View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5104-Insertion-3 (Length: 738)

Name: NF5104-Insertion-3
Description: NF5104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5104-Insertion-3
NF5104-Insertion-3
[»] chr2 (60 HSPs)
chr2 (11-338)||(33639899-33640227)
chr2 (339-704)||(26788672-26789039)
chr2 (340-690)||(28844444-28844797)
chr2 (339-704)||(33135511-33135878)
chr2 (339-593)||(7026491-7026746)
chr2 (346-595)||(28740349-28740598)
chr2 (339-704)||(10657294-10657662)
chr2 (339-593)||(3463559-3463814)
chr2 (340-593)||(13833490-13833743)
chr2 (339-566)||(215320-215547)
chr2 (340-582)||(3574736-3574978)
chr2 (449-704)||(18177265-18177524)
chr2 (345-615)||(16269585-16269855)
chr2 (334-615)||(24776239-24776519)
chr2 (340-615)||(12407269-12407544)
chr2 (340-615)||(31170670-31170945)
chr2 (345-615)||(22551809-22552079)
chr2 (444-701)||(25288152-25288412)
chr2 (345-615)||(44765669-44765939)
chr2 (339-615)||(1789330-1789606)
chr2 (344-582)||(6224626-6224865)
chr2 (345-615)||(35316956-35317226)
chr2 (341-591)||(10125360-10125612)
chr2 (345-615)||(14198623-14198892)
chr2 (393-615)||(20605178-20605400)
chr2 (368-615)||(32125167-32125417)
chr2 (340-615)||(305511-305788)
chr2 (368-615)||(43847563-43847810)
chr2 (399-615)||(5093093-5093309)
chr2 (345-505)||(20605046-20605206)
chr2 (339-483)||(378867-379011)
chr2 (368-591)||(26601270-26601493)
chr2 (444-615)||(9120119-9120290)
chr2 (342-426)||(43078566-43078650)
chr2 (440-593)||(378926-379079)
chr2 (541-704)||(43078653-43078819)
chr2 (639-704)||(7027078-7027143)
chr2 (339-407)||(43825079-43825147)
chr2 (340-466)||(9120057-9120183)
chr2 (446-580)||(21370631-21370765)
chr2 (340-507)||(19144913-19145082)
chr2 (340-425)||(39698598-39698683)
chr2 (639-703)||(6224522-6224586)
chr2 (368-424)||(18176471-18176527)
chr2 (345-424)||(3858188-3858267)
chr2 (639-704)||(379118-379183)
chr2 (368-424)||(2288487-2288541)
chr2 (639-699)||(215197-215257)
chr2 (639-680)||(3463853-3463894)
chr2 (639-704)||(13833386-13833451)
chr2 (341-417)||(2085544-2085620)
chr2 (368-424)||(11534861-11534917)
chr2 (368-424)||(21987317-21987373)
chr2 (368-424)||(24193575-24193631)
chr2 (368-424)||(29940971-29941027)
chr2 (368-424)||(34028935-34028991)
chr2 (369-424)||(45546958-45547013)
chr2 (366-424)||(37981646-37981704)
chr2 (639-676)||(28740275-28740312)
chr2 (367-424)||(42863106-42863163)
[»] chr4 (108 HSPs)
chr4 (339-704)||(5441290-5441658)
chr4 (339-703)||(27767942-27768309)
chr4 (340-704)||(54341031-54341398)
chr4 (339-704)||(37828354-37828720)
chr4 (339-704)||(51320807-51321175)
chr4 (339-615)||(54853512-54853788)
chr4 (342-700)||(32321980-32322341)
chr4 (340-595)||(29649731-29649986)
chr4 (346-582)||(49834890-49835126)
chr4 (342-593)||(30967365-30967616)
chr4 (344-593)||(50018142-50018391)
chr4 (393-615)||(37915767-37915989)
chr4 (343-703)||(41725015-41725372)
chr4 (344-582)||(49501588-49501828)
chr4 (344-582)||(49507653-49507893)
chr4 (340-615)||(25331018-25331293)
chr4 (345-615)||(28541590-28541860)
chr4 (339-615)||(19740952-19741227)
chr4 (358-615)||(32950880-32951137)
chr4 (340-591)||(12913110-12913362)
chr4 (340-615)||(22201902-22202177)
chr4 (339-615)||(41881126-41881404)
chr4 (340-615)||(39479399-39479676)
chr4 (524-704)||(48261198-48261381)
chr4 (339-615)||(1044696-1044969)
chr4 (368-615)||(55302758-55303005)
chr4 (440-593)||(23987201-23987354)
chr4 (368-601)||(25504697-25504930)
chr4 (368-615)||(7007288-7007536)
chr4 (340-615)||(23464840-23465117)
chr4 (337-505)||(37915669-37915837)
chr4 (347-582)||(5799872-5800107)
chr4 (440-615)||(9163063-9163238)
chr4 (339-513)||(20021230-20021404)
chr4 (345-615)||(24131026-24131286)
chr4 (368-615)||(34228627-34228873)
chr4 (345-600)||(1112786-1113040)
chr4 (345-615)||(46635692-46635957)
chr4 (340-615)||(30009721-30009996)
chr4 (345-607)||(37046503-37046766)
chr4 (440-582)||(32684065-32684206)
chr4 (440-615)||(44770897-44771073)
chr4 (391-615)||(3436531-3436755)
chr4 (440-615)||(28370911-28371086)
chr4 (440-591)||(36479299-36479450)
chr4 (345-591)||(31314800-31315042)
chr4 (340-595)||(40537214-40537464)
chr4 (345-615)||(7249809-7250087)
chr4 (440-615)||(12112932-12113107)
chr4 (443-615)||(39307297-39307469)
chr4 (440-615)||(25446038-25446212)
chr4 (340-424)||(28483870-28483954)
chr4 (340-500)||(29855569-29855728)
chr4 (339-497)||(23987142-23987300)
chr4 (480-616)||(42786711-42786847)
chr4 (480-593)||(28483926-28484039)
chr4 (524-615)||(41320881-41320972)
chr4 (441-601)||(53275827-53275987)
chr4 (340-474)||(41320637-41320769)
chr4 (340-426)||(36479422-36479506)
chr4 (346-426)||(28370859-28370939)
chr4 (343-497)||(32684108-32684261)
chr4 (344-432)||(24736335-24736422)
chr4 (367-496)||(39307374-39307503)
chr4 (340-398)||(34141627-34141685)
chr4 (339-425)||(36728046-36728132)
chr4 (529-614)||(27454123-27454208)
chr4 (530-591)||(56445413-56445474)
chr4 (339-463)||(11090277-11090401)
chr4 (340-421)||(42786654-42786736)
chr4 (366-424)||(44646745-44646803)
chr4 (343-432)||(467773-467862)
chr4 (334-424)||(28100584-28100674)
chr4 (565-615)||(8711978-8712028)
chr4 (334-424)||(38230765-38230854)
chr4 (341-394)||(6334460-6334513)
chr4 (341-394)||(6335410-6335463)
chr4 (639-700)||(23987393-23987454)
chr4 (368-466)||(25446008-25446105)
chr4 (368-425)||(41762005-41762062)
chr4 (639-704)||(49501471-49501536)
chr4 (639-704)||(49507536-49507601)
chr4 (639-704)||(49834785-49834850)
chr4 (440-512)||(11090336-11090408)
chr4 (340-424)||(28847104-28847188)
chr4 (440-508)||(37915730-37915798)
chr4 (443-615)||(41581834-41582004)
chr4 (345-424)||(53271912-53271991)
chr4 (565-615)||(24736447-24736497)
chr4 (376-426)||(44771045-44771095)
chr4 (368-424)||(8584007-8584063)
chr4 (641-689)||(30967276-30967324)
chr4 (339-391)||(56445632-56445684)
chr4 (641-704)||(5800159-5800222)
chr4 (393-461)||(9163058-9163126)
chr4 (366-417)||(16018927-16018978)
chr4 (556-615)||(20021436-20021495)
chr4 (369-432)||(49469237-49469300)
chr4 (367-424)||(40143801-40143858)
chr4 (367-419)||(5116986-5117038)
chr4 (340-424)||(44929875-44929959)
chr4 (369-417)||(53594113-53594161)
chr4 (368-424)||(54509740-54509796)
chr4 (369-424)||(16653281-16653336)
chr4 (639-704)||(54853420-54853485)
chr4 (369-414)||(543888-543933)
chr4 (440-485)||(42786713-42786758)
chr4 (367-424)||(47685169-47685226)
[»] chr8 (67 HSPs)
chr8 (339-704)||(14782086-14782454)
chr8 (339-703)||(44725762-44726129)
chr8 (339-615)||(18958770-18959046)
chr8 (347-703)||(39467420-39467778)
chr8 (343-704)||(19717832-19718196)
chr8 (341-704)||(26855957-26856322)
chr8 (343-615)||(10295423-10295696)
chr8 (339-615)||(9288500-9288769)
chr8 (339-593)||(42305850-42306104)
chr8 (339-582)||(4031334-4031577)
chr8 (340-593)||(7466223-7466476)
chr8 (340-693)||(18305933-18306279)
chr8 (340-593)||(16362084-16362337)
chr8 (339-615)||(4402994-4403270)
chr8 (340-582)||(31623583-31623825)
chr8 (339-615)||(26374473-26374747)
chr8 (339-615)||(42735320-42735596)
chr8 (347-615)||(42938160-42938428)
chr8 (393-593)||(32497466-32497666)
chr8 (340-614)||(23115213-23115486)
chr8 (337-607)||(2704870-2705140)
chr8 (340-615)||(5576663-5576939)
chr8 (440-615)||(43166733-43166908)
chr8 (345-615)||(7506942-7507212)
chr8 (345-582)||(32711358-32711595)
chr8 (345-591)||(41478990-41479236)
chr8 (368-595)||(43959573-43959800)
chr8 (344-497)||(43166809-43166962)
chr8 (449-615)||(10392280-10392446)
chr8 (440-615)||(24501856-24502031)
chr8 (345-615)||(42937253-42937514)
chr8 (342-501)||(32497373-32497532)
chr8 (344-485)||(39189944-39190085)
chr8 (344-417)||(43308520-43308593)
chr8 (480-593)||(37857147-37857260)
chr8 (443-592)||(39189881-39190028)
chr8 (530-601)||(8410455-8410526)
chr8 (524-615)||(4950059-4950150)
chr8 (339-466)||(24501963-24502090)
chr8 (524-601)||(13478307-13478384)
chr8 (345-432)||(24214817-24214904)
chr8 (358-421)||(26373711-26373774)
chr8 (341-424)||(37857092-37857175)
chr8 (374-581)||(41069866-41070074)
chr8 (340-415)||(4950218-4950291)
chr8 (639-690)||(7466515-7466566)
chr8 (345-424)||(14061549-14061628)
chr8 (368-417)||(35142068-35142117)
chr8 (368-424)||(1606015-1606071)
chr8 (368-424)||(2112817-2112873)
chr8 (533-581)||(9770497-9770545)
chr8 (340-424)||(17790434-17790518)
chr8 (368-424)||(29260278-29260334)
chr8 (440-508)||(32497429-32497497)
chr8 (639-699)||(43166647-43166706)
chr8 (368-424)||(43605366-43605422)
chr8 (365-424)||(8502654-8502713)
chr8 (369-424)||(10802773-10802828)
chr8 (584-615)||(32497647-32497678)
chr8 (639-678)||(32497705-32497744)
chr8 (368-422)||(30382678-30382732)
chr8 (639-704)||(37857299-37857364)
chr8 (368-421)||(4302813-4302866)
chr8 (639-676)||(4403297-4403334)
chr8 (368-417)||(7148072-7148121)
chr8 (639-676)||(9288436-9288473)
chr8 (370-419)||(23185725-23185774)
[»] chr3 (111 HSPs)
chr3 (339-704)||(36674082-36674450)
chr3 (339-704)||(44906465-44906833)
chr3 (339-615)||(11431412-11431688)
chr3 (339-704)||(52617923-52618285)
chr3 (339-704)||(10660421-10660765)
chr3 (339-615)||(31646328-31646604)
chr3 (350-704)||(54628740-54629098)
chr3 (339-704)||(26107147-26107515)
chr3 (340-615)||(51737770-51738044)
chr3 (340-615)||(40897030-40897306)
chr3 (339-582)||(23753463-23753706)
chr3 (339-615)||(50903284-50903563)
chr3 (343-703)||(48379048-48379410)
chr3 (339-593)||(50762116-50762370)
chr3 (340-700)||(32580063-32580426)
chr3 (340-615)||(20832882-20833154)
chr3 (440-704)||(34483982-34484249)
chr3 (440-704)||(17946275-17946541)
chr3 (347-615)||(19253721-19253989)
chr3 (339-615)||(20498096-20498371)
chr3 (358-615)||(35337640-35337897)
chr3 (393-704)||(18749552-18749865)
chr3 (347-615)||(37820521-37820789)
chr3 (340-615)||(996130-996404)
chr3 (352-615)||(6035097-6035359)
chr3 (340-615)||(10139190-10139465)
chr3 (443-704)||(52810368-52810631)
chr3 (345-513)||(18749462-18749630)
chr3 (340-494)||(27240408-27240562)
chr3 (345-615)||(3206249-3206510)
chr3 (340-615)||(6589450-6589726)
chr3 (347-591)||(6975643-6975884)
chr3 (339-614)||(40246730-40247005)
chr3 (368-615)||(44762081-44762328)
chr3 (440-593)||(10728707-10728860)
chr3 (443-593)||(39038030-39038180)
chr3 (340-601)||(1440010-1440270)
chr3 (342-615)||(29029895-29030167)
chr3 (443-593)||(37454851-37455001)
chr3 (368-615)||(29448902-29449151)
chr3 (340-615)||(33807842-33808121)
chr3 (347-614)||(25418260-25418527)
chr3 (340-615)||(51699524-51699798)
chr3 (339-553)||(12103518-12103729)
chr3 (345-615)||(54625484-54625754)
chr3 (440-615)||(3999689-3999864)
chr3 (393-591)||(44276329-44276523)
chr3 (448-615)||(33996585-33996752)
chr3 (369-615)||(52114446-52114691)
chr3 (340-429)||(39842659-39842748)
chr3 (345-615)||(55235079-55235347)
chr3 (345-615)||(22057655-22057924)
chr3 (339-463)||(10728795-10728919)
chr3 (451-615)||(53929172-53929336)
chr3 (480-587)||(539476-539583)
chr3 (339-497)||(52810306-52810464)
chr3 (339-497)||(17946217-17946374)
chr3 (530-612)||(5825139-5825221)
chr3 (341-432)||(539608-539699)
chr3 (340-432)||(15493958-15494050)
chr3 (345-419)||(38772269-38772343)
chr3 (339-421)||(12734078-12734160)
chr3 (367-498)||(44276266-44276392)
chr3 (524-593)||(39842550-39842619)
chr3 (524-591)||(27899415-27899482)
chr3 (366-468)||(2024120-2024222)
chr3 (458-553)||(15492967-15493061)
chr3 (368-424)||(10105016-10105072)
chr3 (368-424)||(10216163-10216219)
chr3 (368-424)||(10225792-10225848)
chr3 (369-424)||(10225671-10225726)
chr3 (548-606)||(1439947-1440005)
chr3 (529-591)||(52080003-52080065)
chr3 (524-580)||(23535890-23535946)
chr3 (368-424)||(28146261-28146317)
chr3 (368-424)||(45215403-45215459)
chr3 (369-424)||(10104895-10104950)
chr3 (369-424)||(10216042-10216097)
chr3 (345-485)||(27899278-27899418)
chr3 (390-505)||(6131367-6131481)
chr3 (339-401)||(50901199-50901261)
chr3 (440-505)||(2024152-2024217)
chr3 (639-704)||(39038219-39038283)
chr3 (639-703)||(23753360-23753424)
chr3 (639-703)||(39842447-39842511)
chr3 (368-424)||(46749277-46749333)
chr3 (393-497)||(34484150-34484254)
chr3 (443-505)||(6131325-6131387)
chr3 (639-693)||(31646249-31646303)
chr3 (440-505)||(27240439-27240504)
chr3 (368-424)||(19552150-19552206)
chr3 (368-424)||(26555840-26555896)
chr3 (368-424)||(30588865-30588921)
chr3 (368-424)||(36055009-36055065)
chr3 (368-424)||(36785997-36786053)
chr3 (368-424)||(38682452-38682508)
chr3 (368-424)||(50900449-50900505)
chr3 (576-615)||(6131277-6131316)
chr3 (639-678)||(10728629-10728668)
chr3 (639-674)||(11431715-11431750)
chr3 (641-704)||(15492816-15492882)
chr3 (371-421)||(23536007-23536058)
chr3 (369-424)||(38629802-38629857)
chr3 (440-491)||(38772322-38772373)
chr3 (639-678)||(50762038-50762077)
chr3 (645-704)||(51737679-51737737)
chr3 (368-410)||(10067700-10067742)
chr3 (369-419)||(24574926-24574976)
chr3 (368-424)||(44701569-44701626)
chr3 (368-422)||(45926949-45927007)
chr3 (368-424)||(52024201-52024258)
[»] chr7 (95 HSPs)
chr7 (339-704)||(28342228-28342596)
chr7 (340-704)||(29614715-29615082)
chr7 (340-689)||(23101180-23101532)
chr7 (342-704)||(39783983-39784347)
chr7 (341-704)||(9882188-9882553)
chr7 (339-704)||(18838270-18838638)
chr7 (343-615)||(33382522-33382794)
chr7 (340-704)||(7993024-7993391)
chr7 (340-615)||(3022808-3023083)
chr7 (343-615)||(12963587-12963858)
chr7 (349-704)||(28034756-28035114)
chr7 (339-593)||(37327808-37328062)
chr7 (339-615)||(32883662-32883939)
chr7 (341-593)||(39027980-39028232)
chr7 (339-595)||(46405494-46405750)
chr7 (339-582)||(17001099-17001342)
chr7 (362-593)||(40460772-40461003)
chr7 (350-591)||(19251431-19251672)
chr7 (343-703)||(41827199-41827552)
chr7 (352-615)||(12740267-12740529)
chr7 (339-615)||(10068347-10068624)
chr7 (343-593)||(44121965-44122216)
chr7 (340-593)||(33892315-33892569)
chr7 (347-615)||(44256809-44257077)
chr7 (340-615)||(44343439-44343714)
chr7 (339-615)||(30440684-30440960)
chr7 (369-615)||(43581133-43581379)
chr7 (339-586)||(3797129-3797376)
chr7 (440-704)||(509638-509895)
chr7 (451-690)||(8675326-8675567)
chr7 (345-615)||(20275306-20275576)
chr7 (345-615)||(47914160-47914430)
chr7 (345-615)||(973077-973348)
chr7 (368-615)||(18914778-18915025)
chr7 (339-505)||(48117746-48117912)
chr7 (339-615)||(12893296-12893572)
chr7 (340-615)||(40996692-40996968)
chr7 (345-615)||(7719303-7719574)
chr7 (345-615)||(47879062-47879332)
chr7 (345-591)||(31638769-31639015)
chr7 (393-615)||(34695215-34695437)
chr7 (340-601)||(34008904-34009163)
chr7 (339-615)||(43187400-43187662)
chr7 (443-593)||(29585500-29585649)
chr7 (339-429)||(21067763-21067853)
chr7 (340-497)||(509580-509737)
chr7 (345-615)||(32142960-32143233)
chr7 (440-582)||(47066685-47066828)
chr7 (345-591)||(727406-727653)
chr7 (441-615)||(10676463-10676637)
chr7 (339-426)||(29893004-29893091)
chr7 (340-503)||(34695120-34695283)
chr7 (341-425)||(37973007-37973091)
chr7 (471-615)||(7718405-7718549)
chr7 (340-591)||(9179765-9180013)
chr7 (339-463)||(10676573-10676697)
chr7 (529-615)||(43679492-43679578)
chr7 (441-601)||(25805675-25805835)
chr7 (440-615)||(39219420-39219595)
chr7 (358-601)||(7113363-7113602)
chr7 (440-554)||(29893063-29893177)
chr7 (544-615)||(37972910-37972981)
chr7 (344-426)||(47066630-47066713)
chr7 (443-582)||(44623352-44623491)
chr7 (442-601)||(1470291-1470448)
chr7 (340-505)||(8078284-8078450)
chr7 (340-419)||(29585439-29585518)
chr7 (527-588)||(447852-447913)
chr7 (369-466)||(39219526-39219624)
chr7 (341-432)||(43679359-43679451)
chr7 (368-424)||(3634239-3634295)
chr7 (640-704)||(39028272-39028336)
chr7 (533-582)||(19810874-19810923)
chr7 (639-704)||(40460668-40460733)
chr7 (639-700)||(46405396-46405457)
chr7 (368-424)||(34115475-34115531)
chr7 (639-703)||(44121862-44121926)
chr7 (369-424)||(21066809-21066864)
chr7 (345-420)||(48399730-48399805)
chr7 (347-424)||(9599067-9599145)
chr7 (347-424)||(9826638-9826716)
chr7 (643-697)||(29893173-29893227)
chr7 (639-704)||(32883951-32884016)
chr7 (639-704)||(33892198-33892263)
chr7 (440-505)||(34695178-34695243)
chr7 (340-424)||(42678196-42678280)
chr7 (639-690)||(3023110-3023161)
chr7 (641-704)||(37328103-37328166)
chr7 (368-424)||(27418644-27418700)
chr7 (639-699)||(37972823-37972883)
chr7 (368-424)||(40097120-40097176)
chr7 (364-424)||(41060007-41060067)
chr7 (368-424)||(46037352-46037408)
chr7 (564-607)||(10617024-10617067)
chr7 (367-417)||(35090115-35090165)
[»] chr6 (33 HSPs)
chr6 (339-704)||(31895582-31895950)
chr6 (340-615)||(34773296-34773571)
chr6 (339-615)||(14262476-14262752)
chr6 (339-615)||(6197521-6197797)
chr6 (340-615)||(2300781-2301056)
chr6 (352-615)||(7051744-7052007)
chr6 (440-615)||(34759093-34759269)
chr6 (345-614)||(1391516-1391785)
chr6 (332-615)||(29076477-29076761)
chr6 (332-615)||(29111450-29111735)
chr6 (440-593)||(30385122-30385275)
chr6 (446-704)||(7497069-7497329)
chr6 (369-615)||(28002581-28002827)
chr6 (340-461)||(7497005-7497126)
chr6 (527-704)||(31067567-31067738)
chr6 (544-704)||(4200388-4200541)
chr6 (441-592)||(3848200-3848348)
chr6 (339-426)||(30385247-30385336)
chr6 (340-426)||(34759241-34759329)
chr6 (368-424)||(31609694-31609750)
chr6 (659-704)||(34773607-34773652)
chr6 (339-424)||(7100161-7100246)
chr6 (339-424)||(8794384-8794469)
chr6 (368-424)||(5957152-5957208)
chr6 (367-420)||(11007688-11007741)
chr6 (444-553)||(656957-657065)
chr6 (368-424)||(708941-708997)
chr6 (390-474)||(3848101-3848185)
chr6 (639-690)||(30385034-30385085)
chr6 (367-424)||(8636696-8636753)
chr6 (368-424)||(30877878-30877934)
chr6 (369-424)||(10644016-10644071)
chr6 (639-680)||(34759025-34759066)
[»] chr1 (79 HSPs)
chr1 (339-703)||(6312454-6312821)
chr1 (339-704)||(25612037-25612405)
chr1 (340-704)||(29396340-29396707)
chr1 (339-704)||(9322452-9322820)
chr1 (341-704)||(15835005-15835371)
chr1 (371-704)||(51701494-51701828)
chr1 (340-704)||(46327923-46328290)
chr1 (339-615)||(28387437-28387713)
chr1 (348-582)||(18798380-18798614)
chr1 (339-615)||(48177506-48177782)
chr1 (339-593)||(29219168-29219420)
chr1 (339-581)||(49230766-49231008)
chr1 (338-593)||(5495162-5495417)
chr1 (340-615)||(9577476-9577751)
chr1 (345-613)||(35279558-35279826)
chr1 (335-615)||(21222024-21222303)
chr1 (338-544)||(8141243-8141449)
chr1 (340-615)||(28824417-28824691)
chr1 (340-582)||(45272468-45272708)
chr1 (334-615)||(45760053-45760334)
chr1 (335-615)||(730025-730305)
chr1 (339-615)||(50192594-50192871)
chr1 (368-615)||(35679172-35679419)
chr1 (339-615)||(32588997-32589274)
chr1 (345-615)||(49198313-49198581)
chr1 (393-615)||(19451852-19452074)
chr1 (347-615)||(49417972-49418240)
chr1 (440-593)||(38536155-38536308)
chr1 (440-593)||(38558373-38558526)
chr1 (340-615)||(6304296-6304573)
chr1 (345-615)||(47654395-47654668)
chr1 (358-615)||(29556007-29556260)
chr1 (401-615)||(45535886-45536100)
chr1 (347-582)||(48668852-48669084)
chr1 (440-615)||(37014684-37014859)
chr1 (347-615)||(48524208-48524475)
chr1 (340-505)||(953700-953865)
chr1 (334-546)||(22183246-22183457)
chr1 (337-503)||(19452006-19452172)
chr1 (337-591)||(33025390-33025645)
chr1 (393-615)||(47780644-47780867)
chr1 (339-428)||(42290724-42290813)
chr1 (527-615)||(31572241-31572329)
chr1 (340-426)||(38536280-38536366)
chr1 (340-426)||(38558498-38558584)
chr1 (372-487)||(14494122-14494237)
chr1 (337-423)||(42657709-42657795)
chr1 (393-497)||(47784363-47784466)
chr1 (440-582)||(47784368-47784509)
chr1 (345-432)||(47780505-47780592)
chr1 (524-615)||(51085860-51085951)
chr1 (532-591)||(955823-955882)
chr1 (368-424)||(19007581-19007637)
chr1 (368-424)||(51826838-51826894)
chr1 (369-426)||(25831139-25831196)
chr1 (639-704)||(38536051-38536116)
chr1 (639-704)||(38558269-38558334)
chr1 (368-424)||(27198297-27198353)
chr1 (368-424)||(48194616-48194672)
chr1 (368-424)||(48203374-48203430)
chr1 (527-582)||(31622536-31622591)
chr1 (358-432)||(31572390-31572464)
chr1 (440-505)||(19452046-19452111)
chr1 (368-424)||(14555313-14555369)
chr1 (639-690)||(28387359-28387410)
chr1 (345-404)||(42055116-42055175)
chr1 (441-503)||(14494149-14494211)
chr1 (546-592)||(43885157-43885203)
chr1 (342-419)||(19684674-19684751)
chr1 (368-424)||(1928406-1928462)
chr1 (368-424)||(10896826-10896882)
chr1 (345-417)||(19893454-19893526)
chr1 (368-424)||(36402273-36402329)
chr1 (584-615)||(5495150-5495181)
chr1 (345-424)||(43553539-43553618)
chr1 (639-690)||(45272758-45272809)
chr1 (367-424)||(33243312-33243369)
chr1 (367-424)||(33263485-33263542)
chr1 (367-424)||(52705418-52705475)
[»] chr5 (48 HSPs)
chr5 (339-704)||(14000056-14000424)
chr5 (339-690)||(1152068-1152422)
chr5 (339-615)||(4550300-4550576)
chr5 (342-704)||(13925821-13926186)
chr5 (344-593)||(4240517-4240766)
chr5 (341-582)||(37013803-37014044)
chr5 (339-593)||(40013767-40014018)
chr5 (340-598)||(22746185-22746443)
chr5 (339-593)||(5948996-5949249)
chr5 (339-615)||(21146954-21147230)
chr5 (452-615)||(7947616-7947779)
chr5 (345-615)||(33656084-33656356)
chr5 (407-593)||(1461203-1461389)
chr5 (345-616)||(6460685-6460956)
chr5 (370-615)||(139191-139436)
chr5 (345-615)||(27458993-27459262)
chr5 (369-615)||(32157940-32158188)
chr5 (393-615)||(5272962-5273184)
chr5 (480-704)||(39852373-39852600)
chr5 (440-615)||(7016782-7016957)
chr5 (390-606)||(14465279-14465494)
chr5 (345-601)||(9689554-9689806)
chr5 (345-429)||(7948546-7948630)
chr5 (480-615)||(849175-849310)
chr5 (340-466)||(7016889-7017015)
chr5 (388-591)||(9220774-9220977)
chr5 (345-503)||(5273116-5273275)
chr5 (339-421)||(43319133-43319216)
chr5 (340-424)||(28594444-28594529)
chr5 (345-466)||(16894052-16894172)
chr5 (368-424)||(26795635-26795691)
chr5 (369-424)||(26806578-26806633)
chr5 (368-421)||(1511589-1511642)
chr5 (639-704)||(4240413-4240478)
chr5 (368-424)||(26806699-26806755)
chr5 (369-424)||(26795514-26795569)
chr5 (345-412)||(27786213-27786280)
chr5 (366-424)||(9689338-9689396)
chr5 (639-704)||(1461099-1461164)
chr5 (639-704)||(37014084-37014148)
chr5 (368-424)||(17518454-17518510)
chr5 (397-497)||(1461257-1461357)
chr5 (639-701)||(5949288-5949350)
chr5 (640-704)||(7947524-7947588)
chr5 (368-424)||(40410616-40410672)
chr5 (390-421)||(849169-849200)
chr5 (441-508)||(5273153-5273220)
chr5 (639-704)||(40013663-40013728)
[»] scaffold0543 (1 HSPs)
scaffold0543 (344-704)||(10452-10815)
[»] scaffold0922 (1 HSPs)
scaffold0922 (339-589)||(4087-4337)
[»] scaffold1504 (2 HSPs)
scaffold1504 (339-615)||(750-1026)
scaffold1504 (639-700)||(1053-1111)
[»] scaffold0110 (1 HSPs)
scaffold0110 (358-699)||(39574-39918)
[»] scaffold0400 (1 HSPs)
scaffold0400 (372-615)||(15077-15320)
[»] scaffold0365 (1 HSPs)
scaffold0365 (372-615)||(15720-15963)
[»] scaffold0037 (1 HSPs)
scaffold0037 (340-615)||(100099-100374)
[»] scaffold0306 (2 HSPs)
scaffold0306 (440-704)||(13870-14127)
scaffold0306 (339-497)||(13811-13969)
[»] scaffold0152 (4 HSPs)
scaffold0152 (440-593)||(21304-21457)
scaffold0152 (339-497)||(21358-21516)
scaffold0152 (639-704)||(21200-21265)
scaffold0152 (639-704)||(28532-28597)
[»] scaffold0042 (2 HSPs)
scaffold0042 (440-690)||(58042-58295)
scaffold0042 (340-429)||(58264-58353)
[»] scaffold0276 (1 HSPs)
scaffold0276 (392-614)||(584-806)
[»] scaffold0347 (3 HSPs)
scaffold0347 (340-429)||(14783-14872)
scaffold0347 (584-615)||(14892-14923)
scaffold0347 (639-680)||(14950-14991)
[»] scaffold0113 (2 HSPs)
scaffold0113 (440-614)||(38940-39114)
scaffold0113 (340-497)||(39015-39172)
[»] scaffold0054 (3 HSPs)
scaffold0054 (480-615)||(36951-37086)
scaffold0054 (349-426)||(37056-37133)
scaffold0054 (440-497)||(37027-37084)
[»] scaffold0004 (2 HSPs)
scaffold0004 (443-615)||(102084-102258)
scaffold0004 (345-466)||(102029-102151)
[»] scaffold0151 (2 HSPs)
scaffold0151 (480-615)||(38649-38783)
scaffold0151 (345-421)||(38758-38834)
[»] scaffold0010 (5 HSPs)
scaffold0010 (400-510)||(233685-233795)
scaffold0010 (400-510)||(234533-234643)
scaffold0010 (400-510)||(222517-222627)
scaffold0010 (392-426)||(233719-233753)
scaffold0010 (392-426)||(234567-234601)
[»] scaffold0651 (1 HSPs)
scaffold0651 (345-483)||(8655-8793)
[»] scaffold0839 (2 HSPs)
scaffold0839 (553-615)||(3736-3798)
scaffold0839 (643-704)||(3644-3705)
[»] scaffold0492 (2 HSPs)
scaffold0492 (341-402)||(12030-12091)
scaffold0492 (344-402)||(11998-12056)
[»] scaffold0287 (1 HSPs)
scaffold0287 (368-424)||(11790-11846)
[»] scaffold0007 (1 HSPs)
scaffold0007 (532-607)||(199905-199980)
[»] scaffold0016 (1 HSPs)
scaffold0016 (339-424)||(81784-81869)
[»] scaffold0472 (1 HSPs)
scaffold0472 (340-424)||(1887-1971)
[»] scaffold0202 (1 HSPs)
scaffold0202 (368-425)||(16545-16602)


Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 11 - 338
Target Start/End: Original strand, 33639899 - 33640227
Alignment:
Q  11 tttccacaatgagatcaggaagaagaacgggaagagacattgtgagatcacctaacgagaagcttcagcaaaacattcctctacatattttgttggggaa 110  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33639899 tttccacactgagatcaggaagaagaacgggaagagacattgtgagatcacctaacgagaagcttcagcaaaacattcctctacatattttgttggggaa 33639998  T
Q  111 atgtnnnnnnnnn-ttccttcatggagagaaatgaaagaggaagtggaaactgacagaaccgagagaggtgagattacggaattagggttttgttagtga 209  Q
    ||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33639999 atgtaaaaaaaaaattccttcatggagagaaatgaaagaggaagtggaaactgacagaaccgagagaggtgagattacggaattagggttttgtttgtga 33640098  T
Q  210 gaaagtgtaacgaccaaggtttttaaaattgaaatcgtctgataaaatactctacatgacagaaataacatgaaattccattataggacttaaaaaggaa 309  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33640099 gaaagtgtaacgaccaaggtttttaaaattgaaatcctctgataaaatactctacatgacagaaataacatgaaattccattataggacttaaaaaggaa 33640198  T
Q  310 aagaatttaaaatagactaagatcctaag 338  Q
    |||||||||||||| ||||||||||||||    
T  33640199 aagaatttaaaatacactaagatcctaag 33640227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 26788672 - 26789039
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  26788672 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 26788771  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatt--tnnnnnnngtcttgtggtatt 536  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||          |||||||||||||    
T  26788772 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtatt 26788871  T
Q  537 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgagatttcttttatnnnnn 636  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||     | | |         
T  26788872 caaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataa 26788971  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26788972 gatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 26789039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 340 - 690
Target Start/End: Original strand, 28844444 - 28844797
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||           
T  28844444 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 28844543  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||||||    
T  28844544 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 28844643  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | ||   |  ||||| ||         
T  28844644 aatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaa 28844743  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctc 690  Q
      |||||||||||| |||||||||| |||||||||||| ||||| |||||||||    
T  28844744 gatgagatttcttgagattgtttttcttttaaaagttagtatctatttcttctc 28844797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 33135511 - 33135878
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||          
T  33135511 gggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaa 33135610  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     || |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||| ||||||||||    
T  33135611 agtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattca 33135710  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  33135711 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaa 33135809  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||| |||||||||||| ||||| ||||||||| | |||||||||||    
T  33135810 aaatgagatttcttgagattgtttttcttttaaaagttattatctctttcttctcctttctctctctct 33135878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 339 - 593
Target Start/End: Original strand, 7026491 - 7026746
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaa-gtcttgtggtattcaatcaagactttttgcaatttnnnnn 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         
T  7026491 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaa 7026590  T
Q  438 nngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
      ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       ||||||||||||||    
T  7026591 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 7026690  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7026691 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 346 - 595
Target Start/End: Complemental strand, 28740598 - 28740349
Alignment:
Q  346 gtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttg 445  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||       ||||||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 28740499  T
Q  446 tggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 545  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||||||||||||    
T  28740498 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 28740399  T
Q  546 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28740398 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg 28740349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 10657294 - 10657662
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||||| || ||          
T  10657294 gggggatgtattggatttggattctatgggattttaaatgactttttagttatgaaaaagtcgtgtggtattcaatcaaggctttttgaaacttaaaaaa 10657393  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||  ||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||       |||||||||||||||    
T  10657394 agtcttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 10657493  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  | ||| ||        
T  10657494 aaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaa 10657593  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       ||| |||||||| |||||||||| ||||||||| |||||||| ||||||||| |||||||||||||    
T  10657594 agatgaaatttcttgagattgtttttcttttaaaaggtactatctctttcttctcctctctctctctct 10657662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 339 - 593
Target Start/End: Original strand, 3463559 - 3463814
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||          
T  3463559 gggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaa 3463658  T
Q  439 ngtcttgtggtattcaatcaaga-ctctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
     ||||| |  ||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||||||       |||||||||||||     
T  3463659 agtcttataatattcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtattt 3463758  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  3463759 aaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttgt 3463814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 340 - 593
Target Start/End: Complemental strand, 13833743 - 13833490
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| ||           
T  13833743 ggggatgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaa 13833644  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||| ||       ||||| ||||||||||    
T  13833643 gtcttgtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaa 13833544  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||||| ||||||||||||||||||||||||||||  |||||||||    
T  13833543 aatcattcaaattttgaaggattgtttaataaattggattttgtgggattttgt 13833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 339 - 566
Target Start/End: Complemental strand, 215547 - 215320
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  215547 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 215448  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||||| ||       |||| ||||||||||    
T  215447 agtcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattca 215348  T
Q  539 aaatcattcaaatttcgaaggattgttt 566  Q
    |||||||||||| ||| |||||||||||    
T  215347 aaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 340 - 582
Target Start/End: Original strand, 3574736 - 3574978
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||           
T  3574736 ggggatgtgttggattagaattctatggaattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaa 3574835  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    || |||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||||||| |||||||    
T  3574836 gttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaa 3574935  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3574936 aatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 449 - 704
Target Start/End: Original strand, 18177265 - 18177524
Alignment:
Q  449 tattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 548  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       || ||||||||||||||||||||||    
T  18177265 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattca 18177364  T
Q  549 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntgagatt 645  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||       |||||||    
T  18177365 aatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatt 18177464  T
Q  646 tcttgtgattgtttttattttaaaagttactatctttttct-tctcatctctctctctct 704  Q
    ||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  18177465 tcttgagattgtttttattttaaaagttactatctttctctctctcatctctctctctct 18177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 16269585 - 16269855
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  16269585 tgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 16269684  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||||||    
T  16269685 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 16269784  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  16269785 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaatttta 16269855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 334 - 615
Target Start/End: Original strand, 24776239 - 24776519
Alignment:
Q  334 ctaaggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttn 433  Q
    |||||||||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| |||  |||||     
T  24776239 ctaagggggg-tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaattta 24776337  T
Q  434 nnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggt 533  Q
          |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||    
T  24776338 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 24776437  T
Q  534 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  24776438 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 24776519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 12407269 - 12407544
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| | ||| ||||||           
T  12407269 gggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttttcaattttaaaaaa 12407368  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||| ||||| || |||| ||       |||| |||||||||||    
T  12407369 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaa 12407468  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  12407469 aatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 12407544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 31170945 - 31170670
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||           
T  31170945 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 31170846  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||||||||    
T  31170845 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 31170746  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  31170745 aatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 31170670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 22552079 - 22551809
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||| ||||| ||||||       |||||    
T  22552079 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaaaaaagtctt 22551980  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| |||||||| | |||||||||||||||||| |||| ||       |||| |||||||||||||| |    
T  22551979 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatta 22551880  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||| ||||| |||||||    
T  22551879 ttcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaatttta 22551809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 444 - 701
Target Start/End: Original strand, 25288152 - 25288412
Alignment:
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| ||        |||||||||||||||||||    
T  25288152 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatc 25288251  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntg 640  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||   |  ||||| ||       ||    
T  25288252 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatg 25288351  T
Q  641 agatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctc 701  Q
    |||||||||| |||||||||| |||||||||||||||| | ||||||||| | ||||||||    
T  25288352 agatttcttgagattgtttttcttttaaaagttactatatatttcttctcctttctctctc 25288412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 44765669 - 44765939
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||| ||| ||| ||||||       |||||    
T  44765669 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtctt 44765768  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||| ||||| || |||| ||       |||| ||||||||||||||||    
T  44765769 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 44765868  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  44765869 ttcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 44765939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 1789330 - 1789606
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | ||||||| |||||||||||||| ||||| || || ||||||||||||||||||||||||| ||| ||| ||||||          
T  1789330 ggggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaa 1789429  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| ||||||||||||| |||||||||||| ||| |||||||  ||||||||||||| ||| || |||| ||       |||| ||||||||||    
T  1789430 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattca 1789529  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| || || |||||||    
T  1789530 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaatttta 1789606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 344 - 582
Target Start/End: Complemental strand, 6224865 - 6224626
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    ||||||| |||||||||||||| | |||||||||  |||||||||||||||||||| |||||||||| |||||||| ||||||||| ||       |||     
T  6224865 atgtattagattaggattctataaaattttaaaaagctttttaattatgaaaaagttttgtggtattgaatcaagattttttgcaaattaaaaaaagtca 6224766  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| |||       |||||||||||||||||||    
T  6224765 tgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaat 6224666  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttg 582  Q
     ||||||||||||||||||| |||||||||||||||||||    
T  6224665 tattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 35316956 - 35317226
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    ||||||| || | ||||||| | |||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  35316956 tgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtttt 35317055  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| ||||||||  |||||||||||||||| || |||| ||       |||| ||||||||||||||||    
T  35317056 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 35317155  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||| |||||||    
T  35317156 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaatttta 35317226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 341 - 591
Target Start/End: Complemental strand, 10125612 - 10125360
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 440  Q
    |||||||||| |||||| |||||| |||||||||||||| ||||||||||||||||||||| |||  |||||||||||||| ||||||||||       |    
T  10125612 gggatgtattcgattagaattctaagagattttaaaagattttttaattatgaaaaagtctcgtgacattcaatcaagactctttgcaatttaaaaaaag 10125513  T
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtc--ttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
    | |||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||| ||       ||||  || ||||||    
T  10125512 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattca 10125413  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||||||||||||||| |||||||||||||||||||| ||||||  |||||||    
T  10125412 aaatcattcaaatttcaaaggattgtttaataaattgaattttgtgggatttt 10125360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 14198892 - 14198623
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| |||  |||||       |||||    
T  14198892 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaa-gtctt 14198794  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||| | |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||  ||||||||||||||||    
T  14198793 gtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatca 14198694  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  14198693 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 14198623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 393 - 615
Target Start/End: Original strand, 20605178 - 20605400
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    ||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||    
T  20605178 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggta 20605277  T
Q  493 ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    ||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  20605278 ttcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttg 20605377  T
Q  593 tgggattttgtagtgtaatttta 615  Q
    ||||||||| ||||| |||||||    
T  20605378 tgggattttctagtgaaatttta 20605400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 368 - 615
Target Start/End: Original strand, 32125167 - 32125417
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactcttt 467  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||| | |||||    
T  32125167 gattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattcttt 32125266  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttt---tcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 564  Q
    ||||||| ||| ||||| || | ||||||||||||||| |   | |||||||       |||  ||||||||||||||||||||||||||||||||||||    
T  32125267 gtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaaggattgt 32125366  T
Q  565 ttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||  |||||||||||||||||||||||||| ||||  |||||||    
T  32125367 ttaataaatcagattttgatggattttgtgggattttctagtaaaatttta 32125417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 305788 - 305511
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||| |||||||||| | ||||||| | ||||||||||||||||||  || |||||||||||||||||||||||||||||||| ||| ||||||          
T  305788 gggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 305689  T
Q  439 n-gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
      |||||||| ||||||||||||| | |||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||||||    
T  305688 aagtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 305589  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||| ||| |||||||||||||||  ||||| ||||||||||||| |||||| ||||| |||||||    
T  305588 aaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaatttta 305511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 368 - 615
Target Start/End: Original strand, 43847563 - 43847810
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactcttt 467  Q
    |||||||||||||||||| ||  |||||||||||| | |||||||| ||| ||| ||| ||||||       |||||||| ||||||||||||| |||||    
T  43847563 gattttaaaagacttttttatcgtgaaaaagtcttctagtattcaagcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttt 43847662  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttta 567  Q
    ||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| || ||||||||||||||||||||||||||||||||||||    
T  43847663 gtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaaggattgttta 43847762  T
