View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5110-Insertion-10 (Length: 95)
Name: NF5110-Insertion-10
Description: NF5110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5110-Insertion-10 |
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Alignment Details
Target: chr6 (Bit Score: 33; Significance: 0.0000000005; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 16415224 - 16415192
Alignment:
| Q |
4 |
aacaaaaccacaccacatgagtcatgacacaca |
36 |
Q |
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| T |
16415224 |
aacaaaaccacaccacatgagtcatgacacaca |
16415192 |
T |
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Target: chr6; HSP #2
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 95
Target Start/End: Complemental strand, 16415158 - 16415131
Alignment:
| Q |
68 |
aatattcattcatacatactttccattc |
95 |
Q |
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| T |
16415158 |
aatattcattcatacatactttccattc |
16415131 |
T |
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