View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5110_low_67 (Length: 274)

Name: NF5110_low_67
Description: NF5110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5110_low_67
NF5110_low_67
[»] chr5 (41 HSPs)
chr5 (37-138)||(2152123-2152226)
chr5 (155-261)||(16650850-16650956)
chr5 (155-258)||(28538676-28538779)
chr5 (155-261)||(25523069-25523175)
chr5 (155-261)||(18486897-18487003)
chr5 (155-261)||(19752912-19753017)
chr5 (155-247)||(40255681-40255773)
chr5 (155-254)||(33160288-33160387)
chr5 (155-261)||(22940618-22940723)
chr5 (158-258)||(20216761-20216861)
chr5 (155-258)||(36486486-36486589)
chr5 (155-261)||(25055412-25055518)
chr5 (158-261)||(24332916-24333019)
chr5 (155-250)||(25056387-25056482)
chr5 (155-261)||(42196195-42196301)
chr5 (157-258)||(36485302-36485403)
chr5 (155-242)||(25524141-25524229)
chr5 (158-258)||(28539818-28539917)
chr5 (155-258)||(1796054-1796157)
chr5 (155-261)||(19754125-19754232)
chr5 (158-261)||(42195137-42195238)
chr5 (163-259)||(1015492-1015588)
chr5 (155-251)||(5778841-5778937)
chr5 (187-255)||(7311622-7311690)
chr5 (155-258)||(20214196-20214298)
chr5 (196-261)||(25524093-25524158)
chr5 (179-231)||(2685768-2685820)
chr5 (197-249)||(5962579-5962631)
chr5 (155-249)||(18154494-18154586)
chr5 (155-251)||(5777901-5777995)
chr5 (158-250)||(2186774-2186865)
chr5 (205-261)||(16650042-16650098)
chr5 (183-250)||(2686407-2686474)
chr5 (155-261)||(18485138-18485251)
chr5 (155-245)||(33158098-33158188)
chr5 (158-248)||(38834090-38834179)
chr5 (178-258)||(1797295-1797375)
chr5 (155-230)||(5730441-5730517)
chr5 (187-247)||(5730871-5730931)
chr5 (206-258)||(21835091-21835143)
chr5 (179-231)||(1016888-1016940)
[»] chr2 (39 HSPs)
chr2 (155-251)||(7899887-7899983)
chr2 (155-261)||(23869530-23869635)
chr2 (155-251)||(38840498-38840594)
chr2 (155-261)||(18299373-18299479)
chr2 (155-258)||(22848191-22848294)
chr2 (155-251)||(38839242-38839338)
chr2 (155-258)||(36449778-36449881)
chr2 (155-261)||(18905983-18906088)
chr2 (155-249)||(41879219-41879313)
chr2 (158-259)||(26544152-26544252)
chr2 (155-261)||(18904367-18904473)
chr2 (155-261)||(22587949-22588054)
chr2 (155-251)||(11258816-11258912)
chr2 (158-258)||(36450919-36451018)
chr2 (155-258)||(11938787-11938889)
chr2 (156-261)||(13030293-13030395)
chr2 (158-251)||(7898694-7898787)
chr2 (155-250)||(1034475-1034570)
chr2 (155-261)||(18797246-18797353)
chr2 (155-251)||(41878092-41878190)
chr2 (155-231)||(18868924-18869000)
chr2 (187-261)||(22587533-22587606)
chr2 (187-261)||(28617954-28618027)
chr2 (155-248)||(13570565-13570658)
chr2 (155-231)||(24476869-24476943)
chr2 (155-259)||(802588-802691)
chr2 (156-261)||(18300720-18300822)
chr2 (187-261)||(24475256-24475330)
chr2 (155-251)||(11257622-11257717)
chr2 (156-251)||(1033212-1033305)
chr2 (155-258)||(1093144-1093246)
chr2 (196-255)||(18869164-18869223)
chr2 (158-231)||(8534586-8534658)
chr2 (158-258)||(8535654-8535752)
chr2 (158-231)||(13567975-13568048)
chr2 (187-259)||(810778-810850)
chr2 (155-231)||(16446154-16446230)
chr2 (187-238)||(32739655-32739706)
chr2 (196-258)||(1091736-1091798)
[»] chr8 (49 HSPs)
chr8 (155-261)||(30335639-30335745)
chr8 (157-261)||(43661267-43661371)
chr8 (155-261)||(10007758-10007864)
chr8 (160-261)||(1824073-1824174)
chr8 (160-261)||(1858518-1858619)
chr8 (158-251)||(29968342-29968434)
chr8 (155-259)||(1823552-1823656)
chr8 (155-259)||(1857997-1858101)
chr8 (155-261)||(5513982-5514087)
chr8 (155-261)||(10006344-10006450)
chr8 (155-261)||(22220388-22220494)
chr8 (155-261)||(22221359-22221465)
chr8 (155-261)||(22227701-22227807)
chr8 (155-251)||(12353366-12353460)
chr8 (164-258)||(18978029-18978122)
chr8 (156-258)||(18979118-18979220)
chr8 (155-261)||(43661818-43661924)
chr8 (158-247)||(8389698-8389787)
chr8 (155-250)||(12351921-12352016)
chr8 (158-243)||(11287779-11287864)
chr8 (158-247)||(40471156-40471244)
chr8 (155-257)||(8388464-8388564)
chr8 (155-249)||(24122883-24122976)
chr8 (155-261)||(30336496-30336602)
chr8 (158-258)||(11282011-11282111)
chr8 (164-258)||(18970920-18971013)
chr8 (187-261)||(24123893-24123967)
chr8 (155-255)||(42982658-42982758)
chr8 (155-261)||(32207320-32207424)
chr8 (155-261)||(5514266-5514370)
chr8 (158-259)||(24361191-24361290)
chr8 (157-261)||(29043400-29043504)
chr8 (155-231)||(45114541-45114617)
chr8 (182-261)||(18488257-18488336)
chr8 (214-261)||(24359866-24359913)
chr8 (158-261)||(30570251-30570353)
chr8 (155-221)||(23170034-23170098)
chr8 (155-261)||(30568887-30568992)
chr8 (155-212)||(24483143-24483200)
chr8 (155-258)||(11283207-11283310)
chr8 (219-261)||(2379919-2379961)
chr8 (155-204)||(36249552-36249601)
chr8 (155-211)||(11456638-11456694)
chr8 (155-259)||(32968456-32968560)
chr8 (215-247)||(34625209-34625241)
chr8 (155-251)||(38974795-38974891)
chr8 (155-251)||(38980049-38980145)
chr8 (155-251)||(39005893-39005989)
chr8 (155-251)||(39011146-39011242)
[»] chr4 (46 HSPs)
chr4 (155-261)||(1290193-1290299)
chr4 (157-251)||(19750580-19750673)
chr4 (157-251)||(19789133-19789226)
chr4 (155-258)||(1963196-1963299)
chr4 (158-261)||(12129626-12129729)
chr4 (165-261)||(21539066-21539162)
chr4 (155-251)||(52491612-52491708)
chr4 (155-258)||(31599789-31599892)
chr4 (155-258)||(31600983-31601086)
chr4 (155-261)||(1835097-1835203)
chr4 (155-251)||(10471393-10471489)
chr4 (158-250)||(35935539-35935631)
chr4 (155-261)||(1834119-1834226)
chr4 (158-249)||(8758844-8758935)
chr4 (155-261)||(10447006-10447113)
chr4 (155-257)||(1964440-1964542)
chr4 (155-251)||(17388216-17388311)
chr4 (155-251)||(48780248-48780344)
chr4 (155-251)||(49308033-49308127)
chr4 (155-258)||(17382993-17383095)
chr4 (158-261)||(8155741-8155843)
chr4 (155-251)||(8757675-8757770)
chr4 (155-251)||(25685827-25685923)
chr4 (155-254)||(26421624-26421722)
chr4 (155-269)||(13509346-13509459)
chr4 (155-251)||(10470546-10470642)
chr4 (155-251)||(25684934-25685030)
chr4 (155-261)||(10448255-10448361)
chr4 (155-251)||(5526131-5526226)
chr4 (158-261)||(1289100-1289203)
chr4 (179-261)||(33296247-33296329)
chr4 (158-251)||(35934347-35934438)
chr4 (176-258)||(46638723-46638805)
chr4 (155-250)||(13386014-13386111)
chr4 (155-251)||(5525360-5525455)
chr4 (155-251)||(48781051-48781146)
chr4 (155-261)||(50909667-50909774)
chr4 (155-258)||(21177997-21178099)
chr4 (155-251)||(13386537-13386634)
chr4 (175-256)||(27257960-27258041)
chr4 (155-259)||(3927666-3927770)
chr4 (155-259)||(3928855-3928959)
chr4 (158-238)||(55603549-55603628)
chr4 (183-249)||(37728572-37728638)
chr4 (158-239)||(55602379-55602459)
chr4 (213-261)||(54110623-54110671)
[»] chr1 (49 HSPs)
chr1 (155-261)||(51684366-51684472)
chr1 (155-261)||(11437194-11437300)
chr1 (155-251)||(24422800-24422896)
chr1 (155-250)||(36613910-36614005)
chr1 (155-261)||(39222468-39222575)
chr1 (155-261)||(11436042-11436148)
chr1 (158-251)||(24426080-24426173)
chr1 (155-258)||(35067000-35067103)
