View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5110-Insertion-14 (Length: 486)
Name: NF5110-Insertion-14
Description: NF5110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5110-Insertion-14 |
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Alignment Details
Target: chr5 (Bit Score: 451; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 12 - 474
Target Start/End: Complemental strand, 43128608 - 43128147
Alignment:
| Q |
12 |
tagcatagcataatatgctttttctaatttaagatgcaacaatagcatctaaagattccaaaaaatcgaacaaccatgtgaaaaaagctaagttaaagca |
111 |
Q |
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| T |
43128608 |
tagcatagcataatatgctttttctaatttaagatgcaacaatagcatctaaagattccaaaaaatcgaacaaccatgtgaaaaaagccaagttaaagca |
43128509 |
T |
|
| Q |
112 |
tagatatatagattcttgtttaaccctttagaaattgtacaagtagctccagctagcatttcattaattccactcaactaactttaccgtggcctctctc |
211 |
Q |
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| T |
43128508 |
tagatatatagattcttgtttaaccctttagaaattgtacaagtagctccagctagcatttcattaattccactcaactaactttaccgtggcctctctc |
43128409 |
T |
|
| Q |
212 |
atatcaaaatctcctaagtatcttttcttcccatgtggtttgttttaggtttctaataaaaggagtgagtgagcataataataggtactagttgattgat |
311 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43128408 |
atatcaaaatctcctaagtatcttttcttcccatgt-gtttgttttaggtttctaataaaaggagtgagtgagcataataataggtactagttgattgat |
43128310 |
T |
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| Q |
312 |
catgtcttaatccactaaagtttgtgagagcaaattatggaggaagtgggcattaccttttaaccatccaatcaatgataacaaactcaaagtaaatcag |
411 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43128309 |
catgtcttaatccactaaagtttgtgagagcaaattatggaggaagtgggcattaccttttaaccatccaatcaatgataacaaactcaaagtaaatcag |
43128210 |
T |
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| Q |
412 |
ttggtaaactattcttaattgtctcttagttccttaattcttgctaggtgtcaactaaacatt |
474 |
Q |
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| T |
43128209 |
ttggtaaactattcttaattgtctcttagttccttaattcttgctaggtgtcaactaaacatt |
43128147 |
T |
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