View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5110_high_1 (Length: 834)

Name: NF5110_high_1
Description: NF5110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5110_high_1
NF5110_high_1
[»] chr1 (16 HSPs)
chr1 (277-658)||(32569421-32569802)
chr1 (133-291)||(32575342-32575502)
chr1 (668-786)||(9521938-9522057)
chr1 (669-786)||(2232807-2232926)
chr1 (668-786)||(9526679-9526797)
chr1 (667-786)||(2393131-2393253)
chr1 (668-771)||(21353196-21353301)
chr1 (277-493)||(32614466-32614680)
chr1 (668-786)||(2401073-2401194)
chr1 (664-774)||(25134293-25134404)
chr1 (675-786)||(4144543-4144660)
chr1 (668-721)||(25860251-25860306)
chr1 (112-173)||(32570356-32570416)
chr1 (692-746)||(9314522-9314574)
chr1 (669-721)||(13215465-13215518)
chr1 (668-749)||(3090959-3091039)
[»] chr8 (23 HSPs)
chr8 (668-786)||(28895715-28895833)
chr8 (668-786)||(28890978-28891096)
chr8 (672-786)||(4812336-4812451)
chr8 (668-786)||(16757109-16757229)
chr8 (669-786)||(16752374-16752493)
chr8 (668-786)||(28328120-28328240)
chr8 (669-786)||(28332843-28332962)
chr8 (669-786)||(23179410-23179531)
chr8 (669-786)||(25684853-25684972)
chr8 (668-786)||(9020956-9021079)
chr8 (669-767)||(29554705-29554803)
chr8 (669-786)||(3276504-3276626)
chr8 (669-786)||(591005-591126)
chr8 (667-771)||(17799276-17799381)
chr8 (687-766)||(21034100-21034181)
chr8 (669-786)||(26268084-26268207)
chr8 (668-740)||(4823550-4823622)
chr8 (669-786)||(30423420-30423541)
chr8 (681-771)||(33032879-33032971)
chr8 (671-723)||(28228790-28228842)
chr8 (667-721)||(3874435-3874489)
chr8 (668-772)||(2266935-2267039)
chr8 (669-721)||(28251410-28251463)
[»] scaffold0006 (1 HSPs)
scaffold0006 (669-786)||(231328-231445)
[»] chr7 (23 HSPs)
chr7 (668-786)||(25405627-25405746)
chr7 (668-786)||(7070008-7070127)
chr7 (669-786)||(8378357-8378473)
chr7 (669-786)||(3319869-3319988)
chr7 (669-786)||(7075009-7075127)
chr7 (668-786)||(25351561-25351684)
chr7 (668-786)||(3324636-3324756)
chr7 (668-786)||(15540843-15540963)
chr7 (669-772)||(30247198-30247303)
chr7 (668-785)||(2075320-2075437)
chr7 (668-772)||(7464364-7464469)
chr7 (669-786)||(44143722-44143843)
chr7 (671-772)||(34546734-34546835)
chr7 (668-771)||(44016513-44016618)
chr7 (668-771)||(25357274-25357379)
chr7 (669-771)||(2121128-2121229)
chr7 (668-786)||(44010602-44010726)
chr7 (671-771)||(25410361-25410463)
chr7 (668-771)||(42006888-42006993)
chr7 (671-751)||(21369888-21369970)
chr7 (667-727)||(44512361-44512423)
chr7 (668-721)||(24748981-24749036)
chr7 (668-721)||(443989-444045)
[»] chr3 (31 HSPs)
chr3 (668-786)||(6303524-6303643)
chr3 (668-786)||(10099923-10100042)
chr3 (669-786)||(10093923-10094041)
chr3 (669-786)||(10200805-10200923)
chr3 (669-786)||(54193439-54193557)
chr3 (669-785)||(27544504-27544619)
chr3 (668-786)||(54188723-54188842)
chr3 (668-786)||(22625828-22625947)
chr3 (668-786)||(10897214-10897337)
chr3 (667-786)||(11079724-11079847)
chr3 (669-786)||(5858753-5858874)
chr3 (667-771)||(29897525-29897631)
chr3 (669-786)||(10594883-10595006)
chr3 (668-786)||(47882737-47882859)
chr3 (669-773)||(10949115-10949219)
chr3 (668-773)||(20031169-20031276)
chr3 (668-771)||(29913804-29913908)
chr3 (675-786)||(47878033-47878147)
chr3 (669-786)||(3330098-3330221)
chr3 (668-766)||(10612626-10612725)
chr3 (669-772)||(4535842-4535946)
chr3 (668-786)||(27761839-27761962)
chr3 (669-774)||(48390152-48390260)
chr3 (701-786)||(16462406-16462495)
chr3 (669-761)||(38003103-38003195)
chr3 (681-751)||(7418306-7418378)
chr3 (670-771)||(13893686-13893789)
chr3 (668-727)||(27420998-27421056)
chr3 (669-727)||(16997150-16997209)
chr3 (668-721)||(36871148-36871202)
chr3 (667-728)||(14634289-14634350)
[»] scaffold0131 (1 HSPs)
scaffold0131 (669-786)||(17706-17824)
[»] chr6 (25 HSPs)
chr6 (669-786)||(31248544-31248662)
chr6 (669-786)||(13883687-13883806)
chr6 (669-786)||(30987356-30987473)
chr6 (668-786)||(13878951-13879071)
chr6 (668-786)||(35201156-35201274)
chr6 (668-786)||(16786147-16786265)
chr6 (669-786)||(3577338-3577460)
chr6 (668-786)||(25941878-25942001)
chr6 (669-772)||(25465754-25465858)
chr6 (667-786)||(26887075-26887195)
chr6 (668-766)||(17694700-17694799)
chr6 (686-786)||(17038449-17038550)
chr6 (667-771)||(33216055-33216161)
chr6 (668-786)||(22351703-22351826)
chr6 (668-786)||(22342651-22342774)
chr6 (681-771)||(12166010-12166102)
chr6 (669-771)||(13467318-13467422)
chr6 (667-771)||(19701755-19701860)
chr6 (687-771)||(26643399-26643483)
chr6 (687-771)||(26749365-26749449)
chr6 (668-746)||(5165692-5165772)
chr6 (671-786)||(17066057-17066179)
chr6 (668-721)||(10584359-10584414)
chr6 (713-746)||(5165772-5165805)
chr6 (669-721)||(5273055-5273108)
[»] chr4 (28 HSPs)
chr4 (669-786)||(15831360-15831478)
chr4 (668-786)||(11853778-11853898)
chr4 (668-786)||(15312526-15312650)
chr4 (667-786)||(18587176-18587300)
chr4 (667-786)||(16688792-16688916)
chr4 (667-786)||(7050123-7050246)
chr4 (668-769)||(4570320-4570421)
chr4 (669-786)||(4555915-4556036)
chr4 (668-766)||(8529502-8529601)
chr4 (668-786)||(4558516-4558640)
chr4 (669-786)||(15317167-15317290)
chr4 (669-766)||(16489583-16489681)
chr4 (668-786)||(55822472-55822592)
chr4 (668-770)||(4885100-4885203)
chr4 (668-771)||(47566717-47566822)
chr4 (669-771)||(36771621-36771725)
chr4 (674-771)||(36769704-36769803)
chr4 (668-723)||(31300677-31300733)
chr4 (669-744)||(4874336-4874410)
chr4 (738-786)||(31300629-31300681)
chr4 (669-723)||(32273806-32273860)
chr4 (669-772)||(25613810-25613915)
chr4 (669-721)||(47563194-47563248)
chr4 (668-727)||(16185685-16185746)
chr4 (668-749)||(16639075-16639155)
chr4 (668-756)||(16631425-16631512)
chr4 (669-721)||(18709003-18709056)
chr4 (669-721)||(40637513-40637566)
[»] scaffold1050 (1 HSPs)
scaffold1050 (667-786)||(2917-3037)
[»] chr2 (21 HSPs)
chr2 (668-786)||(2736417-2736537)
chr2 (668-786)||(45679935-45680055)
chr2 (669-772)||(27517491-27517594)
chr2 (668-786)||(22717082-22717204)
chr2 (669-786)||(22712374-22712495)
chr2 (669-786)||(33670817-33670936)
chr2 (668-786)||(39680257-39680378)
chr2 (664-786)||(39687201-39687326)
chr2 (681-786)||(2741153-2741260)
chr2 (671-772)||(12781075-12781177)
chr2 (668-772)||(38191242-38191346)
chr2 (669-784)||(17943747-17943867)
chr2 (668-786)||(17462650-17462768)
chr2 (668-786)||(20054609-20054735)
chr2 (669-786)||(20049866-20049991)
chr2 (668-786)||(37170606-37170729)
chr2 (671-786)||(30479203-30479322)
chr2 (668-723)||(28458692-28458751)
chr2 (667-721)||(22287179-22287234)
chr2 (667-721)||(42923291-42923346)
chr2 (667-721)||(42923349-42923404)
[»] chr5 (21 HSPs)
chr5 (669-786)||(2297849-2297965)
chr5 (669-786)||(22673042-22673163)
chr5 (668-786)||(35385302-35385421)
chr5 (669-786)||(1171024-1171142)
chr5 (668-786)||(42238466-42238589)
chr5 (669-766)||(1240662-1240760)
chr5 (691-786)||(25452705-25452802)
chr5 (671-772)||(28786626-28786728)
chr5 (691-786)||(25445706-25445803)
chr5 (668-771)||(40222993-40223098)
chr5 (669-771)||(11962287-11962390)
chr5 (675-772)||(17841110-17841207)
chr5 (669-771)||(20437145-20437249)
chr5 (669-771)||(16093144-16093249)
chr5 (668-751)||(10627611-10627696)
chr5 (668-772)||(31782310-31782413)
chr5 (668-721)||(37705625-37705680)
chr5 (673-721)||(17818338-17818388)
chr5 (667-728)||(34033420-34033479)
chr5 (669-721)||(10528937-10528990)
chr5 (687-751)||(26406340-26406402)
[»] scaffold0256 (1 HSPs)
scaffold0256 (668-786)||(16540-16657)
[»] scaffold0209 (1 HSPs)
scaffold0209 (668-748)||(16884-16965)
[»] scaffold0267 (1 HSPs)
scaffold0267 (669-721)||(421-473)


Alignment Details
Target: chr1 (Bit Score: 169; Significance: 3e-90; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 277 - 658
Target Start/End: Complemental strand, 32569802 - 32569421
Alignment:
Q  277 tgtgaactctgtcttcattactcaaaa-ctattcgagcaaagagtgaaactcgttcagacattcatcttcccaacaagcggtaaatcatcgtcagaaatc 375  Q
    ||||||||| |||| |||||||| | | ||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| |||| ||||    
T  32569802 tgtgaactcggtctccattactcgacagctattcgagcaaagagtgaaactcgttgatacattcatcttcccaacaagcggcaaatcatcatcagcaatc 32569703  T
Q  376 tcacgaccctttcgactgcccttgtttaggtgaaactggtatacatagtccaaagtctaatcatctgttgagcttactaccttcctcaattttgctatgt 475  Q
    |||||||||||  |||| |||||||||| ||||||||| || |||||||| |||| || ||||||||||||   ||||||||||||||||||||| | ||    
T  32569702 tcacgacccttctgacttcccttgtttaagtgaaactgatacacatagtcaaaagccttatcatctgttgactctactaccttcctcaattttgccacgt 32569603  T
Q  476 aaacctttttgtgatcgtccacagnnnnnnntaaaatgaggaaaccctcgcttccataatcatcggatcattccctgtgataaagtagaagttgaagaca 575  Q
    |||||| ||| ||||||||| |||       |||||||||| |||||||||||||||   ||| ||||||| ||||| ||||||||||| ||||||||||    
T  32569602 aaacctctttctgatcgtccgcag-aaaaaataaaatgaggtaaccctcgcttccatgtacattggatcataccctgagataaagtagaggttgaagaca 32569504  T
Q  576 tccaatcagaaaaactagaggtggcgctacaagtggaagcaagcctttaatggacagggatgaattcatagttatgattttgc 658  Q
    |||||||||||  | |||||||||||||| |||||||||||||||||| ||||||||| ||| |  | || ||||||||||||    
T  32569503 tccaatcagaactagtagaggtggcgctagaagtggaagcaagccttttatggacaggaatggacccgtaattatgattttgc 32569421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 133 - 291
Target Start/End: Complemental strand, 32575502 - 32575342
Alignment:
Q  133 tgagtaactaaataaactgacaagcactcagccttttgtatggcttgtttatatttttctaaaatata--ctgtaaaatactgtaagtggacatccctca 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  32575502 tgagtaactaaataaactgacaagcactcagccttttgtatggcttgtttatatttttctaaaatatagacggtaaaatactgtaagtggacatccctca 32575403  T
Q  231 tcccaaccaccacagtcaccatttctagttctaggcccaccatttctgtgaactctgtctt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32575402 tcccaaccaccacagtcaccatttctagttctaggcccaccatttctgtgaactctgtctt 32575342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 9522057 - 9521938
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9522057 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 9521958  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||||||||||||||||||    
T  9521957 caaaaacagcaagagataaa 9521938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 2232926 - 2232807
Alignment:
Q  669 tgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2232926 tgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgtgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 2232827  T
Q  767 caaaaacagcaagagataaa 786  Q
    |||||||| |||||||||||    
T  2232826 caaaaacaacaagagataaa 2232807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 9526797 - 9526679
