View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5104-Insertion-11 (Length: 262)
Name: NF5104-Insertion-11
Description: NF5104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5104-Insertion-11 |
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Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 5 - 237
Target Start/End: Original strand, 47965324 - 47965556
Alignment:
| Q |
5 |
acaatttcgtcgctgtttcaatggggaacccgttgagtaataatccaatctgccattcaccattttggttaatgaaagttcttcatctaaacttaaatat |
104 |
Q |
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| T |
47965324 |
acaatttcgtcgctgtttcaatggggaacccgttgagtaataatccaatccgccattcaccattttggttaatgaaagttcttcatctaaacttaaatat |
47965423 |
T |
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| Q |
105 |
ttaatgtccaaatcaccaatatgaaactcctcttccagcttcttccacaagcttgaatcactttgtttagtaaccatttatccctatcatatttatcatt |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47965424 |
ttaatgtccaaatcaccaatatgaaactcctcttccagcttcttccacaagcttgaatcactttgtttagtaaccatttatccctatcatatttatcatt |
47965523 |
T |
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| Q |
205 |
catgacattacacatcaaggatctgatgccaag |
237 |
Q |
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|||||||||||||| |||||||||||||||||| |
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| T |
47965524 |
catgacattacacaacaaggatctgatgccaag |
47965556 |
T |
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