View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5104_high_15 (Length: 242)
Name: NF5104_high_15
Description: NF5104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5104_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 10517570 - 10517342
Alignment:
| Q |
1 |
cttgaaatgacttaaactaaatcttatagcatccttttacacttatcatacaatagtaatctctttacattggttctgcaaatttcccagcctcaaaatt |
100 |
Q |
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| T |
10517570 |
cttgaaatgacttaaactaaatcttatagcatccttttacacttatcatacaatagtaatctctttacattggttctgcaaatttcccagcctcaaaatt |
10517471 |
T |
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| Q |
101 |
gaagggacaaataatttgattgttttcttttcgttctttctttttatacttaagttttccacttcagggttgtttcaggcgaaacgtgacagttgtaact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10517470 |
gaagggacaaataatttgattgttttcttttcgttctttctttttatacttaagttttccacttcagggttgtttcaggcgaaacgtgacagttgtaact |
10517371 |
T |
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| Q |
201 |
atgtatgcatcattgggagaggaagcttt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
10517370 |
atgtatgcatcattgggagaggaagcttt |
10517342 |
T |
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