Alignment:
Q  668 ttgttgtgaattcgttgagaaaac-cacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9526797 ttgttgtgaattcgttgagaaaaatcacaccaataaaacttgatgtgtggagcaaattaataacaagtaatcaaatcaagcgggtagcaaataatccaaa 9526698  T
Q  767 caaaaacagcaagagataaa 786  Q
    | ||||||||||||||||||    
T  9526697 c-aaaacagcaagagataaa 9526679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 667 - 786
Target Start/End: Original strand, 2393131 - 2393253
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||    
T  2393131 tttgttgtgaattcgttgtgaaaaccacaccaataaaactttatgcgtggagcaaattaataccaagtaatcaaatcaagtggatagcaattaatccaaa 2393230  T
Q  767 caa---aaacagcaagagataaa 786  Q
    |||   |||||||||||||||||    
T  2393231 caaagtaaacagcaagagataaa 2393253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 668 - 771
Target Start/End: Original strand, 21353196 - 21353301
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  21353196 ttgttatgaattcgttgagaaaaccacaccaataacaaacttgatgcgtggagcaaattaatactaagtaattaaatcaagtgggtagcaaataatccaa 21353295  T
Q  766 acaaaa 771  Q
    ||||||    
T  21353296 acaaaa 21353301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 277 - 493
Target Start/End: Complemental strand, 32614680 - 32614466
Alignment:
Q  277 tgtgaactctgtcttcattactcaa-aactattcgagcaaagagtgaaactcgttcagacattcatcttcccaacaagcggtaaatcatcgtcagaaatc 375  Q
    |||||||||||||| |||||||| | ||||||||||||||| ||||||||||||| | ||||||||||||| |||| |||| ||||||||||||| ||||    
T  32614680 tgtgaactctgtctccattactcgacaactattcgagcaaaaagtgaaactcgttgatacattcatcttcctaacaggcggcaaatcatcgtcagcaatc 32614581  T
Q  376 tcacgaccctttcgactgcccttgtttaggtgaaactggtatacatagtccaaagtctaatcatctgttgagcttactaccttcctcaattttgctatgt 475  Q
    |||||||| ||||   ||||| |||||| ||||| |||  ||||| ||||||||  || ||||| ||| |||  || || ||||||||| ||||||||||    
T  32614580 tcacgaccatttcttttgccc-tgtttaagtgaagctg--atacacagtccaaaaccttatcatatgtcgagtctaatatcttcctcaactttgctatgt 32614484  T
Q  476 aaacctttttgtgatcgt 493  Q
    |||||| ||| |||||||    
T  32614483 aaacctctttctgatcgt 32614466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 2401073 - 2401194
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || || ||| ||||||||||    
T  2401073 ttgttgtgaattcgttgtgaaaatcacacaaataaaacttgatgcgtagagcaaattaataccaagtaatcaaatcaagtggataacaattaatccaaac 2401172  T
Q  768 aa---aaacagcaagagataaa 786  Q
    ||   ||||| |||||||||||    
T  2401173 aaagtaaacaacaagagataaa 2401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 664 - 774
Target Start/End: Complemental strand, 25134404 - 25134293
Alignment:
Q  664 gtgtttgttgtgaattcgttgagaaaaccacaccaataaaactt-gatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatc 762  Q
    ||||||||||||||||||||| ||||||||||||||||||| || |||||||| || ||||||||| ||| |||||||||||||||||||| |||||||     
T  25134404 gtgtttgttgtgaattcgttgtgaaaaccacaccaataaaaatttgatgcgtgaagtaaattaatatcaaataatcaaatcaagcgggtagtaaataatt 25134305  T
Q  763 caaacaaaaaca 774  Q
    ||||||||||||    
T  25134304 caaacaaaaaca 25134293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 675 - 786
Target Start/End: Original strand, 4144543 - 4144660
Alignment:
Q  675 gaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa--- 769  Q
    |||||||||| ||||||||||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||       
T  4144543 gaattcgttgtgaaaaccacaccaataataatcttgatacgtggagcaaattaataccaagtaatcaaatcaagcggatagcaaataattcaaacaaaag 4144642  T
Q  770 -aaacagcaagagataaa 786  Q
     |||||||||||||||||    
T  4144643 taaacagcaagagataaa 4144660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 668 - 721
Target Start/End: Original strand, 25860251 - 25860306
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||| |||||||||    
T  25860251 ttgttgtgaattcgttgtgaaaaccacaccaatatcaaacttgatgtgtggagcaa 25860306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 32570416 - 32570356
Alignment:
Q  112 aatatgagatataaacaaacatgagtaactaaataaactgacaagcactcagccttttgtat 173  Q
    ||||||||||| |||||||| |||||||||| || |||||||| |||||| |||||||||||    
T  32570416 aatatgagatacaaacaaacctgagtaactagatcaactgacatgcactc-gccttttgtat 32570356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 746
Target Start/End: Original strand, 9314522 - 9314574
Alignment:
Q  692 cacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaag 746  Q
    |||||||||||||||||||| |||||||||||  | || ||||||||||||||||    
T  9314522 cacaccaataaaacttgatgtgtggagcaaat--aaacaaagtaatcaaatcaag 9314574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 721
Target Start/End: Complemental strand, 13215518 - 13215465
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    |||||||||||||||||||||| ||||||||||  |||||||||| |||||||||    
T  13215518 tgttgtgaattcgttgagaaaa-cacaccaataataaacttgatgtgtggagcaa 13215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 749
Target Start/End: Original strand, 3090959 - 3091039
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttg-atgcgtggagcaaattaataccaagtaatcaaatcaagcgg 749  Q
    |||||||||||||||||  ||||| |||||||||||| ||  ||| ||||||||||| || |||||| |||||||||||||||    
T  3090959 ttgttgtgaattcgttgcaaaaac-acaccaataaaaatttcatgtgtggagcaaataaa-accaagaaatcaaatcaagcgg 3091039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 28895833 - 28895715
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28895833 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 28895734  T
Q  768 aaaaacagcaagagataaa 786  Q
    |||||||||||||||||||    
T  28895733 aaaaacagcaagagataaa 28895715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 28891096 - 28890978
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28891096 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 28890997  T
Q  768 aaaaacagcaagagataaa 786  Q
    ||||||||||| |||||||    
T  28890996 aaaaacagcaacagataaa 28890978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 672 - 786
Target Start/End: Original strand, 4812336 - 4812451
Alignment:
Q  672 tgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaa 770  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4812336 tgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaa 4812435  T
Q  771 aacagcaagagataaa 786  Q
    ||||||||||||||||    
T  4812436 aacagcaagagataaa 4812451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 16757109 - 16757229
Alignment:
Q  668 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16757109 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 16757208  T
Q  766 acaaaaacagcaagagataaa 786  Q
    |||||||||||||||||||||    
T  16757209 acaaaaacagcaagagataaa 16757229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 16752374 - 16752493
Alignment:
Q  669 tgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16752374 tgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 16752473  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||||||||||||||||||    
T  16752474 caaaaacagcaagagataaa 16752493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 28328240 - 28328120
Alignment:
Q  668 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28328240 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 28328141  T
Q  766 acaaaaacagcaagagataaa 786  Q
    |||||||||||||||| ||||    
T  28328140 acaaaaacagcaagagttaaa 28328120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 28332962 - 28332843
Alignment:
Q  669 tgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28332962 tgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 28332863  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||||||||||||| ||||    
T  28332862 caaaaacagcaagagttaaa 28332843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 23179410 - 23179531
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23179410 tgttgtgaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaaca 23179509  T
Q  769 a----aaacagcaagagataaa 786  Q
    |    |||||||||||||||||    
T  23179510 aaagtaaacagcaagagataaa 23179531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 25684972 - 25684853
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  25684972 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaaacaagtgggtagcaaataatccaaac 25684873  T
Q  768 a-aaaacagcaagagataaa 786  Q
    | |||||||||||| |||||    
T  25684872 aaaaaacagcaagaaataaa 25684853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 9020956 - 9021079
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaa-acttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||| || |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9020956 ttgttgtgaatttgtcgagaaaaccacaccaataaagacttaatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 9021055  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  9021056 caaaagtaaacagcaagagataaa 9021079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 669 - 767
Target Start/End: Original strand, 29554705 - 29554803
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  29554705 tgttgtgaattcgttgagaaaaccacaccaataatacttgatgcgtggagtaaattaatatcaagtaatcaaatcaagctggtagcaaataatccaaac 29554803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 3276626 - 3276504
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||| |||  |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3276626 tgttgtgaattccttgttaaaaccacaccaataaaaacttgatgcgtggagcaaattaataacaagtaatcaaatcaagcgggtagcaaataatccaaac 3276527  T
Q  768 aa----aaacagcaagagataaa 786  Q
    ||    |||||||||||||||||    
T  3276526 aaaagtaaacagcaagagataaa 3276504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 591126 - 591005
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaactt-gatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcc---a 764  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||   |    
T  591126 tgttgtgaattcgttgagaaaaccacaccaataaaaatttgatgcgtggaaaaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaata 591027  T
Q  765 aacaaaaacagcaagagataaa 786  Q
    ||  ||||||||||||||||||    
T  591026 aaataaaacagcaagagataaa 591005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 667 - 771
Target Start/End: Original strand, 17799276 - 17799381
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||  ||| || |||||||||||||||||||||||||||||||||||||||||| |||    
T  17799276 tttgttgtgaattcgttgtgaaaaccacaccaataaaaacttgatatgtgaagtaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaa 17799375  T
Q  766 acaaaa 771  Q
    ||||||    
T  17799376 acaaaa 17799381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 687 - 766
