View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5105_low_3 (Length: 278)

Name: NF5105_low_3
Description: NF5105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5105_low_3
NF5105_low_3
[»] chr5 (13 HSPs)
chr5 (16-211)||(38144525-38144720)
chr5 (28-211)||(19512257-19512441)
chr5 (28-211)||(28370055-28370238)
chr5 (23-205)||(22751018-22751201)
chr5 (23-137)||(23528577-23528690)
chr5 (28-92)||(18407944-18408008)
chr5 (17-83)||(22438736-22438803)
chr5 (28-92)||(23111200-23111264)
chr5 (27-82)||(19236900-19236955)
chr5 (16-83)||(42961566-42961633)
chr5 (16-137)||(34830029-34830150)
chr5 (27-80)||(22461158-22461211)
chr5 (27-80)||(22467782-22467835)
[»] scaffold0026 (2 HSPs)
scaffold0026 (27-211)||(111557-111741)
scaffold0026 (17-205)||(11840-12029)
[»] chr2 (15 HSPs)
chr2 (28-208)||(19661454-19661634)
chr2 (28-211)||(6483589-6483772)
chr2 (28-211)||(6487056-6487239)
chr2 (17-208)||(26583702-26583892)
chr2 (28-211)||(23101463-23101647)
chr2 (30-211)||(23089057-23089239)
chr2 (30-211)||(23878879-23879060)
chr2 (27-137)||(5706023-5706133)
chr2 (28-92)||(23265133-23265197)
chr2 (28-92)||(23280201-23280265)
chr2 (28-89)||(21908353-21908414)
chr2 (28-84)||(24661576-24661632)
chr2 (27-82)||(10577-10632)
chr2 (27-82)||(25180929-25180984)
chr2 (18-99)||(26885166-26885246)
[»] chr7 (24 HSPs)
chr7 (24-208)||(14422858-14423043)
chr7 (28-211)||(16009448-16009631)
chr7 (23-205)||(18873237-18873420)
chr7 (28-205)||(15168052-15168230)
chr7 (32-205)||(10895795-10895969)
chr7 (17-205)||(12709833-12710022)
chr7 (17-205)||(13122904-13123093)
chr7 (17-207)||(13743584-13743774)
chr7 (30-208)||(16677167-16677348)
chr7 (30-208)||(17651403-17651584)
chr7 (17-204)||(12590633-12590818)
chr7 (17-137)||(13007378-13007497)
chr7 (17-83)||(21230949-21231015)
chr7 (28-83)||(11382871-11382926)
chr7 (28-83)||(11389348-11389403)
chr7 (17-83)||(20311039-20311107)
chr7 (28-91)||(13679485-13679548)
chr7 (27-82)||(2971254-2971309)
chr7 (27-82)||(20906461-20906516)
chr7 (28-82)||(11311059-11311113)
chr7 (22-63)||(831628-831669)
chr7 (22-63)||(1196808-1196849)
chr7 (22-63)||(34958578-34958619)
chr7 (28-84)||(46625961-46626017)
[»] chr8 (15 HSPs)
chr8 (27-211)||(44477494-44477678)
chr8 (27-211)||(44492652-44492836)
chr8 (30-211)||(8727735-8727917)
chr8 (17-205)||(23866491-23866680)
chr8 (17-137)||(17054537-17054656)
chr8 (119-211)||(27940946-27941038)
chr8 (28-137)||(18614217-18614327)
chr8 (28-92)||(23482053-23482117)
chr8 (17-83)||(14056553-14056619)
chr8 (28-84)||(39364919-39364975)
chr8 (17-83)||(25111976-25112042)
chr8 (28-82)||(29643386-29643440)
chr8 (27-82)||(24320670-24320725)
chr8 (16-83)||(27940840-27940907)
chr8 (28-84)||(21931696-21931752)
[»] chr3 (21 HSPs)
chr3 (28-211)||(9534199-9534382)
chr3 (27-211)||(23370505-23370690)
chr3 (28-205)||(14762758-14762936)
chr3 (30-205)||(38310802-38310978)
chr3 (30-205)||(20247791-20247967)
chr3 (30-207)||(24192830-24193009)
chr3 (17-208)||(16801457-16801648)
chr3 (17-105)||(41455087-41455174)
chr3 (27-137)||(24933828-24933937)
chr3 (30-209)||(55499104-55499285)
chr3 (28-89)||(18929239-18929300)
chr3 (28-92)||(17240513-17240577)
chr3 (27-82)||(13302240-13302295)
chr3 (27-82)||(13323787-13323842)
chr3 (27-82)||(12033444-12033499)
chr3 (27-82)||(13312896-13312951)
chr3 (27-82)||(17131732-17131787)
chr3 (27-82)||(51301589-51301644)
chr3 (27-101)||(10389443-10389517)
chr3 (27-101)||(10414532-10414606)
chr3 (27-101)||(10421202-10421276)
[»] scaffold0553 (1 HSPs)
scaffold0553 (27-211)||(10195-10380)
[»] scaffold0544 (1 HSPs)
scaffold0544 (27-211)||(1525-1710)
[»] chr6 (23 HSPs)
chr6 (28-211)||(23839069-23839253)
chr6 (17-211)||(10986170-10986365)
chr6 (28-208)||(4477731-4477912)
chr6 (28-205)||(23057815-23057993)
chr6 (17-205)||(29614136-29614325)
chr6 (17-208)||(18800311-18800503)
chr6 (17-161)||(930085-930229)
chr6 (17-137)||(12168309-12168428)
chr6 (17-137)||(19287218-19287337)
chr6 (17-137)||(19785859-19785978)
chr6 (17-137)||(19878402-19878521)
chr6 (17-137)||(19884178-19884297)
chr6 (30-211)||(21565214-21565396)
chr6 (27-110)||(34639986-34640069)
chr6 (27-110)||(34646660-34646743)
chr6 (27-133)||(25469704-25469808)
chr6 (17-83)||(24512833-24512899)
chr6 (28-84)||(25397172-25397228)
chr6 (28-80)||(9187498-9187550)
chr6 (28-84)||(19471335-19471391)
chr6 (28-84)||(25348486-25348542)
chr6 (27-111)||(31252394-31252478)
chr6 (30-84)||(25598643-25598697)
[»] chr1 (12 HSPs)
chr1 (28-211)||(20437024-20437208)
chr1 (17-137)||(41111981-41112100)
chr1 (28-92)||(32651563-32651627)
chr1 (28-83)||(19663517-19663572)
chr1 (28-92)||(18712790-18712854)
chr1 (28-84)||(20805320-20805376)
chr1 (28-83)||(11158093-11158148)
chr1 (30-84)||(10811785-10811839)
chr1 (27-82)||(20851132-20851187)
chr1 (27-82)||(20857759-20857814)
chr1 (27-82)||(21706276-21706331)
chr1 (27-82)||(21710818-21710873)
[»] scaffold0029 (1 HSPs)
scaffold0029 (17-205)||(111758-111948)
[»] scaffold1773 (1 HSPs)
scaffold1773 (20-205)||(1055-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (20-205)||(50056-50241)
[»] scaffold0247 (1 HSPs)
scaffold0247 (17-211)||(11212-11407)
[»] scaffold0025 (1 HSPs)
scaffold0025 (30-207)||(14398-14577)
[»] scaffold0924 (1 HSPs)
scaffold0924 (17-205)||(740-930)
[»] scaffold0058 (1 HSPs)
scaffold0058 (17-207)||(167-356)
[»] scaffold0117 (2 HSPs)
scaffold0117 (17-204)||(8564-8751)
scaffold0117 (17-204)||(1887-2074)
[»] chr4 (12 HSPs)
chr4 (17-204)||(8045822-8046009)
chr4 (17-205)||(11847984-11848179)
chr4 (27-137)||(53483650-53483760)
chr4 (17-83)||(15408139-15408205)
chr4 (28-84)||(8834895-8834951)
chr4 (28-84)||(13888641-13888697)
chr4 (30-111)||(14486632-14486713)
chr4 (28-84)||(15245215-15245271)
chr4 (33-84)||(22724691-22724742)
chr4 (27-137)||(27906210-27906321)
chr4 (22-63)||(15747551-15747592)
chr4 (28-84)||(15308120-15308176)
[»] scaffold0154 (1 HSPs)
scaffold0154 (17-208)||(30730-30923)
[»] scaffold0090 (1 HSPs)
scaffold0090 (16-207)||(18043-18236)
[»] scaffold0077 (1 HSPs)
scaffold0077 (30-211)||(3624-3806)
[»] scaffold0476 (1 HSPs)
scaffold0476 (30-211)||(3295-3478)
[»] scaffold0796 (2 HSPs)
scaffold0796 (22-137)||(1727-1841)
scaffold0796 (22-137)||(5750-5864)
[»] scaffold0456 (2 HSPs)
scaffold0456 (23-110)||(904-991)
scaffold0456 (23-110)||(8049-8136)
[»] scaffold0129 (1 HSPs)
scaffold0129 (21-137)||(45268-45384)
[»] scaffold0107 (1 HSPs)
scaffold0107 (17-83)||(40521-40587)
[»] scaffold0222 (1 HSPs)
scaffold0222 (28-92)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (28-92)||(116887-116951)
[»] scaffold0310 (1 HSPs)
scaffold0310 (17-83)||(17643-17710)
[»] scaffold0124 (1 HSPs)
scaffold0124 (28-83)||(34276-34331)
[»] scaffold0019 (1 HSPs)
scaffold0019 (17-83)||(135473-135539)
[»] scaffold0461 (1 HSPs)
scaffold0461 (28-92)||(8-72)
[»] scaffold0235 (1 HSPs)
scaffold0235 (17-81)||(22582-22646)
[»] scaffold0146 (1 HSPs)
scaffold0146 (28-92)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-92)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (17-79)||(1453-1515)
