View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5108-Insertion-8 (Length: 89)

Name: NF5108-Insertion-8
Description: NF5108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5108-Insertion-8
NF5108-Insertion-8
[»] chr4 (29 HSPs)
chr4 (7-48)||(29175370-29175411)
chr4 (7-47)||(44539879-44539919)
chr4 (7-45)||(39440629-39440667)
chr4 (7-48)||(11068833-11068874)
chr4 (7-48)||(26732370-26732411)
chr4 (7-48)||(51986187-51986228)
chr4 (7-47)||(23369218-23369258)
chr4 (10-45)||(42360292-42360327)
chr4 (8-46)||(27965131-27965169)
chr4 (7-45)||(43175129-43175167)
chr4 (7-45)||(53786103-53786141)
chr4 (7-45)||(53801647-53801685)
chr4 (10-47)||(2268405-2268442)
chr4 (7-48)||(31641450-31641491)
chr4 (7-47)||(37297193-37297233)
chr4 (9-45)||(46634235-46634271)
chr4 (7-42)||(25123178-25123213)
chr4 (7-46)||(26724859-26724898)
chr4 (7-46)||(27050973-27051012)
chr4 (7-46)||(36178051-36178090)
chr4 (7-45)||(15175691-15175729)
chr4 (7-45)||(39606117-39606155)
chr4 (7-47)||(10250401-10250441)
chr4 (11-47)||(26492156-26492192)
chr4 (7-47)||(38382466-38382506)
chr4 (7-39)||(45083117-45083149)
chr4 (7-47)||(47181986-47182026)
chr4 (7-47)||(48402083-48402123)
chr4 (7-42)||(24575742-24575777)
[»] chr2 (22 HSPs)
chr2 (7-48)||(32477477-32477518)
chr2 (7-48)||(42421783-42421824)
chr2 (7-48)||(18254094-18254135)
chr2 (7-48)||(21611540-21611581)
chr2 (7-47)||(1248831-1248871)
chr2 (7-47)||(22888703-22888743)
chr2 (7-46)||(41195729-41195768)
chr2 (7-49)||(9990836-9990878)
chr2 (11-48)||(9194390-9194427)
chr2 (7-48)||(9647277-9647318)
chr2 (7-48)||(9760163-9760204)
chr2 (10-47)||(22416349-22416386)
chr2 (11-47)||(43487528-43487564)
chr2 (7-42)||(6049236-6049271)
chr2 (7-46)||(37737858-37737897)
chr2 (7-45)||(3838768-3838806)
chr2 (9-42)||(10060339-10060372)
chr2 (7-44)||(34944979-34945016)
chr2 (11-48)||(41042403-41042440)
chr2 (7-47)||(2076714-2076754)
chr2 (7-47)||(3097747-3097787)
chr2 (7-47)||(25270468-25270508)
[»] chr5 (21 HSPs)
chr5 (7-50)||(18258676-18258719)
chr5 (7-45)||(7287077-7287115)
chr5 (7-44)||(1764369-1764406)
chr5 (7-47)||(1274502-1274542)
chr5 (7-47)||(1671687-1671727)
chr5 (7-47)||(8687036-8687076)
chr5 (7-47)||(26791130-26791170)
chr5 (7-46)||(5168328-5168367)
chr5 (7-46)||(35634722-35634761)
chr5 (7-45)||(28306020-28306058)
chr5 (7-45)||(33037665-33037703)
chr5 (7-44)||(13168667-13168704)
chr5 (11-48)||(28467338-28467375)
chr5 (11-46)||(1079851-1079886)
chr5 (7-42)||(2972469-2972504)
chr5 (9-48)||(35646518-35646557)
chr5 (7-37)||(7076464-7076494)
chr5 (7-45)||(14923218-14923256)
chr5 (7-45)||(15479614-15479652)
chr5 (14-47)||(36739100-36739133)
chr5 (7-47)||(17626131-17626171)
[»] chr3 (30 HSPs)
chr3 (7-62)||(33939383-33939438)
chr3 (7-48)||(27541387-27541428)
chr3 (8-48)||(44856099-44856139)
chr3 (7-46)||(52939796-52939835)
chr3 (7-46)||(55151604-55151643)
chr3 (7-45)||(13735875-13735913)
chr3 (7-45)||(16969454-16969492)
chr3 (7-45)||(32924169-32924207)
chr3 (8-49)||(31157561-31157602)
chr3 (7-44)||(35597307-35597344)
chr3 (7-48)||(38926773-38926814)
chr3 (7-47)||(52326164-52326204)
chr3 (10-45)||(41505627-41505662)
chr3 (7-42)||(42358529-42358564)
chr3 (11-45)||(7934123-7934157)
chr3 (11-45)||(19149139-19149173)
chr3 (7-45)||(36670902-36670940)
chr3 (7-45)||(37503635-37503673)
chr3 (11-45)||(42356972-42357006)
chr3 (7-45)||(44413283-44413321)
chr3 (7-48)||(7668073-7668114)
chr3 (9-45)||(288873-288909)
chr3 (7-47)||(21217657-21217697)
chr3 (7-47)||(37056943-37056983)
chr3 (7-47)||(44383334-44383374)
chr3 (7-47)||(44813281-44813321)
chr3 (7-47)||(46624052-46624092)
chr3 (7-50)||(37302691-37302734)
chr3 (7-46)||(41309262-41309301)
chr3 (11-46)||(52254025-52254060)
[»] chr1 (30 HSPs)
chr1 (7-46)||(33100953-33100992)
chr1 (7-45)||(44519039-44519077)
chr1 (7-48)||(19055644-19055685)
chr1 (7-47)||(27464943-27464983)
chr1 (7-47)||(31088326-31088366)
chr1 (7-47)||(45121367-45121407)
chr1 (9-48)||(41677221-41677260)
chr1 (7-45)||(8350087-8350125)
chr1 (7-45)||(26469504-26469542)
chr1 (7-45)||(48470784-48470822)
chr1 (7-48)||(649914-649955)
chr1 (10-47)||(29359773-29359810)
chr1 (7-48)||(43775351-43775392)
chr1 (7-48)||(45640446-45640487)
chr1 (5-45)||(15469945-15469985)
chr1 (7-47)||(21401543-21401583)
chr1 (14-45)||(6693297-6693328)
chr1 (7-50)||(23645556-23645599)
chr1 (7-41)||(35369845-35369879)
chr1 (7-45)||(37619689-37619727)
chr1 (11-45)||(44914459-44914493)
chr1 (7-48)||(37274918-37274959)
chr1 (7-39)||(3851303-3851335)
chr1 (7-47)||(9566846-9566886)
chr1 (7-39)||(50932449-50932481)
chr1 (7-46)||(52576188-52576228)
chr1 (10-45)||(3981914-3981949)
chr1 (8-47)||(34974723-34974762)
chr1 (7-46)||(49647038-49647077)
chr1 (14-45)||(50726136-50726167)
[»] chr6 (14 HSPs)
chr6 (7-49)||(33430246-33430288)
chr6 (10-46)||(8098496-8098532)
chr6 (7-46)||(32316815-32316854)
chr6 (7-45)||(552938-552976)
chr6 (7-48)||(15974753-15974794)
chr6 (7-50)||(34047532-34047575)
chr6 (7-45)||(5694039-5694077)
chr6 (11-45)||(13689882-13689916)
chr6 (7-45)||(14818077-14818115)
chr6 (7-45)||(31077939-31077977)
chr6 (7-48)||(26595494-26595535)