Target Start/End: Complemental strand, 21034181 - 21034100
Alignment:
Q  687 aaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21034181 aaaaccacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 21034100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 26268084 - 26268207
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||| ||||    
T  26268084 tgttgtgaattcgttctgaaaaccacaccaataataaacttgatgcgtggagcaaattaataccatgtaattaaatcaagctggtagaaaataattcaaa 26268183  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  26268184 caaaagtaaacagcaagagataaa 26268207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 668 - 740
Target Start/End: Original strand, 4823550 - 4823622
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaa 740  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  4823550 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgtgtggagaaaattaataccaagtaatcaa 4823622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 30423541 - 30423420
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataatccaaac 767  Q
    |||||||||||| |||  |||| |||||||||||||||||||| |||||||||| ||| |||||| |||||||||||||||||  ||| ||||| |||||    
T  30423541 tgttgtgaattcattgcaaaaatcacaccaataaaacttgatgtgtggagcaaa-taaaaccaagcaatcaaatcaagcgggtgacaatataattcaaac 30423443  T
Q  768 aa----aaacagcaagagataaa 786  Q
    ||    |||||||||||||||||    
T  30423442 aaaaataaacagcaagagataaa 30423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 681 - 771
Target Start/End: Complemental strand, 33032971 - 33032879
Alignment:
Q  681 gttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 771  Q
    |||| |||||| ||||||||||||  |||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||    
T  33032971 gttgtgaaaacgacaccaataaaaaacttgatgcatagagcaaattaatatcaagtaatcaaatcaagcgagtagcaaataattaaaacaaaa 33032879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 723
Target Start/End: Complemental strand, 28228842 - 28228790
Alignment:
Q  671 ttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaat 723  Q
    ||||||||||||||  |||| |||||||||||||||||||| |||||| ||||    
T  28228842 ttgtgaattcgttgtaaaaatcacaccaataaaacttgatgtgtggagaaaat 28228790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 721
Target Start/End: Complemental strand, 3874489 - 3874435
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 721  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||||    
T  3874489 tttgttgtgaattcgttga-aaaatcacaccaataacaacttgatgtgtggagcaa 3874435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 772
Target Start/End: Original strand, 2266935 - 2267039
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaata-aaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaat-aatccaa 765  Q
    |||||||||||||||||  |||| |||||||||| |||||||||| || ||||||| ||| |||||  ||||||||||||| |||  ||||| ||| |||    
T  2266935 ttgttgtgaattcgttgcaaaaatcacaccaatataaacttgatgtgt-gagcaaa-taaaaccaaacaatcaaatcaagcaggtgacaaataaattcaa 2267032  T
Q  766 acaaaaa 772  Q
    |||||||    
T  2267033 acaaaaa 2267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 721
Target Start/End: Original strand, 28251410 - 28251463
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 721  Q
    ||||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||    
T  28251410 tgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtggagcaa 28251463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 118; Significance: 9e-60; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 231445 - 231328
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  231445 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 231346  T
Q  769 aaaacagcaagagataaa 786  Q
    ||||||||||||||||||    
T  231345 aaaacagcaagagataaa 231328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 3e-56; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 25405746 - 25405627
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405746 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 25405647  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||||||||||||||||||    
T  25405646 caaaaacagcaagagataaa 25405627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 7070127 - 7070008
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7070127 ttgttgtgaattcgtagagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 7070028  T
Q  768 a-aaaacagcaagagataaa 786  Q
    | ||||||||||||||||||    
T  7070027 aaaaaacagcaagagataaa 7070008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 8378357 - 8378473
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  8378357 tgttgtgaattcgttgagaaaaccagaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaattaagcgggtagcaaataatccaaac- 8378455  T
Q  769 aaaacagcaagagataaa 786  Q
    ||||||||||||||||||    
T  8378456 aaaacagcaagagataaa 8378473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 3319869 - 3319988
Alignment:
Q  669 tgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3319869 tgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaattaatccaaa 3319968  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||||||||||||||||||    
T  3319969 caaaaacagcaagagataaa 3319988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 7075127 - 7075009
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7075127 tgttgtgaattcgtagagaaaatcacaccaataaaacttgatgcgtggagaaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 7075028  T
Q  769 -aaaacagcaagagataaa 786  Q
     ||||||||||||||||||    
T  7075027 aaaaacagcaagagataaa 7075009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 25351684 - 25351561
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25351684 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 25351585  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  25351584 caaaagtaaacagcaagagataaa 25351561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 3324636 - 3324756
Alignment:
Q  668 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  3324636 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaattaatgcaa 3324735  T
Q  766 acaaaaacagcaagagataaa 786  Q
    ||||||||| |||||||||||    
T  3324736 acaaaaacaacaagagataaa 3324756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 15540843 - 15540963
Alignment:
Q  668 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  15540843 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaaacaagcggatagcaaataatccaa 15540942  T
Q  766 acaaaaacagcaagagataaa 786  Q
    |||||||||||||| ||||||    
T  15540943 acaaaaacagcaagcgataaa 15540963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 669 - 772
Target Start/End: Complemental strand, 30247303 - 30247198
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30247303 tgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgcgcggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 30247204  T
Q  767 caaaaa 772  Q
    ||||||    
T  30247203 caaaaa 30247198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 668 - 785
Target Start/End: Complemental strand, 2075437 - 2075320
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2075437 ttgttgtgaattcgttgagaaa--cacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcaaaacaagcgggtagcaaataatccaa 2075340  T
Q  766 acaaaaacagcaagagataa 785  Q
    ||||||| ||||||||||||    
T  2075339 acaaaaatagcaagagataa 2075320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 668 - 772
Target Start/End: Original strand, 7464364 - 7464469
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7464364 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaattaatccaaa 7464463  T
Q  767 caaaaa 772  Q
     |||||    
T  7464464 aaaaaa 7464469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 44143722 - 44143843
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44143722 tgttgcgaattcgttgtgaaaaccacaccaataaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaaca 44143821  T
Q  769 a----aaacagcaagagataaa 786  Q
    |    |||||||||||||||||    
T  44143822 aaagtaaacagcaagagataaa 44143843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 671 - 772
Target Start/End: Original strand, 34546734 - 34546835
Alignment:
Q  671 ttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaa 770  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  34546734 ttgtgaatttgttgagaaaaccacaccaataaaacttgatgcgtggaacaaattaatatcaagtaatcaaattaagcgggtagcaaataatccaaacaaa 34546833  T
Q  771 aa 772  Q
    ||    
T  34546834 aa 34546835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 668 - 771
Target Start/End: Original strand, 44016513 - 44016618
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||    
T  44016513 ttgttgtgaattcgttgtgaaaaccacaccaataataaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtggatagcaaataattaaa 44016612  T
Q  766 acaaaa 771  Q
    ||||||    
T  44016613 acaaaa 44016618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 668 - 771
Target Start/End: Complemental strand, 25357379 - 25357274
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||| ||    
T  25357379 ttgttgtcaattcgttgagaaaaccacaccaataacaaacttgatgtgtggagcaaaataatatcaagtaatcaaatcaagcgggtagcaaataatcaaa 25357280  T
Q  766 acaaaa 771  Q
    | ||||    
T  25357279 agaaaa 25357274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 669 - 771
Target Start/End: Complemental strand, 2121229 - 2121128
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaata-aaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| || |||||| ||||||||||    
T  2121229 tgttgtgaattcgttgagaaa--cacaccaatataaacttgatgtgtggagcaaattaataccaagcaatcaaatcaagtggatagcaattaatccaaac 2121132  T
Q  768 aaaa 771  Q
    ||||    
T  2121131 aaaa 2121128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 44010602 - 44010726
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||  |||||| ||||||||||  || ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||    
T  44010602 ttgttgtgaattcgttctgaaaactacaccaataataaatttgatgcatggagcaaattaatatcaagtaatcaaatcaagcggatagcaaataattcaa 44010701  T
Q  766 acaa----aaacagcaagagataaa 786  Q
    ||||    |||||||||||||||||    
T  44010702 acaaaagtaaacagcaagagataaa 44010726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 671 - 771
Target Start/End: Complemental strand, 25410463 - 25410361
Alignment:
Q  671 ttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    ||||||||| |||||||||| ||||| |||||  ||||||||| || ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  25410463 ttgtgaatttgttgagaaaatcacactaataacaaacttgatgtgttgagcaaaataatatcaagtaatcaaatcaagcgggtagcaaataatccaaaca 25410364  T