Q  568 ataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||  || ||||||||||||||||| ||||| ||||| |||||||    
T  43847763 ataaatcagaatttgatggattttgtggaattttctagtgaaatttta 43847810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 399 - 615
Target Start/End: Complemental strand, 5093309 - 5093093
Alignment:
Q  399 tcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaat 498  Q
    ||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||    
T  5093309 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaat 5093210  T
Q  499 caagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 598  Q
    ||||||  || |||| ||       |||| || |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  5093209 caagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggat 5093110  T
Q  599 tttgtagtgtaatttta 615  Q
    ||| || || |||||||    
T  5093109 tttctaatgaaatttta 5093093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 345 - 505
Target Start/End: Original strand, 20605046 - 20605206
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  20605046 tgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 20605145  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagact 505  Q
    ||| ||||||||||||| |||||||||||| ||| |||||||| | |||||||||||||||    
T  20605146 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagact 20605206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 339 - 483
Target Start/End: Original strand, 378867 - 379011
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||| | |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  378867 gggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 378966  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagt 483  Q
     |||||||||||||||||||| ||| ||| |||||| ||| ||||    
T  378967 agtcttgtggtattcaatcaaaactttttctcatttaaaaaaagt 379011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 368 - 591
Target Start/End: Complemental strand, 26601493 - 26601270
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactcttt 467  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||  |||||       || ||||| |||| ||||||||||||||    
T  26601493 gattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaaaaaagttttgtgttatttaatcaagactcttt 26601394  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttta 567  Q
    ||||||  ||| ||||||||   ||||||||||||||| || |||| ||       |||  ||||||||||||||||||||||||||||| | |||||||    
T  26601393 gtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgttta 26601294  T
Q  568 ataaattggattttgatggatttt 591  Q
    ||||||  |||||||  |||||||    
T  26601293 ataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 444 - 615
Target Start/End: Original strand, 9120119 - 9120290
Alignment:
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    ||||||||||||||||||||||||   |||||||| |||||||| | ||||||||||||| | || |||| ||        ||| ||| |||||||||||    
T  9120119 tgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatc 9120218  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||| ||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  9120219 attcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaatttta 9120290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 342 - 426
Target Start/End: Original strand, 43078566 - 43078650
Alignment:
Q  342 ggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  43078566 ggatgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaagattttttg 43078650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 440 - 593
Target Start/End: Original strand, 378926 - 379079
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||||||| ||||  | || ||| |||||||| | ||||||||||| ||||||  ||||||       || |  ||||||||||    
T  378926 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaa 379025  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  379026 aatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 541 - 704
Target Start/End: Original strand, 43078653 - 43078819
Alignment:
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt---attgagatttcttttatnnnnnn 637  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||   ||  | |  ||||| ||          
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  638 ntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
     | |||||||||| |||||||||| |||||||||||| ||||| ||||||||| | |||||||||||    
T  43078753 ataagatttcttgagattgtttttgttttaaaagttagtatctctttcttctcctttctctctctct 43078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 7027078 - 7027143
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7027078 tgagatttcttgagattgtttttattttaaaagttactatctttttcttctcctctctctctctct 7027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 339 - 407
Target Start/End: Original strand, 43825079 - 43825147
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggt 407  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43825079 ggggaatgtattggattatgattctatgagattttaaaagattttttaattatgaaaaagtcttgtggt 43825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 340 - 466
Target Start/End: Original strand, 9120057 - 9120183
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||| || |||||||||||||||||||| ||| ||||||           
T  9120057 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaagactctttccaattttaaaaaa 9120156  T
Q  440 gtcttgtggtattcaatcaagactctt 466  Q
    |||||||| ||||||||||||| ||||    
T  9120157 gtcttgtgttattcaatcaagattctt 9120183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 446 - 580
Target Start/End: Complemental strand, 21370765 - 21370631
Alignment:
Q  446 tggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 545  Q
    ||||||||| || ||||||||| | |||| ||| |||| | | ||||||||||||| |  |||||||| |        ||||||||||||||||||||||    
T  21370765 tggtattcattccagactctttcttatttaaaaaaagtttagtgatattcaatcaaaaaatttcatcactcaaaaaaagtcttgtggtattcaaaatcat 21370666  T
Q  546 tcaaatttcgaaggattgtttaataaattggattt 580  Q
    |||||||| |||| ||||||| |||||||||||||    
T  21370665 tcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 19144913 - 19145082
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| ||||||||| || ||||||| | |||||||||| | ||||| || || ||||||||||||||||||||||||| |||  || ||| ||           
T  19144913 gggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaaactcatttcaa-ttaaaaaaa 19145011  T
Q  440 gtcttgtggtattcaatcaag---actctttgtcattttaaataagtcttgagatattcaatcaagacttt 507  Q
     ||||||||||||||||||||   ||||||| |||||| ||| ||| |||| | |||||||||||||||||    
T  19145012 atcttgtggtattcaatcaagagtactctttatcatttaaaaaaagacttgtggtattcaatcaagacttt 19145082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 425
Target Start/End: Complemental strand, 39698683 - 39698598
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagacttttt 425  Q
    |||| |||||| ||||||||||  | |||||||||||| ||||||||| ||| ||| | |||||||||||||||||||||| ||||    
T  39698683 gggggtgtattcgattaggatttcaagagattttaaaaaactttttaactataaaacaatcttgtggtattcaatcaagacatttt 39698598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 639 - 703
Target Start/End: Complemental strand, 6224586 - 6224522
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
    ||||||||||||  ||||||||| |||||||||||||||||| ||||||||| | ||||||||||    
T  6224586 tgagatttcttgatattgtttttcttttaaaagttactatctctttcttctcctttctctctctc 6224522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 18176527 - 18176471
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||    
T  18176527 gattttaaaagattttttaataataaaaaaatcttgtggtattcaatcaagactttt 18176471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 345 - 424
Target Start/End: Complemental strand, 3858267 - 3858188
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||| |||| |||| || | ||||||||||||||||||||| || ||||| | || |||||||||||||||||||||    
T  3858267 tgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaacttttttggtattcaatcaagactttt 3858188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 379118 - 379183
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||| ||| |||||||||| |||||||| ||||||||| ||||||||| | |||||||||||    
T  379118 tgagatttattgagattgtttttcttttaaaacttactatctctttcttctcgtttctctctctct 379183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 2288487 - 2288541
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||    
T  2288487 gattttaaaagacttttttattat--aaaagtctagtggtattcaatcaagactttt 2288541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 699
Target Start/End: Complemental strand, 215257 - 215197
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctc 699  Q
    ||||||||| || |||||||||| |||||||||||||||||| ||||||||| | ||||||    
T  215257 tgagatttcatgagattgtttttcttttaaaagttactatctctttcttctcctttctctc 215197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 680
Target Start/End: Original strand, 3463853 - 3463894
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatct 680  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  3463853 tgagatttcttgagattgtttttgttttaaaagttactatct 3463894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 13833451 - 13833386
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| ||||| |||| |||||||| ||||||||| ||||||||  | |||||||||||    
T  13833451 tgagatttcttgagattgcttttcttttaaaaattactatctctttcttcttctttctctctctct 13833386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 417
Target Start/End: Original strand, 2085544 - 2085620
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 417  Q
    ||||||||||| |||  ||||  ||||||||||||||||||||||||  || |||||||| |  |||||||||||||    
T  2085544 gggatgtattgaattgagatttcatgagattttaaaagactttttaaaaataaaaaagtcatcaggtattcaatcaa 2085620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 11534861 - 11534917
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  11534861 gattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 21987317 - 21987373
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| || ||||||||||  ||| |||||||||||| ||||||    
T  21987317 gattttaaaagacttttttatgatgaaaaagttatgtagtattcaatcaaaactttt 21987373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 24193575 - 24193631
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||| ||||||||||||||| ||||    
T  24193575 gattttaaaagacttttttgttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 29940971 - 29941027
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  29940971 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 29941027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 34028991 - 34028935
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  34028991 gattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 45546958 - 45547013
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  45546958 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 45547013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 37981646 - 37981704
Alignment:
Q  366 gagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||| |||| ||||| |||||  ||||||| |||||||||||||||| ||||||    
T  37981646 gagattttagaagattttttgattatagaaaagtcatgtggtattcaatcaaaactttt 37981704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 676
Target Start/End: Complemental strand, 28740312 - 28740275
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttact 676  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  28740312 tgagatttcttgagattgtttttcttttaaaagttact 28740275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 42863106 - 42863163
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||||||  || ||||||||| |||||||| ||| |||| ||||    
T  42863106 agattttaaaagactttttaaaaataaaaaagtctcgtggtattaaattaagattttt 42863163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 108)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 5441290 - 5441658
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  5441290 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 5441389  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  5441390 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 5441489  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  5441490 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 5441589  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441590 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 5441658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 339 - 703
Target Start/End: Original strand, 27767942 - 27768309
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||          
T  27767942 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaa 27768041  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  27768042 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 27768141  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  27768142 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 27768241  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
       |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768242 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctc 27768309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 340 - 704
Target Start/End: Original strand, 54341031 - 54341398
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  54341031 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 54341130  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       ||||||||||||||||    
T  54341131 gtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 54341230  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||         
T  54341231 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 54341330  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      |||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  54341331 gatgagatttcttgagattgtttttattttaaaagttactatttttttcttctaatctctctctctct 54341398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 339 - 704
Target Start/End: Complemental strand, 37828720 - 37828354
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  37828720 gggggatgtattggattagaattct--gagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaa 37828623  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
      ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||       |||||||||||||||    
T  37828622 aatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattca 37828523  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  37828522 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaa 37828423  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37828422 agatgagatttcttgagattgtttttattttaaaaattactatctttttcttctcatctctctctctct 37828354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 51320807 - 51321175
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||          
T  51320807 gggggatgtattggattaggattctacggaattttaaaagactttttaattatgaaaaaattttgtggtattcaatcaagactttttgcaacttaaaaaa 51320906  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     || |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||||||||||||||    
T  51320907 agttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 51321006  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||   ||   |  | ||| ||        
T  51321007 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaa 51321106  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||| |||||||||||||||||| |||||||   |||||||||||||    
T  51321107 agatgagatttcttgagattgtttttcttttaaaagttactatctctttcttcctctctctctctctct 51321175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 54853788 - 54853512
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||          
T  54853788 gggggatgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 54853689  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||||||||||||||||||||||| |||||||||| |||||||||  ||||||||||||||||||||||| ||       |||||||||||||||    
T  54853688 agtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 54853589  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54853588 aaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 54853512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 342 - 700
Target Start/End: Original strand, 32321980 - 32322341
Alignment:
Q  342 ggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 441  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || ||       ||    
T  32321980 ggatgtattggattaggattctatcagaatttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaaaaagt 32322079  T
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 541  Q
    | |||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||       ||||||||||||||||||    
T  32322080 catgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaa 32322179  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnn 638  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||   || ||||| ||           
T  32322180 tcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaaga 32322279  T
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctct 700  Q
    |||||||||||| |||||||||| |||||| |||||  |||| ||||||||| | |||||||    
T  32322280 tgagatttcttgagattgtttttcttttaatagttatcatctctttcttctcctttctctct 32322341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 340 - 595
Target Start/End: Complemental strand, 29649986 - 29649731
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||           
T  29649986 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaatttaaaaaaa 29649887  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||  || || |||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||||||    
T  29649886 gtcttgtggtattagattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 29649787  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg 595  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29649786 aatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 346 - 582
Target Start/End: Complemental strand, 49835126 - 49834890
Alignment:
Q  346 gtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttg 445  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||       ||||||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 49835027  T
Q  446 tggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 545  Q
    ||||||||||||||||||||||||||||||||  ||| |||||| ||||||||||||||||||||||| ||       ||||||||||||||||||||||    
T  49835026 tggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 49834927  T
Q  546 tcaaatttcgaaggattgtttaataaattggattttg 582  Q
    |||||||||||||||||||||||||||||||||||||    
T  49834926 tcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 342 - 593
Target Start/End: Complemental strand, 30967616 - 30967365
Alignment:
Q  342 ggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 441  Q
    ||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  30967616 ggatgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagt 30967517  T
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 541  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||| ||       ||||||||||||||||||    
T  30967516 cttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaa 30967417  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||    
T  30967416 tcattcaaatttcaaaggattgtttaataaattggattttgtgggattttgt 30967365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 344 - 593
Target Start/End: Original strand, 50018142 - 50018391
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    |||||||||||||| |||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||       ||||    
T  50018142 atgtattggattagaattctatgggattttaaaatattttttaattataaaaaagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtct 50018241  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    | ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||||       |||||||||||||||| |||    
T  50018242 tatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatc 50018341  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  50018342 attcaaattttgaaggattgtttaataaattgaattttaatggattttgt 50018391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 393 - 615
Target Start/End: Original strand, 37915767 - 37915989
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    ||||||||||||||||||||||||||||||||||  | ||       |||||||||||||||||||||||||| | |||||||||| |||||||||| ||    
T  37915767 aaaaagtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggta 37915866  T
Q  493 ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    ||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37915867 ttcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 37915966  T
Q  593 tgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||| |||||    
T  37915967 tgggattttgtagtgtactttta 37915989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 343 - 703
Target Start/End: Original strand, 41725015 - 41725372
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 442  Q
    ||||||||| ||||||||||||| | ||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||| ||        |     
T  41725015 gatgtattgaattaggattctataaaattttaaaagattttttaattataaaaaagtcttgtgatattcaatcaagattttttgcaacttaaaaaaaata 41725114  T
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||  ||| |||||||||||||||||||  |       |||||||| ||||||||||    
T  41725115 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaat 41725214  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnnt 639  Q
    ||||||||||| ||||||||||||||   |||||||||||||| ||||||||||||||| |||||||||||||   ||   |  ||||| ||       |    
T  41725215 cattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagat 41725311  T
Q  640 gagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
    |||||||||||   ||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  41725312 gagatttcttg---ttggttttattttaaaagttactatctttttcttctcttttctctctctc 41725372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 344 - 582
Target Start/End: Complemental strand, 49501828 - 49501588
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatc-aagactttttgcaatttnnnnnnn-gt 441  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||        ||    
T  49501828 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagt 49501729  T
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 541  Q
    ||||  |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||       ||||||||| ||||||||    
T  49501728 cttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaa 49501629  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  49501628 tcattcaaatttcgaatgattgtttaataaattggattttg 49501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 344 - 582
Target Start/End: Complemental strand, 49507893 - 49507653
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatc-aagactttttgcaatttnnnnnnn-gt 441  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||        ||    
T  49507893 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagt 49507794  T
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 541  Q
    ||||  |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||       ||||||||| ||||||||    
T  49507793 cttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaa 49507694  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  49507693 tcattcaaatttcgaatgattgtttaataaattggattttg 49507653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 25331018 - 25331293
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||           
T  25331018 gggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 25331117  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||| |||||||    
T  25331118 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaa 25331217  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  25331218 aatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 25331293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 28541590 - 28541860
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  28541590 tgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 28541689  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| |||||| | | ||||||||||||||| || |||| ||       |||| ||||||||||||||||    
T  28541690 gtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 28541789  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||| ||||| ||||| |||||||    
T  28541790 ttcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaatttta 28541860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 19741227 - 19740952
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||  || | |||||||  |||||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||| ||||||          
T  19741227 gggggatgtattcaatcatgattctaaaagattttaaaagacttttta-tcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaa 19741129  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| ||||||||||||| ||||||||||||  || ||||| || | |||||| ||||||||||| |||| ||       ||||||||||||| |    
T  19741128 agtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaa 19741029  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  19741028 aaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaatttta 19740952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 358 - 615
Target Start/End: Complemental strand, 32951137 - 32950880
Alignment:
Q  358 gattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatc 457  Q
    ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||||| |||||||||    
T  32951137 gattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatc 32951038  T
Q  458 aagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 557  Q
    |||| | |||||||||| ||| ||||| || | ||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||    
T  32951037 aagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 32950938  T
Q  558 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||  |||||||||| ||||||||||||||| ||||| |||||||    
T  32950937 ggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaatttta 32950880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 340 - 591
Target Start/End: Original strand, 12913110 - 12913362
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt-nnnnnn 438  Q
    |||||| |||| |||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||  |||||           
T  12913110 ggggatatattcgattaggaatctaagagattttaaaagattttttaattttgaaaaagtcttgtggtattcaatcaagactctttataatttaaaaaaa 12913209  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||  ||||||||||||       ||||  |||||||||    
T  12913210 agtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattca 12913309  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  12913310 aaatcattcaaattttgaaggattgtttaataaattggattttgtgggatttt 12913362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 22201902 - 22202177
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||           
T  22201902 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 22202001  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||||||||    
T  22202002 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 22202101  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||| ||||||| || |||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||    
T  22202102 aatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaatttta 22202177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 41881404 - 41881126
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnn 437  Q
    ||||| |||||||||| | |||| || | ||||||||||||||||||  || |||||||||||||||||||||||||||||||| ||| ||||||         
T  41881404 ggggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaa 41881305  T
Q  438 nngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtatt 536  Q
      |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||        || | ||||||||    
T  41881304 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtatt 41881205  T
Q  537 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  41881204 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 41881126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 39479676 - 39479399
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | |||| || || ||||||||||||||||| || || ||||||||||||||||||||||||||||| ||| ||||||           
T  39479676 gggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 39479577  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcattt--nnnnnnngtcttgtggtattc 537  Q
    |||||||| ||||||||||||| || ||||||||| ||| |||||||| | ||||||||||||||| || |||| ||         | ||||||||||||    
T  39479576 gtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattc 39479477  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  39479476 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 39479399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 524 - 704
Target Start/End: Original strand, 48261198 - 48261381
Alignment:
Q  524 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag--- 620  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||       
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  621 atttcttttatnnnnnnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |  ||||| ||       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 48261381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 1044696 - 1044969
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | ||||||| | |||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||| ||||||          
T  1044696 ggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 1044795  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| ||||||||||||| || ||||||||| |||  ||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||    
T  1044796 -gtcttgtgttattcaatcaagattccttgtcatttaaaa--agtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 1044892  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  1044893 aaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 1044969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 368 - 615
Target Start/End: Original strand, 55302758 - 55303005
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactcttt 467  Q
    ||||||| |||||||||| || |||||||||| || |||||||||||||||||| ||| ||||||       |||||||| | ||||||||||| |||||    
T  55302758 gattttagaagacttttttataatgaaaaagtgttatggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtttttcaatcaagattcttt 55302857  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttta 567  Q
    ||||||||||| ||||| || | ||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||    
T  55302858 gtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgttta 55302957  T
Q  568 ataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||  ||||||||||||| |||||||||||| ||||| |||||||    
T  55302958 ataaatcagattttgatggatattgtgggattttctagtgaaatttta 55303005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 440 - 593
Target Start/End: Original strand, 23987201 - 23987354
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||       ||||||||||||||||    
T  23987201 gtcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaa 23987300  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23987301 aatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgt 23987354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 368 - 601
Target Start/End: Complemental strand, 25504930 - 25504697
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactcttt 467  Q
    |||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| ||||     
T  25504930 gattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttg 25504831  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttta 567  Q
     |||||| ||| || ||||| ||||||||||||||||| || |||| ||       |||  ||| |||||||||||||||||||||||||||||||||||    
T  25504830 atcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgttta 25504731  T
Q  568 ataaattggattttgatggattttgtgggatttt 601  Q
    ||||||  ||||||||||||||||||||||||||    
T  25504730 ataaatcagattttgatggattttgtgggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 368 - 615
Target Start/End: Original strand, 7007288 - 7007536
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn-gtcttgtggtattcaatcaagactctt 466  Q
    |||||||| ||||||||| || |||||||||| ||||||||||||||||||||| ||| ||||||        |||||||| ||||||||||||| |||     
T  7007288 gattttaatagacttttttataatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattctc 7007387  T
Q  467 tgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttt 566  Q
    |||||||| ||| ||||| || | ||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||    
T  7007388 tgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgttt 7007487  T
Q  567 aataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||  |||||||||| ||||||||||||||| ||||| |||||||    
T  7007488 aataaatcagattttgatgaattttgtgggattttctagtgaaatttta 7007536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 23464840 - 23465117
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagacttttta--attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnn 437  Q
    ||||||||||||||||| ||||||| |  ||||||||||| |||||   || |||||||||||||||||||||||||||||||| ||| |||| |         
T  23464840 ggggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatataaaaa 23464939  T
Q  438 nngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
      |||||||  ||||||||||||| || ||||||||| ||| |||| |||  |||||||||||||||| || |||| ||       |||| |||||||||    
T  23464940 aagtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattc 23465039  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||| |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||  |||||||    
T  23465040 aaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 337 - 505
Target Start/End: Original strand, 37915669 - 37915837
Alignment:
Q  337 aggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnn 436  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||        
T  37915669 agggggggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgtaacttaaaa 37915768  T
Q  437 nnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagact 505  Q
       |||||||||||||||||||||||| ||||||| || ||| |||||||| | |||||||||||||||    
T  37915769 aaagtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagact 37915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 347 - 582
Target Start/End: Original strand, 5799872 - 5800107
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||||||| || |||||||||| ||| |||||||||||||| ||       || ||||    
T  5799872 tattagattaggattttatgggattttaaaagactttttaattatgaaaa-gttttgtggtattaaattaagactttttgcaacttaaaaaaagttttgt 5799970  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcat 545  Q
    |||||||||||||||||||||||||||||||| ||   ||||  ||||  ||||| ||||||||||| ||        ||||||||||||||||||||||    
T  5799971 ggtattcaatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcat 5800070  T
Q  546 tcaaatttcgaaggattgtttaataaattggattttg 582  Q
    ||||||||| |||||||||||||||||||||||||||    
T  5800071 tcaaatttcaaaggattgtttaataaattggattttg 5800107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 440 - 615
Target Start/End: Original strand, 9163063 - 9163238
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| | ||||||||||||| |||||||||  |       |||||||| |||||||    
T  9163063 gtcttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaa 9163162  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||| |||||||    
T  9163163 aatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaatttta 9163238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 20021230 - 20021404
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||  ||| || | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||          
T  20021230 gggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctttgcaatttaaaaaa 20021329  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca 513  Q
     || ||||||||||||||||||| |||||||||||||||| || ||||||  |||||||||||||||||||||||    
T  20021330 agttttgtggtattcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatca 20021404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 24131286 - 24131026
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  24131286 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 24131187  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||          |    
T  24131186 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt----------a 24131097  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  24131096 ttcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 24131026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 368 - 615
Target Start/End: Complemental strand, 34228873 - 34228627
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactcttt 467  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||| ||| ||||||||||||| |||||    
T  34228873 gattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtct-gtgttattcaatcaagattcttt 34228775  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttta 567  Q
    ||||||| ||| ||||| || | ||||||||||| | | || |||| ||       |||| |||||||||||||||||| |||||||||| |||||||||    
T  34228774 gtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaatgattgttta 34228675  T
Q  568 ataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||  |||||||||||||||||| ||||||| ||||| |||||||    
T  34228674 ataaatcagattttgatggattttgtaggattttctagtgaaatttta 34228627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 345 - 600
Target Start/End: Original strand, 1112786 - 1113040
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    |||||||||| | |||||||  |||||||||||||||||||  || |||||||||||||||| ||||||||||||||| ||| | ||||       || |    
T  1112786 tgtattggatcatgattcta--agattttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactctttccgatttaaaaaaagtat 1112883  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    |||  ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||||||||||||    
T  1112884 tgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatc 1112983  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattt 600  Q
    ||||||||||| || |||||||||||||||  |||||||||||||||||||||||||    
T  1112984 attcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattt 1113040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 46635957 - 46635692
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatg-aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    |||||||||| | ||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| ||| ||||||        |||    
T  46635957 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaatct 46635858  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    |||  ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       || | || ||||||||||||    
T  46635857 tgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatc 46635758  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||  ||||      |||||||||||||||| ||||| |||||||    
T  46635757 attcaaatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaatttta 46635692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 30009996 - 30009721
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | ||||||||||||| |||| |||||||||||||||| | |||||||||||||||| ||| ||||||           
T  30009996 gggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctttccaatttaaaaaaa 30009897  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| |||| |||||| | ||||| |||||| ||| ||||| || | ||||||||||||||| || |||| ||       |||| |||||||||||    
T  30009896 gtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 30009797  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||| ||||||  || |||||||||||||||  |||||||||||||||||||||||||| ||||  |||||||    
T  30009796 aatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaatttta 30009721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 345 - 607
Target Start/End: Complemental strand, 37046766 - 37046503
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| |  |||||||||||  |||| || || ||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  37046766 tgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 37046667  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtattcaaaatc 543  Q
    ||| ||||||||||||| |||||||||||| ||| |||| ||| | ||||||||||||||| || |||| ||        |||| ||| |||| ||||||    
T  37046666 gtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatc 37046567  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 607  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||||    
T  37046566 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtg 37046503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 440 - 582
Target Start/End: Complemental strand, 32684206 - 32684065
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||| |||| |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||       ||||||||||||||||    
T  32684206 gtcttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattcaa 32684108  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32684107 aatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 440 - 615
Target Start/End: Complemental strand, 44771073 - 44770897
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata-ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||| || ||||||||||| ||||||||| ||        |||  |||||||||    
T  44771073 gtcttgtgatattcaatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattca 44770974  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  44770973 aaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaatttta 44770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 391 - 615
Target Start/End: Original strand, 3436531 - 3436755
Alignment:
Q  391 tgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgaga 490  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||        | ||||| ||||||||||||| | |||||| ||| ||| || ||||| ||    
T  3436531 tgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaaatattgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtga 3436630  T
Q  491 tattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattt 590  Q
    ||||||||||||||| || |||||||        |||  ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  3436631 tattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattt 3436730  T
Q  591 tgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||| |||||||    
T  3436731 tgtgggattttgtagtgaaatttta 3436755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 440 - 615
Target Start/End: Original strand, 28370911 - 28371086
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| |||||| |||| ||       ||||  ||||||||||    
T  28370911 gtcttgtggtattcaatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaa 28371010  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||  |||||||||||||||||||| |||||| || ||||||||||||||| ||||| |||||||    
T  28371011 aatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 440 - 591
Target Start/End: Complemental strand, 36479450 - 36479299
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||| ||||||||| ||       |||| |||||||||||    
T  36479450 gtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaa 36479351  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36479350 aattattcaaatttcgaaggattatttaataaattggattttgatggatttt 36479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 345 - 591
Target Start/End: Complemental strand, 31315042 - 31314800
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||| ||||| || |||||||||| ||||||||||||||||||||||||| ||||||       |||||    
T  31315042 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtctt 31314943  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| |||| |||||||| |||||||||||| ||| |||||||| | |||    |||||||| || |||| ||       |||| ||||||||||||||||    
T  31314942 gtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtat----tcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 31314847  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||||||||||||||||||||||||||||  |||||||  |||||||    
T  31314846 ttcaaatttcgaaggattgtttaataaatcagattttgtgggatttt 31314800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 340 - 595
Target Start/End: Complemental strand, 40537464 - 40537214
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | |||| || | |||||||||||||||||  || || |||||||||||||||||||||| |||||| |||  |||||           