[»] scaffold2054 (1 HSPs)
scaffold2054 (17-116)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (27-111)||(5857-5941)
[»] scaffold0138 (1 HSPs)
scaffold0138 (28-84)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (14-49)||(5487-5522)
[»] scaffold0317 (1 HSPs)
scaffold0317 (28-91)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (28-83)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (18-99)||(493019-493099)
[»] scaffold0096 (1 HSPs)
scaffold0096 (24-84)||(39503-39563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (27-82)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (27-82)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (27-82)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (28-82)||(1913-1967)
[»] scaffold0261 (1 HSPs)
scaffold0261 (17-82)||(23559-23624)
[»] scaffold0453 (1 HSPs)
scaffold0453 (27-111)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (28-84)||(2628-2684)
[»] scaffold0034 (1 HSPs)
scaffold0034 (30-137)||(73229-73337)
[»] scaffold0003 (2 HSPs)
scaffold0003 (14-42)||(80293-80321)
scaffold0003 (14-42)||(100015-100043)


Alignment Details
Target: chr5 (Bit Score: 176; Significance: 7e-95; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 38144525 - 38144720
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattga 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  38144525 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattga 38144624  T
Q  116 gggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144625 gggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 38144720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 19512441 - 19512257
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  127 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19512341 tgatgatgattttgaggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactg 19512257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 28370055 - 28370238
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  128 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  28370155 gatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 28370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 22751201 - 22751018
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 122  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  123 ggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    ||||||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 22751018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 23528690 - 23528577
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 122  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  123 ggtttgatgatgatt 137  Q
    |||||||||||||||    
T  23528591 ggtttgatgatgatt 23528577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 22438736 - 22438803
Alignment:
Q  17 ttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438736 ttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 42961633 - 42961566
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961633 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 34830150 - 34830029
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattg 114  Q
    |||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| ||||||    
T  34830150 attctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattg 34830052  T
Q  115 agggttagggtttgatgatgatt 137  Q
    ||  ||||||| ||||| |||||    
T  34830051 agaattagggtatgatgctgatt 34830029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 80  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 80  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 165; Significance: 3e-88; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 111741 - 111557
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  127 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  111641 tgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 111557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 11840 - 12029
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11840 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgag 11939  T
Q  117 ggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
     |||||||||||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| |||| || ||||||||||||||||||    
T  11940 agttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatct 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 3e-88; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 19661454 - 19661634
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  128 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 208  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19661554 gatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 19661634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 6483772 - 6483589
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  128 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  6483672 gatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 6483589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 6487239 - 6487056
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  128 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  6487139 gatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 6487056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 26583892 - 26583702
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 26583794  T
Q  117 ggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 208  Q
    |||||||| |||||||||||| ||||||| | ||||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  26583793 ggttagggcttgatgatgattctgaggggaaagggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 26583702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 23101463 - 23101647
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 125  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  126 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  23101562 ttgatgatgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 23101647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 23089057 - 23089239
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 127  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  128 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||| | ||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  23089156 gatgatgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 23089239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 211
Target Start/End: Complemental strand, 23879060 - 23878879
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 128  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  129 atgatgattatgaggggtatggg-tattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
     |||||||| ||||||| ||||| || |||||||||||||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactg 23878879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 5706023 - 5706133
