34327704 - 34327632
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    ||||||||||||||||| |||||| ||| || |||||  ||||||||||||||||||||||||||||||||||    
T  34327704 tatttcgcaaaattcagcgacgaatttggccaattttagaaaattcaaggacgaatttgaggtattagtctat 34327632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30468335 - 30468404
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||| || |||||| |||||| |||||| |||||||||||||||| ||||||||| ||||    
T  30468335 tatttcgcaaaattgagagacgaatttgaccaattttttaaaattcaaggacgaaattgaggtatcagtc 30468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28813785 - 28813861
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttca--aaattcaaggacgaatttgaggtattagtctatta 75  Q
    |||||||||||||||| ||||||| ||| || ||||||    |||||||||||||||||||||||||||||| ||||    
T  28813785 tatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttgaggtattagtcaatta 28813861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41493913 - 41493840
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatt 74  Q
    |||||| |||||||   ||||||| ||| | ||||||| |||||||||||||||| ||||||||||| ||||||    
T  41493913 tatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtattactctatt 41493840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 28819389 - 28819346
Alignment:
Q  29 accgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    |||||||||| |||||||||||| |||||||| |||||||||||    
T  28819389 accgatttttaaaaattcaaggaggaatttgatgtattagtcta 28819346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43492153 - 43492212
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 60  Q
    |||||||||||||||||||| ||| ||| | ||||||| |||||| ||| ||||||||||    
T  43492153 tatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27691223 - 27691154
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27691223 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29237220 - 29237151
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29237220 tatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35509283 - 35509214
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35509283 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 38548851 - 38548920
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38548851 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33707275 - 33707207
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33707275 tatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 601724 - 601794
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  601724 tatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtct 601794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27692857 - 27692926
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27692857 tattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33762733 - 33762802
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33762733 tatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 33762802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35510839 - 35510908
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35510839 tatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29239207 - 29239279
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29239207 tatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtctat 29239279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8608307 - 8608237
Alignment:
Q  1 tatttcgcaaaatt-cagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8608307 tatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 8608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13282547 - 13282477
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  13282547 tatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 13282477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13106873 - 13106804
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  13106873 tatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33761138 - 33761069
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  33761138 tatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34681086 - 34681155
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  34681086 tatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 34681155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42943446 - 42943515
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  42943446 tatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13284015 - 13284081
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||    
T  13284015 tatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgtggtatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8609862 - 8609931
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||||    
T  8609862 tatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26238795 - 26238726
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||    
T  26238795 tatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33708879 - 33708947
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  33708879 tatttcgcaaaattcagggacgaaattgaccg-ttttttaaaattcaaggatgaatttgaggtattagtc 33708947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 13484613 - 13484544
Alignment:
Q  2 atttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||||||| ||||||||    
T  13484613 atttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggcattagtct 13484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15308281 - 15308350
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  15308281 tatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15488650 - 15488719
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  15488650 tatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 600819 - 600755
Alignment:
Q  11 aattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatta 75  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttgaggtattagtccatta 600755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5036514 - 5036446
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    |||||| ||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||    
T  5036514 tatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41823959 - 41823888
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    |||||||||||||||| ||||||||||  | ||||||| ||||||||||||||||||| |||||||||||||    
T  41823959 tatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaatttaaggtattagtcta 41823888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27404279 - 27404213
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  27404279 tatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatta 27404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42941843 - 42941777
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||| ||||||||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||    
T  42941843 tatttctcaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5038082 - 5038150
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| | ||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  5038082 tatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa-gacgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13108411 - 13108480