T  40537464 gggggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaa 40537365  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||||||| ||| || |||| ||           ||||||||||||    
T  40537364 gtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaa 40537270  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg 595  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||||||||    
T  40537269 aatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtgg 40537214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 7250087 - 7249809
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn-gtct 443  Q
    |||||||||| | ||||||| |  ||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||||||        ||||    
T  7250087 tgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttttcaatttaaaaaaaagtct 7249988  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnn-------gtcttgtggtatt 536  Q
    |||| ||||||||||||| |||| ||||||| ||| |  ||||| | ||||| ||||||||| || || | ||              |||| ||||||||    
T  7249987 tgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtattcgatcaagactcttgataacttaaaaaaaaaaaaaagtctagtggtatt 7249888  T
Q  537 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  7249887 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 7249809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 440 - 615
Target Start/End: Original strand, 12112932 - 12113107
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||| ||| || |||| ||       ||||  ||||||||||    
T  12112932 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaa 12113031  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||||| ||||| ||||| |||||||    
T  12113032 aatcattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaatttta 12113107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 443 - 615
Target Start/End: Complemental strand, 39307469 - 39307297
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||||||||||||||||||| | |||| ||||||||| |||||||| | ||||||||||||| | ||||||||||       ||||||||||||||| |||    
T  39307469 ttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataat 39307370  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||| || |||| |||||| |||||  |||||||| ||||||||||||||| ||||| |||||||    
T  39307369 cattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaatttta 39307297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 440 - 615
Target Start/End: Original strand, 25446038 - 25446212
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||  ||||||||||||| | |||||||||| ||| || ||||| | ||||||||||||||| || |||| ||       |||| |||||||||||    
T  25446038 gtcttgtattattcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 25446136  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  25446137 aatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaatttta 25446212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 28483870 - 28483954
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28483870 ggggatgtattgaattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgaggtattcaatcaagactttt 28483954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 340 - 500
Target Start/End: Original strand, 29855569 - 29855728
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||| ||||||||||||||||||||  ||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||||           
T  29855569 ggggatttattggattaggattctatggaattttaaaagatttttaaattatgaaaaagtcttgtgatattcaattaagactttttgcaatttaaaaaaa 29855668  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatca 500  Q
    || |||| ||||| |||||||||| |||||||||||||| || | ||||| ||||||||||    
T  29855669 gttttgt-gtatttaatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 23987142 - 23987300
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  ||||          
T  23987142 gggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactctttgtcattttaaaaa 23987241  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
     |||||| ||||||||||||| ||| ||  ||| || ||| |||||||| | |||||||    
T  23987242 agtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaa 23987300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 480 - 616
Target Start/End: Original strand, 42786711 - 42786847
Alignment:
Q  480 aagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt 579  Q
    |||||||| | ||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||   |||    
T  42786711 aagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatatt 42786810  T
Q  580 ttgatggattttgtgggattttgtagtgtaattttat 616  Q
    |||||||||||||||| ||||| ||||| ||||||||    
T  42786811 ttgatggattttgtggaattttctagtgaaattttat 42786847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 480 - 593
Target Start/End: Original strand, 28483926 - 28484039
Alignment:
Q  480 aagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt 579  Q
    |||||||||| ||||||||||||||||||||||| ||       |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28483926 aagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggatt 28484025  T
Q  580 ttgatggattttgt 593  Q
    |||  |||||||||    
T  28484026 ttgtaggattttgt 28484039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 524 - 615
Target Start/End: Original strand, 41320881 - 41320972
Alignment:
Q  524 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || ||||| |||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaatttta 41320972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 441 - 601
Target Start/End: Original strand, 53275827 - 53275987
Alignment:
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 540  Q
    ||||||| |||||||| |||| | |||||||||| ||| ||||||||   ||||||||||||| |||| |||| ||       |||| ||| |||| |||    
T  53275827 tcttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaa 53275926  T
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 601  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||    
T  53275927 atcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagatttt 53275987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 340 - 474
Target Start/End: Original strand, 41320637 - 41320769
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | |||||||  ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||| ||| ||||||           
T  41320637 gggggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaagtc--gtggtattcaatcaagactgtttccaatttaaaaaat 41320734  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattt 474  Q
    |||||||| ||||||||||||| ||||||||||||    
T  41320735 gtcttgtgttattcaatcaagattctttgtcattt 41320769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 36479506 - 36479422
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    |||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  36479506 ggggatgtattggattagaattctaaga-attttaaaaga-tttttaattatgaaaaagtcttgtggtattcaatcaaaactctttg 36479422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 346 - 426
Target Start/End: Original strand, 28370859 - 28370939
Alignment:
Q  346 gtattggattaggattcta-tgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  28370859 gtattggattaggattctaatga-attttaaaggactttttaattatgaaaaagtcttgtggtattcaatcaaaactctttg 28370939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 343 - 497
Target Start/End: Complemental strand, 32684261 - 32684108
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 442  Q
    ||||||||| |||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||  ||||       ||     
T  32684261 gatgtattgaattaggattctatagaattttaaaggactttttaattatgaaaaagtcttgtggtattcaattaagattctttgtcattttaaaaaagta 32684162  T
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
    ||| ||||||||||||||||| ||  ||| |||||| |||||||| | |||||||    
T  32684161 ttgaggtattcaatcaagacttttcatca-tttaaaaaagtcttgtggtattcaa 32684108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 344 - 432
Target Start/End: Original strand, 24736335 - 24736422
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 432  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||||| ||| |||||||| ||||||||||||||| ||||||||||    
T  24736335 atgtattggattaggattctaaggaattttaaaagattttttaattatg-aaatgtcttgtgatattcaatcaagactctttgcaattt 24736422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 367 - 496
Target Start/End: Complemental strand, 39307503 - 39307374
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctt 466  Q
    |||||||||||||| |||  ||||| ||||||| ||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||| ||||    
T  39307503 agattttaaaagacatttatattatcaaaaagttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattctt 39307404  T
Q  467 tgtcattttaaataagtcttgagatattca 496  Q
      |||||| ||| |||||||| | ||||||    
T  39307403 catcatttaaaaaaagtcttgtggtattca 39307374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 34141685 - 34141627
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaag 398  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  34141685 ggggatgtattggattaagattttatgagattttaaaagactttttaattatgaaaaag 34141627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 339 - 425
Target Start/End: Complemental strand, 36728132 - 36728046
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagacttttt 425  Q
    |||| ||| |||||||||  ||||||  ||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  36728132 ggggaatgaattggattataattctaacagattttaaaagattttttaattatgaaaaagtcttgtagtattcaatcaagatttttt 36728046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 614
Target Start/End: Complemental strand, 27454208 - 27454123
Alignment:
Q  529 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt 614  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||| ||||||||| ||||| ||||| ||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaatttt 27454123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 530 - 591
Target Start/End: Complemental strand, 56445474 - 56445413
Alignment:
Q  530 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggatttt 56445413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 339 - 463
Target Start/End: Original strand, 11090277 - 11090401
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||| |||| |||||| | | |||||||||| | ||||||||||||| || |||||||||||||||||||||| | ||||| | ||          
T  11090277 gggggatgtatttgattgggattccaagggattttaaaatattttttaattatgagaatgtcttgtggtattcaatcaagaatctttgccacttaaaaaa 11090376  T
Q  439 ngtcttgtggtattcaatcaagact 463  Q
     || |||||||||||||||||||||    
T  11090377 agttttgtggtattcaatcaagact 11090401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 340 - 421
Target Start/End: Original strand, 42786654 - 42786736
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagact 421  Q
    |||| |||||||||| | ||||||| | ||||||||||||||||||  || ||||||||||||||||||||||||||||||||    
T  42786654 gggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagact 42786736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 44646745 - 44646803
Alignment:
Q  366 gagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||    
T  44646745 gagattttaaaagactttttaatgataaaaaaatcttgtggtattcaatcaagactttt 44646803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 343 - 432
Target Start/End: Original strand, 467773 - 467862
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 432  Q
    |||||||||||||| ||||||  |  ||||||||||| ||||||||||||||||||| |||| ||||||||| |||| | ||||||||||    
T  467773 gatgtattggattatgattcttaggaattttaaaagattttttaattatgaaaaagttttgtcgtattcaattaagattatttgcaattt 467862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 424
Target Start/End: Complemental strand, 28100674 - 28100584
Alignment:
Q  334 ctaaggggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||| ||||||||||| |||||  | | | ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  28100674 ctaagggggg-tgtattggattgggatttcaaggggttttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagactttt 28100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 565 - 615
Target Start/End: Original strand, 8711978 - 8712028
Alignment:
Q  565 ttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaatttta 8712028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 334 - 424
Target Start/End: Original strand, 38230765 - 38230854
Alignment:
Q  334 ctaaggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||| ||||||| ||| |||||  | | |||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||    
T  38230765 ctaagggggg-tgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 38230854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 6334513 - 6334460
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaa 394  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  6334513 gggatgtgttggattaggattctaagagattttaaaagaatttttaattatgaa 6334460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 6335463 - 6335410
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaa 394  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  6335463 gggatgtgttggattaggattctaagagattttaaaagaatttttaattatgaa 6335410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 700
Target Start/End: Original strand, 23987393 - 23987454
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctct 700  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||||||||| | |||||||    
T  23987393 tgagatttcttgagattgtttttcttttaaaagttactatctctttcttctcctttctctct 23987454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 25446008 - 25446105
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctt 466  Q
    |||||||||||||||||| || |||||||||||||||  ||||||||||||| ||||||  ||||        ||||||||||||||||||||||||||    
T  25446008 gattttaaaagacttttttatcatgaaaaagtcttgtattattcaatcaaga-tttttgtcatttaaaaaaattcttgtggtattcaatcaagactctt 25446105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 425
Target Start/End: Original strand, 41762005 - 41762062
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagacttttt 425  Q
    |||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||    
T  41762005 gattttaaaagactttgtgattataaaaaagtcttgtggtattgaatcaagacttttt 41762062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 49501536 - 49501471
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||| ||||| ||||||||| | |||||||||||    
T  49501536 tgagatttcttgagattgtttttcttttaaaagttattatctctttcttctcctttctctctctct 49501471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 49507601 - 49507536
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||| ||||| ||||||||| | |||||||||||    
T  49507601 tgagatttcttgagattgtttttcttttaaaagttattatctctttcttctcctttctctctctct 49507536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 49834850 - 49834785
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| | |||||||||||||||| ||||||||| | |||||||||||    
T  49834850 tgagatttcttgagattgtttttctattaaaagttactatctatttcttctcctttctctctctct 49834785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 440 - 512
Target Start/End: Original strand, 11090336 - 11090408
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatc 512  Q
    |||||||||||||||||||||| |||||| || || ||| |||| ||| | ||||||||||||||||||||||    
T  11090336 gtcttgtggtattcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 28847188 - 28847104
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||  |||| ||   |||||||||||||||||| || || ||||||||| ||||||||||||||| ||||||    
T  28847188 ggggatgtattggattgagattttaaaggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaaaactttt 28847104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 37915730 - 37915798
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagactttt 508  Q
    |||||||||||||||||||||||| ||||| | || ||| |||||||| | ||||||||||||||||||    
T  37915730 gtcttgtggtattcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 443 - 615
Target Start/End: Complemental strand, 41582004 - 41581834
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    |||| ||| ||| |||||||  |||||||||||||| |||||||| | |||||| | |||| ||||| | | ||       |||| |||||||| | | |    
T  41582004 ttgtagtactcagtcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagt 41581905  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||| |||  ||||||||||||||||||  |||||  ||||||||||||||| ||||| |||||||    
T  41581904 cattcaaattttgaataattgtttaataaattgga--ttgatatattttgtgggattttctagtgaaatttta 41581834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 345 - 424
Target Start/End: Original strand, 53271912 - 53271991
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||| ||| |||||  ||| |||||||||||||||||| |  || ||||||||||||| ||||||||||||||||||    
T  53271912 tgtattgaattgggatttcatgggattttaaaagacttttttaaaataaaaaagtcttgtgatattcaatcaagactttt 53271991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 565 - 615
Target Start/End: Original strand, 24736447 - 24736497
Alignment:
Q  565 ttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaatttta 24736497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 376 - 426
Target Start/End: Complemental strand, 44771095 - 44771045
Alignment:
Q  376 aagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  44771095 aagactttttgattatgaaaaagtcttgtgatattcaatcaagactctttg 44771045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 8584063 - 8584007
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| ||| |  |||||||||||||||||||||||||| ||||    
T  8584063 gattttaaaagacttttttattttataaaagtcttgtggtattcaatcaagattttt 8584007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 641 - 689
Target Start/End: Complemental strand, 30967324 - 30967276
Alignment:
Q  641 agatttcttgtgattgtttttattttaaaagttactatctttttcttct 689  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  30967324 agatttcttgagattgttttttttttaaaagttactatctctttcttct 30967276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 339 - 391
Target Start/End: Complemental strand, 56445684 - 56445632
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattat 391  Q
    |||||||||||||||||| ||||||| |  |||||||||||||||||||||||    
T  56445684 gggggatgtattggattaagattctaaggaattttaaaagactttttaattat 56445632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 5800159 - 5800222
Alignment:
Q  641 agatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||| ||| |||||||||| |||||||||||| ||||| |||| |||| |||||||||||||    
T  5800159 agattttttgagattgtttttcttttaaaagttattatctctttcatctcttctctctctctct 5800222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 393 - 461
Target Start/End: Original strand, 9163058 - 9163126
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaaga 461  Q
    ||||||||||||||||||||||||||||| ||||  ||||       ||||||||||||||||||||||    
T  9163058 aaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 9163126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 366 - 417
Target Start/End: Original strand, 16018927 - 16018978
Alignment:
Q  366 gagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 417  Q
    |||||||||||||||||||||||||| ||||||| ||| |||| ||||||||    
T  16018927 gagattttaaaagactttttaattataaaaaagttttgaggtaatcaatcaa 16018978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 556 - 615
Target Start/End: Original strand, 20021436 - 20021495
Alignment:
Q  556 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||| || || |||||||    
T  20021436 aaggattgtttaataaattagattttgctggattttatgggattttttaatgaaatttta 20021495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 49469237 - 49469300
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 432  Q
    |||||||||||||||||  || |||| ||||||||||||||| |||||||||| ||| ||||||    
T  49469237 attttaaaagactttttttttgtgaagaagtcttgtggtatttaatcaagactctttccaattt 49469300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 40143801 - 40143858
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  40143801 agattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 5116986 - 5117038
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 419  Q
    |||||||||||||| |||||||||| ||||| ||||  |||||||||||||||    
T  5116986 agattttaaaagaccttttaattataaaaaaatcttaaggtattcaatcaaga 5117038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 44929875 - 44929959
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||| |||||||||||  |||| ||  ||||||||||| |||||||  || |  |||||||||||||||||||||||||| ||||    
T  44929875 gggggtgtattggattgagattttaaaagattttaaaatacttttttgttttataaaagtcttgtggtattcaatcaagattttt 44929959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 53594113 - 53594161
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 417  Q
    ||||||||||||||||| |||||  ||||||||||||| ||||||||||    
T  53594113 attttaaaagacttttttattatagaaaagtcttgtggcattcaatcaa 53594161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 54509740 - 54509796
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  54509740 gattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 16653281 - 16653336
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||| ||||||  |  ||||||||||||||||||||||||||| ||||    
T  16653281 attttaaaagacattttaaaaaaaaaaaagtcttgtggtattcaatcaagaatttt 16653336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 54853485 - 54853420
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttct-tctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||||| ||| | ||| |||| |||||||||||||    
T  54853485 tgagatttcttgagattgtttttcttttaaaagttactctctctctctctctc-tctctctctctct 54853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 414
Target Start/End: Original strand, 543888 - 543933
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaat 414  Q
    |||||||||||||||||||  || ||||||||||||| ||||||||    
T  543888 attttaaaagactttttaaaaataaaaaagtcttgtgatattcaat 543933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 485
Target Start/End: Original strand, 42786713 - 42786758
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtct 485  Q
    |||||||||||||||||||||||||||  |||||| ||| ||||||    
T  42786713 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtct 42786758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 47685169 - 47685226
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||||  || | ||||| ||||  ||||||||||||||||||||    
T  47685169 agattttaaaagacttttttgttttaaaaaaatctttaggtattcaatcaagactttt 47685226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 248; Significance: 1e-137; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 339 - 704
Target Start/End: Complemental strand, 14782454 - 14782086
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  14782454 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 14782355  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  14782354 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 14782255  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  14782254 aaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 14782155  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782154 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 14782086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 339 - 703
Target Start/End: Complemental strand, 44726129 - 44725762
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  44726129 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 44726030  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  44726029 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 44725930  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  44725929 aaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 44725830  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
       |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725829 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctc 44725762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 18959046 - 18958770
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||          
T  18959046 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattcaatcaagactttttgcaatttaaaaaa 18958947  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  18958946 agtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 18958847  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18958846 aaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaatttta 18958770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 347 - 703
Target Start/End: Complemental strand, 39467778 - 39467420
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||       |||||||    
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaa-gtcttgt 39467680  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  39467679 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatt 39467580  T
Q  547 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntgaga 643  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||   ||   |  ||||| ||       |||||    
T  39467579 caaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 39467480  T
Q  644 tttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
    ||| ||| |||||||||| |||||||||||||||||| ||||||||| | ||||||||||    
T  39467479 ttttttgagattgtttttcttttaaaagttactatctctttcttctcttttctctctctc 39467420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 343 - 704
Target Start/End: Complemental strand, 19718196 - 19717832
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 442  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||       |||    
T  19718196 gatgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattcaatcaagactttttgcaatttaaaaaaagtc 19718097  T
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||||||    
T  19718096 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 19717997  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnnt 639  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||   ||   |  ||||||||       |    
T  19717996 cattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagat 19717897  T
Q  640 gagatttcttgtgattgtttttattttaaaagttactatctttttct-tctcatctctctctctct 704  Q
    ||||||||||| |||||||||| |||||||||||||||||| | ||| |||| |||||||||||||    
T  19717896 gagatttcttgagattgtttttgttttaaaagttactatctctctctctctc-tctctctctctct 19717832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 341 - 704
Target Start/End: Original strand, 26855957 - 26856322
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 440  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||            
T  26855957 gggatgtattggattaggattctatgagattttaaaagacttt--aattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaa 26856054  T
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtctt-gagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    | |||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||       ||||||||||||||||    
T  26856055 tattgtggtattcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 26856154  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| |          
T  26856155 aatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaa 26856254  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      | |||||||||| |||||||||| |||||||||||||||||| ||||||||| | |||||||||||    
T  26856255 aataagatttcttgagattgtttttcttttaaaagttactatctctttcttctcttttctctctctct 26856322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 343 - 615
Target Start/End: Complemental strand, 10295696 - 10295423
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 442  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||    
T  10295696 gatgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaagaaaagtc 10295597  T
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    || ||| ||||||||||||||||| |||| || ||| |||||||||| ||||||||||||||||||||||| ||       |||||||||||||||||||    
T  10295596 ttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 10295497  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatgga-ttttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10295496 cattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaatttta 10295423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 9288769 - 9288500
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||          
T  9288769 gggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggt-------caagactttttgcaatttaaaaaa 9288677  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||| ||       |||||||||||||||    
T  9288676 agtcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattca 9288577  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9288576 aaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaatttta 9288500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 339 - 593
Target Start/End: Complemental strand, 42306104 - 42305850
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||          
T  42306104 gggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaagaatttttgcaatttaaaaaa 42306005  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||        ||||||||||||||    
T  42306004 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattca 42305905  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  42305904 aaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt 42305850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 339 - 582
Target Start/End: Complemental strand, 4031577 - 4031334
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||          
T  4031577 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagactttttgcaatttaaaaaa 4031478  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||| | ||       |||||||||||||||    
T  4031477 agtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattca 4031378  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4031377 aaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 340 - 593
Target Start/End: Original strand, 7466223 - 7466476
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||           
T  7466223 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 7466322  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||       ||||||||||||||||    
T  7466323 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaa 7466422  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||||| |||| |||||||||||||||||||||||  |||||||||    
T  7466423 aatcattcaaattttgaagaattgtttaataaattggattttgtgggattttgt 7466476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 340 - 693
Target Start/End: Complemental strand, 18306279 - 18305933
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||| ||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||           
T  18306279 ggggatgtattgaattaggattctatggaattttagaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 18306180  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       ||||||||||||||||    
T  18306179 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 18306080  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    |||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||   ||   |  ||||| ||         
T  18306079 aatcattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 18305990  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatc 693  Q
      |||||||||||| ||||||| || |||||||||||||||||| ||||||||||||    
T  18305989 gatgagatttcttgagattgttattcttttaaaagttactatctctttcttctcatc 18305933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 340 - 593
Target Start/End: Original strand, 16362084 - 16362337
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||           
T  16362084 ggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgtaacttaaaaaaa 16362183  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
     ||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||       |||| |||||||||||    
T  16362184 atcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaa 16362283  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16362284 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 4402994 - 4403270
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||          
T  4402994 gggggatgtattggattatgattatatgagattttaaaagactttttaattgtgaaaaagtcttttggtattcaatcaaaactttttgcaacttaaaaaa 4403093  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||| || |||||||||| || ||||||  |||||||| |||| ||||||||| ||        ||| ||||||||||    
T  4403094 agtcttgtggtattcaatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattca 4403193  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  4403194 aaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaatttta 4403270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 340 - 582
Target Start/End: Original strand, 31623583 - 31623825
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| || ||           
T  31623583 ggggatgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattcaatcaagactttttgtaacttaaaaaaa 31623682  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||  ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||||||    
T  31623683 gtctcttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 31623782  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31623783 aatcattcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 26374747 - 26374473
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  26374747 gggggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaa 26374648  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||  |||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||    
T  26374647 agt--tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 26374550  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  26374549 aaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 26374473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 42735596 - 42735320
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||          
T  42735596 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 42735497  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| ||||||||||||| ||||| |||||| ||| ||| |||| | |||||||| |||||| || |||| ||       |||| ||||||||||    
T  42735496 agtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattca 42735397  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  42735396 aaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 42735320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 347 - 615
Target Start/End: Complemental strand, 42938428 - 42938160
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    ||||||||||  ||| || | |||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||| ||||||       |||||||    
T  42938428 tattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgt 42938329  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
    | ||||||||||||| | |||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||||||||    
T  42938328 gttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 42938229  T
Q  547 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  42938228 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 42938160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 393 - 593
Target Start/End: Original strand, 32497466 - 32497666
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    ||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||| |||||||||||||||||| |||||||||| ||    
T  32497466 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggta 32497565  T
Q  493 ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    ||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  32497566 ttcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttg 32497665  T
Q  593 t 593  Q
    |    
T  32497666 t 32497666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 340 - 614
Target Start/End: Complemental strand, 23115486 - 23115213
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||           
T  23115486 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 23115387  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| | |||||| | ||||||||||||||| || |||| ||       |||| ||||||||| |    
T  23115386 gtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc-a 23115288  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt 614  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| || || ||||||    
T  23115287 aatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaatttt 23115213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 337 - 607
Target Start/End: Complemental strand, 2705140 - 2704870
Alignment:
Q  337 aggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnn 436  Q
    ||||||| |||||||||| | |||| ||   |||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||| ||| ||        
T  2705140 agggggggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaaa 2705041  T
Q  437 nnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtatt 536  Q
       |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||    
T  2705040 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatt 2704941  T
Q  537 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 607  Q
    ||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||| |||||    
T  2704940 caaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtg 2704870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 5576939 - 5576663
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||||| ||||||| | |||||||||||| |||||  | |||||| ||||||||||||||||||||||||| ||| ||||||           
T  5576939 gggggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 5576840  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtattca 538  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||        |||  ||||||||||    
T  5576839 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattca 5576740  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||| ||||| |||||||    
T  5576739 aaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaatttta 5576663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 440 - 615
Target Start/End: Complemental strand, 43166908 - 43166733
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||||||| ||||  |||| ||| |||||||| | ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  43166908 gtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaa 43166809  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43166808 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaatttta 43166733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 7507212 - 7506942
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||          ||    
T  7507212 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaagttt 7507113  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||| ||| || ||||||||| | | |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||| ||    
T  7507112 gtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaacca 7507013  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  7507012 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 7506942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 345 - 582
Target Start/End: Complemental strand, 32711595 - 32711358
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| |||| ||||||||||||||| || |||||||||| ||||||||||||||||||||| ||| ||||||       |||||    
T  32711595 tgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 32711496  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||||||    
T  32711495 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 32711396  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttg 582  Q
    || ||||||||||||||||||||||||||  |||||||    
T  32711395 tttaaatttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 345 - 591
Target Start/End: Original strand, 41478990 - 41479236
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  41478990 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtttt 41479089  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       ||||  |||||||||||||||    
T  41479090 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatca 41479189  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    ||||||||||||| |||||||||||||||  |||||||  |||||||    
T  41479190 ttcaaatttcgaatgattgtttaataaatcagattttgtgggatttt 41479236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 368 - 595
Target Start/End: Original strand, 43959573 - 43959800
Alignment:
Q  368 gattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctt 466  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| ||||    
T  43959573 gattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctt 43959672  T
Q  467 tgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttt 566  Q
    |||||||||||| |||||||| | ||||||||||||| | || |||| ||       | || ||||||||||||||||||||||||||||| ||||||||    
T  43959673 tgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgttt 43959771  T
Q  567 aataaattggattttgatggattttgtgg 595  Q
    |||||||  ||||||||||||||||||||    
T  43959772 aataaatcagattttgatggattttgtgg 43959800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 344 - 497
Target Start/End: Complemental strand, 43166962 - 43166809
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    ||||||||||||| |||| |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||    
T  43166962 atgtattggattaagattttatgggattttaaaatactttttaattaagaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtct 43166863  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | |||||||    
T  43166862 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaa 43166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 449 - 615
Target Start/End: Complemental strand, 10392446 - 10392280
Alignment:
Q  449 tattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 548  Q
    ||||||||||||| |||||||||||||||| || ||||| |||||||||||||||||||| |||| ||       |||| |||||||||| |||||||||    
T  10392446 tattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattca 10392347  T
Q  549 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  10392346 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 10392280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 440 - 615
Target Start/End: Complemental strand, 24502031 - 24501856
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| ||||| |||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||||||||    
T  24502031 gtcttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 24501932  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  24501931 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 24501856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 42937253 - 42937514
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | |||| || | |||||||||||||||||| || ||||||||||||||||||||||||||||          |||||       |||||    
T  42937253 tgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaacca-------aatttaaaaaaagtctt 42937345  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| | |||||||||| ||| |||||||| | |||||||||  |||| || |||| ||       |||| ||||||||||||||||    
T  42937346 gtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatca 42937443  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  42937444 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 42937514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 342 - 501
Target Start/End: Original strand, 32497373 - 32497532
Alignment:
Q  342 ggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 441  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||       ||    
T  32497373 ggatgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagt 32497472  T
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaa 501  Q
    |||||||||||||||||||||| ||||  | || ||| || ||||| | |||||||||||    
T  32497473 cttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaa 32497532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 344 - 485
Target Start/End: Complemental strand, 39190085 - 39189944
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||    | ||||||||||||||||||||| ||||||||||       ||||    
T  39190085 atgtattggattaggattctaagggattttaaaagactttttaattatgaattttttttgtggtattcaatcaagactctttgcaatttaaaaaaagtct 39189986  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtct 485  Q
    ||||||||||||| || ||||||| |||||| ||| ||||||    
T  39189985 tgtggtattcaataaaaactctttatcatttaaaaaaagtct 39189944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 344 - 417