Q  769 aaa 771  Q
    |||    
T  25410363 aaa 25410361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 668 - 771
Target Start/End: Complemental strand, 42006993 - 42006888
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||| | |||||||| || |||||  ||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||| |||    
T  42006993 ttgttgtgaattcgtagtgaaaaccatacaaataataaacttgatgcgtgaagcaaattaatacaaagtaatcaaatcaagcgagtatcaaataattcaa 42006894  T
Q  766 acaaaa 771  Q
    ||||||    
T  42006893 acaaaa 42006888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 671 - 751
Target Start/End: Complemental strand, 21369970 - 21369888
Alignment:
Q  671 ttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt 751  Q
    ||||||||||| || ||||| ||||| |||||  || |||||||||||||||||||||||| |||||||||||||||||||||    
T  21369970 ttgtgaattcggtgtgaaaagcacactaataataaatttgatgcgtggagcaaattaatactaagtaatcaaatcaagcgggt 21369888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 667 - 727
Target Start/End: Original strand, 44512361 - 44512423
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaat--aaaacttgatgcgtggagcaaattaat 727  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  44512361 tttgttgtgaattcgttgagaaaaacacaccaataaaaaacttgatgcgtggagcaaattaat 44512423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 668 - 721
Target Start/End: Complemental strand, 24749036 - 24748981
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    |||||||||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  24749036 ttgttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 24748981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 721
Target Start/End: Complemental strand, 444045 - 443989
Alignment:
Q  668 ttgttgtgaattcgttgagaaaac-cacaccaata--aaacttgatgcgtggagcaa 721  Q
    |||||||||||||| ||||||||| ||||||||||  |||||||||| |||||||||    
T  444045 ttgttgtgaattcgatgagaaaactcacaccaataacaaacttgatgtgtggagcaa 443989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 3e-56; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 6303643 - 6303524
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6303643 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 6303544  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||||||||||||||||||    
T  6303543 caaaaacagcaagagataaa 6303524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 10099923 - 10100042
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10099923 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 10100022  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||||||||||||||||||    
T  10100023 caaaaacagcaagagataaa 10100042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 10093923 - 10094041
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10093923 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 10094022  T
Q  768 aaaaacagcaagagataaa 786  Q
    |||||||||||||||||||    
T  10094023 aaaaacagcaagagataaa 10094041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 10200805 - 10200923
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10200805 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 10200904  T
Q  768 aaaaacagcaagagataaa 786  Q
    |||||||||||||||||||    
T  10200905 aaaaacagcaagagataaa 10200923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 54193557 - 54193439
Alignment:
Q  669 tgttgtgaattcgtt-gagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  54193557 tgttgtgaattcgtttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaaccaagcgggtagcaaataatccaaac 54193458  T
Q  768 aaaaacagcaagagataaa 786  Q
    |||||||||||||||||||    
T  54193457 aaaaacagcaagagataaa 54193439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 669 - 785
Target Start/End: Complemental strand, 27544619 - 27544504
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  27544619 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgttgagcaaattaatatcaagtaatcaaatcaagcgggtagcaaataatccaaac- 27544521  T
Q  769 aaaacagcaagagataa 785  Q
    |||||||||||||||||    
T  27544520 aaaacagcaagagataa 27544504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 54188842 - 54188723
Alignment:
Q  668 ttgttgtgaattcgtt-gagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54188842 ttgttgtgaattcgtttgagaaaaccacaccaataaaatttgatgcgtggagcaaattaataccaagtaatcaaaccaagcgggtagcaaataatccaaa 54188743  T
Q  767 caaaaacagcaagagataaa 786  Q
    |||||||| |||||||||||    
T  54188742 caaaaacaacaagagataaa 54188723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 22625828 - 22625947
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  22625828 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaataccaagtaatcaaaagaagcgggtagcaaataatccaaa 22625927  T
Q  767 caaaaacagcaagagataaa 786  Q
    |||||||| |||||||||||    
T  22625928 caaaaacaacaagagataaa 22625947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 10897337 - 10897214
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10897337 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggaacaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 10897238  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  10897237 caaaaataaacagcaagagataaa 10897214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 667 - 786
Target Start/End: Complemental strand, 11079847 - 11079724
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  11079847 tttgttgtgaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagcaaataattcaaa 11079748  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  11079747 caaaagtaaacagcaagagataaa 11079724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 5858874 - 5858753
Alignment:
Q  669 tgttgtgaattcg-ttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatc---ca 764  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  5858874 tgttgtgaattcgattgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaca 5858775  T
Q  765 aacaaaaacagcaagagataaa 786  Q
    ||  ||||||||||||||||||    
T  5858774 aaataaaacagcaagagataaa 5858753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 667 - 771
Target Start/End: Original strand, 29897525 - 29897631
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca 764  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  29897525 tttgttgtgaattcgttgagaaaaccacaccaataacaaacttgatgtgtggagcagattaataccaaataatcaaatcaagcgggtagcaaataatcca 29897624  T
Q  765 aacaaaa 771  Q
    |||||||    
T  29897625 aacaaaa 29897631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 10594883 - 10595006
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa- 766  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  10594883 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatacgtggagtaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaa 10594982  T
Q  767 caaaa----acagcaagagataaa 786  Q
    |||||    |||||||||||||||    
T  10594983 caaaagtaaacagcaagagataaa 10595006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 47882737 - 47882859
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||    
T  47882737 ttgttgtgaattcattgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaattaatcaaatcaagtgggtagtaaataattcaaac 47882836  T
Q  768 aa----aaacagcaagagataaa 786  Q
    ||    |||||||||||||||||    
T  47882837 aaaagtaaacagcaagagataaa 47882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 669 - 773
Target Start/End: Original strand, 10949115 - 10949219
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  10949115 tgttgtgaattcgctgtgaaaaccacatcaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagctcgtagcaaataattcaaaca 10949214  T
Q  769 aaaac 773  Q
    |||||    
T  10949215 aaaac 10949219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 668 - 773
Target Start/End: Original strand, 20031169 - 20031276
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||| |||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20031169 ttgttgtgaattcgttgtgaaaaccacaccaataaaaaacatgatgcgtagagcaaattaataccaagtaatcaaatcaagcgggtagcgaataatccaa 20031268  T
Q  766 acaaaaac 773  Q
    ||||||||    
T  20031269 acaaaaac 20031276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 668 - 771
Target Start/End: Original strand, 29913804 - 29913908
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29913804 ttgttgtgaatt-gttgagaaaaccacaccaataacaaacttgatgtgtggagcagattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 29913902  T
Q  766 acaaaa 771  Q
    ||||||    
T  29913903 acaaaa 29913908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 675 - 786
Target Start/End: Original strand, 47878033 - 47878147
Alignment:
Q  675 gaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa----a 770  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    |    
T  47878033 gaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaata-caagtaatcaaatcaagtgggtagcaaataattcaaacaaaagta 47878131  T
Q  771 aacagcaagagataaa 786  Q
    ||||||||||||||||    
T  47878132 aacagcaagagataaa 47878147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 3330221 - 3330098
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||    
T  3330221 tgttgtgaattcgttgtgaaaaccacaccaataacaaacttgatgcgcggagcaaattaataccaagtaatcaaatcaagcggatagcaaataactcaaa 3330122  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  3330121 caaaagtaaacagcaagagataaa 3330098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 668 - 766
Target Start/End: Original strand, 10612626 - 10612725
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  10612626 ttgttatgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccagataatcaaatcaagcgagtagcaaataatccaaa 10612725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 669 - 772
Target Start/End: Complemental strand, 4535946 - 4535842
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttga-tgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||||  ||||||| |||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4535946 tgttgtgaattcgttgtaaaaaccagaccaataaaaatttaatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagcaaataatccaaac 4535847  T
Q  768 aaaaa 772  Q
    |||||    
T  4535846 aaaaa 4535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 27761839 - 27761962
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||| ||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  27761839 ttgttgtaaattcgttgtgaaaaacacaccaataaaaacttgatgcatggagcaaattaatatcaactaatcaaatcaagcgggtagcaaataattcaaa 27761938  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  27761939 caaaagtaaacagcaagagataaa 27761962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 669 - 774