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 125  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  126 ttgatgatgatt 137  Q
    ||||||||||||    
T  5706122 ttgatgatgatt 5706133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 89  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  18 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 99  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 24 - 208
Target Start/End: Complemental strand, 14423043 - 14422858
Alignment:
Q  24 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttag 122  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  123 ggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 208  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14422943 ggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 14422858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 16009631 - 16009448
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  128 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16009531 gatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 16009448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 18873420 - 18873237
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 122  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  123 ggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    ||||||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 18873237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 15168230 - 15168052
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  128 gatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 15168052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 32 - 205
Target Start/End: Original strand, 10895795 - 10895969
Alignment:
Q  32 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 130  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  131 gatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  10895895 gatgattctgaggggaatgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 10895969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 12709833 - 12710022
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  117 ggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||||||||||||||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 12710022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 13122904 - 13123093
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  117 ggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||||||||||||||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 13123093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 13743774 - 13743584
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  117 ggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 207  Q
    |||||||||||||||||||||||| || |  ||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctat 13743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 16677348 - 16677167
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  128 gatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 208  Q
    |||||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 16677167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 17651584 - 17651403
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  128 gatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 208  Q
    |||||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 17651403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 12590633 - 12590818
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  117 ggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 204  Q
     |||||||||||||||||||| |||  || ||| |||  ||| |||||| || | ||| ||| ||||||| ||||||||| |||||||    
T  12590732 agttagggtttgatgatgattctga-tggaatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatc 12590818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 13007497 - 13007378
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  117 ggttagggtttgatgatgatt 137  Q
     ||||||||||||||||||||    
T  13007398 agttagggtttgatgatgatt 13007378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 21230949 - 21231015
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230949 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 20311039 - 20311107
Alignment:
Q  17 ttctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311039 ttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 13679548 - 13679485
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaatt 91  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataa 63  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataa 63  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataa 63  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 6e-86; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 44477678 - 44477494
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  127 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  44477578 tgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 44477494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 44492836 - 44492652
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  127 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  44492736 tgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 44492652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 8727735 - 8727917
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 128  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  129 atgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    | ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8727835 acgatgattctgaggggtatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 8727917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 23866680 - 23866491
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  117 ggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||||||||||||||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 23866491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 17054656 - 17054537
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  117 ggttagggtttgatgatgatt 137  Q
     ||||||||||||||||||||    
T  17054557 agttagggtttgatgatgatt 17054537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 27940946 - 27941038
Alignment:
Q  119 ttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  27940946 ttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactg 27941038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  127 tgatgatgatt 137  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 14056553 - 14056619
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056553 ttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 25112042 - 25111976
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112042 ttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 27940840 - 27940907