Target Start/End: Complemental strand, 43308593 - 43308520
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 417  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43308593 atgtattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcttctggtattcaatcaa 43308520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 480 - 593
Target Start/End: Original strand, 37857147 - 37857260
Alignment:
Q  480 aagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt 579  Q
    |||| ||||| |||||||| |||| ||||||||| ||       ||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  37857147 aagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggatt 37857246  T
Q  580 ttgatggattttgt 593  Q
    ||||||||||||||    
T  37857247 ttgatggattttgt 37857260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 443 - 592
Target Start/End: Complemental strand, 39190028 - 39189881
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||||||||||||||||||||||||||  |||| ||| |||||||| | |||||||| || ||| || |||||||       ||||  || ||||||| ||    
T  39190028 ttgtggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacat 39189930  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  39189929 cattcaaatttcgaaggattgtttaataaatt-gaatttgatggattttg 39189881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 8410526 - 8410455
Alignment:
Q  530 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 601  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggatttt 8410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 524 - 615
Target Start/End: Complemental strand, 4950150 - 4950059
Alignment:
Q  524 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||| ||||||||||||||||||| |||| || |||| ||||||||||| |||||||||||| ||||||| ||||| ||||| |||||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaatttta 4950059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 24502090 - 24501963
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | |||||||   |||||||||||||||||| || |||||||||||||||| ||||||||||||| | |||   ||||          
T  24502090 ggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaa 24501991  T
Q  439 ngtcttgtggtattcaatcaagactctt 466  Q
     |||||||||||||||||||||||||||    
T  24501990 agtcttgtggtattcaatcaagactctt 24501963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 601
Target Start/End: Complemental strand, 13478384 - 13478307
Alignment:
Q  524 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 601  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||| | |||||||||| |||||||    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggatttt 13478307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 345 - 432
Target Start/End: Complemental strand, 24214904 - 24214817
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 432  Q
    |||||||||| | |||||||   |||||||||||||||||| || || ||||||||||||||||||||||||||||| ||| ||||||    
T  24214904 tgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaattt 24214817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 358 - 421
Target Start/End: Original strand, 26373711 - 26373774
Alignment:
Q  358 gattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 421  Q
    ||||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  26373711 gattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 26373774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 341 - 424
Target Start/End: Original strand, 37857092 - 37857175
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||| ||||||||||| ||| || | |||||||||||| ||||||||||||||||||| ||| |||||||||| |||| ||||    
T  37857092 gggatatattggattagaattttacgggattttaaaagattttttaattatgaaaaagttttgaggtattcaattaagattttt 37857175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 374 - 581
Target Start/End: Original strand, 41069866 - 41070074
Alignment:
Q  374 aaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcatt 473  Q
    |||||||||||| ||||| ||||||| || ||||||||||| |||| | ||| ||| ||       ||||| || ||||||||||||||| |  ||||||    
T  41069866 aaaagactttttcattataaaaaagttttctggtattcaataaagattctttacaacttaaaaaatgtcttatgatattcaatcaagactttacgtcatt 41069965  T
Q  474 ttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnng-tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 572  Q
    |  || |||| ||| | ||||||| ||||||| ||||| ||||         |||||||||||| |||||||||| |||||| || |||||||| |||||    
T  41069966 tataaaaagttttgtggtattcaaccaagactcttcataatttaaaaaaaaatcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaa 41070065  T
Q  573 ttggatttt 581  Q
    ||| |||||    
T  41070066 ttgaatttt 41070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 340 - 415
Target Start/End: Complemental strand, 4950291 - 4950218
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatc 415  Q
    |||| |||||||||||| ||||||| |||||||||| ||||||||| |||||| ||||||| ||||||||| ||||    
T  4950291 gggggtgtattggattaagattctaagagattttaatagacttttt-attatg-aaaagtcatgtggtatttaatc 4950218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 639 - 690
Target Start/End: Original strand, 7466515 - 7466566
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctc 690  Q
    |||||||||||| |||||||||| ||||||||||||| |||| |||||||||    
T  7466515 tgagatttcttgagattgtttttcttttaaaagttacgatctctttcttctc 7466566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 345 - 424
Target Start/End: Original strand, 14061549 - 14061628
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||| ||| ||||| ||||  ||||||||||||||||| |   | ||||||||||||||||||||||||||| ||||    
T  14061549 tgtattgtattgggattttatggaattttaaaagacttttttaaagtaaaaaagtcttgtggtattcaatcaagattttt 14061628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 417
Target Start/End: Original strand, 35142068 - 35142117
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 417  Q
    ||||||||||||||||||  || | |||||||||||||||||||||||||    
T  35142068 gattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaa 35142117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 1606071 - 1606015
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  1606071 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 1606015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 2112817 - 2112873
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  2112817 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 2112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 533 - 581
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  533 tattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 581  Q
    |||||||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 17790434 - 17790518
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||| |||||||||||  ||||  | |||||||||||||||||||| || || | ||| | |||||||||||||||| |||||||    
T  17790434 gggggtgtattggattgagatttcaagagattttaaaagactttttgatgataataaaattttgtggtattcaatcatgactttt 17790518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 29260334 - 29260278
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  29260334 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 29260278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 32497429 - 32497497
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagactttt 508  Q
    |||||||||||||||||||||||| |||   | || ||| |||||||| | ||||||||||||||||||    
T  32497429 gtcttgtggtattcaatcaagactttttacaacttaaaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 639 - 699
Target Start/End: Complemental strand, 43166706 - 43166647
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctc 699  Q
    |||||||||||| ||||| |||| |||||||||||||||||| |||| |||| ||||||||    
T  43166706 tgagatttcttgagattggttttcttttaaaagttactatctctttcctctc-tctctctc 43166647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 43605422 - 43605366
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  43605422 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 43605366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 8502654 - 8502713
Alignment:
Q  365 tgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||||||  || | |||||||||||||||||| ||| |||| ||||    
T  8502654 tgagattttaaaagactttttcgttttaaaaaagtcttgtggtatttaattaagattttt 8502713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 10802828 - 10802773
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||| ||| |  ||||||||| |||||||||||||||| ||||    
T  10802828 attttaaaagacttttttattttataaaagtcttctggtattcaatcaagattttt 10802773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 615
Target Start/End: Original strand, 32497647 - 32497678
Alignment:
Q  584 tggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||    
T  32497647 tggattttgtgggattttgtagtgtaatttta 32497678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 678
Target Start/End: Original strand, 32497705 - 32497744
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactat 678  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  32497705 tgagatttcttgagattgtttttcttttaaaagttactat 32497744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 30382732 - 30382678
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactt 422  Q
    ||||||||||||||||||  || | ||||||||||  ||||||||||||||||||    
T  30382732 gattttaaaagacttttttgtttttaaaaagtctttaggtattcaatcaagactt 30382678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 37857299 - 37857364
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttct-tctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||||| ||| | ||| |||| |||||||||||||    
T  37857299 tgagatttcttgagattgtttttcttttaaaagttactctctctctctctctc-tctctctctctct 37857364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 4302866 - 4302813
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 421  Q
    ||||||||||||||||||  || | ||||||||||  |||||||||||||||||    
T  4302866 gattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagact 4302813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 676
Target Start/End: Original strand, 4403297 - 4403334
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttact 676  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  4403297 tgagatttcttgggattgtttttcttttaaaagttact 4403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 368 - 417
Target Start/End: Original strand, 7148072 - 7148121
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 417  Q
    ||||||||||||||||||  || |  ||||||||||||||||||||||||    
T  7148072 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaa 7148121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 676
Target Start/End: Complemental strand, 9288473 - 9288436
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttact 676  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  9288473 tgagatttcttgagattgtttttcttttaaaagttact 9288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 23185725 - 23185774
Alignment:
Q  370 ttttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 419  Q
    ||||||||||||||||| |||| ||||| ||| | |||||||||||||||    
T  23185725 ttttaaaagactttttacttataaaaaaatctcgaggtattcaatcaaga 23185774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 248; Significance: 1e-137; HSPs: 111)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 339 - 704
Target Start/End: Complemental strand, 36674450 - 36674082
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  36674450 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 36674351  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  36674350 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 36674251  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  36674250 aaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 36674151  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674150 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 36674082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 339 - 704
Target Start/End: Complemental strand, 44906833 - 44906465
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  44906833 gggggatatattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 44906734  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||||||||||||||    
T  44906733 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 44906634  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||   || ||||| ||        
T  44906633 aaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaa 44906534  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||| |||||||||||||||||| ||||||||| | |||||||||||    
T  44906533 agatgagatttcttgagattgtttttcttttaaaagttactatctctttcttctcctttctctctctct 44906465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 11431412 - 11431688
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  11431412 gggggatgtattggattaggattctataagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 11431511  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  11431512 agtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 11431611  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11431612 aaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaatttta 11431688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 339 - 704
Target Start/End: Complemental strand, 52618285 - 52617923
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||          
T  52618285 gggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagattttttgtaacttaaaaaa 52618186  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||||||||||||||    
T  52618185 agtcatgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 52618086  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgagatttcttttatnnnnnnn 638  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |  ||||| ||           
T  52618085 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta---acaagtctttcataaaaaga 52617989  T
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||||||||| | |||||||||||    
T  52617988 tgagatttcttgagattgtttttcttttaaaagttactatctctttcttctcctttctctctctct 52617923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 10660421 - 10660765
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  10660421 gggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 10660520  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       || ||||||||||||    
T  10660521 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattca 10660620  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgagatttcttttatnnnnnnn 638  Q
    |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||   | |        ||           
T  10660621 aaatcattcaaatttcgaaggattgtttaataaattggattttgatg----------gattttgtagtgtaatttta---aca--------atgaaaaga 10660699  T
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10660700 tgagatttcttgagattgtttttattttaaaagttactatttttttcttctcatctctctctctct 10660765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 31646604 - 31646328
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  31646604 gggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 31646505  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||| |||||||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||||        ||||||||||||||    
T  31646504 agtcttatggtattcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattca 31646405  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31646404 aaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaatttta 31646328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 350 - 704
Target Start/End: Original strand, 54628740 - 54629098
Alignment:
Q  350 tggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggt 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||       ||||||||||    
T  54628740 tggattaggattctatgagattttaaaagactttttaattatgaaaacgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggt 54628839  T
Q  450 attcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtattcaaaatcattca 548  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||            ||||||||||||||||||||||||    
T  54628840 attcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattca 54628939  T
Q  549 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntgagatt 645  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||       |||||||    
T  54628940 aatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatt 54629039  T
Q  646 tcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||||||| | |||||||||    
T  54629040 tcttgagattgtttttcttttgaaagttactatctctttcttctcatttttctctctct 54629098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 26107147 - 26107515
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| ||          
T  26107147 gggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtaatattcaatcaagactttttgcaacttaaaaaa 26107246  T
Q  439 ngtctt-gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
     ||||| || ||| |||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||||    
T  26107247 -gtcttagtcgtactcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattc 26107345  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnn 634  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||   |  | ||| ||       
T  26107346 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaa 26107445  T
Q  635 nnnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
        |||||||||||| |||||||||| |||||||||||||| ||| ||||||||| |||||||||||||    
T  26107446 aagatgagatttcttgagattgtttttcttttaaaagttactttctctttcttctcctctctctctctct 26107515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 51738044 - 51737770
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||| ||           
T  51738044 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaa--aagacttttagcaacttaaaaaaa 51737947  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataa-gtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
    |||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||||||||||||||||||| ||       |||||||||||||||    
T  51737946 gtcttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 51737847  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51737846 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaatttta 51737770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 40897030 - 40897306
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||||||| ||          
T  40897030 ggggatgtattggattaggattctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaa 40897129  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||| |||||||||    
T  40897130 agtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattca 40897229  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40897230 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaatttta 40897306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 339 - 582
Target Start/End: Complemental strand, 23753706 - 23753463
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  23753706 gggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 23753607  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  23753606 agtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 23753507  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23753506 aaatcattcaaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 50903563 - 50903284
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||| |||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||          
T  50903563 gggggatgtattgaattatgattctatgggattttaaaatactttttaagtatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 50903464  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcattt---nnnnnnngtcttgtggtat 535  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||| |||||||          ||||||||||||    
T  50903463 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtat 50903364  T
Q  536 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50903363 tcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 50903284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 343 - 703
Target Start/End: Original strand, 48379048 - 48379410
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 442  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||| ||        ||    
T  48379048 gatgtattggattatgattctataggattttaaaagactttttaattatcaaaaagtctcgtggtattcaatcaaaattttttgcaacttaaaaaaaatc 48379147  T
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||||| | |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| ||       |||||||||||||||||||    
T  48379148 ttgtgat-ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 48379246  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnnt 639  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||   || ||||| ||       |    
T  48379247 cattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagat 48379346  T
Q  640 gagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
     |||||||||| |||||||||| ||||||| |||||||||| ||||||||| | ||||||||||    
T  48379347 cagatttcttgagattgtttttcttttaaatgttactatctctttcttctcctttctctctctc 48379410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 339 - 593
Target Start/End: Complemental strand, 50762370 - 50762116
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||          
T  50762370 gggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaa 50762271  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||       |||||||||||||||    
T  50762270 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattca 50762171  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  50762170 aaatcattctaatttcgaatgattgtttgataaattggattttgatggattttgt 50762116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 340 - 700
Target Start/End: Original strand, 32580063 - 32580426
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||||||||  ||||||||||||| ||||| ||||||           
T  32580063 ggggatgtattggattaggattctatgagattttaaaaaaaattt-aattatgaaaaagtcttgtaatattcaatcaagattttttacaatttaaaaaaa 32580161  T
Q  440 gtc--ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
         ||||||||||| |||||| ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||       ||||||||||||||    
T  32580162 aaaatttgtggtattcgatcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattc 32580260  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnn 634  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||   |  ||||| ||       
T  32580261 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 32580360  T
Q  635 nnnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctct 700  Q
        |||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  32580361 aagatgagatttcttgagattgtttttattttaaaaattactatctttttcttcttatctctctct 32580426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 20832882 - 20833154
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| || ||           
T  20832882 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaa--- 20832978  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||       ||||||||||||||||    
T  20832979 gtctcgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaa 20833078  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  20833079 aatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaatttta 20833154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 440 - 704
Target Start/End: Complemental strand, 34484249 - 34483982
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       || |||||||||||||    
T  34484249 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaa 34484150  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||         
T  34484149 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaa 34484050  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      |||||||||||| |||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  34484049 gatgagatttcttgagattgtttttgttttaaaagttactatctctttcttctcatttctctctctct 34483982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 440 - 704
Target Start/End: Original strand, 17946275 - 17946541
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||| ||| |||||||    
T  17946275 gtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaa 17946374  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||         
T  17946375 aatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 17946474  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      |||||||||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  17946475 gatgagatttcttgagattgtttttcttttaaaagttactatctatttcttctc-tctctctctctct 17946541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 347 - 615
Target Start/End: Original strand, 19253721 - 19253989
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    |||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||||    
T  19253721 tattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 19253820  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
    | ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||||||||    
T  19253821 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 19253920  T
Q  547 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  19253921 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 19253989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 20498096 - 20498371
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | ||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||||          
T  20498096 ggggggtgtattggatcatgattctaagggattttaaaagacttttta-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 20498194  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     || ||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||    
T  20498195 agttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 20498294  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  20498295 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 20498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 358 - 615
Target Start/End: Original strand, 35337640 - 35337897
Alignment:
Q  358 gattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatc 457  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||       |||||||| |||||||||    
T  35337640 gattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatc 35337739  T
Q  458 aagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 557  Q
    |||| || ||||||||||||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||||||||||  ||||||||||||||    
T  35337740 aagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaa 35337839  T
Q  558 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  35337840 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 35337897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 393 - 704
Target Start/End: Original strand, 18749552 - 18749865
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    ||||||||||||||||||||||||||||| ||||  ||||       |||||| ||||||||||||| ||| ||  ||| |||||| |||||||||| ||    
T  18749552 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggta 18749651  T
Q  493 ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    |||||| || ||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749652 ttcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 18749751  T
Q  593 tgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttct 689  Q
    |||||||||||||||||||||||   ||   |  ||||| ||       |||||||||||| |||||||||| |||||||||||||||||| |||| |||    
T  18749752 tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatctctttc-tct 18749850  T
Q  690 catctctctctctct 704  Q
    | | |||||||||||    
T  18749851 cctttctctctctct 18749865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 347 - 615
Target Start/End: Complemental strand, 37820789 - 37820521
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    |||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||||    
T  37820789 tattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 37820690  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
    | ||||||||||||| |||||||||||| ||| || ||||| | ||||||||||||| | || |||| ||       |||| ||||||||||||||||||    
T  37820689 gttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 37820590  T
Q  547 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||| |||||||    
T  37820589 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaatttta 37820521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 996404 - 996130
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| |||||            
T  996404 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatt-aaaaaaa 996306  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| ||||| |||||| ||| |||||||| | ||||||||||||| | || |||| ||       |||| |||||||||||    
T  996305 gtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaa 996206  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  996205 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 996130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 352 - 615
Target Start/End: Complemental strand, 6035359 - 6035097
Alignment:
Q  352 gattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtat 451  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||       || |  ||||||    
T  6035359 gattaagattttatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagtttttttgcaacttaaataaagt-tcatggtat 6035261  T
Q  452 tcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 551  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||       |||| ||| |||||||||||||||||||    
T  6035260 tcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaat 6035161  T
Q  552 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||  |||||||    
T  6035160 ttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaatttta 6035097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 10139465 - 10139190
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| ||||||| || | ||||||| | |||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||| ||||||           
T  10139465 gggggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 10139366  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| || || |||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||||||||    
T  10139365 gtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 10139266  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  10139265 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 10139190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 443 - 704
Target Start/End: Original strand, 52810368 - 52810631
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||       |||||||||||||||||||    
T  52810368 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 52810467  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnnt 639  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||   ||   |  ||||| ||       |    
T  52810468 cattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagat 52810567  T
Q  640 gagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    ||||||||||| |||||||||| |||||||||  ||||||| ||||| ||| |||||||||||||    
T  52810568 gagatttcttgagattgtttttcttttaaaagaaactatctctttctcctc-tctctctctctct 52810631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 345 - 513
Target Start/End: Original strand, 18749462 - 18749630
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||    
T  18749462 tgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 18749561  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca 513  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  18749562 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatca 18749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 340 - 494
Target Start/End: Complemental strand, 27240562 - 27240408
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||           
T  27240562 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 27240463  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatatt 494  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  27240462 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 3206510 - 3206249
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  3206510 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 3206411  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||||||||||||||||| |||||         || |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||||||    
T  3206410 gtggtattcaatcaagattcttt---------aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 3206320  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  3206319 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 3206249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 6589450 - 6589726
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||| | ||||||| | || |||||||||||||||  || ||||||||||||||||||||||||| |||||| |||  |||||          
T  6589450 ggggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaa 6589549  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| ||||||||||| | || ||||||||| ||| |||||||| | ||||||||||||||| || |||||||       |||| ||||||||||    
T  6589550 agtcttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattca 6589649  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  6589650 aaatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 6589726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 347 - 591
Target Start/End: Original strand, 6975643 - 6975884
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    ||||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||| ||||||   |||||| |||| || ||       |||||||    
T  6975643 tattggattaggattctatgaaattttaaaatattttttaatgatgaaaaagtcttgtgatattcagcgaagactctttgtaacttaaaaaaagtcttgt 6975742  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  6975743 ggtattcaatcaagactctttgttattttaaa-aagtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattcaaaatcatt 6975839  T
Q  547 caaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||||||||||| ||| |||| ||||||||| ||||  |||||||    
T  6975840 caaatttcgaagaattatttactaaattggaatttgtgggatttt 6975884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 339 - 614
Target Start/End: Original strand, 40246730 - 40247005
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | ||||||| |||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||| |||    |||          
T  40246730 ggggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattcaatcaagactctttctggtttaaaaaa 40246829  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
      ||||||| ||||||||||||| |||||||||||| ||| |||| ||| | ||||||||||||||| || |||| ||       |||| ||||||||||    
T  40246830 aatcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattca 40246929  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt 614  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  40246930 aaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttt 40247005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 368 - 615
Target Start/End: Complemental strand, 44762328 - 44762081
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactcttt 467  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| |||||    
T  44762328 gattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattcttt 44762229  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttta 567  Q
    ||||||| ||| ||||| ||   ||||||||||||||| || |||| ||       |||| |||||||| ||||| |||||| |||||||||||||||||    
T  44762228 gtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgttta 44762129  T
Q  568 ataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  44762128 ataaatcagattttgatggattttgtgggattttttagtgaaatttta 44762081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 440 - 593
Target Start/End: Complemental strand, 10728860 - 10728707
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||| ||    
T  10728860 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaa 10728761  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10728760 aatcattcaaatttggaaggattgtttaataaattggattttgatggattttgt 10728707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 443 - 593
Target Start/End: Original strand, 39038030 - 39038180
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||||||||||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39038130 cattcaaatttcgaagaattgtttaataaattggattttgatggattttgt 39038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 340 - 601
Target Start/End: Complemental strand, 1440270 - 1440010
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||||| | | ||||||| |||||||||||| |||||||| | |||||||||||||||||||||||||||||||| ||| ||||||           
T  1440270 ggggatgtattgggtcatgattctaagagattttaaaatacttttta-tcatgaaaaagtcttgtggtattcaatcaagactattttcaatttaaaaaa- 1440173  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataa-gtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
    |||||||| ||||||||||||| |||||||||||| ||| || || ||| | ||||||||||||||| || |||| ||       |||| ||||||||||    
T  1440172 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 1440073  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 601  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||||||    
T  1440072 aaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 342 - 615
Target Start/End: Original strand, 29029895 - 29030167
Alignment:
Q  342 ggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 441  Q
    ||||||||||||| | ||||||| | |||||||||||||||||  || |||||||| | |||||||||||||||||||||  ||  ||||        ||    
T  29029895 ggatgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaaatattgtggtattcaatcaagactcattctaattaagaaaaagt 29029994  T
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 541  Q
    |||||| |||||||| ||||||||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       ||||||||||||||||||    
T  29029995 cttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaa 29030093  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||| || || |||||||    
T  29030094 tcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaatttta 29030167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 443 - 593
Target Start/End: Original strand, 37454851 - 37455001
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  37454851 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 37454950  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||| ||||||||||||||||| ||||||  |||||||||    
T  37454951 cattcaaatttcgaatgattgtttaataaattgaattttgtgggattttgt 37455001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 368 - 615
Target Start/End: Complemental strand, 29449151 - 29448902
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn--gtcttgtggtattcaatcaagactct 465  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||| ||| ||         |||||||| ||||||||||||| ||     
T  29449151 gattttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaatactctttccaaatttaaaaaaaagtcttgtgttattcaatcaagattcc 29449052  T
Q  466 ttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 565  Q
    |||||||||  || |||||||| ||||||||||||||||| |  |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  29449051 ttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 29448952  T
Q  566 taataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||  |||||||||||||||||||||||||| ||||  |||||||    
T  29448951 taataaatcagattttgatggattttgtgggattttctagtaaaatttta 29448902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 33808121 - 33807842
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggt---attcaatcaagactttttgcaatttnnnn 436  Q
    |||| ||||||| || | ||||||| | |||||||||||||||||| || || |||||||||||||||   |||||||||| | | ||| ||||||        
T  33808121 gggggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtggtattcaatcaaaattcttttcaatttaaaa 33808022  T
Q  437 nnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtat 535  Q
       |||||||| |||||||| |||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||        |||| |||||||    
T  33808021 aaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtat 33807922  T
Q  536 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  33807921 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 33807842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 347 - 614
Target Start/End: Original strand, 25418260 - 25418527
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    |||||||| | ||||||| |||||||||||| | ||||| || |||||||  | ||||||||||||||||| ||| ||| || |||       |||||||    
T  25418260 tattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaaaactctttccattttaaaaaaagtcttgt 25418359  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
    | ||||||||||||| |||||||||||| ||| |||||||| | |||||||||||||||||| |||| ||        ||| | ||||||||||||||||    
T  25418360 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcatt 25418459  T
Q  547 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt 614  Q
    |||||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  25418460 caaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttt 25418527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 51699798 - 51699524
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | |||| ||  ||||||||||||| ||||| || | |||||| | ||||||||||||||||||||| ||| ||||||           
T  51699798 gggggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaaattttgtggtattcaatcaagactcttttcaatttaaaaaaa 51699699  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||  ||||||||||||| |||||||||||| ||| || ||||| | ||||||||||||||| || |||| ||        ||| |||||||||||    
T  51699698 gtcttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaa 51699600  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||| ||||| |||||||    
T  51699599 aatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaatttta 51699524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 339 - 553
Target Start/End: Original strand, 12103518 - 12103729
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||| |||||          
T  12103518 gggggatgtattggattagaattcta--agattttaaaagactttttaattatgaaatagtcttgttgtattcaatcaatactctttgtaattt-aaaaa 12103614  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||| |||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||       ||||  |||||||||    
T  12103615 agtctcgtggtattcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattca 12103714  T
Q  539 aaatcattcaaattt 553  Q
    |||||||||||||||    
T  12103715 aaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 54625484 - 54625754
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| ||||||||| |||| ||||| || ||||||   | |||| |||||||||||||||| ||| ||||||       |||||    
T  54625484 tgtattggatcatgattctaagagattttagaagatttttttatcatgaaatttttttgtagtattcaatcaagactctttccaatttaaaaaaagtctt 54625583  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||| | || ||||||||| ||| || |||||   ||||||||||||||| || |||| ||       |||| |||||||||||||| |    
T  54625584 gtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatta 54625683  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  54625684 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 54625754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 440 - 615
Target Start/End: Complemental strand, 3999864 - 3999689
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||        ||| |||||||||||    
T  3999864 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaa 3999765  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  3999764 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 3999689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 393 - 591
Target Start/End: Original strand, 44276329 - 44276523
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    |||||||| ||||||||||||| |||||| |||| |||||       ||||||||||||||||| || |||||||||||||||||| |||||||||| ||    
T  44276329 aaaaagtcatgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggta 44276428  T
Q  493 ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    ||||||||||| ||||||||| ||       ||||  |||||||||||||||||||||||    ||||||||||||||||||||||||||  |||||||    
T  44276429 ttcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----aggattgtttaataaattggattttgtgggatttt 44276523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 448 - 615
Target Start/End: Complemental strand, 33996752 - 33996585