chr6 (7-47)||(16199595-16199635)
chr6 (7-46)||(1156865-1156904)
chr6 (14-45)||(5080467-5080498)
[»] chr8 (12 HSPs)
chr8 (7-47)||(27325903-27325943)
chr8 (7-45)||(4054174-4054212)
chr8 (10-47)||(31249422-31249459)
chr8 (7-47)||(12898815-12898855)
chr8 (11-46)||(10731683-10731718)
chr8 (7-46)||(34186752-34186791)
chr8 (6-44)||(10963663-10963701)
chr8 (7-45)||(22719585-22719623)
chr8 (7-48)||(37449310-37449351)
chr8 (7-46)||(24479368-24479407)
chr8 (7-42)||(36816507-36816542)
chr8 (14-45)||(42768356-42768387)
[»] chr7 (12 HSPs)
chr7 (7-46)||(24614203-24614242)
chr7 (7-49)||(3937007-3937049)
chr7 (7-45)||(38956506-38956544)
chr7 (7-48)||(25192802-25192843)
chr7 (10-45)||(38073356-38073391)
chr7 (14-49)||(43942784-43942819)
chr7 (8-46)||(40112841-40112879)
chr7 (7-45)||(41989628-41989666)
chr7 (7-47)||(7701689-7701729)
chr7 (18-46)||(41189428-41189456)
chr7 (7-47)||(46022153-46022193)
chr7 (7-46)||(43025485-43025524)
[»] scaffold0199 (1 HSPs)
scaffold0199 (7-48)||(8813-8854)
[»] scaffold0056 (1 HSPs)
scaffold0056 (7-48)||(76504-76545)
[»] scaffold0098 (1 HSPs)
scaffold0098 (7-45)||(49440-49478)


Alignment Details
Target: chr4 (Bit Score: 42; Significance: 0.000000000000002; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 29175370 - 29175411
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29175370 aaagttgtcacatatatgaatgttcaaataacacaactcttt 29175411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 44539879 - 44539919
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44539879 aaagttgtcacatatatgaatgttcaaataacacaactctt 44539919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 39440629 - 39440667
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39440629 aaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 11068833 - 11068874
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  11068833 aaagttgtcacatatatgaatgttcaaataacacaattcttt 11068874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 26732370 - 26732411
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  26732370 aaagttgtcacatatatggatgttcaaataacacaactcttt 26732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 51986187 - 51986228
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  51986187 aaagttgtcacatatatggatgttcaaataacacaactcttt 51986228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 23369258 - 23369218
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  23369258 aaagttgtcacatatatggatgttcaaataacacaactctt 23369218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 42360292 - 42360327
Alignment:
Q  10 gttgtcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  42360292 gttgtcacatatatgaatgttcaaataacacaactc 42360327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 27965131 - 27965169
Alignment:
Q  8 aagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  27965131 aagttgtcacatatatggatgttcaaataacacaactct 27965169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 43175129 - 43175167
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  43175129 aaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 53786141 - 53786103
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  53786141 aaagttgtcacatatatggatgttcaaataacacaactc 53786103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 53801685 - 53801647
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  53801685 aaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 2268442 - 2268405
Alignment:
Q  10 gttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  2268442 gttgtcacatatatggatgttcaaataacacaactctt 2268405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 31641491 - 31641450
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  31641491 aaagttatcacgtatatgaatgttcaaataacacaactcttt 31641450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 37297193 - 37297233
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  37297193 aaagttgtcaaatatatggatgttcaaataacacaactctt 37297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 46634235 - 46634271
Alignment:
Q  9 agttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||| ||||||||||||||||||||    
T  46634235 agttgtcacatatatggatgttcaaataacacaactc 46634271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 25123213 - 25123178
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaa 42  Q
    |||||||| |||||||||||||||||||||||||||    
T  25123213 aaagttgttacatatatgaatgttcaaataacacaa 25123178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 26724898 - 26724859
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  26724898 aaagttatcacatatatggatgttcaaataacacaactct 26724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 27051012 - 27050973
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  27051012 aaagttgtcacatttatgaatgttcaaataacacatctct 27050973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 36178051 - 36178090
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  36178051 aaagttatcacatatataaatgttcaaataacacaactct 36178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 15175691 - 15175729