Target Start/End: Original strand, 48390152 - 48390260
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa---cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||||||||  |||||||||||||   |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||    
T  48390152 tgttgtgaattcgttgagaaagtcacaccaataaaaaaacttgatgcgtggagcaaattaatatcaagtaatcaaatcaaacgggtaacaaataattcaa 48390251  T
Q  766 acaaaaaca 774  Q
    |||||||||    
T  48390252 acaaaaaca 48390260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 701 - 786
Target Start/End: Complemental strand, 16462495 - 16462406
Alignment:
Q  701 aaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa----aaacagcaagagataaa 786  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    |||||||||||||||||    
T  16462495 aaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtatcaattaatccaaacaaaaataaacagcaagagataaa 16462406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 669 - 761
Target Start/End: Complemental strand, 38003195 - 38003103
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataat 761  Q
    |||||||||||  |||  |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  38003195 tgttgtgaattgattgtaaaaaccacaccaataaaatttgacgcgtggagcaaattaataccaagtaatcaaataaagtgggtagcaaataat 38003103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 681 - 751
Target Start/End: Complemental strand, 7418378 - 7418306
Alignment:
Q  681 gttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt 751  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  7418378 gttgtgaaaaccacaccaataataaacttgatgcgtggaacaaattaatacaaagtaatcaaatcaagcgggt 7418306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 670 - 771
Target Start/End: Complemental strand, 13893789 - 13893686
Alignment:
Q  670 gttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataatccaaac 767  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||| || |||||||| || ||  |||||||||||||||||  ||| ||||| |||||    
T  13893789 gttgtgaattcgttgtgaaaaacacaccaataaaaccttgatgcgttgaacaaattaaaactaaacaatcaaatcaagcgggtgacaatataattcaaac 13893690  T
Q  768 aaaa 771  Q
    ||||    
T  13893689 aaaa 13893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 668 - 727
Target Start/End: Complemental strand, 27421056 - 27420998
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaat 727  Q
    ||||||||||||| |||| |||| |||||||||||||||||||| || ||||||||||||    
T  27421056 ttgttgtgaattcattga-aaaatcacaccaataaaacttgatgtgttgagcaaattaat 27420998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 727
Target Start/End: Complemental strand, 16997209 - 16997150
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaa-acttgatgcgtggagcaaattaat 727  Q
    |||||| |||||| |||||||| |||||||||||| |||||||  |||||||||||||||    
T  16997209 tgttgtaaattcggtgagaaaatcacaccaataaatacttgatatgtggagcaaattaat 16997150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 721
Target Start/End: Original strand, 36871148 - 36871202
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaa-acttgatgcgtggagcaa 721  Q
    |||||||||||||||||| |||| |||||| ||||| |||||||| |||||||||    
T  36871148 ttgttgtgaattcgttgaaaaaatcacaccgataaatacttgatgtgtggagcaa 36871202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 728
Target Start/End: Original strand, 14634289 - 14634350
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaa--acttgatgcgtggagcaaattaata 728  Q
    |||||||||||||||||  ||||| ||||||||||||  |||||||| ||||| ||||||||||    
T  14634289 tttgttgtgaattcgtt--gaaaatcacaccaataaaatacttgatgtgtggaacaaattaata 14634350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 17824 - 17706
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17824 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 17725  T
Q  768 aaaaacagcaagagataaa 786  Q
    |||||||||||||||||||    
T  17724 aaaaacagcaagagataaa 17706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 1e-55; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 31248544 - 31248662
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31248544 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 31248643  T
Q  768 aaaaacagcaagagataaa 786  Q
    |||||||||||||||||||    
T  31248644 aaaaacagcaagagataaa 31248662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 13883806 - 13883687
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13883806 tgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaaacgggtagcaaataatccaaa 13883707  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||||||||||||||||||    
T  13883706 caaaaacagcaagagataaa 13883687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 30987356 - 30987473
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30987356 tgttgtgaattcgacgaggaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagcaaataatccaaaca 30987455  T
Q  769 aaaacagcaagagataaa 786  Q
    ||||||||||||||||||    
T  30987456 aaaacagcaagagataaa 30987473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 13879071 - 13878951
Alignment:
Q  668 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13879071 ttgttgtgaattcgttgagaaaaaccacaccaaaaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 13878972  T
Q  766 acaaaaacagcaagagataaa 786  Q
    |||||||||||||||||||||    
T  13878971 acaaaaacagcaagagataaa 13878951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 35201156 - 35201274
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35201156 ttgttgtgaattcgttgagaaaaccacactaataaaaacttgatgcgtggagcaaattaatac-aagtaatcaaatcaagcgggtagcaaataatccaaa 35201254  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||||||||||||||||||    
T  35201255 caaaaacagcaagagataaa 35201274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 16786265 - 16786147
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16786265 ttgttgtgaatttgttgagaaaaccacaacaataagacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 16786166  T
Q  768 aaaaacagcaagagataaa 786  Q
    ||||||| ||||| |||||    
T  16786165 aaaaacaacaagaaataaa 16786147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 3577338 - 3577460
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3577338 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 3577437  T
Q  768 aa----aaacagcaagagataaa 786  Q
    ||    |||||||||||||||||    
T  3577438 aaaagtaaacagcaagagataaa 3577460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 25942001 - 25941878
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25942001 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggaacaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 25941902  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  25941901 caaaaataaacagcaagagataaa 25941878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 669 - 772
Target Start/End: Original strand, 25465754 - 25465858
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25465754 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgtgtagcaaataatccaaac 25465853  T
Q  768 aaaaa 772  Q
    |||||    
T  25465854 aaaaa 25465858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 667 - 786
Target Start/End: Original strand, 26887075 - 26887195
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  26887075 tttgttgtgaattcgtcgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaatatcaagtaatcaaaacaagcgggtagcaattaatccaa 26887174  T
Q  766 acaaaaacagcaagagataaa 786  Q
    |||||| ||||||||||||||    
T  26887175 acaaaaccagcaagagataaa 26887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 668 - 766
Target Start/End: Original strand, 17694700 - 17694799
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17694700 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaataccaagtaatcaaatcaagcggatagcaaataatccaaa 17694799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 686 - 786
Target Start/End: Complemental strand, 17038550 - 17038449
Alignment:
Q  686 gaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagagata 784  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17038550 gaaaatcacaccaataaaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagaaata 17038451  T
Q  785 aa 786  Q
    ||    
T  17038450 aa 17038449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 667 - 771
Target Start/End: Complemental strand, 33216161 - 33216055
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca 764  Q
    |||||||||||||| |||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33216161 tttgttgtgaattccttgtaaaaaccacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcatatcaagcgggtagcaaataatcca 33216062  T
Q  765 aacaaaa 771  Q
    |||||||    
T  33216061 aacaaaa 33216055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 22351703 - 22351826
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa- 766  Q
    |||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  22351703 ttgttgtgaattcgttgtaaaaatcacaccaataaaacttgatgtgtggagcaaattaataccaagtaatcaaatcaagcgggtaacaaataatccaaaa 22351802  T
Q  767 caaaa----acagcaagagataaa 786  Q
    |||||    |||||||||||||||    
T  22351803 caaaagtaaacagcaagagataaa 22351826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 22342651 - 22342774
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca-aa 766  Q
    |||||||||||||||||  |||| ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  22342651 ttgttgtgaattcgttgtaaaaatcacaccaataaaacttgatgtatggagcaaattaataccaaataatcaaatcaagcgggtagcaaataatccataa 22342750  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  22342751 caaaagtaaacagcaagagataaa 22342774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 681 - 771
Target Start/End: Original strand, 12166010 - 12166102
Alignment:
Q  681 gttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 771  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12166010 gttgtgaaaaccacaccaataataaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaacaaaa 12166102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 669 - 771
Target Start/End: Original strand, 13467318 - 13467422
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaac--ttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||| |||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||||| |||||||||||| || ||||    
T  13467318 tgttgtgaattcgttgtgaaaaccacaccaataaaaaatttgatgcgtggagtaaattaataccaagtaatcaaatcaaacgggtagcaaatgattcaaa 13467417  T
Q  767 caaaa 771  Q