Alignment:
Q  448 gtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 547  Q
    |||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||        ||  |||||||||||||||||||    
T  33996752 gtattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattc 33996653  T
Q  548 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||||| ||||| |||||||    
T  33996652 aaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaatttta 33996585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 369 - 615
Target Start/End: Original strand, 52114446 - 52114691
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttg 468  Q
    ||||||||||| ||||| || |||| |||||||||||||||||||||||  || ||| ||||||        ||||||| ||||||| ||||| ||||||    
T  52114446 attttaaaagatttttttatcatgataaagtcttgtggtattcaatcaa--ctattttcaatttaaaaaaaatcttgtgttattcaaccaagattctttg 52114543  T
Q  469 tcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgttta 567  Q
    |||||| ||| |||||||| | |||||||||||||||||| |||| ||        |||| |||||||||||||| |||||||||||| |||||||||||    
T  52114544 tcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcgcaggattgttta 52114643  T
Q  568 ataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||  ||||||||| |||||||||| ||||| ||||  |||||||    
T  52114644 ataaatcagattttgatagattttgtggaattttctagtaaaatttta 52114691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 429
Target Start/End: Complemental strand, 39842748 - 39842659
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 429  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39842748 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaa 39842659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 55235079 - 55235347
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||| ||||||| ||||||| |  ||||||||||||||||||||||||||||| | | ||| ||||||||||||||  ||| ||| ||       |||||    
T  55235079 tgtagtggattaagattctaaggaattttaaaagactttttaattatgaaaaaatatagtgttattcaatcaagaccctttacaacttaaaaaa-gtctt 55235177  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||||| || |||||||| |||| ||||||||||| |||||  ||| ||||||||||| ||| ||||||| ||       ||||  || ||||||||||||    
T  55235178 gtggtctttaatcaagattctt-gtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattcaaaatca 55235275  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatgga-ttttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| || || |||||||    
T  55235276 ttcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaatttta 55235347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 22057655 - 22057924
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    |||||||||| | ||||||| | ||||||||||||||||||  || |||||||||| |||||||||||||||     | ||| ||||||       ||||    
T  22057655 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaatcgt---tctttccaatttaaaaaaagtct 22057751  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagt-cttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    |||| ||||||||||||| |||||||||||| ||| ||   |||| | ||||| ||||||||| || |||| ||        ||| |||||||| |||||    
T  22057752 tgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaat 22057851  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  22057852 cattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 22057924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 339 - 463
Target Start/End: Complemental strand, 10728919 - 10728795
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||          
T  10728919 gggggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaa 10728820  T
Q  439 ngtcttgtggtattcaatcaagact 463  Q
     |||||| |||||||||||||||||    
T  10728819 agtcttgaggtattcaatcaagact 10728795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 451 - 615
Target Start/End: Complemental strand, 53929336 - 53929172
Alignment:
Q  451 ttcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 550  Q
    ||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||||||||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  551 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    | ||||| |||||||||||||||  |||||||||||||||||| ||||||| ||||| |||||||    
T  53929236 tatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaatttta 53929172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 480 - 587
Target Start/End: Complemental strand, 539583 - 539476
Alignment:
Q  480 aagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt 579  Q
    |||||||||| ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  539583 aagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggatt 539484  T
Q  580 ttgatgga 587  Q
    ||||||||    
T  539483 ttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 52810306 - 52810464
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||  ||||          
T  52810306 ggggaatgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattcaatcaagactctttgtcattttaaaaa 52810405  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
     || ||| ||||||||||||||||| ||  |||||| ||| |||||||| | |||||||    
T  52810406 agttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 52810464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 17946217 - 17946374
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||          
T  17946217 gggggatgtattggattaggattctataggattt-aaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattctttgtcattttaaaaa 17946315  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
     |||||| ||||||||||||||||| ||  ||| || ||| |||||| | |||||||||    
T  17946316 agtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaa 17946374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 530 - 612
Target Start/End: Original strand, 5825139 - 5825221
Alignment:
Q  530 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatt 612  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaatt 5825221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 539699 - 539608
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 432  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||| |||||    
T  539699 gggatgtattggattagggttctaagagattttaaaagattttttaattatgaaaaagccttgtggtattcaatcaaaactctttgtaattt 539608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 15494050 - 15493958
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 432  Q
    |||||||||||||||||  |||||| | |||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||||    
T  15494050 ggggatgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatttaatcaagactctttgcaattt 15493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 345 - 419
Target Start/End: Original strand, 38772269 - 38772343
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 419  Q
    |||||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38772269 tgtattagattaggattctgagagattttaaaagactttttatttatgaaaaagtcttgtggtattcaatcaaga 38772343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 339 - 421
Target Start/End: Complemental strand, 12734160 - 12734078
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 421  Q
    ||||| |||||||||| | ||||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  12734160 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 12734078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 498
Target Start/End: Original strand, 44276266 - 44276392
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctt 466  Q
    ||||||||||||||||||||||||||||     | |||||||||||||||| |||||||| |||||       ||| ||||||||||||| |||||||||    
T  44276266 agattttaaaagactttttaattatgaa-----cctgtggtattcaatcaaaactttttgtaatttaaaaaaagtcatgtggtattcaattaagactctt 44276360  T
Q  467 tgtcattttaaataagtcttgagatattcaat 498  Q
    ||| |||| ||| |||||||| | ||||||||    
T  44276361 tgtaatttaaaaaaagtcttgtggtattcaat 44276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 593
Target Start/End: Complemental strand, 39842619 - 39842550
Alignment:
Q  524 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgt 39842550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 591
Target Start/End: Original strand, 27899415 - 27899482
Alignment:
Q  524 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||  |||||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtaggatttt 27899482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 468
Target Start/End: Original strand, 2024120 - 2024222
Alignment:
Q  366 gagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactct 465  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| ||||  ||||        ||||||| |||| ||||||||||||    
T  2024120 gagattttaaaatatttttttattatgaaaaagtcttgtggtattcaatcaagactatttgtcatttaaaaataatcttgtgatatttaatcaagactct 2024219  T
Q  466 ttg 468  Q
    |||    
T  2024220 ttg 2024222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 458 - 553
Target Start/End: Complemental strand, 15493061 - 15492967
Alignment:
Q  458 aagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 553  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||       ||||  ||||||||||||||||||||||||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactt-aaaaatgtctcatggtattcaaaatcattcaaattt 15492967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 10105072 - 10105016
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  10105072 gattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagactttt 10105016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 10216219 - 10216163
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  10216219 gattttaaaagatttttttattataaaaaagtcttgtggtattcaatcaagactttt 10216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 10225848 - 10225792
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  10225848 gattttaaaagacttttttattataaaaaagtcttgtgctattcaatcaagactttt 10225792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 10225726 - 10225671
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  10225726 attttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagactttt 10225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 548 - 606
Target Start/End: Complemental strand, 1440005 - 1439947
Alignment:
Q  548 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagt 606  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagt 1439947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 529 - 591
Target Start/End: Original strand, 52080003 - 52080065
Alignment:
Q  529 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||||||  |||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggatttt 52080065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 524 - 580
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  524 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 580  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 28146317 - 28146261
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| || ||||||||||| || ||||||||||||||||||||    
T  28146317 gattttaaaagacttttttatgatgaaaaagtcatggggtattcaatcaagactttt 28146261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 45215459 - 45215403
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||    
T  45215459 gattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaaaactttt 45215403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 10104950 - 10104895
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  10104950 attttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaaaactttt 10104895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 10216097 - 10216042
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  10216097 attttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaaaactttt 10216042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 345 - 485
Target Start/End: Original strand, 27899278 - 27899418
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||| ||||| |||||||   |||||||||||||||||| |||||||||   | ||||||||||||||  ||| | ||| ||| ||       ||| |    
T  27899278 tgtattagattatgattctaaatgattttaaaagacttttttattatgaaatttttttgtggtattcaattcagattctttccaacttaaaaaaagtcat 27899377  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtct 485  Q
     ||||||||||||||||||||||||||||| ||| ||||||    
T  27899378 atggtattcaatcaagactctttgtcatttaaaaaaagtct 27899418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 505
Target Start/End: Complemental strand, 6131481 - 6131367
Alignment:
Q  390 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgag 489  Q
    |||||||||| ||||||||||||||||||||| ||| |||||        |||||||| |||||||||||||  | ||||||||| ||| |||| ||| |    
T  6131481 atgaaaaagttttgtggtattcaatcaagactctttccaatt-gaaaaaagtcttgtgttattcaatcaagatccattgtcatttaaaaaaagttttgtg 6131383  T
Q  490 atattcaatcaagact 505  Q
     |||||||||||||||    
T  6131382 ttattcaatcaagact 6131367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 401
Target Start/End: Complemental strand, 50901261 - 50901199
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtct 401  Q
    ||||||||||||||||||  ||| || | |||||||||||||||||||||||| |||||||||    
T  50901261 gggggatgtattggattaaaattttaagggattttaaaagactttttaattataaaaaagtct 50901199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 505
Target Start/End: Original strand, 2024152 - 2024217
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagact 505  Q
    |||||||||||||||||||||||| |||||||||| |||  | ||||| |||||| ||||||||||    
T  2024152 gtcttgtggtattcaatcaagactatttgtcatttaaaaataatcttgtgatatttaatcaagact 2024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 39038219 - 39038283
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    ||||||||||||  ||||||||| ||||||||||||||||| | |||||||| |||||||||||||    
T  39038219 tgagatttcttgaaattgtttttcttttaaaagttactatc-tcttcttctcctctctctctctct 39038283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 703
Target Start/End: Complemental strand, 23753424 - 23753360
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||||| ||| | || |||||||    
T  23753424 tgagatttcttgagattgtttttgttttaaaagttactatctctttctcctcctttcactctctc 23753360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 703
Target Start/End: Complemental strand, 39842511 - 39842447
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
    |||||||||||| |||||||||| ||||||||||||| |||| |||||||||   ||||||||||    
T  39842511 tgagatttcttgggattgtttttcttttaaaagttaccatctctttcttctcccttctctctctc 39842447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 46749277 - 46749333
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||| ||||| ||||| |||||||||||||||| | |||||||||||||    
T  46749277 gattttaaaagatttttttattataaaaaagtcttgtggtaatgaatcaagactttt 46749333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 393 - 497
Target Start/End: Complemental strand, 34484254 - 34484150
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    ||||||||||||||||||||||||||||| ||||  ||||       |||||| ||||||||||||||||| ||  |||||| ||| |||| ||| | ||    
T  34484254 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggta 34484155  T
Q  493 ttcaa 497  Q
    |||||    
T  34484154 ttcaa 34484150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 505
Target Start/End: Complemental strand, 6131387 - 6131325
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagact 505  Q
    ||||| |||||||||||||||| ||||||||| ||| |||| ||| | |||||||||||||||    
T  6131387 ttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagact 6131325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 693
Target Start/End: Complemental strand, 31646303 - 31646249
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatc 693  Q
    |||||||||||| ||||||| || ||||||||||||||| || ||||||||||||    
T  31646303 tgagatttcttgagattgttattcttttaaaagttactacctctttcttctcatc 31646249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 505
Target Start/End: Complemental strand, 27240504 - 27240439
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagact 505  Q
    |||||||||||||||||||||||| ||||  | || ||| |||||||| | |||||||||||||||    
T  27240504 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 27240439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 19552206 - 19552150
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||| ||||| ||| |  |||||||||||||||||||||||||| ||||    
T  19552206 gattttaaaagatttttttattttataaaagtcttgtggtattcaatcaagattttt 19552150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 26555840 - 26555896
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  26555840 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 26555896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 30588865 - 30588921
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  30588865 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 30588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 36055065 - 36055009
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  36055065 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 36055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 36785997 - 36786053
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  36785997 gattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 38682452 - 38682508
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||| ||||||||||||||||||||| ||||    
T  38682452 gattttaaaagacttttttgttttaaaaaaatcttgtggtattcaatcaagattttt 38682508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 50900505 - 50900449
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  50900505 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 50900449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 615
Target Start/End: Complemental strand, 6131316 - 6131277
Alignment:
Q  576 gattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  6131316 gattttgatggattttgtgggattttctagtgaaatttta 6131277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 678
Target Start/End: Complemental strand, 10728668 - 10728629
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactat 678  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  10728668 tgagatttcttgagattgtttttcttttaaaagttactat 10728629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 674
Target Start/End: Original strand, 11431715 - 11431750
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagtta 674  Q
    |||||||||||| |||||||||||||||||||||||    
T  11431715 tgagatttcttgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 15492882 - 15492816
Alignment:
Q  641 agatttcttgtgattgtttttattttaaaag-ttactatctttttct--tctcatctctctctctct 704  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||  || | |||||||||||||    
T  15492882 agatttcttgagattgtttttattttaaaagtttactatctatttctcatcccttctctctctctct 15492816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 23536058 - 23536007
Alignment:
Q  371 tttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagact 421  Q
    |||||||||||||||  ||||||||||||| ||| |||||||||||||||||    
T  23536058 tttaaaagactttttttattatgaaaaagtattgcggtattcaatcaagact 23536007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 38629857 - 38629802
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  38629857 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 38629802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 491
Target Start/End: Original strand, 38772322 - 38772373
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagat 491  Q
    |||||||||||||||||||||| ||||||| | || ||| ||||||||||||    
T  38772322 gtcttgtggtattcaatcaagattctttgtaacttaaaaaaagtcttgagat 38772373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 678
Target Start/End: Complemental strand, 50762077 - 50762038
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactat 678  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  50762077 tgagatttcttgagattgtttttcttttaaaagttactat 50762038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 704
Target Start/End: Complemental strand, 51737737 - 51737679
Alignment:
Q  645 ttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||| |||||||||| ||| |||||||| ||||| ||||||||| |||||||||||||    
T  51737737 ttcttgagattgtttttcttt-aaaagttattatctctttcttctcctctctctctctct 51737679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 368 - 410
Target Start/End: Complemental strand, 10067742 - 10067700
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtatt 410  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||    
T  10067742 gattttaaaagactttttcattataaaaaagttttgtggtatt 10067700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 24574976 - 24574926
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 419  Q
    |||||||||||||||||| |||| ||||| ||||| | |||||||||||||    
T  24574976 attttaaaagactttttagttataaaaaaatcttgagatattcaatcaaga 24574926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 44701569 - 44701626
Alignment:
Q  368 gattttaaaagac-tttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||| ||||| || ||||||| |||| ||| ||||||||||||||||||    
T  44701569 gattttaaaagacattttttataatgaaaatgtctagtgatattcaatcaagactttt 44701626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 45927007 - 45926949
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtg----gtattcaatcaagactt 422  Q
    |||||||||||||||||| ||||| ||||||||||||     |||||||||||||||||    
T  45927007 gattttaaaagactttttgattataaaaaagtcttgtacgtagtattcaatcaagactt 45926949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 52024258 - 52024201
Alignment:
Q  368 gattttaaaagactttttaattat-gaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  ||||||||||||||||||||||||||| ||||    
T  52024258 gattttaaaagacttttttgttttaaaaaaagtcttgtggtattcaatcaagattttt 52024201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 95)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 28342228 - 28342596
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||          
T  28342228 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaa 28342327  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||       |||||||||||||||    
T  28342328 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattca 28342427  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  28342428 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 28342527  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342528 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 28342596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 340 - 704
Target Start/End: Complemental strand, 29615082 - 29614715
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  29615082 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 29614983  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||| |||||||    
T  29614982 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaa 29614883  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||         
T  29614882 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 29614783  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      |||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  29614782 gatgagatttcttgagattatttttattttaaaagttactatctttttcttctcatatctctctctct 29614715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 340 - 689
Target Start/End: Original strand, 23101180 - 23101532
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||           
T  23101180 ggggatgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaa 23101279  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       ||||||||||||||||    
T  23101280 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 23101379  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||         
T  23101380 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 23101479  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttct 689  Q
      |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23101480 gatgagatttcttgagattgtttttattttaaaagttactatctttttcttct 23101532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 342 - 704
Target Start/End: Original strand, 39783983 - 39784347
Alignment:
Q  342 ggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 441  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||       ||    
T  39783983 ggatgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagt 39784082  T
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 541  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       ||||||||||||||||||    
T  39784083 cttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 39784182  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnn 638  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||           
T  39784183 tcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 39784282  T
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  39784283 tgagatttcttgagattgtttttattttaaaagttactatctttctc-tctcatctctctctctct 39784347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 341 - 704
Target Start/End: Complemental strand, 9882553 - 9882188
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 440  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |    
T  9882553 gggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaag 9882454  T
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 540  Q
    | |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||||||||||||||||    
T  9882453 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 9882354  T
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnn 637  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||          
T  9882353 atcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaa 9882255  T
Q  638 ntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
     |||||||||||| |||||||||| |||||||||||| ||||| ||||||||| | |||||||||||    
T  9882254 atgagatttcttgagattgtttttcttttaaaagttattatctctttcttctcctttctctctctct 9882188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 18838270 - 18838638
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||          
T  18838270 gggggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaa 18838369  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
      | ||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||  ||       |||||||||||||||    
T  18838370 aatattgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattca 18838469  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  | ||| ||        
T  18838470 aaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaa 18838569  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||| |||||||||||||||||| ||||||||| | |||||||||||    
T  18838570 agatgagatttcttgagattgtttttcttttaaaagttactatctctttcttctcctttctctctctct 18838638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 343 - 615
Target Start/End: Original strand, 33382522 - 33382794
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 442  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||       | |    
T  33382522 gatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaacttaaaaaaagcc 33382621  T
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||  |||||||||||||    
T  33382622 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaat 33382721  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33382722 catttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 33382794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 340 - 704
Target Start/End: Original strand, 7993024 - 7993391
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||           
T  7993024 ggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 7993123  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||| ||       ||||| ||||||||||    
T  7993124 gtctcgtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaa 7993223  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||   ||   |  ||||| ||         
T  7993224 aatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 7993323  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      | |||||||||| |||||||||| |||||||||||||||||| | ||| ||  |||||||||||||    
T  7993324 gataagatttcttgagattgtttttcttttaaaagttactatctctctctactactctctctctctct 7993391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 3022808 - 3023083
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||  || ||           
T  3022808 ggggatgtattgaattaggattctatgggattttaaaagattttttaattatgaaaaagttttatggtatttaatcaagactttttaaaacttaaaaaaa 3022907  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||| ||       ||||||||||||||||    
T  3022908 gtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 3023007  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3023008 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 3023083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 343 - 615
Target Start/End: Original strand, 12963587 - 12963858
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 442  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||| ||       |||    
T  12963587 gatgtattggattaggattcta-gagattttaaaagactttttaattacgaaaaagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtc 12963685  T
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||       |||| ||||||| ||||||    
T  12963686 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaat 12963785  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  12963786 cattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaatttta 12963858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 349 - 704
Target Start/End: Complemental strand, 28035114 - 28034756
Alignment:
Q  349 ttggattaggattctatgagattttaaaagacttttt-aattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtg 447  Q
    ||||||||||||||||||  ||||||||||||||||| |||||| ||||||| |||||||||||||| |||| ||||||||| ||       ||||||||    
T  28035114 ttggattaggattctatggaattttaaaagacttttttaattattaaaaagttttgtggtattcaattaagattttttgcaacttaaaaaa-gtcttgtg 28035016  T
Q  448 gtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 547  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||| ||||    
T  28035015 gtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattc 28034916  T
Q  548 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt---attgagatttcttttatnnnnnnntgagat 644  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |   | |  ||||| ||       ||||||    
T  28034915 aaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagat 28034816  T
Q  645 ttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||| |||||||||| ||||| |||||||||||| |||||||||  ||||||||||||    
T  28034815 ttcttgagattgtttttcttttacaagttactatctctttcttctctcctctctctctct 28034756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 339 - 593
Target Start/End: Original strand, 37327808 - 37328062
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||| |||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  37327808 gggggatgtataggattaagattcaatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 37327907  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||       |||||||||||||||    
T  37327908 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattca 37328007  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  37328008 aaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 32883662 - 32883939
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatc-aagactttttgcaatttnnnnn 437  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||         
T  32883662 gggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattcaatctaagactttttgcaacttaaaaa 32883761  T
Q  438 nngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
      ||||| |||||||||||||||||| |||||||||||||| |||||||||  |||||||| |||||||||||||| ||       ||||||||||||||    
T  32883762 aagtcttatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattc 32883861  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  32883862 aaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaatttta 32883939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 341 - 593
Target Start/End: Original strand, 39027980 - 39028232
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 440  Q
    ||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||            
T  39027980 gggatgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaa 39028079  T
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 540  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||       |||||||| ||||||||    
T  39028080 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaa 39028179  T
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  39028180 atcgttcaaattacgaaagattgtttaataaattggattttgatggattttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 339 - 595
Target Start/End: Complemental strand, 46405750 - 46405494
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||          
T  46405750 gggggatatattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaaaa 46405651  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
      ||||| |||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||       |||||||||||||||    
T  46405650 aatcttgcggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 46405551  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg 595  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  46405550 aaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 339 - 582
Target Start/End: Complemental strand, 17001342 - 17001099
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  17001342 gggggatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 17001243  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||| |||||||||||||| ||        | | ||||||||||    
T  17001242 agtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattca 17001143  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17001142 aaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 362 - 593
Target Start/End: Complemental strand, 40461003 - 40460772
Alignment:
Q  362 ctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaaga 461  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||       |||||||| |||||||| ||||    
T  40461003 ctatgagattttaaaagactttttaattatgaaaaagttttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaaga 40460904  T
Q  462 ctctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggat 561  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| |||    
T  40460903 ctctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgat 40460804  T
Q  562 tgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||||||||||||||||||||    
T  40460803 tgtttaataaattggattttgatggattttgt 40460772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 350 - 591
Target Start/End: Original strand, 19251431 - 19251672
Alignment:
Q  350 tggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggt 449  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||| ||       ||||||||||    
T  19251431 tggattaggattctaagagattttaaaagactttttaattacgaaaaagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggt 19251530  T
Q  450 attcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaa 549  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||| ||       |||| |||||||||||||||||||||    
T  19251531 attcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaa 19251630  T
Q  550 atttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19251631 atttcgaaggattgtttaataaattggattttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 343 - 703
Target Start/End: Original strand, 41827199 - 41827552
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 442  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||    
T  41827199 gatgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaacttaaaaaaagtc 41827298  T
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||||||||||||||||||||| |||||||||||||| || ||||||| | ||||||||||||||||||| | ||       ||||||||||||||||||     
T  41827299 ttgtggtattcaatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaa- 41827397  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnnt 639  Q
             || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   ||   || ||||| ||       |    
T  41827398 ---------tttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatat 41827488  T
Q  640 gagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||| | ||||||||||    
T  41827489 gagatttcttgagattgtttttcttttaaaagttactatctctttcttctcctttctctctctc 41827552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 352 - 615
Target Start/End: Original strand, 12740267 - 12740529
Alignment:
Q  352 gattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtat 451  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||| |||||||||||||| ||       ||||||||||||    
T  12740267 gattaggattctatgagattttaaaagactttttaattatgaaaaaatctggtgatatttaattaagactttttgcaacttaaaaaaagtcttgtggtat 12740366  T
Q  452 tcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 551  Q
    |||||||||| ||||||||||||| || |||||||||| |||| |||||||| ||||||||||||       |||| |||||||||||||||||||||||    
T  12740367 tcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaat 12740466  T
Q  552 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||| ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  12740467 ttcaaaggattgtttaataaa-tggattttgatagattttgtgggattttatagtgtaatttta 12740529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 10068347 - 10068624
Alignment:
Q  339 gggggatgtattggattaggattct-atgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnn 437  Q
    ||||||||||||||| || |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||         
T  10068347 gggggatgtattggaatatgattctgatg-gattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaaactctttgcaatttaaaaa 10068445  T
Q  438 nngtcttgtggtattcaatcaagactctttgtcattttaaataagtctt-gagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtatt 536  Q
      ||||||||||||| ||||||||||||||| ||||||||| ||||||| ||| ||||||||||||| ||||||||| ||       |||||||||||||    
T  10068446 aagtcttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtatt 10068545  T
Q  537 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||    
T  10068546 caaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaatttta 10068624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 343 - 593
Target Start/End: Complemental strand, 44122216 - 44121965
Alignment:
Q  343 gatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa-gactttttgcaatttnnnnnnngt 441  Q
    ||||||||||||||| |||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||| ||             
T  44122216 gatgtattggattagaattctataggattttaaaagattttttaattatgaaaaagtattgtggtattcaatcaaagattttttgcaacttaaaaaaaaa 44122117  T
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 541  Q
     |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||        |||||||||||||||||    
T  44122116 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaa 44122017  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44122016 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 44121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 340 - 593
Target Start/End: Complemental strand, 33892569 - 33892315
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||           
T  33892569 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaaattttttgcaatttaaaaaaa 33892470  T
Q  440 g--tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
       ||||  ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||||    
T  33892469 aattctta-ggtattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattc 33892371  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||    
T  33892370 aaaatcattcaaatttcgaatgattgttaaataaattggatttttatgaattttgt 33892315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 347 - 615
Target Start/End: Complemental strand, 44257077 - 44256809
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    |||||||||||||||| |||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||  |       |||||||    
T  44257077 tattggattaggattcgatgagattttaaaaaagtttttaattatgaaaaagttctgtggtattcaatcaagactttttgcaaccttaaaaaagtcttgt 44256978  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
     ||||| |||||||||| |||||||||||||| || |||| || ||||||||||||||||||||||| ||       || | ||||||||||||||||||    
T  44256977 agtatttaatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcatt 44256878  T
Q  547 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||||    
T  44256877 caaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaatttta 44256809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 44343714 - 44343439
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||           
T  44343714 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 44343615  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| ||||||||||||||||| || |||| ||       || | |||||||| ||    
T  44343614 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaa 44343515  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  44343514 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 44343439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 30440684 - 30440960
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||||||          
T  30440684 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaa 30440783  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| ||||||||||||| |||||||||||| ||| || ||||| | ||||||||||||||| || |||| ||       |||| ||||||||||    
T  30440784 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 30440883  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  30440884 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 30440960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 369 - 615
Target Start/End: Complemental strand, 43581379 - 43581133
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttg 468  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| ||||||    
T  43581379 attttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttg 43581280  T
Q  469 tcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 568  Q
    |||||| ||| ||||||||   ||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||    
T  43581279 tcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaa 43581180  T
Q  569 taaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||  |||||||||||||||||||||||||| ||||| |||||||    
T  43581179 taaatcagattttgatggattttgtgggattttctagtgaaatttta 43581133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 339 - 586
Target Start/End: Complemental strand, 3797376 - 3797129
Alignment:
Q  339 gggggatgtattggattaggattcta-tgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnn 437  Q
    |||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||         
T  3797376 gggggatgtattagattatgattctaatga-attttaaaagactttttaattatgaaatagttttgaggtattcaatcaagactctttgcaatttaaaaa 3797278  T
Q  438 nngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
      ||| | || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||||    
T  3797277 aagtcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 3797178  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgg 586  Q
    || |||||| |||||| |||||||||||||||||||| |||||||||||    
T  3797177 aagatcattaaaattttgaaggattgtttaataaattagattttgatgg 3797129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 440 - 704
Target Start/End: Original strand, 509638 - 509895
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||       ||||||||||||||||    
T  509638 gtcttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 509737  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgagatt---tcttttatnnnnn 636  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||          ||||||||  ||||||   |||     ||||| ||         
T  509738 aatcattcaaatttcgaacgattgtttaataaattggattttgatggatt----------ttgtagtgggattttaacaagaaaaagtctttcatgaaaa 509827  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  509828 gatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 509895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 451 - 690
Target Start/End: Original strand, 8675326 - 8675567
Alignment:
Q  451 ttcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 550  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||||||||||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  551 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntgagatttc 647  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||||||       |||||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  648 ttgtgattgtttttattttaaaagttactatctttttcttctc 690  Q