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||| | ||  ||||||||| |||||||||||||||||||||| ||||||||    
T  13108411 tatttcgcaaaattcagggacgtatttagccgattttttaaaattcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38547297 - 38547228
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||||| | ||| ||||||||| |||||||||||||||| ||||||||||||||    
T  38547297 tatttcgcaaaattcatggacgtatttggccgattttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22273911 - 22273983
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    ||||| ||||||||||| ||| || ||| ||||||||| ||||||||||||| ||||||||||||||||||||    
T  22273911 tattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtctat 22273983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7745187 - 7745258
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||||||||||||| |||||| ||| | ||||||| ||||||||| |||||||||||| ||||||||||    
T  7745187 tatttcgcaaaattcagagacgaatttggctgatttttgaaaattcaaagacgaatttgagatattagtcta 7745258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13486174 - 13486243
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||| ||| ||||||  |||||||||||| |||||||||| || |||||||||||||||||    
T  13486174 tatttcgcaaaatccagagacgaatctgaccgatttttaaaaattcaagcacaaatttgaggtattagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27406972 - 27407041
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||| ||||||||||| || |||||||||||||||||||| | |||||||||||||||    
T  27406972 tatttcgaataattcatggacgaaattggccaatttttcaaaattcaaggactattttgaggtattagtc 27407041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22272405 - 22272334
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttc--aaaattcaaggacgaatttgaggtattagtc 70  Q
    |||| ||||||||||||||||||| ||||| |||||||   ||||||||| |||||||||||||||||||||    
T  22272405 tattacgcaaaattcagggacgaatttgactgattttttttaaaattcaaagacgaatttgaggtattagtc 22272334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26242389 - 26242455
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||| ||||||||| ||| | ||||||| |||||||||| ||||| |||||||||||    
T  26242389 tatttcgcaaaatttagggacgaatttggctgatttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41825719 - 41825785
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||| ||||||| ||    ||||||| ||||||||||||||||||||||||||||    
T  41825719 tatttcgcaaaattcaaggacgaatttatttgatttttgaaaattcaaggacgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41042659 - 41042728
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||| |||||||||||||| || ||| || |||||| |||||||||||||| |||| |||||||||||    
T  41042659 tatttcacaaaattcagggacaaatttggccaattttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43262157 - 43262226
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||| |||| |||| ||  | ||||||| |||||| ||||||||||||||||||||||||    
T  43262157 tatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9672046 - 9671980
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||| ||||||| ||||  ||||  | ||||||||||||||||||| ||||||||    
T  9672046 tatttcgcaaaattcatggacgaatttgattgattggtgaaaattcaaggacgaatttaaggtatta 9671980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 15305856 - 15305815
Alignment:
Q  11 aattcagggacgaaattgaccgatttttcaaaattcaaggac 52  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  15305856 aattcagggacaaaattgaccaatttttcaaaattcaaggac 15305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 15486225 - 15486184
Alignment:
Q  11 aattcagggacgaaattgaccgatttttcaaaattcaaggac 52  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  15486225 aattcagggacaaaattgaccaatttttcaaaattcaaggac 15486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 41040781 - 41040720
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||  ||||| ||  ||||||||| ||||||||| ||| |||||||||||||||||    
T  41040781 aaaattcagaaacgaatttagccgatttttaaaaattcaaagacaaatttgaggtattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27666120 - 27666189
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27666120 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29996569 - 29996638
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29996569 tatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 56399 - 56330
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  56399 tatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35403639 - 35403708
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  35403639 tatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35402038 - 35401968
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  35402038 tatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgagatattagtct 35401968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39857714 - 39857648
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  39857714 tatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 78034 - 78103
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  78034 tattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtc 78103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 29994966 - 29994907
Alignment:
Q  10 aaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29994966 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagt 29994907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39859284 - 39859355
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||||||||||||||||| || ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  39859284 tatttcgcaaaattcagggactaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcta 39859355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 24226650 - 24226576
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatta 75  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  24226650 tatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtatatta 24226576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37114010 - 37113940
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  37114010 tatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtattagtct 37113940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13169703 - 13169772
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| || ||| ||||||||| |||||||||||||||||||||||||||||||    
T  13169703 tatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20479739 - 20479808
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  20479739 tatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23904652 - 23904583
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  23904652 tattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 23904583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 38474198 - 38474267
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| ||||| |||||||||||||||||    
T  38474198 tatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47384363 - 47384291
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    |||||||||||||||| ||||||| ||| |  |||||||||||||||||||||||||||||||||||||||||    