    |||||    
T  13467418 caaaa 13467422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 667 - 771
Target Start/End: Original strand, 19701755 - 19701860
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca 764  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||||||| ||    
T  19701755 tttgttgtgaattcgttgtgaaaaccacaccaataataaacttgatgcgtggaacaaattaa-accaagtaatcaaatcaaacggatagcaaataattca 19701853  T
Q  765 aacaaaa 771  Q
    |||||||    
T  19701854 aacaaaa 19701860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 687 - 771
Target Start/End: Complemental strand, 26643483 - 26643399
Alignment:
Q  687 aaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 771  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||    
T  26643483 aaaagcacaccaataaaacttgatgcgtggagcaaattaataccaagtaatgaaatcaagcggatagaaaataattcaaacaaaa 26643399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 687 - 771
Target Start/End: Complemental strand, 26749449 - 26749365
Alignment:
Q  687 aaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 771  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||    
T  26749449 aaaagcacaccaataaaacttgatgcgtggagcaaattaataccaagtaatgaaatcaagcggatagaaaataattcaaacaaaa 26749365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 668 - 746
Target Start/End: Original strand, 5165692 - 5165772
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaag 746  Q
    |||| |||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  5165692 ttgtcgtgaattcgttgtgaaaaacacaccaataataaacttgatgcgtggagcaaattaataccaagtaatcaaatcaag 5165772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 671 - 786
Target Start/End: Complemental strand, 17066179 - 17066057
Alignment:
Q  671 ttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataatccaaac 767  Q
    |||||||||| ||| |||||||||||||||||||  | |||||||||||| ||||||| | |||| ||||||||||||| |||  ||| ||||| |||||    
T  17066179 ttgtgaattcattgtgaaaaccacaccaataaaaaacctgatgcgtggagtaaattaaaatcaagcaatcaaatcaagctggtgacaatataattcaaac 17066080  T
Q  768 aa----aaacagcaagagataaa 786  Q
    ||    |||||||||||||||||    
T  17066079 aaaaataaacagcaagagataaa 17066057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 668 - 721
Target Start/End: Complemental strand, 10584414 - 10584359
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    |||||||||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  10584414 ttgttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 10584359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 713 - 746
Target Start/End: Original strand, 5165772 - 5165805
Alignment:
Q  713 gtggagcaaattaataccaagtaatcaaatcaag 746  Q
    ||||||||||||||||||||||||||||||||||    
T  5165772 gtggagcaaattaataccaagtaatcaaatcaag 5165805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 721
Target Start/End: Original strand, 5273055 - 5273108
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 721  Q
    ||||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||    
T  5273055 tgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtggagcaa 5273108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 1e-55; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 15831478 - 15831360
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15831478 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 15831379  T
Q  768 aaaaacagcaagagataaa 786  Q
    |||||||||||||||||||    
T  15831378 aaaaacagcaagagataaa 15831360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 11853898 - 11853778
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11853898 ttgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgggtggagcaaattaataccaagcaatcaaatcaagcgggtagcaaataatccaa 11853799  T
Q  766 acaaaaacagcaagagataaa 786  Q
    |||||||||||||||||||||    
T  11853798 acaaaaacagcaagagataaa 11853778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 15312650 - 15312526
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15312650 ttgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 15312551  T
Q  766 acaa----aaacagcaagagataaa 786  Q
    ||||    |||||||||||||||||    
T  15312550 acaaaagtaaacagcaagagataaa 15312526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 667 - 786
Target Start/End: Complemental strand, 18587300 - 18587176
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18587300 tttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaa 18587201  T
Q  766 acaa----aaacagcaagagataaa 786  Q
    ||||    |||||||||||||||||    
T  18587200 acaaaaataaacagcaagagataaa 18587176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 667 - 786
Target Start/End: Original strand, 16688792 - 16688916
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  16688792 tttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaatatcaagtaatcgaatcaagcgggtagcaaataatccaa 16688891  T
Q  766 acaa----aaacagcaagagataaa 786  Q
    ||||    |||||||||||||||||    
T  16688892 acaaaagtaaacagcaagagataaa 16688916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 667 - 786
Target Start/End: Original strand, 7050123 - 7050246
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  7050123 tttgttgtgaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagttatcaaatcaagcgggtagcatataattcaaa 7050222  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  7050223 caaaattaaacagcaagagataaa 7050246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 668 - 769
Target Start/End: Complemental strand, 4570421 - 4570320
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4570421 ttgttgtgaattcgttttgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaac 4570322  T
Q  768 aa 769  Q
    ||    
T  4570321 aa 4570320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 4555915 - 4556036
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  4555915 tgttgtgaatttgttgagaaaaccacaccaataaaatttgatgcgtggagcaaattaataccaaataatcaaatcaagcgggtagcaattaatccaaaca 4556014  T
Q  769 a----aaacagcaagagataaa 786  Q
    |    |||||||||||||||||    
T  4556015 aaagtaaacagcaagagataaa 4556036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 668 - 766
Target Start/End: Complemental strand, 8529601 - 8529502
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8529601 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaatagtccaaa 8529502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 4558640 - 4558516
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||    
T  4558640 ttgttgtgaattcgttgagaaaaccacaccaataataaacttgatgcgtggagcaaattattaccaagtaatcaaatcaagcgggtatcaaataattcaa 4558541  T
Q  766 acaaa----aacagcaagagataaa 786  Q
    |||||    ||||||||||||||||    
T  4558540 acaaaaattaacagcaagagataaa 4558516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 15317290 - 15317167
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  15317290 tgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgcatggagcaaatgaataccaagtaatccaatcaagcgggtagcaaataatccaaa 15317191  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  15317190 caaaagtaaacagcaagagataaa 15317167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 669 - 766
Target Start/End: Complemental strand, 16489681 - 16489583
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16489681 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaatatcaagtaatcaaatcaagcgggtagcaaataatccaaa 16489583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 55822592 - 55822472
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||||||||| | |||||||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  55822592 ttgttgtgaattcgttgagaaaactataccaataaaaacttgatgtgtggagcaaattaatatcaagtaatcaaatcaggcgggtagcaattaatccaaa 55822493  T
Q  767 ca-aaaacagcaagagataaa 786  Q
    || ||||||||||||||||||    
T  55822492 caaaaaacagcaagagataaa 55822472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 668 - 770
Target Start/End: Complemental strand, 4885203 - 4885100
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4885203 ttgttgtgaattcgttgtaaaaatcacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtaacaaataatccaaa 4885104  T
Q  767 caaa 770  Q
    ||||    
T  4885103 caaa 4885100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 668 - 771
Target Start/End: Complemental strand, 47566822 - 47566717
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| |||    
T  47566822 ttgttgtgaattctttgagaaaaccacaccaataataaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcggatatcaaataattcaa 47566723  T
Q  766 acaaaa 771  Q
    ||||||    
T  47566722 acaaaa 47566717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 669 - 771
Target Start/End: Complemental strand, 36771725 - 36771621
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||| |||| |||||||||| ||||||  |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  36771725 tgttgtgaatttgttgtgaaaaccacaacaataataaacttgatgcgttgagcaaattaataccaaataatcaaatcaagcgggtagcaaataattcaaa 36771626  T
Q  767 caaaa 771  Q
    |||||    
T  36771625 caaaa 36771621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 674 - 771
Target Start/End: Complemental strand, 36769803 - 36769704
Alignment:
Q  674 tgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 771  Q
    ||||||||||| |||||||||||||||||  ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  36769803 tgaattcgttgtgaaaaccacaccaataataaacttgatgcgtgaagcaaattaatatcaagtaatcaaatcaagtgggtagcaaataattcaaacaaaa 36769704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 668 - 723
Target Start/End: Complemental strand, 31300733 - 31300677
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaat-aaaacttgatgcgtggagcaaat 723  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  31300733 ttgttatgaattcgttgagaaaaccacaccaataaaaacttgatgcgtgaagcaaat 31300677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 669 - 744
Target Start/End: Original strand, 4874336 - 4874410
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatca 744  Q
    ||||||||||||||||  |||| |||||||| ||||||||||  |||||||| ||||| |||||| ||||||||||    
T  4874336 tgttgtgaattcgttgcaaaaatcacaccaacaaaacttgatatgtggagcatattaa-accaagcaatcaaatca 4874410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 738 - 786
Target Start/End: Complemental strand, 31300681 - 31300629
Alignment:
Q  738 caaatcaagcgggtagcaaataatccaaacaa----aaacagcaagagataaa 786  Q
    ||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  31300681 caaatcaagcgggtagcaaataatccaaacaaaagtaaacagcaagagataaa 31300629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 723