chr1 (155-250)||(39698563-39698657)
chr1 (155-250)||(52274968-52275063)
chr1 (155-261)||(45148581-45148686)
chr1 (155-259)||(23980463-23980567)
chr1 (155-251)||(39699772-39699867)
chr1 (155-251)||(52827347-52827443)
chr1 (158-261)||(39153111-39153214)
chr1 (158-261)||(43058789-43058891)
chr1 (158-261)||(50680335-50680437)
chr1 (155-261)||(35594217-35594321)
chr1 (155-261)||(36612853-36612958)
chr1 (155-261)||(51685760-51685866)
chr1 (158-261)||(45149965-45150068)
chr1 (158-261)||(43378708-43378810)
chr1 (179-261)||(25652738-25652820)
chr1 (155-261)||(44404442-44404548)
chr1 (155-261)||(45157204-45157309)
chr1 (158-251)||(52828075-52828168)
chr1 (158-261)||(37526873-37526975)
chr1 (155-261)||(7675454-7675559)
chr1 (155-264)||(46066525-46066631)
chr1 (158-247)||(45156052-45156141)
chr1 (155-231)||(7674528-7674602)
chr1 (155-231)||(11190385-11190461)
chr1 (155-231)||(14999285-14999360)
chr1 (155-251)||(41364829-41364924)
chr1 (190-258)||(44411964-44412032)
chr1 (155-258)||(12389980-12390082)
chr1 (155-258)||(14999953-15000056)
chr1 (155-258)||(33088615-33088718)
chr1 (158-261)||(39151934-39152037)
chr1 (155-261)||(43060001-43060107)
chr1 (197-251)||(52276168-52276222)
chr1 (155-228)||(50681632-50681705)
chr1 (155-251)||(41366136-41366231)
chr1 (178-261)||(40384748-40384831)
chr1 (155-261)||(35595187-35595294)
chr1 (187-257)||(33088099-33088169)
chr1 (158-247)||(7983053-7983141)
chr1 (213-261)||(30249485-30249533)
chr1 (156-248)||(43377721-43377813)
[»] scaffold0019 (2 HSPs)
scaffold0019 (156-261)||(61454-61559)
scaffold0019 (155-261)||(60090-60196)
[»] chr3 (54 HSPs)
chr3 (155-258)||(54540788-54540891)
chr3 (158-261)||(23770402-23770505)
chr3 (155-258)||(29931226-29931329)
chr3 (155-258)||(29980380-29980483)
chr3 (155-261)||(7758402-7758508)
chr3 (156-250)||(8456479-8456572)
chr3 (158-250)||(7267647-7267738)
chr3 (155-259)||(22776809-22776913)
chr3 (155-259)||(46719941-46720045)
chr3 (155-258)||(54539755-54539858)
chr3 (155-251)||(51469972-51470068)
chr3 (155-261)||(19984849-19984955)
chr3 (187-261)||(31645005-31645079)
chr3 (155-251)||(535787-535883)
chr3 (155-259)||(46721217-46721321)
chr3 (155-258)||(29932697-29932799)
chr3 (155-258)||(29981851-29981953)
chr3 (155-261)||(534499-534605)
chr3 (155-261)||(47614185-47614291)
chr3 (155-261)||(49216247-49216353)
chr3 (155-259)||(8875906-8876010)
chr3 (155-250)||(12700175-12700268)
chr3 (155-251)||(47609697-47609793)
chr3 (155-231)||(51038815-51038891)
chr3 (155-258)||(51037536-51037638)
chr3 (155-258)||(53614819-53614921)
chr3 (155-261)||(12703495-12703600)
chr3 (159-249)||(24516464-24516554)
chr3 (155-261)||(19986065-19986173)
chr3 (158-251)||(47610585-47610678)
chr3 (155-258)||(55191993-55192095)
chr3 (158-248)||(7268835-7268924)
chr3 (155-261)||(23769857-23769962)
chr3 (175-261)||(34019140-34019226)
chr3 (155-251)||(52840609-52840705)
chr3 (158-258)||(53616014-53616114)
chr3 (155-213)||(47615591-47615649)
chr3 (164-248)||(6170281-6170363)
chr3 (160-261)||(6250572-6250672)
chr3 (155-251)||(5029688-5029783)
chr3 (158-258)||(51347271-51347371)
chr3 (155-230)||(5001200-5001275)
chr3 (155-249)||(51470462-51470555)
chr3 (164-232)||(6249618-6249686)
chr3 (155-251)||(28263116-28263212)
chr3 (158-249)||(40426785-40426877)
chr3 (158-258)||(49398130-49398229)
chr3 (197-261)||(54654301-54654365)
chr3 (158-261)||(54987002-54987103)
chr3 (155-258)||(4271440-4271543)
chr3 (177-248)||(11670406-11670477)
chr3 (155-241)||(53901403-53901487)
chr3 (208-261)||(52104530-52104583)
chr3 (225-261)||(47615572-47615608)
[»] chr7 (30 HSPs)
chr7 (155-261)||(18371424-18371530)
chr7 (155-258)||(127337-127438)
chr7 (155-261)||(22629483-22629592)
chr7 (155-250)||(22630458-22630553)
chr7 (158-261)||(42886281-42886384)
chr7 (155-261)||(7500455-7500560)
chr7 (179-261)||(18372452-18372534)
chr7 (155-251)||(31659622-31659719)
chr7 (155-251)||(31949322-31949418)
chr7 (155-247)||(34352795-34352887)
chr7 (155-261)||(7501847-7501953)
chr7 (160-261)||(14999150-14999249)
chr7 (157-251)||(17781663-17781757)
chr7 (155-251)||(3227599-3227695)
chr7 (155-251)||(17782558-17782654)
chr7 (156-251)||(3227109-3227203)
chr7 (155-258)||(48934901-48935004)
chr7 (155-261)||(769413-769519)
chr7 (155-261)||(47369781-47369887)
chr7 (155-256)||(11658379-11658480)
chr7 (155-251)||(31949807-31949903)
chr7 (158-258)||(11662549-11662649)
chr7 (155-227)||(20163585-20163657)
chr7 (155-251)||(47525372-47525468)
chr7 (155-261)||(21505416-21505520)
chr7 (155-258)||(30439356-30439458)
chr7 (158-251)||(128606-128699)
chr7 (162-229)||(47524532-47524599)
chr7 (223-261)||(14998048-14998086)
chr7 (155-229)||(34174010-34174083)
[»] scaffold0302 (2 HSPs)
scaffold0302 (155-258)||(17470-17573)
scaffold0302 (155-251)||(18781-18877)
[»] chr6 (28 HSPs)
chr6 (158-261)||(1829598-1829701)
chr6 (155-258)||(10784592-10784696)
chr6 (155-261)||(7316289-7316395)
chr6 (155-248)||(14822360-14822453)
chr6 (155-231)||(16704522-16704598)
chr6 (155-261)||(7314880-7314985)
chr6 (155-248)||(14823583-14823677)
chr6 (158-258)||(5658759-5658859)
chr6 (155-251)||(8659265-8659361)
chr6 (155-258)||(8822791-8822894)
chr6 (155-249)||(8821873-8821967)
chr6 (183-258)||(10785911-10785986)
chr6 (155-258)||(27437828-27437931)
chr6 (155-257)||(27322067-27322168)
chr6 (156-261)||(12382706-12382811)
chr6 (155-258)||(3333024-3333127)
chr6 (155-233)||(6842306-6842384)
chr6 (155-249)||(8660211-8660304)
chr6 (160-258)||(29473082-29473180)
chr6 (155-247)||(16703570-16703659)
chr6 (158-251)||(34834584-34834677)
chr6 (155-251)||(3721612-3721708)
chr6 (187-247)||(26575063-26575123)
chr6 (189-256)||(12350832-12350898)
chr6 (155-258)||(26574619-26574721)
chr6 (155-204)||(27447965-27448014)
chr6 (155-258)||(30495695-30495797)
chr6 (155-230)||(3722533-3722608)
[»] scaffold0320 (1 HSPs)
scaffold0320 (155-261)||(19488-19594)
[»] scaffold2034 (2 HSPs)
scaffold2034 (155-259)||(233-337)
scaffold2034 (176-259)||(975-1058)
[»] scaffold0294 (2 HSPs)
scaffold0294 (155-251)||(5443-5539)
scaffold0294 (155-251)||(4442-4538)
[»] scaffold0586 (1 HSPs)
scaffold0586 (158-261)||(6346-6449)
[»] scaffold1303 (1 HSPs)
scaffold1303 (155-261)||(1439-1545)
[»] scaffold0045 (1 HSPs)
scaffold0045 (155-231)||(49109-49185)
[»] scaffold0632 (1 HSPs)
scaffold0632 (155-258)||(3306-3408)
[»] scaffold0112 (1 HSPs)
scaffold0112 (155-251)||(37148-37243)
[»] scaffold0003 (2 HSPs)
scaffold0003 (155-258)||(49431-49534)
scaffold0003 (155-204)||(39344-39393)
[»] scaffold0093 (2 HSPs)
scaffold0093 (156-249)||(2472-2564)
scaffold0093 (156-249)||(7095-7187)
[»] scaffold0049 (2 HSPs)
scaffold0049 (155-258)||(7413-7516)
scaffold0049 (206-250)||(7588-7632)
[»] scaffold0059 (2 HSPs)
scaffold0059 (187-250)||(3707-3770)
scaffold0059 (156-231)||(4755-4829)
[»] scaffold0186 (1 HSPs)
scaffold0186 (155-251)||(23081-23175)
[»] scaffold0227 (1 HSPs)
scaffold0227 (155-251)||(124-220)


