View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5107-Insertion-6 (Length: 352)
Name: NF5107-Insertion-6
Description: NF5107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5107-Insertion-6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 7 - 352
Target Start/End: Complemental strand, 25452802 - 25452457
Alignment:
| Q |
7 |
acttacaacatctcctttgttgtgaagatatgtagtatctagtttagcagggtaaacagtatcatcatcgtcatcatctcattcttcaacactagaactt |
106 |
Q |
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| T |
25452802 |
acttacaacatctcctttgttgtgaagatatgtagtatctagtttagcagggtaaacagtatcatcatcgtcatcatctcattcttcaacactagaactt |
25452703 |
T |
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| Q |
107 |
gccacatgccacttgggagaaattggcctaataccttttctcttctgggtacctaaaagtgctgatttttctgtacaagcatcttcttggtgtgaatgga |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25452702 |
gccacatgccacttgggagaaattggcctaataccttttctcttctgcgtacctaaaagtgctgatttttctgtacaagcatcttcttggtgtgaatgga |
25452603 |
T |
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| Q |
207 |
tggtatttggtatactgagtaaaatatgtcagttataccgccagtgaacactcccactgtgtcagtttttggtataaataccaaattttttaactactat |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
25452602 |
tggtatttggtatactgagtaaaatatgtcagttataccgccagtgaacactcccactgtgtcagtttttggtataaataccaaaaattttaactactat |
25452503 |
T |
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| Q |
307 |
agttaatttaggttccatgcccaaaacatttttctgaaccagtcat |
352 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
25452502 |
agttaatttaggttccatgcccaaaacatttttctcaaccagtcat |
25452457 |
T |
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