T  47384363 tatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtattagtctat 47384291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27664499 - 27664433
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  27664499 tattttgcaaaattcagggacaaaattggccgatttttcaaaattcaaggactaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20478111 - 20478042
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  20478111 tatttcgaaaaattcaggtacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35691496 - 35691431
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 66  Q
    |||||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  35691496 tatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47386264 - 47386333
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||    
T  47386264 tatttcgcaaaattcaaggacgaatttgactgattttttaaaattaaaggacgaatttgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 46437176 - 46437105
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||||||||||||  |||||| ||| | ||||||| |||||||||||||||||||||||||||||||||    
T  46437176 tatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcta 46437105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6605417 - 6605483
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||| || || ||||||||||||| ||||||||||||| ||||||||||||||    
T  6605417 tatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37115581 - 37115651
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||| |||||||||||| ||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  37115581 tattttgcaaaattcaggaacgaatttgactgattttttaaaattcaatgacgaatttgaggtattagtct 37115651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48227961 - 48228027
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||||||||||||  |||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  48227961 tatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38549616 - 38549547
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||| ||||||||||||||||| ||| | ||||||| ||||||||||||||||||| |||||||||||    
T  38549616 tatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaaggtattagtc 38549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45361296 - 45361365
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||||| || ||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  45361296 tattttgcaaaattcaggaacaaaattgacccattttttaaaattcaaggaagaatttgaggtattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24228464 - 24228530
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||||||||| ||| || |||||| |||||||||| ||||| |||||||||||    
T  24228464 tatttcgcaaaattcagggacgaatttggccaattttttaaaattcaagaacgaaattgaggtatta 24228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22155867 - 22155936
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||| ||||||| ||| ||||||||| |||||||||||||||| || |||||||||||    
T  22155867 tattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22211782 - 22211851
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||| ||||||| ||| ||||||||| |||||||||||||||| || |||||||||||    
T  22211782 tattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 23906295 - 23906356
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||| ||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtc 23906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45359405 - 45359336
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||||| | ||||||||||||| |||||||| |||| ||||| |||||||||||    
T  45359405 tatttcgcaaaattcaaggacggatttgaccgattttttaaaattcatggacaaatttaaggtattagtc 45359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 34775067 - 34774996
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||| |||||||||| | | ||| ||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  34775067 tattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatattagtcta 34774996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13039662 - 13039722
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgag 61  Q
    |||||||||||||| ||||||||| ||||  ||||||| |||||||||||||||| |||||    
T  13039662 tatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34776970 - 34777036
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||| | ||| ||| || |||||| |||||| ||| |||||||||||||||||    
T  34776970 tatttcgcaaaattcaggaatgaatttggccaattttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37796236 - 37796302
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||||||||||   ||||||| ||| | ||||||| ||||||||||||| ||||||||||||||    
T  37796236 tatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6602404 - 6602335
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||  |  ||  ||||||||| ||||||||||| |||||||||| ||||||||    
T  6602404 tatttcgcaaaattcagggataagtttagccgattttttaaaattcaaggtcgaatttgagttattagtc 6602335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30940480 - 30940549
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||| || |||||| ||| ||||||||| |||||||||| || ||||| |||||||||||    
T  30940480 tatttcgtaaaattaagagacgaatttggccgattttttaaaattcaagaacaaatttaaggtattagtc 30940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13168189 - 13168142
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaa 48  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  13168189 tatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 70
Target Start/End: Original strand, 35693434 - 35693465
Alignment:
Q  39 caaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||||||||||||||    
T  35693434 caaaattcaaggacgaatttgaggtattagtc 35693465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13018102 - 13018036
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||| |||||   ||||||| ||| | ||||||| |||||||||||| |||||||||||||||    
T  13018102 tatttcgctaaatttgaggacgaatttggctgattttttaaaattcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 46439553 - 46439623
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||| |  ||| |  |||| |||||||| ||||||||| |||||||||||| |||||||||    
T  46439553 tatttcgcaaaatttaaagacaagtttgatcgatttttaaaaattcaatgacgaatttgagatattagtct 46439623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14387418 - 14387347
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14387418 tatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 14387347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16763145 - 16763076
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  16763145 tatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16764631 - 16764700
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16764631 tatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19906751 - 19906685
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  19906751 tatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14389159 - 14389228
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||    
T  14389159 tatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16376805 - 16376736
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  16376805 tatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24205667 - 24205598