Alignment Details
Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 2152123 - 2152226
Alignment:
Q  37 gtccctttgatttctacaattaagttctttgacaa--tattctaaaggctgtggttttattgggacatgccgttctgtggcagcttgggggagaattgag 134  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2152123 gtccctttgatttctacaattaagttctttgacaaaatattctaaaggctgtggttttattgggacatgccgttctgtggcagcttgggggagaattgag 2152222  T
Q  135 caaa 138  Q
    ||||    
T  2152223 caaa 2152226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 16650956 - 16650850
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16650956 ggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcccatt 16650857  T
Q  255 tgcatct 261  Q
    |||||||    
T  16650856 tgcatct 16650850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 28538676 - 28538779
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  28538676 ggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccctt 28538775  T
Q  255 tgca 258  Q
    ||||    
T  28538776 tgca 28538779  T

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Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 25523069 - 25523175
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||| | ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  25523069 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccctt 25523168  T
Q  255 tgcatct 261  Q
    |||||||    
T  25523169 tgcatct 25523175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 18487003 - 18486897
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||| || ||||||| ||| |||||||| ||||||||| |||||||||| | |||| |||||||| ||||||||||||||||||| ||    
T  18487003 ggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccctt 18486904  T
Q  255 tgcatct 261  Q
    |||||||    
T  18486903 tgcatct 18486897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 19752912 - 19753017
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| |||| || ||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||  |    
T  19752912 ggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccat 19753010  T
Q  255 tgcatct 261  Q
    |||||||    
T  19753011 tgcatct 19753017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 40255773 - 40255681
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagattta 247  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||||  ||||||| |||| ||||||||||||| |||||||||||||||    
T  40255773 ggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagattta 40255681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 33160387 - 33160288
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||| | |||||||||| | |||||||||||||  |||| ||||||||||||||||    
T  33160387 ggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttagcccatt 33160288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 22940723 - 22940618
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||| |||||||||||||||| ||||||||| | ||||||| ||||||||| ||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaatttt-gacccctaaaatttagcccctt 22940625  T
Q  255 tgcatct 261  Q
    | |||||    
T  22940624 ttcatct 22940618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 20216861 - 20216761
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||| |  |||||  |||||||||||||||||| |||||| |||| |||||||||||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccatttgc 20216762  T
Q  258 a 258  Q
    |    
T  20216761 a 20216761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 36486589 - 36486486
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||| |||||||||||| | ||| ||| |||||||||||| ||||||||  |||||||||||||||||||||||||| | |||||||||||||| || ||    
T  36486589 ggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccctt 36486490  T
Q  255 tgca 258  Q
    ||||    
T  36486489 tgca 36486486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 25055412 - 25055518
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| ||   ||| |||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  25055412 ggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcccatt 25055511  T
Q  255 tgcatct 261  Q
    |||||||    
T  25055512 tgcatct 25055518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 24332916 - 24333019
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||| | ||||||| ||| |||||||| ||||||||| ||| || |||||||||||||||||||  ||| |||||||||| ||| |||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 24333015  T
Q  258 atct 261  Q
    ||||    
T  24333016 atct 24333019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 25056482 - 25056387
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    ||||||||||||||||||||| | ||| ||| |||||||| ||||||||  ||||||||||  ||||||||||||||  |||||||||||||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 25056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 42196301 - 42196195
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||| || ||| ||| ||||||||| ||   | ||||| || ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  42196301 ggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagcccatt 42196202  T
Q  255 tgcatct 261  Q
    |||||||    
T  42196201 tgcatct 42196195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 36485302 - 36485403
Alignment:
Q  157 ctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttg 256  Q
    |||||||||| |||||||||| ||| ||| |||||||| ||||||||  | | ||||||||||||||| |||||| ||||||||||||||| ||| ||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttg 36485401  T
Q  257 ca 258  Q
    ||    
T  36485402 ca 36485403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 25524229 - 25524141
Alignment:
Q  155 ggctaaagtgcacttttccaccct-taatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaag 242  Q
    ||||||||||||||||||| |||  ||||||||||||| ||  |||||||| |||||||||||||||||||||||||| ||| ||||||    
T  25524229 ggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttggcctcctaag 25524141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 28539917 - 28539818
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||| |||||| |||| || |||||||||||| ||||||||  || ||||||||||||||||||||||| | |||||||||||||| || |||||    
T  28539917 taaagtgcatttttcccccct-aacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgc 28539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 1796054 - 1796157
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| |||||||||| ||| ||| |||||||| ||| ||||| | ||||||||||||||||||||||||   |||| |||| ||| ||||||    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttgatcccccaagaattaacccatt 1796153  T
Q  255 tgca 258  Q
    ||||    
T  1796154 tgca 1796157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 19754232 - 19754125
Alignment:
Q  155 ggctaaagtgcacttttc-cacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccat 253  Q
    |||||||||||| ||||  | ||| ||| ||| |||||||| ||||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||      
T  19754232 ggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagcccca 19754133  T
Q  254 ttgcatct 261  Q
    ||||||||    
T  19754132 ttgcatct 19754125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 42195137 - 42195238
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||| ||||||| ||| ||||| || | ||||||| |||||| |||||||| |||||||||| | ||||||||||||||||| |||||    
T  42195137 taaagtgcacttttcc-cccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgc 42195234  T
Q  258 atct 261  Q
    ||||    
T  42195235 atct 42195238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 1015492 - 1015588
Alignment:
Q  163 tgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcat 259  Q
    ||||||||||| ||| ||| ||||||||| || ||||||||| |||||  |||||||| ||||||||||| |||||||||| |||| || |||||||    
T  1015492 tgcacttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaattagtccctttgcat 1015588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 5778937 - 5778841
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||| | ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  5778937 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 5778841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 7311622 - 7311690
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccattt 255  Q
    |||||||| |||| |||| | || |||||||||||||||||||||||||||||||||||||||| ||||    
T  7311622 aaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagatttagccaattt 7311690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 20214196 - 20214298
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||| |  | ||| ||||||||||||||||||| |||||  |||| ||| ||||||    
T  20214196 ggctaaagtgcacttttcc-cccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccctcaagaattatcccatt 20214294  T
Q  255 tgca 258  Q
    ||||    
T  20214295 tgca 20214298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 25524158 - 25524093
Alignment:
Q  196 caattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||||| | ||||||||||||||||| ||||||  |||||||||||||||||| |||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatct 25524093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 2685768 - 2685820
Alignment:
Q  179 taatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||||    
T  2685768 taattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 5962631 - 5962579
Alignment:
Q  197 aattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  5962631 aattttggtcccctaagtacaaaaactataattttagccacctaatatttagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 18154494 - 18154586
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    |||||||||| ||||||   ||||||| ||| |||||||| ||||||||  |||||||||||||||||||||||||| |||| |||| |||||||    
T  18154494 ggctaaagtgaacttttttccccttaactttcaaaaacttacaattttga-cccctaagtacaaaaactacaatttt-gccctctaaaatttagc 18154586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 5777901 - 5777995
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||||||| || ||  ||| ||| |||||||| ||||||||  ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  5777901 ggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 5777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 2186774 - 2186865
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    ||||||||| |||| | |||| || ||| ||||| || |||||||||||  ||| ||||||||||||||||||||  ||||||||||||||||    
T  2186774 taaagtgcattttttccccct-aagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagcc 2186865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 16650042 - 16650098
Alignment:
Q  205 tcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    |||||||||||||||||||||||||||  ||| |||||||||| ||| |||||||||    
T  16650042 tcccctaagtacaaaaactacaattttgaccctctaagatttaacccctttgcatct 16650098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 2686474 - 2686407
Alignment:
Q  183 ttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||||||||| |||||||| || | ||||||||||||||| |||||| | |||||| |||||||||    
T  2686474 ttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttggtcccctatgatttagcc 2686407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 18485138 - 18485251
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaa-------ttttagccccctaagattta 247  Q
    ||||||||||||||||| | ||  ||| ||| |||||||| ||||||||| ||||||||||  ||||| ||||       |||| |||||||||||||||    
T  18485138 ggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgggttttggccccctaagattta 18485237  T
Q  248 gcccatttgcatct 261  Q
    |||| |||||||||    
T  18485238 gcccctttgcatct 18485251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 33158098 - 33158188
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatt 245  Q
    |||||||||||| ||||   ||| ||| ||| |||||||| ||||||||   |||||||||||||||||||||||||  |||| |||||||    
T  33158098 ggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgaccccttaagatt 33158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 38834090 - 38834179
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttag 248  Q
    ||||||||| ||||   ||||||| ||||||||| || | ||||||  ||| || |||||||||||||||||||||| |||||||||||||    
T  38834090 taaagtgcatttttttccccttaacttttaaaaagttgcgattttga-cccttatgtacaaaaactacaattttagctccctaagatttag 38834179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 1797375 - 1797295
Alignment:
Q  178 ttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgca 258  Q
    |||| |||||||||||| |||||||||  || ||   ||||||||||||||||| | ||| ||||||||||||| ||||||    
T  1797375 ttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagcccctttgca 1797295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 5730441 - 5730517
Alignment:
Q  155 ggctaaagtgcactttt-ccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattt 230  Q
    ||||||||||||||||| || ||||||| ||| |||||||| |||||||||   ||||||||| ||||| |||||||    
T  5730441 ggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 5730931 - 5730871
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagattta 247  Q
    |||||||| ||||||||| ||||||||||| ||||| |||||||   ||||||||||||||    
T  5730931 aaaaacttccaattttggccccctaagtaccaaaaccacaatttagtccccctaagattta 5730871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 21835091 - 21835143
Alignment:
Q  206 cccctaagtacaaaaactacaattttagccccctaagatttagcccatttgca 258  Q
    |||||| |||||||||||||||||||  |||||||||||||| ||| ||||||    
T  21835091 cccctatgtacaaaaactacaattttgaccccctaagatttaacccctttgca 21835143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 1016940 - 1016888
Alignment:
Q  179 taatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||||||||||| ||  ||||||||||  ||| |||||||||||||||||||    
T  1016940 taatttttaaaaaattgtaattttggtcttctatgtacaaaaactacaatttt 1016888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 7899983 - 7899887
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7899983 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagccc 7899887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 23869635 - 23869530
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||    
T  23869635 ggctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccctt 23869537  T
Q  255 tgcatct 261  Q
    |||||||    
T  23869536 tgcatct 23869530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 38840594 - 38840498
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  38840594 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagccc 38840498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 18299373 - 18299479
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||| ||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagcccttt 18299472  T
Q  255 tgcatct 261  Q
    |||||||    
T  18299473 tgcatct 18299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 22848191 - 22848294
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | ||| ||| ||| |||||||| ||||||||||||||||| |||||||||||||||||| || |||||||||||||||| ||    
T  22848191 ggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccctt 22848290  T
Q  255 tgca 258  Q
    ||||    
T  22848291 tgca 22848294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 38839242 - 38839338
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||| |||| | ||||||||||| |||||||| ||||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  38839242 ggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagccc 38839338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 36449778 - 36449881
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||  ||||| |||| |||| || ||    
T  36449778 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaattaggccctt 36449877  T
Q  255 tgca 258  Q
    ||||    
T  36449878 tgca 36449881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 18906088 - 18905983
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| |   ||| ||| |||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  18906088 ggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttag-cccctaagatttagctcatt 18905990  T
Q  255 tgcatct 261  Q
    |||||||    
T  18905989 tgcatct 18905983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 41879313 - 41879219
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    ||||||||| ||||||| | ||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| |||||||| |||||||    
T  41879313 ggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagc 41879219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 26544152 - 26544252
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||||||||| |||| ||||||||||||| || |||||||||| || ||||||||||||||||| |||||||| ||||||||||||| | |||||    
T  26544152 taaagtgcacttttctacccctaatttttaaaaatttacaattttggttcc-taagtacaaaaactacagttttagcctcctaagatttagcacctttgc 26544250  T
Q  258 at 259  Q
    ||    
T  26544251 at 26544252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 18904367 - 18904473
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||||| | ||||||||| ||| |||||||||||||||||||||| |  |||||||| ||||||| ||    
T  18904367 ggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagcccctt 18904466  T
Q  255 tgcatct 261  Q
    | |||||    
T  18904467 tacatct 18904473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 22588054 - 22587949
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| |||||| | | ||| ||| |||||||| ||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||| ||    
T  22588054 ggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttgg-cccctatgtacaaaaactacaattttggccccttaagatttagcccctt 22587956  T
Q  255 tgcatct 261  Q
    |||||||    
T  22587955 tgcatct 22587949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 11258912 - 11258816
Alignment:
Q  155 ggctaaagtgcacttttccaccct-taatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||| |||||| | || ||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  11258912 ggctaaagtgca-ttttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccc 11258816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 36451018 - 36450919
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||| ||||||| ||| |||||||| |||||||||||||||||||||| ||||||||||||  |||||| |||| ||||| | |||||    
T  36451018 taaagtgcacttttcc-cccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcctttgc 36450920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 11938889 - 11938787
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||||||| |||||||||||||| || ||||||  |||||||||| ||||| | ||    
T  11938889 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgcccccctaagaattagctcttt 11938791  T
Q  255 tgca 258  Q
    ||||    
T  11938790 tgca 11938787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 13030293 - 13030395
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccattt 255  Q
    |||||||||||||||||| ||  ||| ||| ||||||||  |||||||| |||||||||||||||| ||||||||| ||||||||||||||||| | |||    
T  13030293 gctaaagtgcacttttccccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttttgccccctaagatttagctctttt 13030389  T
Q  256 gcatct 261  Q
    ||||||    
T  13030390 gcatct 13030395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 7898694 - 7898787
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||||||  ||||||| ||| |||||||| ||||||| | | |||||||| | ||||||||||||| |||||||||||||||||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagccc 7898787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 1034570 - 1034475
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    ||||||||||||||||||| ||||||| ||| |||||| | ||||||||| |||||| |||| ||||| |||||||   |||||||||||||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagatttagcc 1034475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 18797246 - 18797353
Alignment:
Q  155 ggctaaagtgcacttttccaccct-taatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccat 253  Q
    |||||||||||||||||||||||  ||| ||| |||||||| ||||||||  ||| ||||||  ||||||||||||||  |||||||| ||||||||| |    
T  18797246 ggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccct 18797345  T
Q  254 ttgcatct 261  Q
    ||||||||    
T  18797346 ttgcatct 18797353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 41878092 - 41878190
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaacttt---caattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||||||| || ||||||| ||| ||||||| |   ||||||||| |||||||||||| ||||||||||||| ||||| |||||||||||||    
T  41878092 ggctaaagtgcactttccc-cccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagccc 41878190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 18868924 - 18869000
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    |||||||||| |||||||||||| ||| ||| |||||||| ||||||||| | ||||| ||||||||||||||||||    
T  18868924 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaatttt 18869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 22587533 - 22587606
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||| || ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||  |||||||||    
T  22587533 aaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagcctctttgcatct 22587606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 28617954 - 28618027
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    |||| ||| ||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  28617954 aaaatcttgcaattttggccccccaagtacaaaaacttcaatttt-gccccctaagatttagcccctttgcatct 28618027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 13570658 - 13570565
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttag 248  Q
    |||||||||||| ||||| |||| ||| ||| |||||||| ||||||| ||||| ||||||||||||||| |||||| | |||| |||| ||||    
T  13570658 ggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtcccccaagaattag 13570565  T

