View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5110-Insertion-18 (Length: 154)
Name: NF5110-Insertion-18
Description: NF5110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5110-Insertion-18 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 24295500 - 24295353
Alignment:
| Q |
8 |
agttgcgtggcccgcaggctcatttagggttagtatatgagagttgaacctacgtc-ttgcaggtaaaagtcaatttcttactaattggtttgcattttg |
106 |
Q |
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| T |
24295500 |
agttgcgtggcccgcaggctcatttagggttagtatacgagagttgaacctacgtccttgccggtaaaagtcaatttcttactaattggtttgcgttttg |
24295401 |
T |
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| Q |
107 |
ttgataatttgtaaatttgtaattgtctccgtgcgatttatgtcaatc |
154 |
Q |
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| T |
24295400 |
ttgataatttgtaaatttgtaattgtctccgtgcgatttatgtcaatc |
24295353 |
T |
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