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  27940840 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 27940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 3e-85; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 9534382 - 9534199
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  128 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9534282 gatgatgattctgagtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 9534199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 23370505 - 23370690
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggt 125  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  126 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23370605 ttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 23370690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 14762758 - 14762936
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  128 gatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 14762936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 30 - 205
Target Start/End: Original strand, 38310802 - 38310978
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  130 tgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 38310978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 30 - 205
Target Start/End: Original strand, 20247791 - 20247967
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  130 tgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||| || ||||  ||||||| |||||||||||||| | ||||||| ||||||| ||||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatct 20247967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 30 - 207
Target Start/End: Complemental strand, 24193009 - 24192830
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtttg 128  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  129 atgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 207  Q
    ||||||||| || ||||  ||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctat 24192830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 16801457 - 16801648
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattga 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |||||| |||||||    
T  16801457 ttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattga 16801555  T
Q  116 gggttagggtttgatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 208  Q
     |||||||| |||||||||||| ||||| | |||| ||| |||||||||||| | |  |||||||| ||||||||||||||  ||||| |||||    
T  16801556 aggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaattcttaacctata 16801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 41455087 - 41455174
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaa 105  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaa 41455174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 24933828 - 24933937
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  127 tgatgatgatt 137  Q
    |||||||||||    
T  24933927 tgatgatgatt 24933937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 55499104 - 55499285
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 126  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  127 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatac 209  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| |||||  |||||||| ||||||||||||    
T  55499203 tgatgatgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatac 55499285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 89  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 10389443 - 10389517
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt 101  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttt 10389517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 10414532 - 10414606
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt 101  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttt 10414606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 10421202 - 10421276
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt 101  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttt 10421276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 10195 - 10380
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggt 125  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  126 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10295 ttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 10380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 1525 - 1710
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggt 125  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  126 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1625 ttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 4e-81; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 23839253 - 23839069
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  127 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    ||||||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23839153 tgatgatgattctaaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 23839069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 10986170 - 10986365
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattga 115  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  116 gggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  10986270 gggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 10986365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 28 - 208
Target Start/End: Complemental strand, 4477912 - 4477731
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  127 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 208  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  4477812 tgatgatgattctgaggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 4477731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 23057993 - 23057815
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  128 gatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 23057815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 29614136 - 29614325
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg-aagataaattga 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  116 gggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    ||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatct 29614325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 18800503 - 18800311
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagata-aattga 115  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  18800503 ttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattga 18800404  T
Q  116 gggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 208  Q
    |||||||||||||||||||||| ||  ||| ||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| |||||||||||    
T  18800403 gggttagggtttgatgatgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctata 18800311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  117 ggttagggtttgatgatgattatgaggggtatgggtattgatcat 161  Q
    |||||||||||||||||| || ||| ||| ||||||| |||||||    