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Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 24476943 - 24476869
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||| ||||||||||| | |||  || ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  24476943 ggctagagtgcactttttccccc--aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaatttt 24476869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 802691 - 802588
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| |||||||| |||| || ||| |||||||| ||||||||| |||||  |||||||||||||||||||  ||| |||||||||  ||| ||    
T  802691 ggctaaagtgtacttttcccccct-aagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctt 802593  T
Q  255 tgcat 259  Q
    |||||    
T  802592 tgcat 802588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 18300822 - 18300720
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccattt 255  Q
    |||||| ||||||||||| ||  ||| ||| | |||||| ||||||||  |||||||||||||||||||||||||| | ||||||  ||||||||| |||    
T  18300822 gctaaattgcacttttccccc--taactttcataaacttgcaattttgaccccctaagtacaaaaactacaatttt-gacccctataatttagccccttt 18300726  T
Q  256 gcatct 261  Q
    ||||||    
T  18300725 gcatct 18300720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 24475256 - 24475330
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||||  |||||| | |||||||||| ||||||||||||||| ||||||||  ||||||| |||||||||||    
T  24475256 aaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagctcatttgcatct 24475330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 11257622 - 11257717
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||| | ||  ||| ||| |||||||| |||||||    ||||||||| ||||||||||||||| ||| |||||||||||||||    
T  11257622 ggctaaagtgcacttttactcctctaactttcaaaaacttgcaatttt-aaaccctaagtataaaaactacaattttggcctcctaagatttagccc 11257717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 1033212 - 1033305
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||| |||||||| |||| || |||||||||||| ||||||||| ||||||| ||| |||| || ||||| | ||| ||||||||||||||    
T  1033212 gctaaagtgtacttttcccccct-aacttttaaaaacttgcaattttgg-cccctaaataccaaaattataatttaacccctctaagatttagccc 1033305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 1093246 - 1093144
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| | |||||| ||||||| ||||||||  || ||||| || | |||||  |||||||| |||||||||| ||| |||||||||||||| ||    
T  1093246 ggctaaagtgta-ttttccccccttaacttttaaaatgttgcaattgtgattccctatatacaaaaattacaattttaacccgctaagatttagcccctt 1093148  T
Q  255 tgca 258  Q
    ||||    
T  1093147 tgca 1093144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 18869223 - 18869164
Alignment:
Q  196 caattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccattt 255  Q
    ||||||||| |  |||||||||||||||||||||||   |||||||||||||||||||||    
T  18869223 caattttggccttctaagtacaaaaactacaatttttatcccctaagatttagcccattt 18869164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 8534586 - 8534658
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    |||||||| ||||||| ||||||||||| |||||||| |||||||| |||  |||||| | |||||||||||||    
T  8534586 taaagtgctcttttcc-cccttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaatttt 8534658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 8535752 - 8535654
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||| ||||||||| ||  ||| ||||||||||||  ||||||| |||  |||||| | |||||||||||||  |||||||||| ||||||| |||||    
T  8535752 taaagtacacttttcctcc--taacttttaaaaacttgtaattttgatcctttaagtagagaaactacaattttgaccccctaagaattagcccctttgc 8535655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 13567975 - 13568048
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||||| |||||||| |   ||| ||| |||||||| ||||||||| ||||||| ||||||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaatttt 13568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 810850 - 810778
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcat 259  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||  ||| |||||||||  ||| |||||||    
T  810850 aaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcat 810778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 16446154 - 16446230
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    |||||||||||| ||||| |||||||| ||| |||||||| |||||||   | | ||| ||||||||||||||||||    
T  16446154 ggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaatttt 16446230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 32739655 - 32739706
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccc 238  Q
    |||||||| ||||||||| ||| || ||||||||||||||||||| ||||||    
T  32739655 aaaaacttgcaattttggccccttatgtacaaaaactacaattttggccccc 32739706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 1091736 - 1091798
Alignment:
Q  196 caattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgca 258  Q
    |||||||||||| ||| ||| |||| ||||||||||  |||| |||||||||||| |||||||    
T  1091736 caattttggtcctctatgtataaaagctacaattttgaccccttaagatttagcctatttgca 1091798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 30335639 - 30335745
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| |||||||||||||| |||||||||||| |||||||||  | ||||||||||||| |||||||||| |||||||||||||||||| ||    
T  30335639 ggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcccctt 30335738  T
Q  255 tgcatct 261  Q
    |||||||    
T  30335739 tgcatct 30335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 43661267 - 43661371
Alignment:
Q  157 ctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttg 256  Q
    |||||||||||||||| |||||||||||| ||||| || ||||||||||||| || |||||||||||| |||||| ||||||||||||||||||| ||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttg 43661366  T
Q  257 catct 261  Q
    |||||    
T  43661367 catct 43661371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 10007864 - 10007758
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||| |||||||||| | |||| |||||||| | ||||||||||||||||| ||    
T  10007864 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcccctt 10007765  T
Q  255 tgcatct 261  Q
    |||||||    
T  10007764 tgcatct 10007758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 1824174 - 1824073
Alignment:
Q  160 aagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcat 259  Q
    ||||||| |||||| ||  ||| ||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1824075  T
Q  260 ct 261  Q
    ||    
T  1824074 ct 1824073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 1858619 - 1858518
Alignment:
Q  160 aagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcat 259  Q
    ||||||| |||||| ||  ||| ||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1858520  T
Q  260 ct 261  Q
    ||    
T  1858519 ct 1858518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 29968434 - 29968342
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||||||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| | | |||||||||||||||||    
T  29968434 taaagtgcacttttcc-cccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagccc 29968342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 1823552 - 1823656
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| |||||| | ||||||| |||||||||||| ||||||||  || ||||||||||||||||||||||  | ||||||||||||||||||||    
T  1823552 ggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatt 1823651  T
Q  255 tgcat 259  Q
    |||||    
T  1823652 tgcat 1823656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 1857997 - 1858101
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| |||||| | ||||||| |||||||||||| ||||||||  || ||||||||||||||||||||||  | ||||||||||||||||||||    
T  1857997 ggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatt 1858096  T
Q  255 tgcat 259  Q
    |||||    
T  1858097 tgcat 1858101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 5513982 - 5514087
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | |||| || ||| |||||||| ||||||||| ||||||||||||||||||||||||||  |||||||| ||||||||| ||    
T  5513982 ggctaaagtgcacttttaccccct-aactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcccctt 5514080  T
Q  255 tgcatct 261  Q
    |||||||    
T  5514081 tgcatct 5514087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 10006344 - 10006450
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||  ||||| |||||||| ||||||||||||||||||| ||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcccctt 10006443  T
Q  255 tgcatct 261  Q
    |||||||    
T  10006444 tgcatct 10006450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 22220388 - 22220494
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| ||| |||| ||||||||  |||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccatt 22220487  T
Q  255 tgcatct 261  Q
    |||||||    
T  22220488 tgcatct 22220494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 22221465 - 22221359
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||||  ||||||||||  ||||||||||||||  |||||||||||||||||| ||    
T  22221465 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 22221366  T
Q  255 tgcatct 261  Q
    | |||||    
T  22221365 tacatct 22221359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 22227807 - 22227701
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||||  ||||||||||  ||||||||||||||  |||||||||||||||||| ||    
T  22227807 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 22227708  T
Q  255 tgcatct 261  Q
    | |||||    
T  22227707 tacatct 22227701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 12353460 - 12353366
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||    
T  12353460 ggctaaagtgcacttttcc-cccttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggccccctaagatttagccc 12353366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 258
Target Start/End: Original strand, 18978029 - 18978122
Alignment:
Q  164 gcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgca 258  Q
    |||||||||| |||| || ||| |||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  18978029 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgca 18978122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 18979220 - 18979118
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccattt 255  Q
    |||||||||||||||||| ||| ||| ||| || ||||| ||||||||| ||||||| || ||||||||||||||| ||||| || ||||||||||||||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccattt 18979121  T
Q  256 gca 258  Q
    |||    
T  18979120 gca 18979118  T

