View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5106_low_19 (Length: 240)
Name: NF5106_low_19
Description: NF5106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5106_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 225
Target Start/End: Original strand, 6269756 - 6269964
Alignment:
| Q |
17 |
cagagattaaaggaggacatatcaaggtagaggaagtggctattgatacaacttcaactgctaagttaatgatgatgagcaacatgtccttcaaagatct |
116 |
Q |
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| T |
6269756 |
cagagattaaaggaggacatatcaaggtagaggaagtggctattgatacaacttcaactgctaagttaatgatgatgagcaacatgtccttcaaagatct |
6269855 |
T |
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| Q |
117 |
tgaaaggttgttagagatgcctccacttcaaatggaagagatgttatggttataaaattatggattaatggatatgtctgtgtaaaagtattttacacaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
6269856 |
tgaaaggttgttagagatgcctccacttcaaatggaagagatgttatggttataaaattatggattaatggatatgtctgtgtaaaagtattttacataa |
6269955 |
T |
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| Q |
217 |
accaattga |
225 |
Q |
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||||||||| |
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| T |
6269956 |
accaattga |
6269964 |
T |
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