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  15175691 aaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 39606117 - 39606155
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  39606117 aaagttgtcacatatataaatgttcaaataatacaactc 39606155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 10250441 - 10250401
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    ||||||||| |||||||| ||||||||||||||||| ||||    
T  10250441 aaagttgtcgcatatatggatgttcaaataacacaattctt 10250401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 26492156 - 26492192
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||  ||||||||||||||||||||||    
T  26492156 ttgtcacatatatagatgttcaaataacacaactctt 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 38382466 - 38382506
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  38382466 aaagttgtcatataaatggatgttcaaataacacaactctt 38382506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 45083117 - 45083149
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataaca 39  Q
    |||||||||||||||||| ||||||||||||||    
T  45083117 aaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 47181986 - 47182026
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  47181986 aaagttgtcatataaatggatgttcaaataacacaactctt 47182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 48402123 - 48402083
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  48402123 aaagttgtcatataaatggatgttcaaataacacaactctt 48402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 24575777 - 24575742
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaa 42  Q
    |||||||||||||||||  |||||||||||||||||    
T  24575777 aaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 32477477 - 32477518
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32477477 aaagttgtcacatatatgaatgttcaaataacacaactcttt 32477518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 42421824 - 42421783
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42421824 aaagttgtcacatatatgaatgttcaaataacacaactcttt 42421783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 18254135 - 18254094
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  18254135 aaagttgtcacatatatggatgttcaaataacacaactcttt 18254094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 21611581 - 21611540
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  21611581 aaagttgtcacatatatggatgttcaaataacacaactcttt 21611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 1248831 - 1248871
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  1248831 aaagttgtcacatatatggatgttcaaataacacaactctt 1248871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 22888743 - 22888703
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  22888743 aaagttgtcacatatatggatgttcaaataacacaactctt 22888703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 41195729 - 41195768
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  41195729 aaagttgttacatatatgaatgttcaaataacacaactct 41195768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 9990836 - 9990878
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctttc 49  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  9990836 aaagttatcacatatatggatgttcaaataacacaactctttc 9990878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 9194390 - 9194427
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||| |||||||||||||||||||||||||||||||||    
T  9194390 ttgttacatatatgaatgttcaaataacacaactcttt 9194427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 9647277 - 9647318
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  9647277 aaagttatcgcatatatgaatgttcaaataacacaactcttt 9647318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 9760163 - 9760204
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  9760163 aaagttgtcacatatatagatgttcaaataacacaactcttt 9760204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 22416349 - 22416386
Alignment:
Q  10 gttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  22416349 gttgtcacatatatggatgttcaaataacacaactctt 22416386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 43487528 - 43487564
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||| ||||||||||||||||||||||    
T  43487528 ttgtcacatatatggatgttcaaataacacaactctt 43487564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 6049271 - 6049236
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaa 42  Q
    |||||||||||||||||| |||||||||||||||||    
T  6049271 aaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 37737897 - 37737858
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  37737897 aaagttgtcacatatatggacgttcaaataacacaactct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 3838806 - 3838768
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  3838806 aaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 10060372 - 10060339
Alignment:
Q  9 agttgtcacatatatgaatgttcaaataacacaa 42  Q
    ||||||||||||||||||||||||||||| ||||    
T  10060372 agttgtcacatatatgaatgttcaaataatacaa 10060339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 34945016 - 34944979