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  24205667 tatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 24205598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39663223 - 39663154
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  39663223 tattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttaggtattagtc 39663154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40561898 - 40561967
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  40561898 tatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44709820 - 44709894
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatta 75  Q
    ||||||||||||||||||| |||| ||| ||| ||||| ||||||||||||||||||||||||||||||| ||||    
T  44709820 tatttcgcaaaattcagggccgaatttggccggttttttaaaattcaaggacgaatttgaggtattagtcaatta 44709894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2767003 - 2766934
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||||||  ||||||||||||| |||||||||||||||||||||| ||||||||    
T  2767003 tatttcgcaaaattcaaggacgagtttgaccgatttttaaaaattcaaggacgaatttgagctattagtc 2766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19581483 - 19581410
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatt 74  Q
    ||||||||||||||||||||| || ||| | ||||||| |||||| ||||||||||||||||||||||||||||    
T  19581483 tatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggtattagtctatt 19581410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34400383 - 34400314
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||| ||| ||| ||||||||| |||||||||||| ||||||||||||||||||    
T  34400383 tatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtc 34400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37022205 - 37022274
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||||| | |||||||||||||||    
T  37022205 tatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaaggactattttgaggtattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39664823 - 39664892
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| ||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  39664823 tatttcgtaaaattcggggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19908321 - 19908393
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttc-aaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||||||||||||||||| || ||| |||||||||  |||||||||||||||||||||||||||||||||    
T  19908321 tatttcgcaaaattcagggactaatttggccgatttttttaaaattcaaggacgaatttgaggtattagtcta 19908393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 6783423 - 6783364
Alignment:
Q  11 aattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||    
T  6783423 aattcagggacgaaattgaccgattttttaaaattcaaggactattttgaggtattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 2577508 - 2577569
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||  |||||||||||||||||||||| | |||||||||||||||    
T  2577508 aaaattcagggacgaaattggacgatttttcaaaattcaaggactattttgaggtattagtc 2577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24208117 - 24208186
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||    
T  24208117 tatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggagtattttgaggtattagtc 24208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 37020569 - 37020508
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  37020569 aaaattcaaggacaaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40560292 - 40560223
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||| | ||||||| ||||||||| ||||||||||| |||||||||    
T  40560292 tatttcgcaaaattcagggacgaatttggctgattttttaaaattcaaagacgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 17696268 - 17696204
Alignment:
Q  8 caaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    ||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  17696268 caaaattcagggatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattaatcta 17696204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 6786066 - 6786125
Alignment:
Q  11 aattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||| ||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  6786066 aattaagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 6786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6799428 - 6799494
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||| |||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||| |||||    
T  6799428 tatttggcaaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39456800 - 39456869
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||| ||||||| || ||| |||||| |||||||||||| |||||||| |||||||||    
T  39456800 tattttgcaaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaagtattagtc 39456869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 42517603 - 42517558
Alignment:
Q  25 attgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||    
T  42517603 attggccgatttttaaaaattcaaggacgaatttgaggtattagtc 42517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39455238 - 39455169
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| ||||||||||||   ||| || |||||||||| ||||||||||||| |||||||| ||||||||    
T  39455238 tattttgcaaaattcaggactgaatttaaccgattttttaaaattcaaggacaaatttgagatattagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 42519289 - 42519346
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 66  Q
    |||||||| |||| || |||| | |||||| |||||||||||||||||||||||||||    
T  42519289 aaaattcaaggactaatttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6797576 - 6797507
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||| ||||| ||  || |||||| |||||||||  | |||||| |||||||||||    
T  6797576 tatttcgcaaaattcaggaacgaatttagccaattttttaaaattcaaatatgaatttaaggtattagtc 6797507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3363 - 3289
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatta 75  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  3363 tatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcaatta 3289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4535 - 4461
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctatta 75  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  4535 tatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcaatta 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14363 - 14432
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  14363 tatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32518517 - 32518587
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32518517 tatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtct 32518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13613637 - 13613706
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  13613637 tatttcgcaaaattcagggacgaatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32455946 - 32456015
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  32455946 tatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 32456015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  2 atttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

