View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5108-Insertion-2 (Length: 513)
Name: NF5108-Insertion-2
Description: NF5108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5108-Insertion-2 |
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Alignment Details
Target: chr6 (Bit Score: 418; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 8 - 500
Target Start/End: Complemental strand, 182649 - 182161
Alignment:
| Q |
8 |
gtccaaccatcataagagaaaccacttgaagaagatattgtgaagcagttacagctaccattggagctgccacgaaactcactttcttcaactcttgaac |
107 |
Q |
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| T |
182649 |
gtccaaccatcataagagaaaccacttgaagaagatattgtgaaacagttacagctaccattggagctgcaacgaaactcactttcttcaactcttgaac |
182550 |
T |
|
| Q |
108 |
aaatgtactctcaatctcatcat---tctttcttatcaatggtgttgtcacctccttactcatctctctagagttgtttttcattaaatgtgatcactat |
204 |
Q |
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| T |
182549 |
aaatgtactctcaatctcatgatcactctttcttatcaatggtgttgtcacctccttactcatctctctagagttgtttttcattaaatgtgatcactat |
182450 |
T |
|
| Q |
205 |
gaatatgatatcagagatttatatataggagtgaaagagttttttctttcttcttctacctatatggaaagtaagtgtggttaatgttaatatttatggt |
304 |
Q |
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| T |
182449 |
gaatatgatatcagagatttatatataggagtgaaagagttgtttctttcttcttctacctatatggaaagtaagtgtggttaatgttaatatttatggt |
182350 |
T |
|
| Q |
305 |
caaaaaccaagttgcatattatattaataataataaatttaaaattgtgcttctgcacacagaatgagaatgacagaattgaagagtgtgttgtttgtta |
404 |
Q |
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| T |
182349 |
caaaaaccaagttgcatat--------taataataaatttaaaattgtgcttctgcacacagaatgaggatgacagaattgaagagtgtgttgtttgtta |
182258 |
T |
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| Q |
405 |
gttagttgtaatattcaattaatcacgtaccattaaatcattgttctcgacatcaatcata-tttgtacacttcatatttttcaatattcaatcaac |
500 |
Q |
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| T |
182257 |
gttagttgtaatattcaattaatcacgtaccattaaatcattgttgtcgacatcaatgatattttgtacacttcatatttttcaatattcaatcaac |
182161 |
T |
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