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaact 44  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  34945016 aaagttgtcacatatatgaatattcaattaacacaact 34944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 41042403 - 41042440
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  41042403 ttgtcacatatatggatgttcaaataacagaactcttt 41042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 2076714 - 2076754
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  2076714 aaagttgtcacatctattgatgttcaaataacacaactctt 2076754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 3097787 - 3097747
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  3097787 aaagttgtcatataaatggatgttcaaataacacaactctt 3097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 25270508 - 25270468
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  25270508 aaagttgtcatataaatggatgttcaaataacacaactctt 25270468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 18258719 - 18258676
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctttca 50  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  18258719 aaagttgtcacatatatggatgttcaaataacacaactctttca 18258676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 7287115 - 7287077
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7287115 aaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 1764369 - 1764406
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaact 44  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1764369 aaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 1274502 - 1274542
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  1274502 aaagttgtcacatatatggatgttcaaataacacaactctt 1274542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 1671687 - 1671727
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  1671687 aaagttgtcacatatatggatgttcaaataacacaactctt 1671727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 8687036 - 8687076
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  8687036 aaagttgtcacatatatgaatgttcaaataacactactctt 8687076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 26791170 - 26791130
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  26791170 aaagttgtcacatatatggatgttcaaataacacaactctt 26791130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 5168328 - 5168367
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  5168328 aaagttgtcatatatatgaatgttcaaataacacaactct 5168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 35634761 - 35634722
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  35634761 aaagttgtcacatatatggatgttcaaataacacaactct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 28306058 - 28306020
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28306058 aaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 33037665 - 33037703
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  33037665 aaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 13168667 - 13168704
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaact 44  Q
    |||||||||||||||||||||||| |||||||||||||    
T  13168667 aaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 28467375 - 28467338
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28467375 ttgtcacatatatgaatgttcagataacacaactcttt 28467338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 1079886 - 1079851
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactct 46  Q
    ||||||||| ||||||||||||||||||||||||||    
T  1079886 ttgtcacatttatgaatgttcaaataacacaactct 1079851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 2972469 - 2972504
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaa 42  Q
    ||||||||||||||||| ||||||||||||||||||    
T  2972469 aaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 35646518 - 35646557
Alignment:
Q  9 agttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||| ||||| |||||||||||||||||    
T  35646518 agttgtcacatatatggatgtttaaataacacaactcttt 35646557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 7076494 - 7076464
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataa 37  Q
    |||||||||||||||||||||||||||||||    
T  7076494 aaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 14923218 - 14923256
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  14923218 aaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 15479614 - 15479652
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  15479614 aaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 36739100 - 36739133
Alignment:
Q  14 tcacatatatgaatgttcaaataacacaactctt 47  Q
    ||||||||||| ||||||||||||||||||||||    
T  36739100 tcacatatatggatgttcaaataacacaactctt 36739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 17626131 - 17626171
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  17626131 aaagttgtcatataaatggatgttcaaataacacaactctt 17626171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 33939383 - 33939438
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctttcacaaaacctataa 62  Q
    |||||||||||||||||| |||||||||||||||||||||||  ||||||| ||||    