T  930185 ggttagggtttgatgatgtttctgaagggaatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 12168428 - 12168309
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 12168330  T
Q  117 ggttagggtttgatgatgatt 137  Q
     ||||||||||||||||||||    
T  12168329 agttagggtttgatgatgatt 12168309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 19287337 - 19287218
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  117 ggttagggtttgatgatgatt 137  Q
     ||||||||||||||||||||    
T  19287238 agttagggtttgatgatgatt 19287218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 19785859 - 19785978
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |||     
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaa 19785957  T
Q  117 ggttagggtttgatgatgatt 137  Q
     ||||||||||||||||||||    
T  19785958 agttagggtttgatgatgatt 19785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 19878521 - 19878402
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19878423  T
Q  117 ggttagggtttgatgatgatt 137  Q
     ||||||||||||||||||||    
T  19878422 agttagggtttgatgatgatt 19878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 19884297 - 19884178
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19884199  T
Q  117 ggttagggtttgatgatgatt 137  Q
     ||||||||||||||||||||    
T  19884198 agttagggtttgatgatgatt 19884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 21565214 - 21565396
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 127  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  128 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||| | ||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  21565313 gatgatgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 21565396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 34639986 - 34640069
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 110  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 34646660 - 34646743
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 110  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 25469704 - 25469808
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  127 tgatgat 133  Q
    |||||||    
T  25469802 tgatgat 25469808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 24512833 - 24512899
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512833 ttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 80  Q
    ||||||||||||||||||||||||| |||||| ||||  ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 111  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 4e-81; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 20437024 - 20437208
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  127 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    ||||||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  20437124 tgatgatgattctgaggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactg 20437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 41112100 - 41111981
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||  |||     
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaa 41112002  T
Q  117 ggttagggtttgatgatgatt 137  Q
     ||||||||||||||||||||    
T  41112001 agttagggtttgatgatgatt 41111981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 111948 - 111758
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattga 111849  T
Q  116 gggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||||||||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  111848 gggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 111758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 205
Target Start/End: Complemental strand, 1240 - 1055
Alignment:
Q  20 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 119  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  120 tagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    ||||||||||||| ||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 205
Target Start/End: Complemental strand, 50241 - 50056
Alignment:
Q  20 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 119  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  120 tagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    ||||||||||||| ||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 50056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 11407 - 11212
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagata-aattga 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  11407 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattga 11308  T
Q  116 gggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||||||||||||||| ||  ||| ||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| ||||||| ||||||    
T  11307 gggttagggtttgatgatgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactg 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 30 - 207
Target Start/End: Original strand, 14398 - 14577
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtttg 128  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  129 atgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 207  Q
    ||||||||| || ||||  ||||||| |||||||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctat 14577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 740 - 930
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  116 gggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    ||||||||||||||||| ||||||| ||||  ||||||| |||||||| |||| || ||||||| ||||||| || || ||||||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 356 - 167
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 258  T
Q  117 ggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 207  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  257 ggttagggtttgatgatgattctgaggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctat 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 8564 - 8751
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 115  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  116 gggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 204  Q
    ||||||||||||||||||||||||||  || ||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  8664 gggttagggtttgatgatgattatga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatc 8751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 1887 - 2074
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 115  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  116 gggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 204  Q
    |||||||||||||||||||||| |||  || ||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  1987 gggttagggtttgatgatgattttga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatc 2074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 8045822 - 8046009
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaattgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  117 ggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 204  Q