    ||| |||||||||| |||| ||||||||||||| |||||||||    
T  8675526 ttgagattgtttttctttt-aaagttactatctatttcttctc 8675567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 20275576 - 20275306
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||||||||| || ||||| |||||||||||||||||||||||| | ||| ||||||       |||||    
T  20275576 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtctt 20275477  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    | | ||||||||||||| || ||||||||| ||| |||||||  | ||||||||||||||| || |||| ||       ||||| |||||||||||||||    
T  20275476 gggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatca 20275377  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  20275376 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaatttta 20275306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 47914160 - 47914430
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    ||||||| || | ||||||| | ||||||||||||||| || || |||||||||||||||||||||||||||| ||| ||| ||||||       |||||    
T  47914160 tgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtctt 47914259  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| ||||| || | ||||||||||||||| || |||| ||       |||| ||| ||||||||||||    
T  47914260 gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatca 47914359  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  47914360 ttcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 47914430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 973077 - 973348
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    |||||||||| | ||||||| | |||||||||||| |||||  || |||||||||||||||||||||||||||||||| ||| ||||||       || |    
T  973077 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttt 973176  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    |||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||        | | |||||||||||||||    
T  973177 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatc 973276  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  973277 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 973348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 368 - 615
Target Start/End: Complemental strand, 18915025 - 18914778
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactcttt 467  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||| | |||||    
T  18915025 gattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaaaattcttt 18914926  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttta 567  Q
    ||| ||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| |||| |||||||    
T  18914925 gtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgttta 18914826  T
Q  568 ataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  18914825 ataaatcagattttgatggattttgtgggattttctagtgaaatttta 18914778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 339 - 505
Target Start/End: Complemental strand, 48117912 - 48117746
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  48117912 gggggatgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 48117813  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagact 505  Q
     ||||||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||||||    
T  48117812 agtcttgtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 12893296 - 12893572
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | ||||||| |  ||||||||||| |||||  | |||||||||||||||||||||||||||||||| ||| ||||||          
T  12893296 ggggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 12893395  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| ||||||||||||| |||||||||||| ||| |||||||| | |||| |||||||||| || |||| ||       ||||  |||||||||    
T  12893396 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattca 12893495  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||| ||||| |||||||    
T  12893496 aaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaatttta 12893572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 40996968 - 40996692
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||| |||||||||| | ||||||| | |||||||||| | |||||  || |||||| ||||||||||||||||||||||||| ||| ||||||          
T  40996968 gggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaaaaa 40996869  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||| ||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||  ||       |||| ||||||||||    
T  40996868 agtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattca 40996769  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||| |||||||    
T  40996768 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaatttta 40996692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 7719574 - 7719303
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa-gactttttgcaatttnnnnnnngtct 443  Q
    |||||||||| | |||| ||  ||||||||||||||||||| || |||||||| ||||||||||||||||||| |||| ||| ||||||       ||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaattcttgtggtattcaatcaaagactctttccaatttaaaaaaagtct 7719475  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    |||| ||||||||||| | | |||||||||| ||| |||||||| | ||||||||||||||| || |||| ||        ||| |||||||||||||||    
T  7719474 tgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatc 7719375  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  7719374 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 7719303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 345 - 615
Target Start/End: Original strand, 47879062 - 47879332
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    ||||||| || | ||||||| | ||||||||||||||| || || |||||||||||||||||||||||||||| ||| ||| ||||||       |||||    
T  47879062 tgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtctt 47879161  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| ||||| || | ||||||||||||||| || |||| ||       |||| ||| ||||||||||||    
T  47879162 gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatca 47879261  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||  ||||||||||||||||||  |||||||||||||||||||| ||||| ||||| |||||||    
T  47879262 ttcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaatttta 47879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 345 - 591
Target Start/End: Original strand, 31638769 - 31639015
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    ||||||| || | ||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||| ||||||       |||||    
T  31638769 tgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 31638868  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||| | |||||||||||| ||| || |  || | ||||| ||||||||| || |||| ||       |||| ||||||||||||||||    
T  31638869 gtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 31638968  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  31638969 ttcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 393 - 615
Target Start/End: Original strand, 34695215 - 34695437
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    ||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| || ||||||||| ||| |||| ||| | ||    
T  34695215 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggta 34695314  T
Q  493 ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    ||||||||||||| || |||| ||       |||  ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  34695315 ttcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttg 34695414  T
Q  593 tgggattttgtagtgtaatttta 615  Q
    ||||||||| ||||| |||||||    
T  34695415 tgggattttctagtgaaatttta 34695437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 340 - 601
Target Start/End: Original strand, 34008904 - 34009163
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||| ||||| || ||||||||||||   ||||||||||||||||| ||| ||||||           
T  34008904 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtct---ggtattcaatcaagactcttttcaatttaaaaaaa 34009000  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtctt-gtggtattca 538  Q
    |||||||| ||||||||||||| | |||||||||| ||| |||||||| | ||||||||||| ||| || |||| ||       ||| | ||||||||||    
T  34009001 gtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattca 34009100  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 601  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  34009101 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaatttt 34009163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 43187662 - 43187400
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||          
T  43187662 gggggatgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactctttgtaatttaaaaaa 43187563  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||| ||||||||||| || |||||||||||||||||| ||||              |||| |  |||||||| ||       ||||  |||||||||    
T  43187562 agtcttatggtattcaattaaaactctttgtcattttaaaaaagt--------------tcaaaaaatttcatcacttaaaaaaagtctcatggtattca 43187477  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||    
T  43187476 aaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaatttta 43187400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 443 - 593
Target Start/End: Original strand, 29585500 - 29585649
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||| |||| ||       ||||| |||||||||||||    
T  29585500 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaat 29585598  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  29585599 cattcaaattttgaaggattgtttaataatttggattttgatggattttgt 29585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 339 - 429
Target Start/End: Original strand, 21067763 - 21067853
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 429  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21067763 gggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 21067853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 340 - 497
Target Start/End: Original strand, 509580 - 509737
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||           
T  509580 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactatttgtcattttaaaaaa 509679  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
    |||||| ||||||||||||||||| ||  |||||| ||| |||||||| | |||||||    
T  509680 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 509737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 32143233 - 32142960
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    |||||||||| | ||||||| | ||||||||||||||||||  || |||||||||||||||| ||||||||||||||| |||  |||||       ||||    
T  32143233 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttctaatttaaaaaaagtct 32143134  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnn--gtcttgtggtattcaaaa 541  Q
    |||| |||||||| ||   | |||||||||| ||| |||||||  | |||| |||||||||| || |||| ||         |||  |||||||||||||    
T  32143133 tgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtattcaaaa 32143034  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  32143033 tcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 32142960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 440 - 582
Target Start/End: Original strand, 47066685 - 47066828
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattca 538  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||| |  |||||||| ||        |||||||||||||||    
T  47066685 gtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattca 47066784  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  47066785 aaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 345 - 591
Target Start/End: Original strand, 727406 - 727653
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | |||||||   ||||||||| |||||||| || |||||||||||||| ||||||||||||||||| ||| ||||||       |||||    
T  727406 tgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtctt 727505  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtattcaaaatc 543  Q
    ||| ||||||||||| | |||||||||||| ||| |||||||| ||||||||||||| ||| || |||| ||         ||| || ||||||||||||    
T  727506 gtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaatc 727605  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    ||||||||||| ||||||||||||||||||  |||||||  |||||||    
T  727606 attcaaatttcaaaggattgtttaataaatcagattttgtgggatttt 727653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 441 - 615
Target Start/End: Complemental strand, 10676637 - 10676463
Alignment:
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 540  Q
    |||||||||||| |||||||||||||||  |||| ||| | |||||| | ||||||||||||||||||||||| ||       ||||  | |||||||||    
T  10676637 tcttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaa 10676538  T
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| | ||| |||||||    
T  10676537 atcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 339 - 426
Target Start/End: Original strand, 29893004 - 29893091
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29893004 gggggatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttg 29893091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 340 - 503
Target Start/End: Original strand, 34695120 - 34695283
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| ||||||| || | ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||           
T  34695120 gggggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 34695219  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaaga 503  Q
    ||||||||||||||||||||||||||||   |||| ||| |||||||| | |||||||||||||    
T  34695220 gtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 34695283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 341 - 425
Target Start/End: Complemental strand, 37973091 - 37973007
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagacttttt 425  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  37973091 gggatgtattggattaggattctatgagattttaaaatactttttaattatgaaagagtcttgtggtattcaatcaagacttttt 37973007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 471 - 615
Target Start/End: Complemental strand, 7718549 - 7718405
Alignment:
Q  471 attttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 570  Q
    |||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  571 aattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||  |||||||||||||||||||||||||| ||||| |||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaatttta 7718405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 340 - 591
Target Start/End: Original strand, 9179765 - 9180013
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| ||||||||||||| ||||||  ||||||||||||||||||| || |||||||||||||||| ||||| ||   |||| ||||||| ||           
T  9179765 gggggtgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtgatattcgat---gactctttgcaacttaaacaaa 9179861  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
       ||||  ||||||||||||| |||||||||||| ||| |||| |||   ||||||||||||||| ||||||| ||       |||||||||||| |||    
T  9179862 aatttgtaatattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaa 9179961  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    ||||| | ||||| |||||||||||||||||||||||||||||  |||||||    
T  9179962 aatcacttaaattccgaaggattgtttaataaattggattttgtgggatttt 9180013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 463
Target Start/End: Complemental strand, 10676697 - 10676573
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||| || ||||||| ||||| | |||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||          
T  10676697 gggggatgtgttagattaggtttctaagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagactctttgcaatttaaaaaa 10676598  T
Q  439 ngtcttgtggtattcaatcaagact 463  Q
     ||||||||||||||||||||||||    
T  10676597 ggtcttgtggtattcaatcaagact 10676573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 529 - 615
Target Start/End: Original strand, 43679492 - 43679578
Alignment:
Q  529 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 43679578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 441 - 601
Target Start/End: Original strand, 25805675 - 25805835
Alignment:
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 540  Q
    |||||||| |||||||||||| ||||||| |||| ||| || ||| | | ||||||||||| | ||||||||| ||          ||||||||||||||    
T  25805675 tcttgtggcattcaatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaa 25805774  T
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 601  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||    
T  25805775 atcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggatttt 25805835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 440 - 615
Target Start/End: Complemental strand, 39219595 - 39219420
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataa-gtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
    ||||||||||||||||||||||||||||   |||| ||| || |||||| | ||||||||||||||| || |||| ||       ||||  |||||||||    
T  39219595 gtcttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattca 39219496  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||| || | ||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  39219495 aaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 39219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 358 - 601
Target Start/End: Original strand, 7113363 - 7113602
Alignment:
Q  358 gattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaat 456  Q
    ||||||| | ||||||||||||||||||  || |||| ||||| || |||||||||||||||||| ||| ||||||       |||||||| ||||||||    
T  7113363 gattctaagggattttaaaagactttttttatcatgacaaagtatt-tggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaat 7113461  T
Q  457 caagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcga 556  Q
     |||| | ||| |||||| ||| |||| ||| | ||||||||    |||||| |||| ||       |||  |||||||||||||| ||||||||||||     
T  7113462 taagattttttatcatttaaaaaaagttttgtggtattcaat----acttttaatcacttaaaaaaagtccagtggtattcaaaataattcaaatttcgc 7113557  T
Q  557 aggattgtttaataaattggattttgatggattttgtgggatttt 601  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||    
T  7113558 aggattgtttaataaatcagattttgatagattttgtgggatttt 7113602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 440 - 554
Target Start/End: Original strand, 29893063 - 29893177
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||||| ||       ||||||| ||||| ||    
T  29893063 gtcttgtggtattcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaa 29893162  T
Q  540 aatcattcaaatttc 554  Q
    ||| |||||||||||    
T  29893163 aataattcaaatttc 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 544 - 615
Target Start/End: Complemental strand, 37972981 - 37972910
Alignment:
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaatttta 37972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 344 - 426
Target Start/End: Original strand, 47066630 - 47066713
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatg-aaaaagtcttgtggtattcaatcaagactttttg 426  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  47066630 atgtattggattaggattctatgggatttaaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaaaactctttg 47066713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 443 - 582
Target Start/End: Complemental strand, 44623491 - 44623352
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||| | |||| |||||||||| ||||||| ||       |||| ||| ||||||||||    
T  44623491 ttgtgatattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaat 44623392  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    |||||| ||||| || || |||||||||||||| ||||||    
T  44623391 cattcatatttctaaagactgtttaataaattgaattttg 44623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 442 - 601
Target Start/End: Complemental strand, 1470448 - 1470291
Alignment:
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 541  Q
    |||||| |||||||| |||||| |||||||||| ||| |||||||| ||||||||||  | ||||||||||||||       || |||||||||||||||    
T  1470448 cttgtgctattcaattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcatttaaaaaa-gtattgtggtattcaaaa 1470350  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 601  Q
    || |||||||||  ||| |||||||||| |||| ||||||||| | ||||||||||||||    
T  1470349 tcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggatttt 1470291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 340 - 505
Target Start/End: Original strand, 8078284 - 8078450
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || || ||||||||||||||||||||||||||||| ||| ||||||           
T  8078284 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaa 8078383  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaata-agtcttgagatattcaatcaagact 505  Q
       ||||| ||||||||||||| |||||||||||| ||| | | ||||| | |||||||||||||||    
T  8078384 aatttgtgttattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagact 8078450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 340 - 419
Target Start/End: Original strand, 29585439 - 29585518
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 419  Q
    |||||| ||||| |||| ||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  29585439 ggggatttattgaattatgattctacgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaaga 29585518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 527 - 588
Target Start/End: Original strand, 447852 - 447913
Alignment:
Q  527 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 588  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 369 - 466
Target Start/End: Complemental strand, 39219624 - 39219526
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt-nnnnnnngtcttgtggtattcaatcaagactctt 466  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||        |||||||| ||||||||||||||||||    
T  39219624 attttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactctt 39219526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 43679359 - 43679451
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 432  Q
    |||||||||||||| | ||||||| | |||||||||||| |||||  || |||||||||||||||||||||||||||||||| ||| ||||||    
T  43679359 gggatgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 43679451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 3634239 - 3634295
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  3634239 gattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagactttt 3634295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 640 - 704
Target Start/End: Original strand, 39028272 - 39028336
Alignment:
Q  640 gagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||| | |||||||||||    
T  39028272 gagatttcttgagattgtttttcttttaaaagttactatctctttcttctcctttctctctctct 39028336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 582
Target Start/End: Original strand, 19810874 - 19810923
Alignment:
Q  533 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttg 19810923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 40460733 - 40460668
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||| ||||  |||||||||||||    
T  40460733 tgagatttcttgagattgtttttcttttaaaagttactatctctttgttcttctctctctctctct 40460668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 700
Target Start/End: Complemental strand, 46405457 - 46405396
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctct 700  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||| ||||| |||||||||    
T  46405457 tgagatttcttgagattgtttttcttttaaaagttactatctcttttttctcctctctctct 46405396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 34115531 - 34115475
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||    
T  34115531 gattttaaaagactttttaatgataaaaaaatcttgtagtattcaatcaagactttt 34115475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 639 - 703
Target Start/End: Complemental strand, 44121926 - 44121862
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
    |||||||| ||| |||||||||| |||||||||||||||||| ||||||||| | ||||||||||    
T  44121926 tgagattttttgagattgtttttcttttaaaagttactatctctttcttctcttttctctctctc 44121862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 21066809 - 21066864
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||||  || ||||||| ||||||||||||||||||||||||    
T  21066809 attttaaaagactttttaaaaataaaaaagttttgtggtattcaatcaagactttt 21066864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 48399730 - 48399805
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagac 420  Q
    ||||||| |||  |||| |||||||||||||||||||||||||  || ||||| |||||||||| |||||||||||    
T  48399730 tgtattgaattgtgattttatgagattttaaaagactttttaaaaataaaaaaatcttgtggtaatcaatcaagac 48399805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 424
Target Start/End: Complemental strand, 9599145 - 9599067
Alignment:
Q  347 tattggattaggattctatgagattttaaaagacttttt-aattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||  |||| || |||||||||||| ||||||| |||||| |||||||||||| |||||||||||||| ||||    
T  9599145 tattggattgagattttaagagattttaaaaaacttttttaattataaaaaagtcttgtagtattcaatcaagaatttt 9599067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 424
Target Start/End: Complemental strand, 9826716 - 9826638
Alignment:
Q  347 tattggattaggattctatgagattttaaaagacttttt-aattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||  |||| || |||||||||||| ||||||| |||||| |||||||||||| |||||||||||||| ||||    
T  9826716 tattggattgagattttaagagattttaaaaaacttttttaattataaaaaagtcttgtagtattcaatcaagaatttt 9826638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 697
Target Start/End: Original strand, 29893173 - 29893227
Alignment:
Q  643 atttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctc 697  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||| ||||||    
T  29893173 atttcttgagattgtttttcttttaaaagttactatctctttcttctcctctctc 29893227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 32883951 - 32884016
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||| ||| |||||||||| |||||||||||||||| | ||||||||| | |||||||||||    
T  32883951 tgagatttattgagattgtttttcttttaaaagttactatttgtttcttctcctttctctctctct 32884016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 33892263 - 33892198
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||| ||||| |||||||||||||||||| ||||||||| ||| | |||||||    
T  33892263 tgagatttcttgagattatttttcttttaaaagttactatctctttcttctcctctttttctctct 33892198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 505
Target Start/End: Original strand, 34695178 - 34695243
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagact 505  Q
    ||||||||||||||||||||||||||||   |||| ||| |||||||| | |||||||||||||||    
T  34695178 gtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 34695243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 42678280 - 42678196
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||| || | ||||  | ||||||||||||||||||||||| || ||||| ||| ||| |||||||| |||||||||    
T  42678280 ggggatgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatctggtgatattcaattaagactttt 42678196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 639 - 690
Target Start/End: Original strand, 3023110 - 3023161
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctc 690  Q
    |||||||||||| |||||||||| |||||||||||| ||||| |||||||||    
T  3023110 tgagatttcttgagattgtttttcttttaaaagttagtatctctttcttctc 3023161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 37328103 - 37328166
Alignment:
Q  641 agatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||| ||| |||||||||| ||||||||||||||||||  |||||||| | |||||||||||    
T  37328103 agattttttgagattgtttttcttttaaaagttactatctccttcttctcctttctctctctct 37328166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 27418700 - 27418644
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  27418700 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 27418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 639 - 699
Target Start/End: Complemental strand, 37972883 - 37972823
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctc 699  Q
    ||||| |||||| |||||||||| |||||||||||| ||||| ||||||||| | ||||||    
T  37972883 tgagacttcttgagattgtttttcttttaaaagttattatctctttcttctcctttctctc 37972823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 40097120 - 40097176
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  40097120 gattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 424
Target Start/End: Original strand, 41060007 - 41060067
Alignment:
Q  364 atgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||  |||||||  || ||||||| ||||||||||||||||||| ||||    
T  41060007 atgagattttaaaagcgtttttaaaaataaaaaagttttgtggtattcaatcaagattttt 41060067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 46037408 - 46037352
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| || || ||||||| | ||| ||||||||||||||||||    
T  46037408 gattttaaaagacttttttataattaaaaagtttagtgatattcaatcaagactttt 46037352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 607
Target Start/End: Original strand, 10617024 - 10617067
Alignment:
Q  564 tttaataaattggattttgatggattttgtgggattttgtagtg 607  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtg 10617067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 35090165 - 35090115
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 417  Q
    |||||||||||||||||||  || |  ||||||||||||||||||||||||    
T  35090165 agattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaa 35090115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 31895582 - 31895950
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  31895582 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 31895681  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||       |||||||||||||||    
T  31895682 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 31895781  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   ||   |  ||||| ||        
T  31895782 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaa 31895881  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31895882 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 31895950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 34773296 - 34773571
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  34773296 ggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 34773395  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||        |||||||||||||||    
T  34773396 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaa 34773495  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34773496 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaatttta 34773571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 14262752 - 14262476
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||          
T  14262752 gggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaa 14262653  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||       |||||||||||||||    
T  14262652 agtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattca 14262553  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14262552 aaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 14262476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 6197797 - 6197521
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | ||||||| | |||||||||| ||||||| || ||||||||||| |||||||||||||||||||| ||| ||||||          
T  6197797 ggggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaa 6197698  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||    
T  6197697 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 6197598  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  6197597 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 6197521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 2301056 - 2300781
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||           
T  2301056 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 2300957  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       ||||  ||||||| ||    
T  2300956 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaa 2300857  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  2300856 aatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 2300781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 352 - 615
Target Start/End: Original strand, 7051744 - 7052007
Alignment:
Q  352 gattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtat 451  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||||||| ||       ||||||||||||    
T  7051744 gattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaaaaaagtcttgtggtat 7051843  T
Q  452 tcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 551  Q
     | ||||||| |||||||||||| ||| |||||||| | ||| ||||||||||| ||||||| ||       ||| |||| |||||||||||||||||||    
T  7051844 acgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaat 7051943  T
Q  552 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||||||    
T  7051944 ttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaatttta 7052007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 440 - 615
Target Start/End: Complemental strand, 34759269 - 34759093
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataa-gtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||||| ||       |||||||||||||||    
T  34759269 gtcttgtggtattcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 34759170  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34759169 aaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 34759093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 345 - 614
Target Start/End: Original strand, 1391516 - 1391785
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | |||||||   ||||||||| |||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  1391516 tgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 1391615  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| || ||||||||| ||  |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||||||    
T  1391616 gtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 1391715  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt 614  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  1391716 ttcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttt 1391785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 332 - 615
Target Start/End: Original strand, 29076477 - 29076761
Alignment:
Q  332 tcctaaggggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaat 430  Q
    |||||||||||| |||||||||| | ||||||| ||||||||||||||||||||  || |||||||||||||||| ||||||||||||||| ||| ||||    
T  29076477 tcctaagggggg-tgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaat 29076575  T
Q  431 ttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca-tttnnnnnnngtcttg 529  Q
    ||       |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||| ||| | || |||| ||        |||| |    
T  29076576 ttaaataaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctag 29076675  T
Q  530 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    | ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||| ||||| |||||||    
T  29076676 tagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaatttta 29076761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 332 - 615
Target Start/End: Original strand, 29111450 - 29111735
Alignment:
Q  332 tcctaaggggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaat 430  Q
    |||||||||||| |||||||||| | ||||||| ||||||||||||||||||||  || |||||||||||||||| ||||||||||||||| ||| ||||    
T  29111450 tcctaagggggg-tgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaat 29111548  T
Q  431 ttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcattt--nnnnnnngtctt 528  Q
    ||       |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||| ||| | || |||| ||         ||||     
T  29111549 ttaaataaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtcta 29111648  T
Q  529 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    || ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||| ||||| |||||||    
T  29111649 gtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaatttta 29111735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 440 - 593
Target Start/End: Complemental strand, 30385275 - 30385122
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| | ||||||||| ||       ||||||||||||||||    
T  30385275 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaa 30385176  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  30385175 aatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgt 30385122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 446 - 704
Target Start/End: Original strand, 7497069 - 7497329
Alignment:
Q  446 tggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 545  Q
    ||||||||||||||||||  |||  | || ||| |||||||| | ||||||||||||| ||||||||| ||       ||||||||||||||||||||||    
T  7497069 tggtattcaatcaagacttgttgcaacttaaaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 7497168  T
Q  546 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntgag 642  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||   |  ||||| ||       ||||    
T  7497169 tcaaatttcgaaggagtgtttaataaattggattttgatggattttgt-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 7497267  T
Q  643 atttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||| |||| ||||| |||||||||||||||||| ||| ||||| | |||||||||||    
T  7497268 atttcttgagattatttttcttttaaaagttactatctctttattctcctttctctctctct 7497329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 369 - 615
Target Start/End: Original strand, 28002581 - 28002827
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttg 468  Q
    ||||||||||||||||| || |||||||| |||||| |||||||||||||||| ||| ||||||       |||||||  ||||||||||||| | ||||    
T  28002581 attttaaaagacttttttataatgaaaaaatcttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttttg 28002680  T
Q  469 tcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 568  Q
    |||||| ||| |||||||  | ||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| ||||||||||||||    
T  28002681 tcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaa 28002780  T
Q  569 taaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||  |||||||||||||||||||  ||||| ||||| |||||||    
T  28002781 taaatcagattttgatggattttgtgaaattttctagtgaaatttta 28002827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 7497005 - 7497126
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||| ||           
T  7497005 ggggatgtattggattagaattctatgagattttaaaagattttttaattatgaaaaagtattctggtattcaatcaagacttgttgcaacttaaaaaaa 7497104  T
Q  440 gtcttgtggtattcaatcaaga 461  Q
    ||||||||||||||||||||||    
T  7497105 gtcttgtggtattcaatcaaga 7497126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 527 - 704
Target Start/End: Original strand, 31067567 - 31067738
Alignment:
Q  527 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---att 623  Q
    |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||   ||   |      
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaag 31067656  T
Q  624 tcttttatnnnnnnntgagatttcttgtgattgtttttattttaaaagttactatctttttctt-ctcatctctctctctct 704  Q
    ||||| ||       |||||||||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  31067657 tctttcataaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttccccctctctctctctct 31067738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 544 - 704
Target Start/End: Complemental strand, 4200541 - 4200388
Alignment:
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgagatt---tcttttatnnnnnnntg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||   |||     ||||| ||       ||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  641 agatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200451 agatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 4200388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 441 - 592
Target Start/End: Original strand, 3848200 - 3848348
Alignment:
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 540  Q
    ||||||||||||||||||| ||| |||||||||| ||| |||| ||| | || |||||||||||||  ||||| ||       || ||||||||||||||    
T  3848200 tcttgtggtattcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagactt--catcacttaaaaaaagttttgtggtattcaaa 3848297  T
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    |||||| |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  3848298 atcatttaaattttgaatgattgtttaataaattgaattttg-tggattttg 3848348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 339 - 426
Target Start/End: Complemental strand, 30385336 - 30385247
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagacttttt--aattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  || |   ||||||||||||||||||||||||||||| ||||    
T  30385336 gggggatgtattggattaggattctatgagattttaaaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttg 30385247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 34759329 - 34759241
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagacttttt--aattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  || |   ||||||||||||||||||||||||||||| ||||    
T  34759329 gggggtgtattggattaggattctatgagattttaaaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttg 34759241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 31609750 - 31609694
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  31609750 gattttaaaagactttttaattataaaaaaatcttgtggtattcaatcaagactttt 31609694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 34773607 - 34773652
Alignment:
Q  659 tttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34773607 tttattttaaaagttactatctttttcttctcatctctctctctct 34773652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 7100161 - 7100246
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||| ||||||| ||| |||||  | | |||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||    
T  7100161 ggggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 7100246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 424
Target Start/End: Complemental strand, 8794469 - 8794384
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||| ||||||| ||| |||||  | | |||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||    
T  8794469 ggggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 8794384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 5957152 - 5957208
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| || || ||||||||| ||||||||||||||||||||||    
T  5957152 gattttaaaagacttttttataataaaaaagtctagtggtattcaatcaagactttt 5957208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 11007741 - 11007688
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagac 420  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||    
T  11007741 agattttaaaagactttttaaatataaaaaagtcttgtggtatttaattaagac 11007688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 444 - 553
Target Start/End: Original strand, 656957 - 657065
Alignment:
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    |||| ||||||||||||| |||||| ||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||| |||||    
T  656957 tgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatc 657055  T
Q  544 attcaaattt 553  Q
    ||||||||||    
T  657056 attcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 708941 - 708997
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| || |||||||| ||| ||||||||||||||| ||||||    
T  708941 gattttaaaagacttttttataatgaaaaaatctagtggtattcaatcaaaactttt 708997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 390 - 474
Target Start/End: Original strand, 3848101 - 3848185
Alignment:
Q  390 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattt 474  Q
    |||||||||||| ||||||||||||||||| | ||||||| ||       |||||||||||||||||||| | | ||||||||||    
T  3848101 atgaaaaagtctggtggtattcaatcaagattctttgcaacttaaaaaaagtcttgtggtattcaatcaatattttttgtcattt 3848185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 639 - 690
Target Start/End: Complemental strand, 30385085 - 30385034