T  33939383 aaagttgtcacatatatggatgttcaaataacacaactctttagcaaaacccataa 33939438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 27541428 - 27541387
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  27541428 aaagttgtcacatatatggatgttcaaataacacaactcttt 27541387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 44856099 - 44856139
Alignment:
Q  8 aagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  44856099 aagttgtcacatatatggatgttcaaataacacaactcttt 44856139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 52939796 - 52939835
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  52939796 aaagttgtcacatatatggatgttcaaataacacaactct 52939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 55151643 - 55151604
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  55151643 aaagttgtcacatatataaatgttcaaataacacaactct 55151604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 13735875 - 13735913
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13735875 aaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 16969492 - 16969454
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  16969492 aaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 32924207 - 32924169
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  32924207 aaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 31157602 - 31157561
Alignment:
Q  8 aagttgtcacatatatgaatgttcaaataacacaactctttc 49  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  31157602 aagttatcacatatatggatgttcaaataacacaactctttc 31157561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 35597307 - 35597344
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaact 44  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  35597307 aaagttgtcacatatatgaatattcaaataacacaact 35597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 38926773 - 38926814
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  38926773 aaagttgtcacatatatagatgttcaaataacacaactcttt 38926814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 52326164 - 52326204
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  52326164 aaagttgtcatatatatggatgttcaaataacacaactctt 52326204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 41505627 - 41505662
Alignment:
Q  10 gttgtcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||||||| ||||||||||||||||||||    
T  41505627 gttgtcacatatatggatgttcaaataacacaactc 41505662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 42358564 - 42358529
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaa 42  Q
    |||||||||||||||||| |||||||||||||||||    
T  42358564 aaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 7934123 - 7934157
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||| ||||||||||||||||||||    
T  7934123 ttgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 19149139 - 19149173
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||| ||||||||||||||||||||    
T  19149139 ttgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 36670940 - 36670902
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  36670940 aaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 37503673 - 37503635
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  37503673 aaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 42357006 - 42356972
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||| ||||||||||||||||||||    
T  42357006 ttgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 44413321 - 44413283
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  44413321 aaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 7668114 - 7668073
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    ||||||||||||| |||| ||||||||||||||||| |||||    
T  7668114 aaagttgtcacatgtatggatgttcaaataacacaattcttt 7668073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 288873 - 288909
Alignment:
Q  9 agttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||| || |||||||||||||||||    
T  288873 agttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 21217657 - 21217697
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  21217657 aaagttgtcatataaatggatgttcaaataacacaactctt 21217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 37056983 - 37056943
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  37056983 aaagttgtcatataaatggatgttcaaataacacaactctt 37056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 44383334 - 44383374
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  44383334 aaagttgtcatataaatggatgttcaaataacacaactctt 44383374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 44813281 - 44813321
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||  |||||||||| |||||||||||    
T  44813281 aaagttgtcacatatatagatgttcaaatcacacaactctt 44813321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 46624052 - 46624092
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||| |||||| |||| ||||||||||||||||||||||    
T  46624052 aaagttatcacatgtatggatgttcaaataacacaactctt 46624092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 37302691 - 37302734