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Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 43661924 - 43661818
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||| |||||||||||||||||||||| ||| ||||| || |||||||  ||| ||| |||||||||||| |||||| |||||||||||||| ||||| |    
T  43661924 ggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagatttcgcccaat 43661825  T
Q  255 tgcatct 261  Q
    |||||||    
T  43661824 tgcatct 43661818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 247
Target Start/End: Complemental strand, 8389787 - 8389698
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagattta 247  Q
    |||||||||||||||| | ||||| ||| ||||| || ||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  8389787 taaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagattta 8389698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 12351921 - 12352016
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||||||||| ||| || ||||||| ||| ||||| || ||||||||  ||||||||||||||||||||||||||  |||||||||||||||||    
T  12351921 ggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcc 12352016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 11287779 - 11287864
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaaga 243  Q
    |||||||||||||| ||||| ||| ||| |||||||| ||||||||| || ||||||||| ||||||||||||| |||||||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaaga 11287864  T

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Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 247
Target Start/End: Complemental strand, 40471244 - 40471156
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagattta 247  Q
    |||||||||||||||| || |||| ||| |||||||| ||||||||||||  ||| |||||||||||||||||||||||| |||||||||    
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttggtcca-taaatacaaaaactacaattttagccccttaagattta 40471156  T

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Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 8388464 - 8388564
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||| || ||  ||| ||||||||| || ||||||| | |||||| |||||||||||| |||||| ||||||||||||||||||| ||    
T  8388464 ggctaaagtgcactttcccccc--taacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctt 8388561  T
Q  255 tgc 257  Q
    |||    
T  8388562 tgc 8388564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 24122883 - 24122976
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    |||||||||||| |||||| |||| || ||| ||||| || ||||||||  ||||||||||||||||||| |||||||| |||||||||||||||    
T  24122883 ggctaaagtgcatttttcccccct-aactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagc 24122976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 30336602 - 30336496
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||| | | ||| ||| ||| ||||||||  |||||| | | ||||||||||||||||||||||||| ||| |||||||||||||  ||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagccattt 30336503  T
Q  255 tgcatct 261  Q
    |||||||    
T  30336502 tgcatct 30336496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 11282011 - 11282111
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||| | ||||||| ||||||||| || ||||||||| ||||||  ||||||||  ||||||||  |||||||||||||| ||| |||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgc 11282110  T
Q  258 a 258  Q
    |    
T  11282111 a 11282111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 258
Target Start/End: Original strand, 18970920 - 18971013
Alignment:
Q  164 gcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgca 258  Q
    |||||||||| |||| || ||| |||| ||||||||||||| ||||||||||||||||||||||||||  ||||  |||||||| ||| ||||||    
T  18970920 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgca 18971013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 261
Target Start/End: Complemental strand, 24123967 - 24123893
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    |||||||| ||||||||| | | ||||||| |||| ||||||||||||| ||||||||||||||| |||||||||    
T  24123967 aaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgcatct 24123893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 42982758 - 42982658
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||||||||| |||| ||||||||| ||  |||||||| |||||    |||||||||||||||||  ||||  |||| ||||||||||    
T  42982758 ggctaaagtgcacttttccacctttaagttttaaaaagttgtaattttggccccctgtaaacaaaaactacaattttgacccctcaagaattagcccatt 42982659  T
Q  255 t 255  Q
    |    
T  42982658 t 42982658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 32207424 - 32207320
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||| || ||  |||  || |||||||| ||||||||   ||||||||||||||||||||||||| ||| | ||||||||||||  ||    
T  32207424 ggctaaagtgcactttcccccc--taaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctt 32207327  T
Q  255 tgcatct 261  Q
    |||||||    
T  32207326 tgcatct 32207320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 5514370 - 5514266
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||||   |||| |||||| |||||||| ||||||| | |  |||| |||||||||||||||||| | || |||| ||||||||||||    
T  5514370 ggctaaagtgcacttttatcccct-aattttaaaaaacttgcaattttagccttctaaatacaaaaactacaatttt-gacctctaaaatttagcccatt 5514273  T
Q  255 tgcatct 261  Q
    |||||||    
T  5514272 tgcatct 5514266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 24361290 - 24361191
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||  || ||| |||||||||| |||| |||||||||| ||| ||||||||| ||||||||||  ||  |||||||||| ||||||||    
T  24361290 taaagtgcacttttcttccttta-tttttaaaaaatttcgattttggtcctctatgtacaaaaattacaattttaatcctttaagatttag-ccatttgc 24361193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 29043400 - 29043504
Alignment:
Q  157 ctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttg 256  Q
    ||||||| ||||||||| |||||||  || ||||| |  | ||||||  |||||| |||||||||||||||||||  ||| |||||||||||||| ||||    
T  29043400 ctaaagttcacttttcctcccttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaattttttccctctaagatttagcccctttg 29043499  T
Q  257 catct 261  Q
     ||||    
T  29043500 tatct 29043504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 45114617 - 45114541
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    |||| |||||||||||||| ||| ||| ||| |||||||| |||||||||| | ||| ||||| |||||||||||||    
T  45114617 ggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaatttt 45114541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 18488336 - 18488257
Alignment:
Q  182 tttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    |||| ||||| || ||||||| ||||||||  |||||||||||||||||| |||| ||||||| || ||| |||||||||    
T  18488336 ttttaaaaaagttgcaattttagtcccctatatacaaaaactacaattttggccctctaagatataacccctttgcatct 18488257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 24359866 - 24359913
Alignment:
Q  214 tacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  24359866 tacaaaaactacaattttgaccccctaagatttagcctatttgcatct 24359913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 30570353 - 30570251
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||| ||| | ||  ||| ||||||||| || |||||||| |||  || ||||||||| || |||||| ||||||||||||||||||| |||||    
T  30570353 taaagtgcaccttttcccctctaagttttaaaaagttgcaattttgatcct-tatgtacaaaaattagaattttggccccctaagatttagcccttttgc 30570255  T
Q  258 atct 261  Q
    ||||    
T  30570254 atct 30570251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaa 221  Q
    |||||||||||| |||||| |||| |||||| |||||||| |||||||| |||||||||||||||||    
T  23170098 ggctaaagtgca-ttttcccccct-aattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 30568887 - 30568992
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||| || | || || ||| ||||| || |||||||| || | || |||||||||||| ||||||   ||||||||||||||||| ||    
T  30568887 ggctaaagtgcactttccccctct-aagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagcccctt 30568985  T
Q  255 tgcatct 261  Q
    |||||||    
T  30568986 tgcatct 30568992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 24483143 - 24483200
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaa 212  Q
    ||||||||||||||||||| | | ||||||| |||||||| ||||||||| |||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccccctaa 24483200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 11283310 - 11283207
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| ||| || ||||||| ||| ||||| ||  |||||| | |||||| ||| |||||  |||||||| | ||||||| ||||||||| ||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagcccctt 11283211  T
Q  255 tgca 258  Q
    ||||    
T  11283210 tgca 11283207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 2379961 - 2379919
Alignment:
Q  219 aaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||    
T  2379961 aaactacaattttggccccttaagatttagctcatttgcatct 2379919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 36249552 - 36249601
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttgg 204  Q
    ||||||||||||||||||| ||||||| ||| ||||| || |||||||||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttgg 36249601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 11456638 - 11456694
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtccccta 211  Q
    ||||||||||||||||||  ||| ||||||| ||||| || ||||||||| ||||||    
T  11456638 ggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccccta 11456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 32968456 - 32968560
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||| ||| ||| ||||  || | ||||||| |||| | |||  ||||| |||||||| |||| ||| | |||||||| ||    
T  32968456 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagcccctt 32968555  T
Q  255 tgcat 259  Q
    |||||    
T  32968556 tgcat 32968560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 247
Target Start/End: Complemental strand, 34625241 - 34625209
Alignment:
Q  215 acaaaaactacaattttagccccctaagattta 247  Q
    |||||||||||||||||||||||||| ||||||    
T  34625241 acaaaaactacaattttagccccctatgattta 34625209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 38974795 - 38974891
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| ||| ||||  || | ||||||| |||| | |||  ||||| |||||||| |||||||| | ||||||||    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccc 38974891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 38980145 - 38980049
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| ||| ||||  || | ||||||| |||| | |||  ||||| |||||||| |||||||| | ||||||||    
T  38980145 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccc 38980049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 39005893 - 39005989
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| ||| ||||  || | ||||||| |||| | |||  ||||| |||||||| |||||||| | ||||||||    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccc 39005989  T

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Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 39011242 - 39011146
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| ||| ||||  || | ||||||| |||| | |||  ||||| |||||||| |||||||| | ||||||||    
T  39011242 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccc 39011146  T

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Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 1290299 - 1290193
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||| ||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| ||    
T  1290299 ggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccctt 1290200  T
Q  255 tgcatct 261  Q
    |||||||    
T  1290199 tgcatct 1290193  T

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Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 19750673 - 19750580
Alignment:
Q  157 ctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||| |||| || |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19750673 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccc 19750580  T

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Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 19789133 - 19789226
Alignment:
Q  157 ctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||| |||| || |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19789133 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccc 19789226  T

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Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 1963196 - 1963299
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| ||||| || ||||||||| | |||| ||||||||||||||||||||||||||||||| ||||||| ||    
T  1963196 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccctt 1963295  T
Q  255 tgca 258  Q
    ||||    
T  1963296 tgca 1963299  T

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Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 12129626 - 12129729
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||| | ||||| ||| |||||||| ||||||||| ||| ||||||||||||||||||||||  |||| |||||||||||||||||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T
Q  258 atct 261  Q
    ||||    
T  12129726 atct 12129729  T

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Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 21539162 - 21539066
Alignment:
Q  165 cacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    |||||||||||||||||||||||||||||| ||||||||| | |||||||  |||||||||||||||  |||||||||||||||| | |||||||||    
T  21539162 cacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgcatct 21539066  T

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Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 52491708 - 52491612
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||| |||||||||||||||| ||| |||||||| |||||||||||| |||| |||| ||||||||||||| ||||||||| |||||||||    
T  52491708 ggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagccc 52491612  T

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Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 31599789 - 31599892
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||| |||||||||||| | ||| ||| |||||||||||| ||||||||  |||||||||||||||||||||||||| | ||||||||||||||||| ||    
T  31599789 ggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccctt 31599888  T
Q  255 tgca 258  Q
    ||||    
T  31599889 tgca 31599892  T