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctc 690  Q
    |||||||||||| |||||||||| |||||||| ||||||||| |||||||||    
T  30385085 tgagatttcttgagattgtttttcttttaaaaattactatctctttcttctc 30385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 8636753 - 8636696
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |||||||||||  ||||||||| ||||||||||||    
T  8636753 agattttaaaagacttttctatgatgaaaaagtcacgtggtattcgatcaagactttt 8636696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 30877878 - 30877934
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  30877878 gattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 10644071 - 10644016
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  10644071 attttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 680
Target Start/End: Complemental strand, 34759066 - 34759025
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatct 680  Q
    |||||||||||| |||| ||||| ||||||||||||||||||    
T  34759066 tgagatttcttgagattatttttcttttaaaagttactatct 34759025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 243; Significance: 1e-134; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 339 - 703
Target Start/End: Original strand, 6312454 - 6312821
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  6312454 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 6312553  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     || |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  6312554 agttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 6312653  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  6312654 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 6312753  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctc 703  Q
       |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312754 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctc 6312821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 339 - 704
Target Start/End: Original strand, 25612037 - 25612405
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||          
T  25612037 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaa 25612136  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||       |||||||||||||||    
T  25612137 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattca 25612236  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||   |  ||||| ||        
T  25612237 aaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaa 25612336  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25612337 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 25612405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 340 - 704
Target Start/End: Complemental strand, 29396707 - 29396340
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  29396707 ggggatgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 29396608  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
     |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       ||||||||||||||||    
T  29396607 atcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 29396508  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||         
T  29396507 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 29396408  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      |||||||||||| |||||||||| |||||||||||||||||| ||||| |||  ||||||||||||    
T  29396407 gatgagatttcttgagattgtttttgttttaaaagttactatctctttctcctcccctctctctctct 29396340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 339 - 704
Target Start/End: Complemental strand, 9322820 - 9322452
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  9322820 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 9322721  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
        |||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||       ||| |||||||||||    
T  9322720 aaatttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattca 9322621  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||   ||   |  ||||| ||        
T  9322620 aaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 9322521  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  9322520 agatgagatttcttgagattgtttttattttaaaatttactatctttttcttctcctctctctctctct 9322452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 341 - 704
Target Start/End: Complemental strand, 15835371 - 15835005
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 440  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  15835371 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 15835272  T
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 540  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||        ||||||||||||||||    
T  15835271 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaa 15835172  T
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnn 637  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||   |  ||||| ||          
T  15835171 atcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 15835072  T
Q  638 ntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
     |||||||||||| |||||||||| |||||||||||||||||| ||||| |||   |||||||||||    
T  15835071 atgagatttcttgagattgtttttgttttaaaagttactatctctttctcctcccttctctctctct 15835005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 371 - 704
Target Start/End: Original strand, 51701494 - 51701828
Alignment:
Q  371 tttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtc 470  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  51701494 tttaaaaga-tttttaattat-aaaaagttttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctttgtc 51701591  T
Q  471 attttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 570  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  51701592 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 51701691  T
Q  571 aattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntgagatttcttgtgattgtttttatttta 667  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||       |||||||| ||| ||||||||||||||||    
T  51701692 aattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttttgagattgtttttatttta 51701791  T
Q  668 aaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||||||||||||||||||||||||||||    
T  51701792 aaagttactatctttttcttctcatctctctctctct 51701828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 340 - 704
Target Start/End: Original strand, 46327923 - 46328290
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||           
T  46327923 ggggatgcattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaaaactttttgcaacttaaaaaaa 46328022  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||| |||||||||||    
T  46328023 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaa 46328122  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnn 636  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||         
T  46328123 aatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaa 46328222  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      | |||||||| |  ||||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  46328223 gataagatttctcgaaattgtttttcttttaaaagttactatctctttcttctcctctctctctctct 46328290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 28387713 - 28387437
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||          
T  28387713 gggggatttattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaa 28387614  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||        ||||||||||||||    
T  28387613 agtcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattca 28387514  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28387513 aattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaatttta 28387437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 348 - 582
Target Start/End: Original strand, 18798380 - 18798614
Alignment:
Q  348 attggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||       ||||||||    
T  18798380 attggattaggattctatgagattttaaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtg 18798479  T
Q  448 gtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 547  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  18798480 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattc 18798579  T
Q  548 aaatttcgaaggattgtttaataaattggattttg 582  Q
    |||||||||||||||||||||||||||||||||||    
T  18798580 aaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 48177782 - 48177506
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||| ||||||||||||| ||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  48177782 ggggaatgtattggattaagattctatgggattttaaaatgttttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 48177683  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
      ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| | ||||||||| ||       |||||||||||||||    
T  48177682 aatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattca 48177583  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48177582 aaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 48177506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 339 - 593
Target Start/End: Original strand, 29219168 - 29219420
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  29219168 gggggatgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 29219267  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||| ||       |||||||||||||||    
T  29219268 agtcttgtggtattcaatcaagactc--tgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 29219365  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  29219366 aaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgt 29219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 339 - 581
Target Start/End: Original strand, 49230766 - 49231008
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||          
T  49230766 gggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaaattaaaaaa 49230865  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||||||||||||||    
T  49230866 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 49230965  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggatttt 581  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  49230966 aaatcattcaaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 338 - 593
Target Start/End: Complemental strand, 5495417 - 5495162
Alignment:
Q  338 ggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnn 437  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||         
T  5495417 ggggcgatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaagg 5495318  T
Q  438 nngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
      ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||| |||||||||    
T  5495317 aagtcttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattc 5495218  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||  |||||||||    
T  5495217 aaaatcatttaaatttcaaaggattatttaataaattggattttgtgggattttgt 5495162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 9577751 - 9577476
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||           
T  9577751 ggggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaagactatttgcaacttaaaaaaa 9577652  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    || |||| ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||| |||||| |||| ||       |||||||| |||||||    
T  9577651 gtattgttgtattcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaa 9577552  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  9577551 aatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaatttta 9577476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 345 - 613
Target Start/End: Original strand, 35279558 - 35279826
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       | |||    
T  35279558 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagactt 35279657  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||||||    
T  35279658 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatca 35279757  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattt 613  Q
    || ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||    
T  35279758 tttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattt 35279826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 335 - 615
Target Start/End: Original strand, 21222024 - 21222303
Alignment:
Q  335 taaggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnn 434  Q
    ||||||||| |||||||||| | ||||||| | ||||||||||| |||||| || |||||||||||||||||||||||||||||||| ||| ||||||      
T  21222024 taagggggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaa 21222123  T
Q  435 nnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggta 534  Q
         || ||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| | ||||    
T  21222124 aaaaagt-ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggta 21222222  T
Q  535 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  21222223 ttcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaatttta 21222303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 338 - 544
Target Start/End: Complemental strand, 8141449 - 8141243
Alignment:
Q  338 ggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnn 437  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  8141449 ggggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 8141350  T
Q  438 nngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
      || |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||       |||||| |||||||    
T  8141349 aagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattc 8141250  T
Q  538 aaaatca 544  Q
    |||||||    
T  8141249 aaaatca 8141243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 28824691 - 28824417
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| |||  |||||           
T  28824691 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaa 28824592  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| | |||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       ||||||||||||||||    
T  28824591 gtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaa 28824492  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||| | |||||||    
T  28824491 aatcattcaaatttcgaa-gattgtttaataaatcagattttgatggattttgtgggattttctagggaaatttta 28824417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 340 - 582
Target Start/End: Original strand, 45272468 - 45272708
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||| ||           
T  45272468 ggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaaatattgtggtattcaataaagactttttgcaacttaaaaaaa 45272567  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
     |||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||        ||| |||||||||||    
T  45272568 atcttgttgtattcaatcaaaactctttgtcattttaaa-aagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaa 45272666  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    ||| ||| ||||||||||||| |||||||||||||||||||||    
T  45272667 aattatttaaatttcgaagga-tgtttaataaattggattttg 45272708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 334 - 615
Target Start/End: Complemental strand, 45760334 - 45760053
Alignment:
Q  334 ctaaggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttn 433  Q
    |||||||||| |||||||||| | ||||||| | |||||||||||| ||||| || |||||||||||||||||||||||||||| ||| ||| ||||||     
T  45760334 ctaagggggg-tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactcttttcaattta 45760236  T
Q  434 nnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataa-gtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtgg 532  Q
          |||||||| ||||||||||||| ||||||||| |||||| || ||| || | ||||||||||||||| || |||| ||       |||| ||||    
T  45760235 aaaaaagtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 45760136  T
Q  533 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  45760135 tattcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 45760053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 335 - 615
Target Start/End: Original strand, 730025 - 730305
Alignment:
Q  335 taaggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnn 434  Q
    ||||||||| |||||||||| | ||||||| | ||||||||||||||||||  | |||||||||||||||||||||||||||||||| ||| ||||||      
T  730025 taagggggggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 730123  T
Q  435 nnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca-tttnnnnnnngtcttgtggt 533  Q
         |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||        |||| |||||    
T  730124 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggt 730223  T
Q  534 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||| | ||||||||||||||  ||||||||||||||||||| |||||| ||||| |||||||    
T  730224 attcaaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaatttta 730305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 50192871 - 50192594
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| ||||||| || | ||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||          
T  50192871 ggggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattctttccaatttaaaaaa 50192772  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattc 537  Q
      ||||||| ||||||||||||| || ||||||||||||| |||||||| | ||||||||||||||| || |||| ||        |||| |||||||||    
T  50192771 aatcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattc 50192672  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  50192671 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 50192594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 368 - 615
Target Start/End: Complemental strand, 35679419 - 35679172
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactcttt 467  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||| || ||| ||||||       |||||||||||||||||||||| |||||    
T  35679419 gattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaagattcttt 35679320  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttta 567  Q
    ||||||| ||| || |||||   ||||||||||||||| || |||| ||       ||| ||||||||||||||||||||||||||||||||||||||||    
T  35679319 gtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcgaaggattgttta 35679220  T
Q  568 ataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||  |||||||||||||||  ||||||||| ||||| |||||||    
T  35679219 ataaatcagattttgatggatttgatgggattttctagtgaaatttta 35679172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 32589274 - 32588997
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa-tttnnnnn 437  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||||||  ||| |||||||||||||||| ||| ||| |||         
T  32589274 gggggatgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaagttatgttgtattcaatcaagactcttttcaactttaaaaa 32589175  T
Q  438 nngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattc 537  Q
       |||| |||||||||||||||||||||| |||||  | |  | ||||| |  |||||||||||||| ||||||| ||       ||||||||||||||    
T  32589174 aaatcttctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattc 32589075  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||    
T  32589074 aaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaatttta 32588997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 49198581 - 49198313
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| |  ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  49198581 tgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaa-gtctt 49198483  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| ||||||||||||| |||||||||||| ||| |||| ||| | |||||||| |||||| || |||| ||       ||   ||||||||||||||||    
T  49198482 gtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatca 49198384  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  49198383 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 49198313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 393 - 615
Target Start/End: Complemental strand, 19452074 - 19451852
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    ||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||    
T  19452074 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggta 19451975  T
Q  493 ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    || |||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  19451974 tttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttg 19451875  T
Q  593 tgggattttgtagtgtaatttta 615  Q
    ||||||||| ||||| |||||||    
T  19451874 tgggattttctagtgaaatttta 19451852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 347 - 615
Target Start/End: Original strand, 49417972 - 49418240
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    |||||||| | ||||||| |||||||||||||||||||| || ||||||||||| |||| ||||||||||||||| ||| ||||||       |||||||    
T  49417972 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctttccaatttagaaaaagtcttgt 49418071  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
    | ||||||||||||| || ||||||||| ||| || |  || | |||||||| |||||| || |||| ||       |||| ||||||||||||||||||    
T  49418072 gttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 49418171  T
Q  547 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||||||||| || || |||||||    
T  49418172 caaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaatttta 49418240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 440 - 593
Target Start/End: Complemental strand, 38536308 - 38536155
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| | ||       ||||||||||||||||    
T  38536308 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaa 38536209  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38536208 aattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt 38536155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 440 - 593
Target Start/End: Complemental strand, 38558526 - 38558373
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| | ||       ||||||||||||||||    
T  38558526 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaa 38558427  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38558426 aattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt 38558373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 340 - 615
Target Start/End: Complemental strand, 6304573 - 6304296
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | |||||||   ||||||||||||||||||  | |||||||||||||||||||||||||||||||| ||| ||||||           
T  6304573 gggggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaagactatttccaatttaaaaaaa 6304474  T
Q  440 -gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaaga-cttttcatcatttnnnnnnngtcttgtggtattc 537  Q
     ||  |||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||| ||| | || || |||| ||       |||| |||||||||    
T  6304473 agtactgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattc 6304374  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  6304373 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 6304296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 47654668 - 47654395
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    |||||||||| | ||||||| | ||||||||||||||||||  || |||||||||||||||||||||| ||||||||| ||| ||||||       ||||    
T  47654668 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaaaaaagtct 47654569  T
Q  444 t-gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 541  Q
    | ||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||| ||| || |||| ||        |||| |||||||||||||    
T  47654568 ttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaa 47654469  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    | ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||| | |||||||    
T  47654468 ttattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaatttta 47654395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 358 - 615
Target Start/End: Original strand, 29556007 - 29556260
Alignment:
Q  358 gattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatc 457  Q
    ||||||| | |||||||||||||||||| ||    ||||||| ||||||||||||||||||||| ||| ||||||       |||||||| ||||||||     
T  29556007 gattctaagggattttaaaagacttttttat----aaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatt 29556102  T
Q  458 aagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 557  Q
    |||| || |||| |||| ||| |||||||| | ||||||||||||||| || |||| ||        ||| ||| |||||||||||||||||||||||||    
T  29556103 aagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaa 29556202  T
Q  558 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
     |||||||||||||||| |||||||||||||||| ||||||||| || || |||||||    
T  29556203 agattgtttaataaattagattttgatggattttatgggattttctaatgaaatttta 29556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 401 - 615
Target Start/End: Original strand, 45535886 - 45536100
Alignment:
Q  401 ttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatca 500  Q
    ||||| ||||||||||||||| ||| ||||||       |||||||| ||||||||||| | |||||||||||| ||  |||| ||| | ||||||||||    
T  45535886 ttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatca 45535985  T
Q  501 agacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattt 600  Q
    ||||| || |||  ||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||    
T  45535986 agactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattt 45536085  T
Q  601 tgtagtgtaatttta 615  Q
    | ||||| |||||||    
T  45536086 tctagtgaaatttta 45536100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 347 - 582
Target Start/End: Complemental strand, 48669084 - 48668852
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    ||||||||||||||  |||  |||||||||||| |||||||||||||||| || ||| |||||| |||||| |  ||||| |||||       || ||||    
T  48669084 tattggattaggatattataggattttaaaagattttttaattatgaaaaggttttgaggtatttaatcaaaaaattttgtaatttaaaaaacgttttgt 48668985  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
    | |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    ||||||||| ||       |||  |||||||||||||| |||    
T  48668984 gatattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcat---ttttcatcacttaaaaaaagtcacgtggtattcaaaattatt 48668888  T
Q  547 caaatttcgaaggattgtttaataaattggattttg 582  Q
    ||||||||||| ||||||||||||||||||||||||    
T  48668887 caaatttcgaaagattgtttaataaattggattttg 48668852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 440 - 615
Target Start/End: Complemental strand, 37014859 - 37014684
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||| |||||||||||||||||  || |||||||| | ||||||||||| | | ||||||| ||       |||||||| |||||||    
T  37014859 gtcttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaa 37014760  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||| || |||||||| |||||||| ||||||||||||||||| ||||||| ||||| |||||||    
T  37014759 aatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaatttta 37014684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 347 - 615
Target Start/End: Original strand, 48524208 - 48524475
Alignment:
Q  347 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgt 446  Q
    |||||||| | ||||||| |  |||||||||||||||||| | || ||||||| |||  |||||||||||||||| ||| ||||||       |||||||    
T  48524208 tattggatcatgattctaaggaattttaaaagacttttta-tcataaaaaagttttgcagtattcaatcaagactctttccaatttaaaaaaagtcttgt 48524306  T
Q  447 ggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 546  Q
    | ||||||||||||| | |||||||||| ||| || || || | |||| |||||| ||| || |||| ||       |||||||| ||||||||||||||    
T  48524307 gttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcatt 48524406  T
Q  547 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||| ||| |||||||||||||||  | |||||||||||||||||||||||| ||||| |||||||    
T  48524407 caaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaatttta 48524475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 340 - 505
Target Start/End: Original strand, 953700 - 953865
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||           
T  953700 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 953799  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagact 505  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||| |||||||||    
T  953800 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagact 953865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 334 - 546
Target Start/End: Original strand, 22183246 - 22183457
Alignment:
Q  334 ctaaggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttn 433  Q
    |||||||||| |||||||||| | |||||||   |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||     
T  22183246 ctaagggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattta 22183344  T
Q  434 nnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggt 533  Q
          || ||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||| | || |||| ||       |||| |||||    
T  22183345 aaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggt 22183444  T
Q  534 attcaaaatcatt 546  Q
    |||||||||||||    
T  22183445 attcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 337 - 503
Target Start/End: Complemental strand, 19452172 - 19452006
Alignment:
Q  337 aggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnn 436  Q
    ||||||| |||||||||| | ||||||| | |||||||||||||||||| ||  ||||||||||||||||||||||||||||||| ||| ||||||        
T  19452172 agggggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaa 19452073  T
Q  437 nnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaaga 503  Q
       ||||||||||||||||||||||||||||   |||| ||| |||||||| | |||||||||||||    
T  19452072 aaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19452006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 337 - 591
Target Start/End: Original strand, 33025390 - 33025645
Alignment:
Q  337 aggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnn 436  Q
    ||||||| |||||||||| | ||||||| |||| ||||||||||||||| || |||||||| ||||||||||||||||||| |  |||| ||||||        
T  33025390 agggggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaaaaaattttccaatttaaaa 33025489  T
Q  437 nnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatc-aagacttttcatcatttnnnnnnngtcttgtggtat 535  Q
       || ||||  ||||||||||||| |||||| |||||| || || ||||| | ||||||||| || ||| || |||| ||       ||||||||||||    
T  33025490 aaagttttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtat 33025589  T
Q  536 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||||||||||||||||| |||||||||||||||| ||  |||||||  |||||||    
T  33025590 tcaaaatcattcaaattttgaaggattgtttaatacatcagattttgtgggatttt 33025645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 393 - 615
Target Start/End: Original strand, 47780644 - 47780867
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn-gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagat 491  Q
    ||||||||||||| ||||||||||||||| ||| ||||||        |||||||| ||||||||||||| | | |||||||| ||| ||||| || | |    
T  47780644 aaaaagtcttgtgttattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggt 47780743  T
Q  492 attcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||||||||||||| || |||| ||       |||| ||| |||||||||||||||||| ||  ||||||||||||||||||  ||||||||||||||||    
T  47780744 attcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatggatttt 47780843  T
Q  592 gtgggattttgtagtgtaatttta 615  Q
    |||||||||| ||||| |||||||    
T  47780844 gtgggattttctagtgaaatttta 47780867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 339 - 428
Target Start/End: Original strand, 42290724 - 42290813
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgca 428  Q
    ||||||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42290724 gggggatttattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgca 42290813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 527 - 615
Target Start/End: Complemental strand, 31572329 - 31572241
Alignment:
Q  527 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaatttta 31572241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 38536366 - 38536280
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    |||||||||||| ||||||||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  38536366 ggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttg 38536280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 38558584 - 38558498
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    |||||||||||| ||||||||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  38558584 ggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttg 38558498  T

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Target: chr1; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 14494122 - 14494237
Alignment:
Q  372 ttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtca 471  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| |||||||||    
T  14494122 ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtca 14494221  T
Q  472 ttttaaataagtcttg 487  Q
    ||| ||| ||||||||    
T  14494222 tttaaaaaaagtcttg 14494237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 337 - 423
Target Start/End: Original strand, 42657709 - 42657795
Alignment:
Q  337 aggggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagacttt 423  Q
    ||||||| |||||||||||  ||||  | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42657709 agggggggtgtattggattgagatttcaagagattttaaaagactttttaattataaaaaagtcttgtggtattcaatcaagacttt 42657795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 47784363 - 47784466
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    ||||||||||||| ||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||| |||||| |||||||| | ||    
T  47784363 aaaaagtcttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggta 47784461  T
Q  493 ttcaa 497  Q
    |||||    
T  47784462 ttcaa 47784466  T

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Target: chr1; HSP #49
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 440 - 582
Target Start/End: Original strand, 47784368 - 47784509
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||||| ||||  | || ||| |||||||| | ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  47784368 gtcttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaa-gtcttgtggtattcaa 47784466  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    ||| ||||||| ||| || ||||||||||||||||||||||||    
T  47784467 aattattcaaacttctaaagattgtttaataaattggattttg 47784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 345 - 432
Target Start/End: Original strand, 47780505 - 47780592
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 432  Q
    |||||||||| | ||||||| || ||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||| ||||||    
T  47780505 tgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 47780592  T

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Target: chr1; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 524 - 615
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  524 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||||||| ||||||||| ||||| | ||| |||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 532 - 591
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  532 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 19007637 - 19007581
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  19007637 gattttaaaagacttttttataatgaaaaagtctagtggtattcaatcaagactttt 19007581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 51826894 - 51826838
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||    
T  51826894 gattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaagactttt 51826838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 25831196 - 25831139
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    ||||||||||||||||||||||||||||| |||| || |||||||| |||||||||||    
T  25831196 attttaaaagactttttaattatgaaaaaatcttttgatattcaattaagactttttg 25831139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 38536116 - 38536051
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| ||||||||||||| |||| | ||||||| |||||||||||||    
T  38536116 tgagatttcttgagattgtttttcttttaaaagttacaatctctctcttctcctctctctctctct 38536051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 38558334 - 38558269
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| ||||||||||||| |||| | ||||||| |||||||||||||    
T  38558334 tgagatttcttgagattgtttttcttttaaaagttacaatctctctcttctcctctctctctctct 38558269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 27198297 - 27198353
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  27198297 gattttaaaagactttttgtttataaaaaagtcttgtggtattcaatcaaaactttt 27198353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 48194616 - 48194672
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||    
T  48194616 gattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 48194672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 48203374 - 48203430
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||    
T  48203374 gattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 48203430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 582
Target Start/End: Complemental strand, 31622591 - 31622536
Alignment:
Q  527 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 432
Target Start/End: Complemental strand, 31572464 - 31572390
Alignment:
Q  358 gattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 432  Q
    ||||||| | |||||||| ||||||||| || ||||||||||||||||||||||| |||| |||| || ||||||    
T  31572464 gattctaagggattttaagagacttttttatcatgaaaaagtcttgtggtattcattcaaaacttcttccaattt 31572390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 505
Target Start/End: Complemental strand, 19452111 - 19452046
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagact 505  Q
    ||||||||||||||||||||||||||||   |||| ||| |||||||| | |||||||||||||||    
T  19452111 gtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 19452046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 14555369 - 14555313
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| || || ||||||| | ||||||||||||||||||||||    
T  14555369 gattttaaaagacttttttataataaaaaagtttggtggtattcaatcaagactttt 14555313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 639 - 690
Target Start/End: Complemental strand, 28387410 - 28387359
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctc 690  Q
    |||||||||||| |||||||||| |||||||||||| ||||| |||||||||    
T  28387410 tgagatttcttgagattgtttttgttttaaaagttattatctctttcttctc 28387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 42055116 - 42055175
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgt 404  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||  || ||||||||||||    
T  42055116 tgtattgaattaggattatatgagattttaaaaaactttttaaaaataaaaaagtcttgt 42055175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 14494149 - 14494211
Alignment:
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaaga 503  Q
    |||||||||||||||||||||||||||   |||| ||| |||||||| | |||||||||||||    
T  14494149 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 14494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 592
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  546 tcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 419
Target Start/End: Complemental strand, 19684751 - 19684674
Alignment:
Q  342 ggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 419  Q
    |||| ||||||||||||||||||  | ||||||||| | |||||||| |  ||||||||||||| |||||||| ||||    
T  19684751 ggatatattggattaggattctaaaatattttaaaatattttttaatgaaaaaaaagtcttgtgatattcaattaaga 19684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 1928462 - 1928406
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  1928462 gattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 10896826 - 10896882
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||| ||||| ||| | ||||||||||  ||||||||||||||||||||    
T  10896826 gattttaaaagatttttttattttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 345 - 417
Target Start/End: Original strand, 19893454 - 19893526
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 417  Q
    ||||||| |||| |||| || | ||||||||||||||||||||| || ||||| |||||  ||||||||||||    
T  19893454 tgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaaatcttggagtattcaatcaa 19893526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 36402273 - 36402329
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||  ||||||||||||||||||||    
T  36402273 gattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 615
Target Start/End: Complemental strand, 5495181 - 5495150
Alignment:
Q  584 tggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||    
T  5495181 tggattttgtgggattttgtagtgtaatttta 5495150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 424
Target Start/End: Original strand, 43553539 - 43553618
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||| |||| ||||  | |||||||||| |||| |||| || || ||||||||||||||||| |||| |||||||||    
T  43553539 tgtattgaattaagatttcaagagattttaatagacattttcataataaaaaagtcttgtggtatacaattaagactttt 43553618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 690
Target Start/End: Original strand, 45272758 - 45272809
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctc 690  Q
    |||||||| ||| |||||||||| |||||||||||| ||||| |||||||||    
T  45272758 tgagattttttgagattgtttttcttttaaaagttattatctgtttcttctc 45272809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 33243369 - 33243312
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||||  || | ||||||| ||  ||||||||||||||||||||    
T  33243369 agattttaaaagacttttttgttttaaaaaagtttttaggtattcaatcaagactttt 33243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 33263542 - 33263485
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||||  || | ||||||| ||  ||||||||||||||||||||    
T  33263542 agattttaaaagacttttttgttttaaaaaagtttttaggtattcaatcaagactttt 33263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 52705418 - 52705475
Alignment:
Q  367 agattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  52705418 agattttaaaagatttttttgttttataaaagtcttgtggtattcaatcaagattttt 52705475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 240; Significance: 1e-132; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 339 - 704
Target Start/End: Complemental strand, 14000424 - 14000056
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  14000424 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 14000325  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
      ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  14000324 aatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 14000225  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||        
T  14000224 aaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 14000125  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000124 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctcatctctctctctct 14000056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 339 - 690
Target Start/End: Complemental strand, 1152422 - 1152068
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||          
T  1152422 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagattttttgcaacttaaaaaa 1152323  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| ||       |||||||||||||||    
T  1152322 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattca 1152223  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||||||        
T  1152222 aaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaa 1152123  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctc 690  Q
       |||||||||||  |||||||||| |||||||||||||||||| |||||||||    
T  1152122 agatgagatttcttaagattgtttttcttttaaaagttactatctctttcttctc 1152068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 339 - 615
Target Start/End: Complemental strand, 4550576 - 4550300
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  4550576 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 4550477  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||||||||||||||||||| ||       |||||||||||||||    