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctttca 50  Q
    |||||||||| || |||| |||||||||||| ||||||||||||    
T  37302691 aaagttgtcaaatgtatggatgttcaaataagacaactctttca 37302734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 41309262 - 41309301
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||| || |||||||| |||||||||||||||||||||    
T  41309262 aaagttatcgcatatatggatgttcaaataacacaactct 41309301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 52254060 - 52254025
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||||||||| |||||||||| ||||||||||    
T  52254060 ttgtcacatatatggatgttcaaatgacacaactct 52254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 33100953 - 33100992
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33100953 aaagttgtcacatatatgaatgttcaaataacacaactct 33100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 44519077 - 44519039
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44519077 aaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 19055685 - 19055644
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  19055685 aaagttgtcacatatatggatgttcaaataacacaactcttt 19055644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 27464983 - 27464943
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  27464983 aaagttgtcacatatatggatgttcaaataacacaactctt 27464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 31088326 - 31088366
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  31088326 aaagttgtcacatatatggatgttcaaataacacaactctt 31088366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 45121407 - 45121367
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  45121407 aaagttgtcacatatatggatgttcaaataacacaactctt 45121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 41677260 - 41677221
Alignment:
Q  9 agttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  41677260 agttgtcacatatatggatgttcaaataacacaactcttt 41677221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 8350125 - 8350087
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  8350125 aaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 26469504 - 26469542
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  26469504 aaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 48470784 - 48470822
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  48470784 aaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 649914 - 649955
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  649914 aaagttgtcacatatgtggatgttcaaataacacaactcttt 649955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 29359773 - 29359810
Alignment:
Q  10 gttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29359773 gttgtcatatatatgaatgttcaaataacacaactctt 29359810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 43775351 - 43775392
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  43775351 aaagttgtcacatatatgaatattcaaataacacaagtcttt 43775392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 45640446 - 45640487
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  45640446 aaagttgtcacatatatagatgttcaaataacacaactcttt 45640487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 15469985 - 15469945
Alignment:
Q  5 acaaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  15469985 acaaaattatcacatatatgaatgttcaaataacacaactc 15469945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 21401543 - 21401583
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  21401543 aaagttgtcacataaatggatgttcaaataacacaactctt 21401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 6693297 - 6693328
Alignment:
Q  14 tcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||||||||||||||||||||||||    
T  6693297 tcacatatatgaatgttcaaataacacaactc 6693328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 23645556 - 23645599
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctttca 50  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||    
T  23645556 aaagttgttacatatatgtatgttcaaataacataactctttca 23645599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 35369845 - 35369879
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacaca 41  Q
    |||||||||||||||||| ||||||||||||||||    
T  35369845 aaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 37619689 - 37619727
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  37619689 aaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 44914493 - 44914459
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||| ||||||||||||||||||||    
T  44914493 ttgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 37274959 - 37274918
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    ||||||||||||| || | |||||||||||||||||||||||    
T  37274959 aaagttgtcacatgtaaggatgttcaaataacacaactcttt 37274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 3851303 - 3851335
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataaca 39  Q
    |||||||||||||||||| ||||||||||||||    
T  3851303 aaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 9566886 - 9566846