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Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 31601086 - 31600983
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | ||  ||| |||||||||||| ||||||||  ||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccatt 31600987  T
Q  255 tgca 258  Q
    ||||    
T  31600986 tgca 31600983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 1835203 - 1835097
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||||||| || ||| ||| |||||||| ||||||||  ||||||||||  ||||||||||||||  |||||||||||||||||| ||    
T  1835203 ggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 1835104  T
Q  255 tgcatct 261  Q
    |||||||    
T  1835103 tgcatct 1835097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 10471489 - 10471393
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||| ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 10471393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 35935631 - 35935539
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    ||||||||||||| || ||||||| ||||||||| || ||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcc 35935539  T

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Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 1834119 - 1834226
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttag-ccccctaagatttagcccat 253  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||  |||||| ||| ||||||||||||||| | ||||||||||||||||||||    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccat 1834218  T
Q  254 ttgcatct 261  Q
    ||||||||    
T  1834219 ttgcatct 1834226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 8758935 - 8758844
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    |||| ||||||||||| ||||||| ||| |||||||| ||||||||| |||||||||||| ||||||||||||| ||||| |||||||||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagc 8758844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 10447006 - 10447113
Alignment:
Q  155 ggctaaagtgcacttttccacc-cttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccat 253  Q
    ||||||||||||||||||| || ||||| ||| ||||| || ||||||| | |||||| |||||||||| ||||||||| |||||||||||||||||| |    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccct 10447105  T
Q  254 ttgcatct 261  Q
    ||||||||    
T  10447106 ttgcatct 10447113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 1964542 - 1964440
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||| | ||||||||||||||||| | ||| ||||| ||| ||| ||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtcccttaagaattatcccctt 1964443  T
Q  255 tgc 257  Q
    |||    
T  1964442 tgc 1964440  T

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Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 17388311 - 17388216
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| |||| || ||| |||||||| ||||||||||||| |||||||| ||||||||||||| |||||| |||| |||||||    
T  17388311 ggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagccc 17388216  T

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Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 48780248 - 48780344
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| |||||||||||| ||||||||  ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  48780248 ggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 48780344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 49308127 - 49308033
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| |||| || ||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  49308127 ggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-gccccctatgattttgccc 49308033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 17382993 - 17383095
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||  |||| || ||| |||||||| ||||||||||||| |||||||||||||||||||||| |||||| |||| ||| ||| ||    
T  17382993 ggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatcccctt 17383091  T
Q  255 tgca 258  Q
    ||||    
T  17383092 tgca 17383095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 8155741 - 8155843
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttgg-tcccctaagtacaaaaactacaattttagccccctaagatttagcccatttg 256  Q
    |||||||||||||||| ||  ||| ||| |||||||| ||||||| | |||||||||| |||||||||||||||| ||||||||||||||||||  ||||    
T  8155741 taaagtgcacttttccccc--taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttg 8155838  T
Q  257 catct 261  Q
    |||||    
T  8155839 catct 8155843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 8757675 - 8757770
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||| | ||||||| ||| |||||||| ||||||| | |||||||||||| ||||||||||||| | ||| |||||||||||||    
T  8757675 ggctaaagtgcactttttc-cccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagccc 8757770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 25685923 - 25685827
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  25685923 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagccc 25685827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 26421722 - 26421624
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| | || || ||| |||||||| ||||||||  | ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  26421722 ggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttagcccatt 26421624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 13509459 - 13509346
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| |||||||| |||| || ||||||||| || ||||||||| |||| |||||  ||||||||||||||   ||||||||||||||||| ||    
T  13509459 ggctaaagtgtacttttcccccct-aacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcccctt 13509361  T
Q  255 tgcatctctgctcct 269  Q
    |||| || |||||||    
T  13509360 tgcacctttgctcct 13509346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 10470546 - 10470642
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||  || |||||||| ||||  |||||||   ||||||||||||||||||    
T  10470546 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagccc 10470642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 25684934 - 25685030
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| ||||||||  || |||||||| ||||| |||||||   ||||||||||||||||||    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagccc 25685030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 10448361 - 10448255
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||  || ||| ||| ||| ||||| || | ||||| | |||||| ||||||||||||||||||| |||| ||||||| |||||| ||    
T  10448361 ggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccctt 10448262  T
Q  255 tgcatct 261  Q
    |||||||    
T  10448261 tgcatct 10448255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 5526226 - 5526131
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| | || || ||| |||||||| ||||||||| ||||||||||  ||||| |||||||   ||||||||||||||||||    
T  5526226 ggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagccc 5526131  T

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Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 1289100 - 1289203
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||| |||||||| ||||||| ||| ||| | ||  ||||||| ||| ||||||| ||||||||||||||||||| | ||||||||| |||  ||||    
T  1289100 taaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaacccccttgc 1289199  T
Q  258 atct 261  Q
    ||||    
T  1289200 atct 1289203  T

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Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 33296247 - 33296329
Alignment:
Q  179 taatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||| ||||||||  |||||||||| |||||||| |||||||| |||||| | ||||||  ||||||| |||||||||||    
T  33296247 taattttcaaaaacttataattttggtctcctaagtataaaaactataattttggtcccctataatttagctcatttgcatct 33296329  T

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Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 35934347 - 35934438
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||||||| ||  ||| ||| ||||||||  ||||||||||||||||||| | ||| || |||||| ||||| |||||||||||||    
T  35934347 taaagtgcacttttccccc--taactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccc 35934438  T

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Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 46638805 - 46638723
Alignment:
Q  176 ccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgca 258  Q
    |||||| ||| ||||| ||  ||||||| ||||||| | ||||||| |||||||||||||||||||||||||| || ||||||    
T  46638805 ccttaactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagccccctaagatttagtccctttgca 46638723  T

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Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 13386014 - 13386111
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaa-ctttcaattttggtcccctaagtacaaaaactacaattt-tagccccctaagatttagcc 250  Q
    ||||||||||||||||||| ||  ||| ||| ||||| ||| ||||||||| ||||||||||| ||||| ||||||| |  |||||||||||||||||    
T  13386014 ggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcc 13386111  T

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Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 5525360 - 5525455
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||| || |||||| |||| || ||| |||||||| ||||||||  ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  5525360 ggctaaagtacatttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 5525455  T

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Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 48781146 - 48781051
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||  ||| ||| ||||| || |||||||||| |||||||||| ||||| |||||||   |||||||| |||||||||    
T  48781146 ggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggt-ccctaagtactaaaaccacaatttagcccccctaaaatttagccc 48781051  T

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Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 50909774 - 50909667
Alignment:
Q  155 ggctaaagtgcactttt-ccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt-agccccctaagatttagccca 252  Q
    ||||||||||||||||| ||||||| || ||||||||| || | ||||||   ||||| ||| ||||||||||||||| | |||| |||||||||||||     
T  50909774 ggctaaagtgcactttttccaccct-aagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagcccc 50909676  T
Q  253 tttgcatct 261  Q
    |||||||||    
T  50909675 tttgcatct 50909667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 21177997 - 21178099
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| ||||| || |||| || ||| | ||| || |||||||| ||||||| | |||||||||||||||||  |||||||| ||||||||| ||    
T  21177997 ggctaaagtgtactttccccccct-aactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcccttt 21178095  T
Q  255 tgca 258  Q
    ||||    
T  21178096 tgca 21178099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 13386634 - 13386537
Alignment:
Q  155 ggctaaagtgcactttt-ccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||| || ||| ||| ||| |||||||| ||||||||  ||| ||||||| ||||| |||||||   ||||||||||| ||||||    
T  13386634 ggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagccc 13386537  T

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Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 256
Target Start/End: Complemental strand, 27258041 - 27257960
Alignment:
Q  175 cccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttg 256  Q
    ||||||| ||||||||| || ||||||||  || |||  |||||||||| |||||||| |||| ||||||||||||| ||||    
T  27258041 cccttaacttttaaaaagttgcaattttgaccctctatatacaaaaactccaattttaaccccttaagatttagcccctttg 27257960  T

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Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 3927666 - 3927770
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||||||||  || | ||||||| |||| | |||  |||||||||||||| | || ||| | |||||||||||    
T  3927666 ggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttggtcctctatgttttagcccatt 3927765  T
Q  255 tgcat 259  Q
    |||||    
T  3927766 tgcat 3927770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 3928959 - 3928855
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||| ||| ||| ||||  || | ||||||| |||||| |||  ||||| |||||||| |||| ||| | |||||||| ||    
T  3928959 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatgttttagcccctt 3928860  T
Q  255 tgcat 259  Q
    |||||    
T  3928859 tgcat 3928855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 55603628 - 55603549
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccc 238  Q
    |||||||||||||| | ||||||| ||| |||||||| |||||||  ||||||  ||||||||||||| ||||| ||||||    
T  55603628 taaagtgcactttttc-cccttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccccc 55603549  T

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Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 37728638 - 37728572
Alignment:
Q  183 ttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    ||||||||| || ||||||||| | |||| |||||||||||||||||||  |||  |||||||||||    
T  37728638 ttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagatttagc 37728572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 55602379 - 55602459
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccct 239  Q
    ||||||||| |||||| || |||| ||| |||||||| ||||||| |||| |||  || ||||||||||||||||| |||||    
T  55602379 taaagtgcatttttcc-cctttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaattttagtcccct 55602459  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 54110671 - 54110623
Alignment:
Q  213 gtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||||| || |||||||||||||||| ||||||| || ||||||||    
T  54110671 gtacaaaaattataattttagccccctaaaatttagctcaattgcatct 54110623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 51684366 - 51684472
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| |||||| ||| ||||||||||||||| ||||||||||||||||||| ||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcccctt 51684465  T
Q  255 tgcatct 261  Q
    |||||||    
T  51684466 tgcatct 51684472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 11437300 - 11437194
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | ||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||| ||    
T  11437300 ggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagatttaacccttt 11437201  T
Q  255 tgcatct 261  Q
    | |||||    
T  11437200 tacatct 11437194  T

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Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 24422800 - 24422896
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||| | ||||||| ||| |||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  24422800 ggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccc 24422896  T

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Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 36614005 - 36613910
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||||||||| |||||| ||| ||| ||||||||||||  |||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagcc 36613910  T