Target Start/End: Original strand, 32273806 - 32273860
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaat 723  Q
    ||||||||||||||||  |||| ||||||||||||||||||||  ||||||||||    
T  32273806 tgttgtgaattcgttgcaaaaatcacaccaataaaacttgatgtctggagcaaat 32273860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 772
Target Start/End: Original strand, 25613810 - 25613915
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt-agcaaataatccaa 765  Q
    |||| |||||||||||  ||||| ||||||||||||  ||||||| || ||||||||||| |||||  ||||||||||||| ||| |  ||||||| |||    
T  25613810 tgttatgaattcgttgcaaaaac-acaccaataaaaaacttgatgtgttgagcaaattaaaaccaaacaatcaaatcaagcaggtgaaaaaataattcaa 25613908  T
Q  766 acaaaaa 772  Q
    |||||||    
T  25613909 acaaaaa 25613915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 721
Target Start/End: Complemental strand, 47563248 - 47563194
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    ||||||||||| | |||||||||||||||||||  |||||||||| |||||||||    
T  47563248 tgttgtgaatttgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 47563194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 727
Target Start/End: Original strand, 16185685 - 16185746
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaa--acttgatgcgtggagcaaattaat 727  Q
    |||||||||||||||||| || | ||||||||||||  ||||||||  ||||||||||||||    
T  16185685 ttgttgtgaattcgttgaaaagatcacaccaataaaatacttgatgtatggagcaaattaat 16185746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 749
Target Start/End: Complemental strand, 16639155 - 16639075
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgg 749  Q
    ||||||||||||| |||  ||||| | |||||||||| ||||||| |||||||||| ||| |||||| |||||||||||||||    
T  16639155 ttgttgtgaattctttgcaaaaac-ataccaataaaaacttgatgtgtggagcaaa-taaaaccaagcaatcaaatcaagcgg 16639075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 756
Target Start/End: Complemental strand, 16631512 - 16631425
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa 756  Q
    |||||||||||| ||||  ||||| | |||||||||| |||||| | |||||||||| || |||||| ||||||||||||||||| ||||    
T  16631512 ttgttgtgaatttgttgcaaaaacaa-accaataaaaacttgatccatggagcaaataaa-accaagaaatcaaatcaagcgggtggcaa 16631425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 721
Target Start/End: Original strand, 18709003 - 18709056
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 721  Q
    ||||||||||| | ||| |||||||||||||||| ||||||||| |||||||||    
T  18709003 tgttgtgaatttgatgaaaaaaccacaccaataacaacttgatgtgtggagcaa 18709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 721
Target Start/End: Complemental strand, 40637566 - 40637513
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 721  Q
    ||||| |||||||||||||| | ||||||||||| ||||||||| |||||||||    
T  40637566 tgttgcgaattcgttgagaatatcacaccaataacaacttgatgtgtggagcaa 40637513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 667 - 786
Target Start/End: Original strand, 2917 - 3037
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2917 tttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 3016  T
Q  766 acaaaaacagcaagagataaa 786  Q
    ||||||||||||||| |||||    
T  3017 acaaaaacagcaagaaataaa 3037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 1e-52; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 2736537 - 2736417
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2736537 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtagagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 2736438  T
Q  768 a--aaaacagcaagagataaa 786  Q
    |  ||||||||||||||||||    
T  2736437 aaaaaaacagcaagagataaa 2736417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 45680055 - 45679935
Alignment:
Q  668 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45680055 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 45679956  T
Q  766 acaaaaacagcaagagataaa 786  Q
    |||||||||||||||||||||    
T  45679955 acaaaaacagcaagagataaa 45679935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 669 - 772
Target Start/End: Original strand, 27517491 - 27517594
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27517491 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 27517590  T
Q  769 aaaa 772  Q
    ||||    
T  27517591 aaaa 27517594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 22717082 - 22717204
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22717082 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaattaatccaaac 22717181  T
Q  768 aa----aaacagcaagagataaa 786  Q
    ||    |||||||||||||||||    
T  22717182 aaaaataaacagcaagagataaa 22717204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 22712374 - 22712495
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  22712374 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtatcaattaatccaaaca 22712473  T
Q  769 a----aaacagcaagagataaa 786  Q
    |    |||||||||||||||||    
T  22712474 aaaataaacagcaagagataaa 22712495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 33670817 - 33670936
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33670817 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggatcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 33670916  T
Q  768 -aaaaacagcaagagataaa 786  Q
     |||||||||||||| ||||    
T  33670917 aaaaaacagcaagaggtaaa 33670936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 39680378 - 39680257
Alignment:
Q  668 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39680378 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 39680279  T
Q  766 aca-aaaacagcaagagataaa 786  Q
    ||| ||||||||||||| ||||    
T  39680278 acaaaaaacagcaagagttaaa 39680257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 664 - 786
Target Start/End: Complemental strand, 39687326 - 39687201
Alignment:
Q  664 gtgtttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataat 761  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39687326 gtgtctgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataat 39687227  T
Q  762 ccaaaca-aaaacagcaagagataaa 786  Q
    ||||||| ||||||||||||| ||||    
T  39687226 ccaaacaaaaaacagcaagagttaaa 39687201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 681 - 786
Target Start/End: Complemental strand, 2741260 - 2741153
Alignment:
Q  681 gttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca--aaaacagcaa 778  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  2741260 gttgagaaaaccacaccaataaaacttgatgcgtagagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaaaacagcaa 2741161  T
Q  779 gagataaa 786  Q
    ||||||||    
T  2741160 gagataaa 2741153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 671 - 772
Target Start/End: Original strand, 12781075 - 12781177
Alignment:
Q  671 ttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa 769  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12781075 ttgtgaattcgttgagaaaaccataccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa 12781174  T
Q  770 aaa 772  Q
    |||    
T  12781175 aaa 12781177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 668 - 772
Target Start/End: Complemental strand, 38191346 - 38191242
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38191346 ttgttgtgaattcgttgtgaaaatcacaccaataaaacttaatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaac 38191247  T
Q  768 aaaaa 772  Q
    |||||    
T  38191246 aaaaa 38191242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 669 - 784
Target Start/End: Complemental strand, 17943867 - 17943747
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17943867 tgttgtgaattcgttgagaaaaacacaccaataacaaacttgatgcgtggagcaaattaataccaagtaatcaaattaagcgggtagcaaataatccaaa 17943768  T
Q  767 ca---aaaacagcaagagata 784  Q
    ||   ||||||||||||||||    
T  17943767 caaataaaacagcaagagata 17943747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 17462768 - 17462650
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||| |    
T  17462768 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaataccgagtaatcaaatcaagcgggtagcaattaatccaca 17462669  T
Q  767 caaaaacagcaagagataaa 786  Q
    | |||||||||||| |||||    
T  17462668 c-aaaacagcaagaaataaa 17462650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 20054609 - 20054735
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa---cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca 764  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20054609 ttgttgtgaattcgttgagaaaaccacaccaataaaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcggatagcaaataatcca 20054708  T
Q  765 aa-caaaa----acagcaagagataaa 786  Q
    || |||||    |||||||||||||||    
T  20054709 aaacaaaagtaaacagcaagagataaa 20054735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 20049866 - 20049991
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa---cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  20049866 tgttgtgaattcgttgagaaaaccacaccaataaaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaatcggatagcaaataatccaa 20049965  T
Q  766 a-caaaa----acagcaagagataaa 786  Q
    | |||||    |||||||||||||||    
T  20049966 aacaaaagtaaacagcaagagataaa 20049991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 37170606 - 37170729
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  37170606 ttgttgtgaattcgttgtgaaaatcacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagtaaataattcaaa 37170705  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  37170706 caaaagtaaacagcaagagataaa 37170729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 671 - 786
Target Start/End: Complemental strand, 30479322 - 30479203
Alignment:
Q  671 ttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa- 769  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||| ||||||| || || ||||||||||||| ||||||||||||||||||||||     
T  30479322 ttgtgaatttgttgagaaaaccacatcaataatacttgatgcgtggagtaaattaacacaaaataatcaaatcaagtgggtagcaaataatccaaacaaa 30479223  T
Q  770 ---aaacagcaagagataaa 786  Q
       |||||||||||||||||    
T  30479222 aataaacagcaagagataaa 30479203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 723
Target Start/End: Original strand, 28458692 - 28458751
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaat----aaaacttgatgcgtggagcaaat 723  Q
    ||||||||||||| ||| |||||||||||||||    |||||||||||||| ||||||||    
T  28458692 ttgttgtgaattcattgtgaaaaccacaccaataaaaaaaacttgatgcgtagagcaaat 28458751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 721