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| |||  |||||||||||||||||||||||||    
T  9566886 aaagttgtcatataattgaatgttcaaataacacaactctt 9566846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 50932449 - 50932481
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataaca 39  Q
    |||||||||||||||||| ||||||||||||||    
T  50932449 aaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 52576228 - 52576188
Alignment:
Q  7 aaagttgtcacatatatgaat-gttcaaataacacaactct 46  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  52576228 aaagttgtcacctatatgaattgttcaaataacacaactct 52576188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 3981949 - 3981914
Alignment:
Q  10 gttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||| |||| ||||||||||||||||||||    
T  3981949 gttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 34974762 - 34974723
Alignment:
Q  8 aagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    ||||||||||||| |||| ||||||||||||||| |||||    
T  34974762 aagttgtcacataaatgattgttcaaataacacacctctt 34974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 49647077 - 49647038
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||||| ||| |||||||||||||||||| ||||||    
T  49647077 aaagttgtcatataaatgaatgttcaaataacataactct 49647038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 45
Target Start/End: Complemental strand, 50726167 - 50726136
Alignment:
Q  14 tcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||| ||||||||||||||||||||    
T  50726167 tcacatatatggatgttcaaataacacaactc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 33430288 - 33430246
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctttc 49  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  33430288 aaagttgtcacatatatgaatgtccaaataacacaactctttc 33430246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 8098532 - 8098496
Alignment:
Q  10 gttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||||||||||||||||||||||||||||||||    
T  8098532 gttgtcacatatatgaatgttcaaataacacaactct 8098496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 32316854 - 32316815
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  32316854 aaagttgtcacatatatggatgttcaaataacacaactct 32316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 552938 - 552976
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  552938 aaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 15974753 - 15974794
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  15974753 aaagttgttacatatatggatgttcaaataacacaactcttt 15974794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 34047532 - 34047575
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctttca 50  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||    
T  34047532 aaagttgtcacatttatggatgttcaaataacaaaactctttca 34047575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 5694077 - 5694039
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  5694077 aaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 13689916 - 13689882
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||| ||||||||||||||||||||    
T  13689916 ttgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 14818077 - 14818115
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  14818077 aaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 31077939 - 31077977
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  31077939 aaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 26595494 - 26595535
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||| ||| ||| |||||||||||||||||||||||    
T  26595494 aaagttgtcatataaatggatgttcaaataacacaactcttt 26595535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 16199595 - 16199635
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  16199595 aaagttgtcatataaatggatgttcaaataacacaactctt 16199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 1156865 - 1156904
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||| ||| ||||||| |||||||||||||||||||||    
T  1156865 aaagttatcaaatatatggatgttcaaataacacaactct 1156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 45
Target Start/End: Complemental strand, 5080498 - 5080467
Alignment:
Q  14 tcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||| ||||||||||||||||||||    
T  5080498 tcacatatatggatgttcaaataacacaactc 5080467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000002; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 27325903 - 27325943
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  27325903 aaagttgtcacatatatggatgttcaaataacacaactctt 27325943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 4054212 - 4054174
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  4054212 aaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 31249459 - 31249422
Alignment:
Q  10 gttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  31249459 gttgtcacatatatggatgttcaaataacacaactctt 31249422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 12898855 - 12898815