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Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 39222575 - 39222468
Alignment:
Q  155 ggctaaagtgcacttttccaccctt-aatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccat 253  Q
    ||||||||||||||||| | ||||| || ||| |||||||| ||||||||| |||||||||| |||||||||||| ||||||| ||||||||| ||||||    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgcccat 39222476  T
Q  254 ttgcatct 261  Q
    ||||||||    
T  39222475 ttgcatct 39222468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 11436042 - 11436148
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| || |||| ||| |||||||| ||||||||| |   |||||| ||||||||||||||| ||||||||||||||| ||||||    
T  11436042 ggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccatt 11436141  T
Q  255 tgcatct 261  Q
    |||||||    
T  11436142 tgcatct 11436148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 24426173 - 24426080
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||| || ||  ||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccc 24426080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 35067103 - 35067000
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| ||||| || | ||||||| |||||| | ||||||||||||||||| ||||||||| ||||||||| ||    
T  35067103 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagcccctt 35067004  T
Q  255 tgca 258  Q
    ||||    
T  35067003 tgca 35067000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 39698563 - 39698657
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||||||||||||| || ||||||| |||||||||||||||||||||| |||||||||||| |||||| |||||| | || |||||||||||||    
T  39698563 ggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataatttt-ggccactaagatttagcc 39698657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 52274968 - 52275063
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    ||||||||||||||||| | ||| ||| ||| |||||||| ||||||||  |||||||||||||||||||||||||| | ||||||||||||||||    
T  52274968 ggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcc 52275063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 45148581 - 45148686
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | | ||||| ||| |||||||| ||||||||| |||||||||| |||||||||||||||  |||||||||||||| ||| ||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaacccctt 45148679  T
Q  255 tgcatct 261  Q
    |||||||    
T  45148680 tgcatct 45148686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 23980567 - 23980463
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| |||||||||  |||||||||||||||||| |||||| | | ||||||||||||||| ||    
T  23980567 ggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcccctt 23980468  T
Q  255 tgcat 259  Q
    |||||    
T  23980467 tgcat 23980463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 39699867 - 39699772
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| |||| || ||| || ||||| ||||||||  |||||||||||| ||||||||||||| |||||||||||||||||||    
T  39699867 ggctaaagtgcacttttcccccct-aactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagccc 39699772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 52827347 - 52827443
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| ||||||||  ||||||||||| ||||| ||||||| | ||||||||||||||||||    
T  52827347 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccc 52827443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 39153214 - 39153111
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||| | ||||||| ||| |||||||| ||||||||| ||| || |||||||||||||||||||  ||| |||||||||| ||| |||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 39153115  T
Q  258 atct 261  Q
    ||||    
T  39153114 atct 39153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 43058789 - 43058891
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||| ||||||| | |||| || ||| |||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||||| ||| |    
T  43058789 taaagtacactttttccccct-aactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctttac 43058887  T
Q  258 atct 261  Q
    ||||    
T  43058888 atct 43058891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 50680335 - 50680437
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||| |||||| ||||||| ||  |||||||| ||||||||| |||||||||| |||||||| |||||||| ||||||||||||| ||| |||||    
T  50680335 taaagtgcatttttcc-cccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccctttgc 50680433  T
Q  258 atct 261  Q
    ||||    
T  50680434 atct 50680437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 35594217 - 35594321
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||| | ||||||||||  |||||||||||||| | ||||||| ||||||||| ||    
T  35594217 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttt-gacccctaagtattaaaactacaatttt-gacccctaaaatttagcccctt 35594314  T
Q  255 tgcatct 261  Q
    |||||||    
T  35594315 tgcatct 35594321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 36612853 - 36612958
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| |||||| ||||||| ||| ||||| || |||||||||  |  ||||||||||||||||||||||| ||||||||||||||| || ||    
T  36612853 ggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttggatct-taagtacaaaaactacaattttaaccccctaagatttagtccctt 36612951  T
Q  255 tgcatct 261  Q
    |||||||    
T  36612952 tgcatct 36612958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 51685866 - 51685760
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| ||||| || | ||||||| || ||| |||||||||||||||||||  |||||||||||||||||| ||    
T  51685866 ggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccctt 51685767  T
Q  255 tgcatct 261  Q
    |||||||    
T  51685766 tgcatct 51685760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 45150068 - 45149965
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt-agccccctaagatttagcccatttg 256  Q
    |||||||||||||||| |||| || ||| |||||||| ||||||||| ||| ||||||||||||| ||||||||   |||||||||||||||||| ||||    
T  45150068 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttg 45149970  T
Q  257 catct 261  Q
    |||||    
T  45149969 catct 45149965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 43378810 - 43378708
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||  | ||||| ||| |||||||| |||||||| ||||||||||||||||| |||||||||  || ||||||||||||| | |||||    
T  43378810 taaagtgcacttttct-ctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgc 43378712  T
Q  258 atct 261  Q
    ||||    
T  43378711 atct 43378708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 25652738 - 25652820
Alignment:
Q  179 taatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||| |||||||| |||||||| |||| |||||||||||| || || ||| |||| ||||||||||||||||||||||||    
T  25652738 taattttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagcccatttgcatct 25652820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 44404442 - 44404548
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||| ||||||||| | | | ||| ||| |||||||  ||||||| | ||||||||||||||||||| |||||| ||||||||| |||||||| |||    
T  44404442 ggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagccaatt 44404541  T
Q  255 tgcatct 261  Q
    |||||||    
T  44404542 tgcatct 44404548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 45157309 - 45157204
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||| || |||| || ||| |||||||| ||||||||| |||||| |||||||||||||||||||  |||  ||||||||| ||| ||    
T  45157309 ggctaaagtgcactttccccccct-aagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 45157211  T
Q  255 tgcatct 261  Q
    |||||||    
T  45157210 tgcatct 45157204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 52828168 - 52828075
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||||||| ||  ||||||| |||||||| |||||||||  |||||||||| ||||| |||||||   ||||||||||||||||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagccc 52828075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 37526975 - 37526873
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||| |||||||| ||||||| ||| |||||||| |||||||||  |||||| || | |||| |||||||| ||||| ||||||||||||| |||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccc-taagatttagcccctttgc 37526877  T
Q  258 atct 261  Q
    ||||    
T  37526876 atct 37526873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 7675559 - 7675454
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| ||||| ||||| |||| ||| |||||||| ||||||||  | |||||||| ||||| || ||||||  |||||||||||||||||| ||    
T  7675559 ggctaaagtgtacttt-ccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctt 7675461  T
Q  255 tgcatct 261  Q
    |||||||    
T  7675460 tgcatct 7675454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 46066525 - 46066631
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||| |||||||||||||| ||  ||| ||| ||||| || | ||||| | ||| || ||||||||||||||||||||||||| |||||||||||| |||    
T  46066525 ggcttaagtgcacttttcctcc--taactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttagcccc-taagatttagccaatt 46066621  T
Q  255 tgcatctctg 264  Q
    ||||||||||    
T  46066622 tgcatctctg 46066631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 45156052 - 45156141
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagattta 247  Q
    |||||| ||||||||| ||||||| ||| |||||||| ||||||||  |  ||| |||||||||||||||||||| ||| ||||||||||    
T  45156052 taaagttcacttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagattta 45156141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 7674528 - 7674602
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||||||||| ||||||| |||| || |||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  7674528 ggctaaagtgcccttttcccccct-aacttttaaaaacttgcaattttgggccc-taagtacaaaaactacaatttt 7674602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 11190385 - 11190461
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||||||||||||||||  ||||||| ||||||||| || |||||||||| |||||  |||||||||| |||||||    
T  11190385 ggctaaagtgcacttttcaccccttaaattttaaaaagttgcaattttggttccctatatacaaaaactgcaatttt 11190461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 14999285 - 14999360
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    |||||||||| |||||||| |||| || ||| |||||||| ||||||||  ||||||||||||||||||||||||||    
T  14999285 ggctaaagtgtacttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 14999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 41364829 - 41364924
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||  |||| || ||| |||||||| ||||||||| ||||||| ||| ||||| |||||||   ||||||||||||||||||    
T  41364829 ggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagccc 41364924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 44412032 - 44411964
Alignment:
Q  190 aactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgca 258  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| |||  |||||||||| || ||||||    
T  44412032 aacttgcaattttagtcccctaagtacaaaaactacaattttacccctttaagatttaggccctttgca 44411964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 12390082 - 12389980
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| ||||||  |||||| ||| ||||| || | |||||| ||||||| ||||||||| || |||||| ||||||| ||||||||||| ||    
T  12390082 ggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccccct-agatttagcccctt 12389984  T
Q  255 tgca 258  Q
    ||||    
T  12389983 tgca 12389980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 15000056 - 14999953
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||| ||||||| |  || ||| |||||||||||| |||||||| |||||||||||||||| |||||||  |  || ||||| |||||| |||||    
T  15000056 ggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaatcatgaccacctaaaatttagtccatt 14999957  T
Q  255 tgca 258  Q
    ||||    
T  14999956 tgca 14999953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 33088718 - 33088615
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||||||  |  |||  || |||||||| ||||||||  ||  ||||||||||||||||||||||  | |||||||||||||||| ||    
T  33088718 ggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcccctt 33088619  T
Q  255 tgca 258  Q
    ||||    
T  33088618 tgca 33088615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 39151934 - 39152037
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||| |||| | ||||||| ||| ||||||||  |||||||| |||||| |||||||||||||||||||  | |  ||||||||| ||| |||||    
T  39151934 taaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagatttaacccctttgc 39152033  T
Q  258 atct 261  Q
    ||||    
T  39152034 atct 39152037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 43060107 - 43060001
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| ||||| || ||  ||| ||| ||||| ||  |||||||  ||| ||||||||||||||||||||||  |||| ||||||||||| ||||    
T  43060107 ggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctcatt 43060008  T
Q  255 tgcatct 261  Q
    |||||||    
T  43060007 tgcatct 43060001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 52276222 - 52276168
Alignment:
Q  197 aattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||| ||||||||||||||||||| || ||||| |||||||||||||||||    
T  52276222 aattttggccccctaagtacaaaaactataaatttagtcccctaagatttagccc 52276168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 50681705 - 50681632
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaat 228  Q
    ||||||||||||||||||| | ||||||||| |||||||| |||||||||  | |||| || ||||||||||||    
T  50681705 ggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaat 50681632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 41366231 - 41366136
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| | | ||| ||| |||||| | ||||||| | ||| ||||||  ||||| |||| |||||||||||||||||||||||    
T  41366231 ggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaa-tttagccccctaagatttagccc 41366136  T