T  4550476 agtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 4550377  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4550376 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaatttta 4550300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 342 - 704
Target Start/End: Original strand, 13925821 - 13926186
Alignment:
Q  342 ggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 441  Q
    |||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||       ||    
T  13925821 ggatgtgttggattaggattctataggattttaaaagattttttaattatgaaaaagtcttgtggtatttaatcaagactttttgcaacttaaaaaaagt 13925920  T
Q  442 cttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 541  Q
     |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| | ||       ||||||||||||||||||    
T  13925921 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaa 13926020  T
Q  542 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnn 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| |            
T  13926021 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaaga 13926120  T
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    ||| |||||||| |||||||||| || ||||||||||||||| ||||||||| | |||||||||||    
T  13926121 tgatatttcttgagattgtttttcttctaaaagttactatctctttcttctcctttctctctctct 13926186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 344 - 593
Target Start/End: Complemental strand, 4240766 - 4240517
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||        |||    
T  4240766 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatct 4240667  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       ||||||||||||||||||||    
T  4240666 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatc 4240567  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4240566 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt 4240517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 341 - 582
Target Start/End: Original strand, 37013803 - 37014044
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 440  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |    
T  37013803 gggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 37013902  T
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 540  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| ||       |||||| ||||||||||    
T  37013903 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaa 37014002  T
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttg 582  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  37014003 atcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 339 - 593
Target Start/End: Complemental strand, 40014018 - 40013767
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||          
T  40014018 gggggatgtattggattaggattct--gggattttaaaaga-tttttaattatgaaaaagtcttgtgatattcaatcaagactttttgcaatttaaaaaa 40013922  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||        ||||||| ||||||    
T  40013921 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattca 40013822  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  40013821 aaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt 40013767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 340 - 598
Target Start/End: Original strand, 22746185 - 22746443
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||           
T  22746185 ggggatgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcgattaagactttttgcaacttaaaaaaa 22746284  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||       |||||||| |||||||    
T  22746285 gtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaa 22746384  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 598  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  22746385 aatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtgggat 22746443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 339 - 593
Target Start/End: Original strand, 5948996 - 5949249
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||||||| ||          
T  5948996 gggggatgtgttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattcaatcaaaactttttgcaacttaaaaaa 5949095  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||| ||        ||||||||||||||    
T  5949096 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattca 5949194  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5949195 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 5949249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 21146954 - 21147230
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||| |||||||||| | ||||||| | |||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||| ||||||          
T  21146954 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaa 21147053  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||| ||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||    
T  21147054 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 21147153  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  21147154 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 21147230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 452 - 615
Target Start/End: Complemental strand, 7947779 - 7947616
Alignment:
Q  452 tcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 551  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||       |||||| | |||||||||||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  552 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaatttta 7947616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 33656356 - 33656084
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | |||| || | |||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  33656356 tgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 33656257  T
Q  445 gtggtattcaatcaagactcttt--gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 542  Q
    ||| ||||||||||||| |||||  ||||||| ||| |||||||| | ||||||||||||||| || |||| ||        |||  |||||||||||||    
T  33656256 gtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaat 33656157  T
Q  543 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  33656156 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 33656084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 407 - 593
Target Start/End: Complemental strand, 1461389 - 1461203
Alignment:
Q  407 tattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagactt 506  Q
    |||||||| |||||||||||||| ||       |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  1461389 tattcaattaagactttttgcaacttaaaaatagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagactt 1461290  T
Q  507 ttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||| ||       |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1461289 ttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 345 - 616
Target Start/End: Original strand, 6460685 - 6460956
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    ||||||| || | ||||||| | |||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||| ||| ||       |||||    
T  6460685 tgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaaaaagtctt 6460784  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
     || ||||||||||||| |||||||||||| ||| ||||| ||   ||||||||||||||| || |||||||        ||| ||||||||||||||||    
T  6460785 atgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatca 6460884  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttat 616  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||||    
T  6460885 ttcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttat 6460956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 370 - 615
Target Start/End: Original strand, 139191 - 139436
Alignment:
Q  370 ttttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgt 469  Q
    |||||||||||||||| || ||||||||||||| | |||||||||||||||| ||| ||||||       || ||||| ||||||||||||| |||||||    
T  139191 ttttaaaagacttttttataatgaaaaagtcttttagtattcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagattctttgt 139290  T
Q  470 cattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat 569  Q
    ||||| ||| ||||| || | |||||||||||||||||| |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||    
T  139291 catttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat 139390  T
Q  570 aaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||   |||||||||||||||||| |||||||  |||| |||||||    
T  139391 aaaccagattttgatggattttgttggattttccagtgaaatttta 139436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 345 - 615
Target Start/End: Complemental strand, 27459262 - 27458993
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | |||||||   |||||||||| ||||||| || |||||||||||| || |||||||||||||||| ||| ||||||       |||||    
T  27459262 tgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtctcgtagtattcaatcaagactctttccaatttaaaaaaagtctt 27459163  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
    ||| |||||||| |||| |||||||||||| ||| ||||||||   ||||||||||||||| || |||| ||       |||| ||||||||||||||||    
T  27459162 gtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatca 27459064  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  27459063 ttcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaatttta 27458993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 369 - 615
Target Start/End: Complemental strand, 32158188 - 32157940
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn-gtcttgtggtattcaatcaagactcttt 467  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||        |||||||| ||||||||||||| |||||    
T  32158188 attttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattcttt 32158089  T
Q  468 gtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgttt 566  Q
    ||||||| ||| |||||||| | ||||||||||||||   | |||| ||        |||| ||||||||||||||||||||||||||||||||||||||    
T  32158088 gtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgttt 32157989  T
Q  567 aataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||| |||||||| ||||||||||||||||| ||||  |||||||    
T  32157988 aataaattagattttgacggattttgtgggattttctagtaaaatttta 32157940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 393 - 615
Target Start/End: Complemental strand, 5273184 - 5272962
Alignment:
Q  393 aaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagata 492  Q
    ||||||||||||| ||||||||||||| ||||||  ||||       |||||||| ||||||||||||| |||||||||||| ||| |||||||  | ||    
T  5273184 aaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggta 5273085  T
Q  493 ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 592  Q
    ||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  5273084 ttcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttg 5272985  T
Q  593 tgggattttgtagtgtaatttta 615  Q
    ||||||||| ||||| |||||||    
T  5272984 tgggattttctagtgaaatttta 5272962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 480 - 704
Target Start/End: Original strand, 39852373 - 39852600
Alignment:
Q  480 aagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt 579  Q
    |||||||||| |||||||||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39852373 aagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggatt 39852472  T
Q  580 ttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntgagatttcttgtgattgtttttattttaaaagttact 676  Q
    |||||||||||| |||||||||||||||||||||||   ||   |  ||||| ||       |||||||||||| |||||||||| ||||||||||||||    
T  39852473 ttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttact 39852572  T
Q  677 atctttttcttctcatctctctctctct 704  Q
    |||| ||||| |||   |||||||||||    
T  39852573 atctctttctcctcccttctctctctct 39852600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 440 - 615
Target Start/End: Complemental strand, 7016957 - 7016782
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||   |||| ||| ||||||||   ||||||||||||||| || |||| ||       |||| |||||||||||    
T  7016957 gtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7016858  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  7016857 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 7016782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 390 - 606
Target Start/End: Complemental strand, 14465494 - 14465279
Alignment:
Q  390 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgag 489  Q
    ||||||||||||||||||||||||| || ||| ||| ||||||       |||| | |||||||||||||||||||||||||||| ||| |||| ||  |    
T  14465494 atgaaaaagtcttgtggtattcaattaaaactctttccaatttaaaaaaagtctgg-ggtattcaatcaagactctttgtcatttaaaaaaagttttctg 14465396  T
Q  490 atattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 589  Q
     ||||||||||||||| ||||||  ||       |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  14465395 gtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaatt 14465296  T
Q  590 ttgtgggattttgtagt 606  Q
    |||||| ||||| ||||    
T  14465295 ttgtggaattttctagt 14465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 345 - 601
Target Start/End: Original strand, 9689554 - 9689806
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||||| ||||||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||       ||| |    
T  9689554 tgtattggattatgattctaagggattttaatagacttttta-ttatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaagaagtcgt 9689652  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 544  Q
     ||||||||||||||||||| |||||| |||||| ||   | | | ||||||||||||||| ||||||| ||       ||||||||||||| |||||||    
T  9689653 ctggtattcaatcaagactc-ttgtca-tttaaaaaaacatcgtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatca 9689750  T
Q  545 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 601  Q
    || |||||||||| |||||||| ||||||| |||||||||||||| |||| ||||||    
T  9689751 tt-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagatttt 9689806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 345 - 429
Target Start/End: Complemental strand, 7948630 - 7948546
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 429  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaagtctcgtggtattcaatcaagactttttgcaa 7948546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 480 - 615
Target Start/End: Original strand, 849175 - 849310
Alignment:
Q  480 aagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt 579  Q
    |||||||| | ||||||||||||||| || |||| ||       ||||  ||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  849175 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatt 849274  T
Q  580 ttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||| |||||||||||||||| ||||| |||||||    
T  849275 ttgatagattttgtgggattttctagtgaaatttta 849310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 340 - 466
Target Start/End: Complemental strand, 7017015 - 7016889
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||           
T  7017015 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 7016916  T
Q  440 gtcttgtggtattcaatcaagactctt 466  Q
    ||||||| |||||||||||||||||||    
T  7016915 gtcttgtagtattcaatcaagactctt 7016889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 388 - 591
Target Start/End: Complemental strand, 9220977 - 9220774
Alignment:
Q  388 ttatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttg 487  Q
    |||| ||| |||| |||||||||||||||||||| ||||||| ||       ||| | || ||||||||||| ||||||||||||||  || ||||||||    
T  9220977 ttataaaagagtcgtgtggtattcaatcaagactatttgcaacttaaaaaaagtcatatgatattcaatcaaaactctttgtcatttagaaaaagtcttg 9220878  T
Q  488 agatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgga 587  Q
     ||||||||||||||||| || |||| ||       ||||| || |||||||||||||||||||||| |||||||||||||| |||| || ||||  |||    
T  9220877 tgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattagaatttgtagga 9220778  T
Q  588 tttt 591  Q
    ||||    
T  9220777 tttt 9220774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 345 - 503
Target Start/End: Complemental strand, 5273275 - 5273116
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaag-tcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    |||||||||| | |||| || | |||||||||||||||||| || ||||||||  ||||||||||||||||||||| | ||| ||||||       ||||    
T  5273275 tgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaaaaaagtct 5273176  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaaga 503  Q
    |||| ||||||||||||| | |||||||||| ||| |||||||| | |||||||||||||    
T  5273175 tgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaaga 5273116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 43319133 - 43319216
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagact 421  Q
    ||||| |||||||||| | ||||||| | ||||||||||||||||||  || ||||||||||||||||||||||||||||||||    
T  43319133 ggggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagact 43319216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 28594529 - 28594444
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagacttttta-attatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||| |||||| |||| ||||| || ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||    
T  28594529 gggggtgtatttgattgggattttaagagattttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagattttt 28594444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 345 - 466
Target Start/End: Complemental strand, 16894172 - 16894052
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| |  |||||| | |||||||||||||||||| || || ||||| ||||||||||||||||||| | | ||| ||||||       |||||    
T  16894172 tgtattggatcataattctaagggattttaaaagacttttttatcat-aaaaattcttgtggtattcaatcaaaattctttccaatttaaaaaaagtctt 16894074  T
Q  445 gtggtattcaatcaagactctt 466  Q
    ||||||||||||||||||||||    
T  16894073 gtggtattcaatcaagactctt 16894052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 26795691 - 26795635
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  26795691 gattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagactttt 26795635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 26806633 - 26806578
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  26806633 attttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagactttt 26806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 1511642 - 1511589
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 421  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  1511642 gattttaaaagacatttttattatgaaaaagtcttgtggtgttcaatcaagact 1511589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 4240478 - 4240413
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||||||||||||| || |  |||||||||||||    
T  4240478 tgagatttcttgagattgtttttcttttaaaagttactatctttttttttttttctctctctctct 4240413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 26806755 - 26806699
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||    
T  26806755 gattttaaaagacttttttattataaaaaaatcttgtgatattcaatcaagactttt 26806699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 26795569 - 26795514
Alignment:
Q  369 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  26795569 attttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaaaactttt 26795514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 27786213 - 27786280
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 412  Q
    |||||||||||| ||||  | | |||||||||||||||||| ||||| ||||||||||||||||||||    
T  27786213 tgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgtggtattca 27786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 9689396 - 9689338
Alignment:
Q  366 gagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||| ||||    
T  9689396 gagattttaaaagattttttaattataaaaaaatcttgaggtattcaatcaagattttt 9689338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 1461164 - 1461099
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||||||| | ||||||||| | ||||| |||||    
T  1461164 tgagatttcttgagattgtttttcttttaaaagttactatatctttcttctcctttctctatctct 1461099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 37014084 - 37014148
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||||||||  |||| |||| |||||||||||||    
T  37014084 tgagatttcttgagattgtttttcttttaaaagttactatccatttcctctc-tctctctctctct 37014148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 17518454 - 17518510
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || | ||||||||||||||||||||||||||| ||||    
T  17518454 gattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 1461357 - 1461257
Alignment:
Q  397 agtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattca 496  Q
    ||||||||||||||||||||||||| |||| |||||       |||||| ||||||||||||||||| ||  ||| || ||| |||||||| | ||||||    
T  1461357 agtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattca 1461258  T
Q  497 a 497  Q
    |    
T  1461257 a 1461257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 701
Target Start/End: Original strand, 5949288 - 5949350
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctc 701  Q
    |||||||||||| |||||||||| |||||||||||| ||||| ||| ||||| | ||||||||    
T  5949288 tgagatttcttgagattgtttttcttttaaaagttattatctctttattctcctttctctctc 5949350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 640 - 704
Target Start/End: Complemental strand, 7947588 - 7947524
Alignment:
Q  640 gagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||  ||||||||| |||||||||||| ||||| ||||||||| | |||||| ||||    
T  7947588 gagatttcttgaaattgtttttcttttaaaagttaatatctctttcttctcctttctctccctct 7947524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 40410616 - 40410672
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  40410616 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 40410672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 421
Target Start/End: Original strand, 849169 - 849200
Alignment:
Q  390 atgaaaaagtcttgtggtattcaatcaagact 421  Q
    ||||||||||||||||||||||||||||||||    
T  849169 atgaaaaagtcttgtggtattcaatcaagact 849200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 508
Target Start/End: Complemental strand, 5273220 - 5273153
Alignment:
Q  441 tcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagactttt 508  Q
    ||||||||||||||||||||| |||||   |||| ||| |||||||| | ||||||||||||| ||||    
T  5273220 tcttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 5273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 40013728 - 40013663
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttct-tctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||| ||||||||||||| | ||| |||| |||||||||||||    
T  40013728 tgagatttcttgagattgtttttgtttttaaagttactatctctctctctctc-tctctctctctct 40013663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 203; Significance: 1e-110; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 344 - 704
Target Start/End: Original strand, 10452 - 10815
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 443  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||    
T  10452 atgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtct 10551  T
Q  444 tgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 543  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||        |||||||||||||||||||    
T  10552 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatc 10651  T
Q  544 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntg 640  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||   ||   |  ||||| ||       ||    
T  10652 attcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 10751  T
Q  641 agatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||| |||   |||||||||||    
T  10752 agatttcttgagattgtttttgttttaaaagttactatctctttctcctcccttctctctctct 10815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 177; Significance: 5e-95; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 339 - 589
Target Start/End: Original strand, 4087 - 4337
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||          
T  4087 gggggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaa 4186  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattca 538  Q
     |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  4187 agtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 4286  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 589  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4287 aaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 172; Significance: 5e-92; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 339 - 615
Target Start/End: Original strand, 750 - 1026
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||          
T  750 ggggaatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaagactttttgcaacttaaaaaa 849  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtattc 537  Q
     ||||||||||||||||||||||||||||||||||||||| || || |||| ||||||||||||||||||||||| ||        ||||||||||||||    
T  850 agtcttgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattc 949  T
Q  538 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  950 aaaatcattcaaatttcgaagaattatttaataaa-tagattttgatggattttgtgggattttgtagtgtaatttta 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 700
Target Start/End: Original strand, 1053 - 1111
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctct 700  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||| | |||||||    
T  1053 tgagatttcttgagattgttttt---ttaaaagttactatctctttcttctcctttctctct 1111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 168; Significance: 1e-89; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 358 - 699
Target Start/End: Complemental strand, 39918 - 39574
Alignment:
Q  358 gattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatc 457  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||       || |||||||||||||||    
T  39918 gattctatgagattttaaaagaccttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatc 39819  T
Q  458 aagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 557  Q
    |||||||||||||||||| || |||||||||  ||||||||||||| ||||||||| ||       ||| ||||||||||||||||||||||| ||||||    
T  39818 aagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaacttcgaa 39719  T
Q  558 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnnnnntgagatttcttgtgat 654  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||   |  ||||| ||       | |||||||||| |||    
T  39718 ggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagat 39619  T
Q  655 tgtttttattttaaaagttactatctttttcttctcatctctctc 699  Q
    ||||||| |||||||||||||||||| ||||||||| | ||||||    
T  39618 tgtttttcttttaaaagttactatctctttcttctcctttctctc 39574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 372 - 615
Target Start/End: Complemental strand, 15320 - 15077
Alignment:
Q  372 ttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtca 471  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| |||||||||    
T  15320 ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtca 15221  T
Q  472 ttttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataa 571  Q
    ||| ||| ||||||||   ||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||    
T  15220 tttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa 15121  T
Q  572 attggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||  |||||||||||||||||||||||||| ||||| |||||||    
T  15120 atcagattttgatggattttgtgggattttctagtgaaatttta 15077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 372 - 615
Target Start/End: Complemental strand, 15963 - 15720
Alignment:
Q  372 ttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtca 471  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| |||||||||    
T  15963 ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtca 15864  T
Q  472 ttttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataa 571  Q
    ||| ||| ||||||||   ||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||    
T  15863 tttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa 15764  T
Q  572 attggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||  |||||||||||||||||||||||||| ||||| |||||||    
T  15763 atcagattttgatggattttgtgggattttctagtgaaatttta 15720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 110; Significance: 5e-55; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 340 - 615
Target Start/End: Original strand, 100099 - 100374
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || ||||||||||||| || ||||||||||| ||  ||| ||||||           
T  100099 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaacacactttccaatttaaaaaaa 100198  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||| | || |||||||||||| || |||| ||       |||| |||||||||||    
T  100199 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 100298  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||| ||||||||||||||||||   |||||||||||||||||||| |||| ||||| |||||||    
T  100299 aatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaatttta 100374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 440 - 704
Target Start/End: Original strand, 13870 - 14127
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||       ||||||||||||||||    
T  13870 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 13969  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgagatt---tcttttatnnnnn 636  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||          ||||  |||||| | |||     ||||| ||         
T  13970 aatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt----------agtgggattttaataagaaaaagtctttcatgaaaa 14059  T
Q  637 nntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
      |||||||||||| |||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  14060 gatgagatttcttgagattgtttttcttttaaaagttactatctctttcttctcatttctctctctct 14127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 13811 - 13969
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||          
T  13811 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaa 13910  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
     || ||| ||||||||||||||||| ||  ||| || ||| |||||||| | |||||||    
T  13911 agtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 13969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 109; Significance: 2e-54; HSPs: 4)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 440 - 593
Target Start/End: Complemental strand, 21457 - 21304
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||       ||||||||||||||||    
T  21457 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 21358  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 593  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  21357 aatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 339 - 497
Target Start/End: Complemental strand, 21516 - 21358
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||          
T  21516 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaa 21417  T
Q  439 ngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
     || ||| ||||||||||||||||| ||  ||| || ||| |||||||| | |||||||    
T  21416 agtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 21358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 21265 - 21200
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  21265 tgagatttcttgagattgtttttcttttaaaagttactatctctttcttctcatttctctctctct 21200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 28532 - 28597
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  28532 tgagatttcttgagattgtttttcttttaaaagttactatctctttcttctcatttctctctctct 28597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 440 - 690
Target Start/End: Complemental strand, 58295 - 58042
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagactttt-catcatttnnnnnnngtcttgtggtattca 538  Q
    |||||||||||||||||||||||| |||| ||  ||||| |||||||| | |||||| ||||||||||| ||||| ||       ||  |||||||||||    
T  58295 gtcttgtggtattcaatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattca 58197  T
Q  539 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttattgag---atttcttttatnnnn 635  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||   |  ||||| ||        
T  58196 aaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaa 58097  T
Q  636 nnntgagatttcttgtgattgtttttattttaaaagttactatctttttcttctc 690  Q
       |||||||||||| |||||||||| |||||||||||||||||| |||||||||    
T  58096 agatgagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 58042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 429
Target Start/End: Complemental strand, 58353 - 58264
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 429  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58353 ggggatgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 58264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 392 - 614
Target Start/End: Complemental strand, 806 - 584
Alignment:
Q  392 gaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagat 491  Q
    |||||||||||||||||||||||||||||| ||| ||||||       |||||||| ||||||||||||| |||||||||||| ||| |||| ||| | |    
T  806 gaaaaagtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggt 707  T
Q  492 attcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 591  Q
    |||||||||| ||| || |||| ||        | | ||||||||||||||||||||||||| |||||||||||||||||||   |||||||||||||||    
T  706 attcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggatttt 607  T
Q  592 gtgggattttgtagtgtaatttt 614  Q
    |||| ||||| ||||| ||||||    
T  606 gtggaattttctagtgaaatttt 584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 86; Significance: 1e-40; HSPs: 3)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 340 - 429
Target Start/End: Original strand, 14783 - 14872
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 429  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14783 ggggatgtattggatttggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 14872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 615
Target Start/End: Original strand, 14892 - 14923
Alignment:
Q  584 tggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||    
T  14892 tggattttgtgggattttgtagtgtaatttta 14923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 680
Target Start/End: Original strand, 14950 - 14991
Alignment:
Q  639 tgagatttcttgtgattgtttttattttaaaagttactatct 680  Q
    |||||||||||  |||||||||| ||||||||||||||||||    
T  14950 tgagatttcttaagattgtttttcttttaaaagttactatct 14991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 86; Significance: 1e-40; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 440 - 614
Target Start/End: Complemental strand, 39114 - 38940
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 539  Q
    |||||||||||||||||||||| ||||| |||||| ||| |||||||| | |||||||| |||||| || |||| ||       |||| ||| |||||||    
T  39114 gtcttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaa 39015  T
Q  540 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt 614  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  39014 aatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttt 38940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 340 - 497
Target Start/End: Complemental strand, 39172 - 39015
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 439  Q
    |||| |||||||||| | |||||||   |||||||||||||||||| || |||||||||||||||||||||||||||||| | |||   ||||           
T  39172 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattctttatcatttaaaaaaa 39073  T
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
    ||||||||||||||||| |||||||||  ||| || ||| |||||| | |||||||||    
T  39072 gtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaa 39015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 83; Significance: 6e-39; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 480 - 615
Target Start/End: Complemental strand, 37086 - 36951
Alignment:
Q  480 aagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt 579  Q
    |||||||| | ||||||||||||||| ||  ||||||       |||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  37086 aagtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattggatt 36987  T
Q  580 ttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||||||||||||||||||||||    
T  36986 ttgatggattttgtgggattttgtagtgtaatttta 36951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 37133 - 37056
Alignment:
Q  349 ttggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  37133 ttggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtgctattcaatcaagactctttg 37056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 497
Target Start/End: Complemental strand, 37084 - 37027
Alignment:
Q  440 gtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaa 497  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  37084 gtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 83; Significance: 6e-39; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 443 - 615
Target Start/End: Original strand, 102084 - 102258
Alignment:
Q  443 ttgtggtattcaatcaagactctttgtcattttaaataag--tcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 540  Q
    ||||| ||||||||||||| |||||||||||| ||| |||  ||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||    
T  102084 ttgtgttattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 102183  T
Q  541 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  102184 atcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 102258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 466
Target Start/End: Original strand, 102029 - 102151
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt--nnnnnnngtc 442  Q
    |||||| ||| | ||||||| | |||||||||||||||||| ||||  ||||||| ||||| ||||||||||||| | ||||  ||||         |||    
T  102029 tgtattagatcatgattctaagggattttaaaagacttttttatta-aaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagagtc 102127  T
Q  443 ttgtggtattcaatcaagactctt 466  Q
    ||||||||||||||||||||||||    
T  102128 ttgtggtattcaatcaagactctt 102151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 480 - 615
Target Start/End: Complemental strand, 38783 - 38649
Alignment:
Q  480 aagtcttgagatattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt 579  Q
    |||||||| | ||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||| |||  ||||    
T  38783 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat-aatcagatt 38685  T
Q  580 ttgatggattttgtgggattttgtagtgtaatttta 615  Q
    |||||||||||||||||||||| ||||| |||||||    
T  38684 ttgatggattttgtgggattttctagtgaaatttta 38649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 345 - 421
Target Start/End: Complemental strand, 38834 - 38758
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 421  Q
    |||||||||| | ||||||| | ||||||||||||  |||| || ||||||||||||||||||||||||||||||||    
T  38834 tgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgtggtattcaatcaagact 38758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 66; Significance: 9e-29; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 233685 - 233795
Alignment:
Q  400 cttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatc 499  Q
    |||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||| ||||||| || | |||||||    
T  233685 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatc 233784  T
Q  500 aagacttttca 510  Q
    || ||||||||    
T  233785 aaaacttttca 233795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 234533 - 234643
Alignment:
Q  400 cttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatc 499  Q
    |||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||| ||||||| || | |||||||    
T  234533 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatc 234632  T
Q  500 aagacttttca 510  Q
    || ||||||||    
T  234633 aaaacttttca 234643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 222517 - 222627
Alignment:
Q  400 cttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttgtggtattcaatcaagactctttgtcattttaaataagtcttgagatattcaatc 499  Q
    |||||||||||||||||| ||||||||||| |        |||||||||||||||||||| |||||||||||||||||| ||||||| || | |||||||    
T  222517 cttgtggtattcaatcaaaactttttgcaactaagaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatc 222616  T
Q  500 aagacttttca 510  Q
    || ||||||||    
T  222617 aaaacttttca 222627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 233719 - 233753
Alignment:
Q  392 gaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    |||||||||||||||||||||||||||||| ||||    
T  233719 gaaaaagtcttgtggtattcaatcaagactctttg 233753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 234567 - 234601
Alignment:
Q  392 gaaaaagtcttgtggtattcaatcaagactttttg 426  Q
    |||||||||||||||||||||||||||||| ||||    
T  234567 gaaaaagtcttgtggtattcaatcaagactctttg 234601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 345 - 483
Target Start/End: Original strand, 8655 - 8793
Alignment:
Q  345 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 444  Q
    |||||||||| | ||||||| | |||||||||||| ||||| || |||||||||| ||||||||||||||||||||||||| ||||||       |||||    
T  8655 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtctt 8754  T
Q  445 gtggtattcaatcaagactctttgtcattttaaataagt 483  Q
    ||| |||| |||||||| |||||||||||| ||| ||||    
T  8755 gtgttatttaatcaagattctttgtcatttaaaaaaagt 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 553 - 615
Target Start/End: Complemental strand, 3798 - 3736
Alignment:
Q  553 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 615  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 3736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 3705 - 3644
Alignment:
Q  643 atttcttgtgattgtttttattttaaaagttactatctttttcttctcatctctctctctct 704  Q
    |||| ||| |||||||||| |||||||||||||||||| |||||| || | |||||||||||    
T  3705 attttttgagattgtttttcttttaaaagttactatctctttcttttcctttctctctctct 3644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 12091 - 12030
Alignment:
Q  341 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtctt 402  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12091 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtctt 12030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 11998 - 12056
Alignment:
Q  344 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtctt 402  Q
    ||||||||||||||||||||||| |||||||||||||||||| || || ||||||||||    
T  11998 atgtattggattaggattctatgggattttaaaagactttttcataattaaaaagtctt 12056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 11846 - 11790
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  11846 gattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagactttt 11790  T

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Target: scaffold0007 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 532 - 607
Target Start/End: Original strand, 199905 - 199980
Alignment:
Q  532 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 607  Q
    ||||| |||||||||||||||| ||| || |||||||||||||| |||||||| ||||||||| |||||| |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtg 199980  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 424
Target Start/End: Complemental strand, 81869 - 81784
Alignment:
Q  339 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    ||||| |||||||||||  |||| ||   ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  81869 ggggggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 81784  T

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Target: scaffold0472 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 1971 - 1887
Alignment:
Q  340 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 424  Q
    |||| ||||||| || | |||| || ||||||||||||||||||||||| || ||||| | | |||||||||||| |||| ||||    
T  1971 gggggtgtattgaatcaagattttaagagattttaaaagactttttaataataaaaaaatttggtggtattcaattaagattttt 1887  T

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Target: scaffold0202 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 16602 - 16545
Alignment:
Q  368 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagacttttt 425  Q
    |||||| |||||||||||  || | |||||||||||||||||| |||||||| |||||    
T  16602 gattttgaaagacttttttgttttaaaaaagtcttgtggtatttaatcaagatttttt 16545  T

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