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  12898855 aaagttgtcacatatatggatgttcaaataacataactctt 12898815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 10731683 - 10731718
Alignment:
Q  11 ttgtcacatatatgaatgttcaaataacacaactct 46  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10731683 ttgtcacatatatcaatgttcaaataacacaactct 10731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 34186752 - 34186791
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  34186752 aaagttgtcacatgtatggatgttcaaataacacaactct 34186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 10963701 - 10963663
Alignment:
Q  6 caaagttgtcacatatatgaatgttcaaataacacaact 44  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  10963701 caaagttgtcgcatatattaatgttcaaataacacaact 10963663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 22719585 - 22719623
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  22719585 aaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 37449351 - 37449310
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||| ||||||||||| || ||||||||||||||||||||    
T  37449351 aaagttatcacatatatggatattcaaataacacaactcttt 37449310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 24479368 - 24479407
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||| ||| ||||||||||| |||||||||||||||||    
T  24479368 aaagttatcatatatatgaatgctcaaataacacaactct 24479407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 36816542 - 36816507
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaa 42  Q
    |||||||||||||||||  |||||||||||||||||    
T  36816542 aaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 42768356 - 42768387
Alignment:
Q  14 tcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||| ||||||||||||||||||||    
T  42768356 tcacatatatggatgttcaaataacacaactc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.000000000007; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 24614242 - 24614203
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  24614242 aaagttatcacatatatgaatgttcaaataacacaactct 24614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 3937049 - 3937007
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctttc 49  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  3937049 aaagttgtcacatgtatggatgttcaaataacacaactctttc 3937007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 38956544 - 38956506
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  38956544 aaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 25192843 - 25192802
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  25192843 aaagttgtcacatgtatgaatattcaaataacacaactcttt 25192802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 38073356 - 38073391
Alignment:
Q  10 gttgtcacatatatgaatgttcaaataacacaactc 45  Q
    ||||||||||||||| ||||||||||||||||||||    
T  38073356 gttgtcacatatatggatgttcaaataacacaactc 38073391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 43942784 - 43942819
Alignment:
Q  14 tcacatatatgaatgttcaaataacacaactctttc 49  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43942784 tcacatatatggatgttcaaataacacaactctttc 43942819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 40112879 - 40112841
Alignment:
Q  8 aagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  40112879 aagttgttacatatatggatgttcaaataacacaactct 40112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 41989666 - 41989628
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  41989666 aaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 7701689 - 7701729
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  7701689 aaagttgtcatataaatggatgttcaaataacacaactctt 7701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 41189456 - 41189428
Alignment:
Q  18 atatatgaatgttcaaataacacaactct 46  Q
    |||||||||||||||||||||||||||||    
T  41189456 atatatgaatgttcaaataacacaactct 41189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 46022193 - 46022153
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactctt 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  46022193 aaagttgtcatataaatggatgttcaaataacacaactctt 46022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 43025485 - 43025524
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactct 46  Q
    |||||||||||||||||  |||||| ||||||||||||||    
T  43025485 aaagttgtcacatatatagatgttcgaataacacaactct 43025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 34; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 8813 - 8854
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  8813 aaagttgtcagatatatggatgttcaaataacacaactcttt 8854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 76545 - 76504
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactcttt 48  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  76545 aaagttgtcacatatatggatgttaaaataacacaactcttt 76504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 49440 - 49478
Alignment:
Q  7 aaagttgtcacatatatgaatgttcaaataacacaactc 45  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  49440 aaagttgtcacatatatggatgttcaaataacataactc 49478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University