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Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18645124 - 18645193
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  18645124 tatttcgcaaaattcagagacgaa-ttgtccgatttttcaaaattcaaggacgaatttgaggtattagtct 18645193  T

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Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3480677 - 3480746
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  3480677 tatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 3480746  T

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Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9400055 - 9400124
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  9400055 tatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

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Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13610759 - 13610690
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| |||||||||||    
T  13610759 tatttcgcaaaattcagggacaaatttgatcgatttttcaaaattcaaggacgaatttaaggtattagtc 13610690  T

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Target: chr6; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32439146 - 32439215
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||    
T  32439146 tatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaatgactaatttgaggtattagtc 32439215  T

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Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 32516938 - 32516877
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  32516938 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

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Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 6902920 - 6902987
Alignment:
Q  4 ttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  6902920 ttcgcaaaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtct 6902987  T

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Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 11357221 - 11357284
Alignment:
Q  8 caaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  11357221 caaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtct 11357284  T

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Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7371244 - 7371175
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||||||| || ||| ||||||||| |||||||||||||||| ||||||||||||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtc 7371175  T

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Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32454317 - 32454248
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  32454317 tatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 32454248  T

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Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10569939 - 10570011
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    ||||| |||||||||| ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  10569939 tattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtctat 10570011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 11355283 - 11355223
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  11355283 aaaattcagtgacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7373013 - 7373079
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||||  |||||||||||||||||    
T  7373013 tatttcgcaaaattcagggacgaatttgaccaatttttaaaaattcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 8605351 - 8605416
Alignment:
Q  7 gcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 72  Q
    |||||||| ||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||    
T  8605351 gcaaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcta 8605416  T

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Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20525354 - 20525423
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||| |||||||||||||| ||| |||||| |||||| ||||||||| |||||||||||||||||||||    
T  20525354 tattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaagacgaatttgaggtattagtc 20525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20523435 - 20523367
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 69  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||||| |||| |||||||| ||||||||    
T  20523435 tatttcgcaaaattcaaggacgaatttgaccgatttttgaaaattctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3456817 - 3456766
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggac 52  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3456817 tatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6899554 - 6899485
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    |||||| ||||||| || |||||| ||||| ||||||| ||||||||||||| |||||||||||||||||    
T  6899554 tatttcacaaaatttagagacgaatttgactgatttttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10568468 - 10568403
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 66  Q
    |||||||| ||||||| ||||||| ||||| ||||||| ||||||||||||||||||||| |||||    
T  10568468 tatttcgctaaattcaaggacgaatttgactgatttttgaaaattcaaggacgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7051265 - 7051334
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||||||||||||| |||||| ||||| ||||||| |||||||||   ||||||| |||||||||||    
T  7051265 tatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtc 7051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21068694 - 21068628
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||| ||||||   ||||||| ||||| |||| || ||||||||||||||||||||||||||||    
T  21068694 tatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaaggacgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 7049847 - 7049790
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 66  Q
    |||||||||||||||| ||| | ||||||| |||||||||||| ||||||||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttgagatatt 7049790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33276870 - 33276805
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 66  Q
    |||||||||||||| ||  ||||| ||||| ||||||| |||||||||||||||| ||||| ||||    
T  33276870 tatttcgcaaaatttagaaacgaatttgactgattttttaaaattcaaggacgaagttgagttatt 33276805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 21091144 - 21091109
Alignment:
Q  32 gatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21091144 gatttttgaaaattcaaggacgaatttgaggtatta 21091109  T

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Target: scaffold0081 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 54278 - 54347
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  54278 tatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 54347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 1582 - 1645
Alignment:
Q  8 caaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 71  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  1582 caaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtct 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1051 - 982
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 70  Q
    ||||||| | |||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  1051 tatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8331 - 8264
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattag 68  Q
    ||||| |||||||||| | ||||| ||| || |||||| |||||||||||||||||||||||||||||    
T  8331 tattttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 1324 - 1266
Alignment:
Q  9 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 67  Q
    |||||||| ||||||| || ||| |||||| |||||||||||||| |||||||||||||    
T  1324 aaaattcatggacgaatttaaccaattttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 436334 - 436262
Alignment:
Q  1 tatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 73  Q
    |||||||||||||| | ||| ||| ||| | ||||||| |||||||||| ||||||||||||| ||| |||||    
T  436334 tatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggtgttactctat 436262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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