Target Start/End: Original strand, 22287179 - 22287234
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    ||||||||||||||| |||||||| ||||||||||  |||||||||| |||||||||    
T  22287179 tttgttgtgaattcgatgagaaaa-cacaccaataacaaacttgatgtgtggagcaa 22287234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 721
Target Start/End: Original strand, 42923291 - 42923346
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    |||||||||||||||||| ||||| ||||||||||  |||||||||| |||||||||    
T  42923291 tttgttgtgaattcgttgtgaaaa-cacaccaataacaaacttgatgtgtggagcaa 42923346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 721
Target Start/End: Original strand, 42923349 - 42923404
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    |||||||||||||||||| ||||| ||||||||||  |||||||||| |||||||||    
T  42923349 tttgttgtgaattcgttgtgaaaa-cacaccaataacaaacttgatgtgtggagcaa 42923404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 3e-50; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 669 - 786
Target Start/End: Original strand, 2297849 - 2297965
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  2297849 tgttgtgaattcgttgagaaaaccacaccaacaaaacttgatgcgtggagtaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac- 2297947  T
Q  769 aaaacagcaagagataaa 786  Q
    ||||||||||||||||||    
T  2297948 aaaacagcaagagataaa 2297965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 22673163 - 22673042
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 768  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22673163 tgttgtgaattcgttaagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaaca 22673064  T
Q  769 a----aaacagcaagagataaa 786  Q
    |    |||||||||||||||||    
T  22673063 aaaataaacagcaagagataaa 22673042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 668 - 786
Target Start/End: Original strand, 35385302 - 35385421
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35385302 ttgttgtgaattcattgagaaaactacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 35385401  T
Q  767 caaaaacagcaagagataaa 786  Q
    ||||| || |||||||||||    
T  35385402 caaaatcaacaagagataaa 35385421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 669 - 786
Target Start/End: Complemental strand, 1171142 - 1171024
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 767  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  1171142 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaatatcaagtaatcaaaacaagcgggtagcaattaatccaaac 1171043  T
Q  768 aaaaacagcaagagataaa 786  Q
    |||| ||||||||||||||    
T  1171042 aaaaccagcaagagataaa 1171024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 42238589 - 42238466
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42238589 ttgttgtgaattcgttgtaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 42238490  T
Q  767 caa----aaacagcaagagataaa 786  Q
    |||    |||||||||||||||||    
T  42238489 caaaaataaacagcaagagataaa 42238466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 669 - 766
Target Start/End: Complemental strand, 1240760 - 1240662
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1240760 tgttgtgaattcgttgaggaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 1240662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 691 - 786
Target Start/End: Complemental strand, 25452802 - 25452705
Alignment:
Q  691 ccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagagataaa 786  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25452802 ccacaccaataaaatacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagagataaa 25452705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 671 - 772
Target Start/End: Complemental strand, 28786728 - 28786626
Alignment:
Q  671 ttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa 769  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  28786728 ttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaaataatcaaatcaagcgggtagcaaataattcaaacaa 28786629  T
Q  770 aaa 772  Q
    |||    
T  28786628 aaa 28786626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 691 - 786
Target Start/End: Complemental strand, 25445803 - 25445706
Alignment:
Q  691 ccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagagataaa 786  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25445803 ccacaccaataaaatacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacatcaagagataaa 25445706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 668 - 771
Target Start/End: Complemental strand, 40223098 - 40222993
Alignment:
Q  668 ttgttgtgaattcgttg-agaaaaccacaccaataaaactt-gatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    ||||||||||||||||| | |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  40223098 ttgttgtgaattcgttgtaaaaaaccacaccaataaaaatttgatgcgtggagtaaattaataccaagtaatcaaatcaagagggtagcaaataatccaa 40222999  T
Q  766 acaaaa 771  Q
    ||||||    
T  40222998 acaaaa 40222993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 669 - 771
Target Start/End: Original strand, 11962287 - 11962390
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||| |||||||||||||||||||  |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  11962287 tgttgtgaattcgttgtgaaaaccacaccaataaaaaacttgatgc-tgtagcaaattaatactaagtaatcaaatcaagcgggtagcaaataattcaaa 11962385  T
Q  767 caaaa 771  Q
    |||||    
T  11962386 caaaa 11962390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 675 - 772
Target Start/End: Original strand, 17841110 - 17841207
Alignment:
Q  675 gaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaa 772  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  17841110 gaattcgttgtgaaaactacaccaataaaacttgatgcgtggggcaaattaatatcgagtaatcaaattaagcgggtagcaaataattcaaacaaaaa 17841207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 669 - 771
Target Start/End: Complemental strand, 20437249 - 20437145
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||||| ||||| |||||||| ||  ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  20437249 tgttgtgaattcgttgtgaaaatcacaccaacaataaacttgatgtgttgagcaaattaatatcaagtaatcaaatcaagcgggtagcaaataattcaaa 20437150  T
Q  767 caaaa 771  Q
    |||||    
T  20437149 caaaa 20437145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 669 - 771
Target Start/End: Original strand, 16093144 - 16093249
Alignment:
Q  669 tgttgtgaattcgttgagaaaa-ccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 765  Q
    |||||||||||||||| ||||| ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||  || |||||||| |||    
T  16093144 tgttgtgaattcgttgtgaaaaaccacaccaataataaacttgatgcgtggagtaaattaataccaagtaatcaaatcaagcgaataacaaataattcaa 16093243  T
Q  766 acaaaa 771  Q
    ||||||    
T  16093244 acaaaa 16093249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 668 - 751
Target Start/End: Complemental strand, 10627696 - 10627611
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt 751  Q
    ||||||||||||| ||| |||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  10627696 ttgttgtgaattcattgtgaaaaccacaccaataataaacttgatgcgtggagcaaattaaaaccaagcaatcaaatcaagcgggt 10627611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 668 - 772
Target Start/End: Original strand, 31782310 - 31782413
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataatccaaa 766  Q
    |||||||||||| ||||  |||| || ||||||||||||||||| |||||||| ||  | |||||| |||||||||||||||||  ||| ||||| ||||    
T  31782310 ttgttgtgaatttgttgcaaaaatcataccaataaaacttgatgtgtggagcatat--aaaccaagaaatcaaatcaagcgggtgacaatataattcaaa 31782407  T
Q  767 caaaaa 772  Q
    ||||||    
T  31782408 caaaaa 31782413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 668 - 721
Target Start/End: Original strand, 37705625 - 37705680
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    |||||||||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  37705625 ttgttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 37705680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 721
Target Start/End: Original strand, 17818338 - 17818388
Alignment:
Q  673 gtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 721  Q
    ||||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  17818338 gtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 17818388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 667 - 728
Target Start/End: Original strand, 34033420 - 34033479
Alignment:
Q  667 tttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaata 728  Q
    |||||||||||||| || |  ||| |||||||||||||| ||||| ||||||||||||||||    
T  34033420 tttgttgtgaattcattaa--aaatcacaccaataaaacgtgatgtgtggagcaaattaata 34033479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 721
Target Start/End: Original strand, 10528937 - 10528990
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 721  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||| ||| |||||    
T  10528937 tgttgtgaattcgatgagaaaatcacaccaataacaacttgatgtgtgaagcaa 10528990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 687 - 751
Target Start/End: Original strand, 26406340 - 26406402
Alignment:
Q  687 aaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt 751  Q
    |||| ||||||||||||| |||||| |||||||||||  | |||||| |||||||||||| ||||    
T  26406340 aaaatcacaccaataaaatttgatgtgtggagcaaat--aaaccaagcaatcaaatcaagtgggt 26406402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 668 - 786
Target Start/End: Complemental strand, 16657 - 16540
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 766  Q
    |||||||||||||| |||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16657 ttgttgtgaattcgatga--aaatcacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 16560  T
Q  767 caaaaacagcaagagataaa 786  Q
    |||||||||||||| |||||    
T  16559 caaaaacagcaagaaataaa 16540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 668 - 748
Target Start/End: Original strand, 16884 - 16965
Alignment:
Q  668 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcg 748  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||    
T  16884 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggaaaaaattaataccaagtaatcaaatcaagcg 16965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 721
Target Start/End: Complemental strand, 473 - 421
Alignment:
Q  669 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 721  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  473 tgttgtgaattcgttgag-aaatcacaccaataacaacttgatgtgtggagcaa 421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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