    ||||||||||||| ||  ||| || ||||  |||||||  ||| ||||||||||| ||||||| ||||||| |||||||||||||||||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatc 8046009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 11848179 - 11847984
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttg------gaagataa 110  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||       || || |    
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  111 attgagggttagggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 205  Q
    |||||||||||||||||||||| |||| || || || ||||||| ||||||||||||| || || |||| ||||||| ||||||||||||||||||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatct 11847984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 53483760 - 53483650
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 125  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  126 ttgatgatgatt 137  Q
    ||||||||||||    
T  53483661 ttgatgatgatt 53483650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 15408205 - 15408139
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408205 ttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 111  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  33 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 27906321 - 27906210
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 125  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  126 ttgatgatgatt 137  Q
     ||||| |||||    
T  27906221 gtgatgttgatt 27906210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataa 63  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 30923 - 30730
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattga 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  30923 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattga 30824  T
Q  116 gggttagggtttgatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 208  Q
    || ||||||||||||||||||| ||||||| |||| |||  ||||||||||| | | |||||| || ||||  ||||||||  | |||||||||    
T  30823 ggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgcagaatgaattcctaatctata 30730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 207
Target Start/End: Complemental strand, 18236 - 18043
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattg 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||| |||| ||||||||    
T  18236 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattg 18137  T
Q  115 agggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattct-attgtaatgtaatgtttagaatgaaaacttaatctat 207  Q
    ||||||| ||||| ||||||||| | | ||| |  |||| || |||||||||||||  ||||||||| ||||  ||||||||||||||| ||||    
T  18136 agggttaaggtttaatgatgattctaacgggaaatggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctat 18043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 3624 - 3806
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 127  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  128 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| |||||  |||||||| ||||||||||||||    
T  3723 gatgatgattctgagggggatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactg 3806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 3295 - 3478
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 127  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  128 gatgatgattatgaggggtatgggtattg-atcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 211  Q
    |||||||||| ||||||| ||||||| || |||||||||||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  3394 gatgatgattctgaggggaatgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactg 3478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 1727 - 1841
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 121  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  122 gggtttgatgatgatt 137  Q
    ||||||||||||||||    
T  1826 gggtttgatgatgatt 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 5750 - 5864
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 121  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  122 gggtttgatgatgatt 137  Q
    ||||||||||||||||    
T  5849 gggtttgatgatgatt 5864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 110  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 110  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 45268 - 45384
Alignment:
Q  21 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 119  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  120 tagggtttgatgatgatt 137  Q
    ||||||||||||||||||    
T  45367 tagggtttgatgatgatt 45384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 40521 - 40587
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40521 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 17710 - 17643
Alignment:
Q  17 ttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17710 ttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 135539 - 135473
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135539 ttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 8 - 72
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 22582 - 22646
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 81  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22582 ttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 79  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 115  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  116 g 116  Q
    |    
T  680 g 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 111  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 5522 - 5487
Alignment:
Q  14 ttattctgcaaaactaaggtaagggtgagactatct 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  5522 ttattctgcaaaactaaggtaagggtgagactatct 5487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 1441 - 1378
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaatt 91  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  18 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 99  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  24 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 23559 - 23624
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| |||||||||||||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaatt 23624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 111  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 73337 - 73229
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 128  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  129 atgatgatt 137  Q
    ||| |||||    
T  73237 atgttgatt 73229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 80293 - 80321
Alignment:
Q  14 ttattctgcaaaactaaggtaagggtgag 42  Q
    |||||||||||||||||||||||||||||    
T  80293 ttattctgcaaaactaaggtaagggtgag 80321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 100015 - 100043
Alignment:
Q  14 ttattctgcaaaactaaggtaagggtgag 42  Q
    |||||||||||||||||||||||||||||    
T  100015 ttattctgcaaaactaaggtaagggtgag 100043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University