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Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 40384748 - 40384831
Alignment:
Q  178 ttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    |||||||| ||||| || ||||||| ||| |||| |||||||||||||||||||   ||||||| ||||||||  |||||||||    
T  40384748 ttaattttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatcccctaaaatttagcctctttgcatct 40384831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 35595294 - 35595187
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaacttt-caattttggtcccctaagtacaaaaacta-caattttagccccctaagatttagccca 252  Q
    |||||||||| |||||||| ||  ||| ||| ||||||||  ||||||||  |||||| ||| |||||||| ||||||| ||||| |||||||||||||     
T  35595294 ggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccc-taagatttagcccc 35595196  T
Q  253 tttgcatct 261  Q
    |||||||||    
T  35595195 tttgcatct 35595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 33088099 - 33088169
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||  ||||||  || ||||| || ||||||||||||||||  ||| |||||||||||||||||||    
T  33088099 aaaaacttgtaatttttatctcctaaatataaaaactacaattttattcccttaagatttagcccatttgc 33088169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 7983053 - 7983141
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagattta 247  Q
    |||||||||||||||  ||| ||| ||| || ||||| ||||||||| |||||| |||  ||||| ||||||||  ||||||||||||||    
T  7983053 taaagtgcacttttct-cccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagattta 7983141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 30249533 - 30249485
Alignment:
Q  213 gtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    |||||||||||||||||||  |||| ||||||||||| |||||| ||||    
T  30249533 gtacaaaaactacaattttgaccccttaagatttagctcatttgtatct 30249485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 248
Target Start/End: Original strand, 43377721 - 43377813
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttag 248  Q
    |||||| || |||||| | | ||||||||||||| |||| ||||||| ||||  |||||| ||||| || |||||| ||| ||||| ||||||    
T  43377721 gctaaaatgtactttttcccgcttaatttttaaacacttgcaattttagtcctttaagtataaaaattataattttggcctcctaaaatttag 43377813  T

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Target: scaffold0019 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 61559 - 61454
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccattt 255  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||||| | ||||||||||||||||||| |||||| |||||||| |||||||||| |||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagccctttt 61460  T
Q  256 gcatct 261  Q
    ||||||    
T  61459 gcatct 61454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 60090 - 60196
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| |||||||||||| ||||||||  |||||| ||| |||||||||||||||  ||||||| |||||||||| ||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccctt 60189  T
Q  255 tgcatct 261  Q
    |||||||    
T  60190 tgcatct 60196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 54540891 - 54540788
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||  ||| |||||||||||||||||||||| ||||||||||||||||||| ||    
T  54540891 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccctt 54540792  T
Q  255 tgca 258  Q
    ||||    
T  54540791 tgca 54540788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 23770505 - 23770402
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||| |||||  ||||||||||| ||||| || ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||||    
T  23770505 taaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagatttaacccctttgc 23770406  T
Q  258 atct 261  Q
    ||||    
T  23770405 atct 23770402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 29931226 - 29931329
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||| | ||||||| |||||||||||||||||| ||||||||||||||| ||| ||    
T  29931226 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctt 29931325  T
Q  255 tgca 258  Q
    ||||    
T  29931326 tgca 29931329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 29980380 - 29980483
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||| | ||||||| |||||||||||||||||| ||||||||||||||| ||| ||    
T  29980380 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctt 29980479  T
Q  255 tgca 258  Q
    ||||    
T  29980480 tgca 29980483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 7758402 - 7758508
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | ||||||| ||| |||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||| ||    
T  7758402 ggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccctt 7758501  T
Q  255 tgcatct 261  Q
    || ||||    
T  7758502 tgtatct 7758508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 8456479 - 8456572
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||||||||||||| | |||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8456479 gctaaagtgcactttttccccct-aattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcc 8456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 7267647 - 7267738
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||||||||||||| ||||||| ||| |||||||| ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||    
T  7267647 taaagtgcacttttcc-cccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcc 7267738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 22776913 - 22776809
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||| ||| ||| | ||| || ||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||| ||    
T  22776913 ggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagcccctt 22776814  T
Q  255 tgcat 259  Q
    |||||    
T  22776813 tgcat 22776809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 46719941 - 46720045
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| |||||| ||||||| ||||||||| || | ||||||| |||||| ||| ||||||||||||||||| || |||||||||||||||||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccatt 46720040  T
Q  255 tgcat 259  Q
    |||||    
T  46720041 tgcat 46720045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 54539755 - 54539858
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||   ||||||| ||||||||||||||||||   ||||||||||||||| ||||    
T  54539755 ggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagctcatt 54539854  T
Q  255 tgca 258  Q
    ||||    
T  54539855 tgca 54539858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 51469972 - 51470068
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||||||||||  || ||||||| |||||||| ||||||||| ||||||||||| ||||| ||||||| | ||||||||||||||||||    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagccc 51470068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 19984849 - 19984955
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| ||||||||| |||||| |||||||||||||||||||  |||  ||||||||| ||| ||    
T  19984849 ggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 19984948  T
Q  255 tgcatct 261  Q
    |||||||    
T  19984949 tgcatct 19984955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 31645005 - 31645079
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||    
T  31645005 aaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatct 31645079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 535883 - 535787
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||| |||||||||||| ||| ||| |||||||| ||||||||||||| ||||||  ||||||| ||||||  ||||||||||||||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagccc 535787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 46721321 - 46721217
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||  ||| ||| ||||||||| || | |||||   |||||| ||||||||||||||||||||| ||||||||||||||||| ||    
T  46721321 ggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccctt 46721222  T
Q  255 tgcat 259  Q
    |||||    
T  46721221 tgcat 46721217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 29932799 - 29932697
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||  |||| |||||||||| || ||    
T  29932799 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgaccccttaagatttagtccctt 29932701  T
Q  255 tgca 258  Q
    ||||    
T  29932700 tgca 29932697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 29981953 - 29981851
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||  |||| |||||||||| || ||    
T  29981953 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgaccccttaagatttagtccctt 29981855  T
Q  255 tgca 258  Q
    ||||    
T  29981854 tgca 29981851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 534499 - 534605
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | ||  ||| | | |||||||| ||||||||  | |||| ||||||||||||||||||| |||||||||||||||||| |||    
T  534499 ggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcctatt 534598  T
Q  255 tgcatct 261  Q
    |||||||    
T  534599 tgcatct 534605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 47614185 - 47614291
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | ||  ||| ||| |||||||| ||||||||| ||||||||||  ||||| |||||||| ||||||||||||||||||  ||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctctt 47614284  T
Q  255 tgcatct 261  Q
    |||||||    
T  47614285 tgcatct 47614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 49216247 - 49216353
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||||| | ||| ||| ||||| || ||||||||  |||||| ||||||||||||||||| |  |||| ||||||||||| ||||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagctcatt 49216346  T
Q  255 tgcatct 261  Q
    |||||||    
T  49216347 tgcatct 49216353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 8875906 - 8876010
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||  ||||||| ||  |||||  | ||||||| | ||| || ||||||||||||||||||| |||||||||||||||||| |||    
T  8875906 ggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagccaatt 8876005  T
Q  255 tgcat 259  Q
    |||||    
T  8876006 tgcat 8876010  T

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Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 12700175 - 12700268
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||||||||||||| || ||  ||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||  ||||||| |||||||||    
T  12700175 ggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagcc 12700268  T

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Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 47609697 - 47609793
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||| ||||||||||| ||| ||| ||| |||||||| ||||||||  ||||||||||| ||||| ||||||| | ||||||||||||||||||    
T  47609697 ggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccc 47609793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 51038891 - 51038815
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||  |||||| | |||||||||||||||||    
T  51038891 ggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaatttt 51038815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 51037536 - 51037638
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||  ||||||| ||| ||||| || ||||||||  || ||| | ||||||||||||||||||||||||||||| ||||||| ||    
T  51037536 ggctaaagtgcacttttct-cccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagcccctt 51037634  T
Q  255 tgca 258  Q
    ||||    
T  51037635 tgca 51037638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 53614819 - 53614921
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| |||||| ||||||| ||| |||||||| ||||||| |||| |||  || ||||||||||||||| |||||| |||| ||||||||||    
T  53614819 ggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttggccccc-aagaattagcccatt 53614917  T
Q  255 tgca 258  Q
    ||||    
T  53614918 tgca 53614921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 12703600 - 12703495
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | | || || ||| ||||| ||  |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||  |    
T  12703600 ggctaaagtgcactttttccctct-aactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccat 12703502  T
Q  255 tgcatct 261  Q
    |||||||    
T  12703501 tgcatct 12703495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 24516464 - 24516554
Alignment:
Q  159 aaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    ||||||||||||| | ||| ||| ||| |||||||| |||||||||  ||||||||| ||||||||||||||| ||||| |||||||||||    
T  24516464 aaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagc 24516554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 19986173 - 19986065
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcc--cctaagtacaaaaactacaattttagccccctaagatttagccca 252  Q
    ||||||||||||||||||| | ||||| ||| |||||||| ||||||||| ||  |||| ||| |||||||||||||||  ||| |||||||||| |||     
T  19986173 ggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaacccc 19986074  T
Q  253 tttgcatct 261  Q
    |||||||||    
T  19986073 tttgcatct 19986065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 47610678 - 47610585
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  47610678 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 47610585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 55192095 - 55191993
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| | |||||| ||||||| ||| |||||||| ||||||||| || ||||||||||||||||||||||| |||||  |||| ||| ||| ||    
T  55192095 ggctaaagtgta-ttttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctt 55191997  T
Q  255 tgca 258  Q
    ||||    
T  55191996 tgca 55191993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 7268924 - 7268835
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttag 248  Q
    |||||||||||||||| |||| || ||| |||||||| ||||||||| | |||||||| | ||||||||||||| ||| ||||||||||||    
T  7268924 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttag 7268835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 23769857 - 23769962
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||| |||||||||||||||||||||| ||| || || || |||||||  ||| ||| || |||||||||||||||| | |||||||||||| || ||||    
T  23769857 ggctgaagtgcacttttccacccttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaatttt-gacccctaagatttcgctcatt 23769955  T
Q  255 tgcatct 261  Q
    |||||||    
T  23769956 tgcatct 23769962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 34019226 - 34019140
Alignment:
Q  175 cccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||| ||| |||||||| ||||||||  |||||| ||||||| ||||||||||| | ||||||| ||||||| |||||||||||    
T  34019226 cccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcatttgcatct 34019140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 52840705 - 52840609
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||| ||||||| ||| ||| ||| |||||||| |||||||||  |||||| ||  ||||| ||||||||  ||||||||||||||||||    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagccc 52840609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 53616114 - 53616014
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||| ||||||| ||||||| ||||  ||||||  | || || |||||||||||||||||| ||||||| |||| ||||| | |||||    
T  53616114 taaagtgcacttttcctcccttaacttttaaacacttgtaattttaattccttatgtacaaaaactacaatttcagccccccaagaattagctcctttgc 53616015  T
Q  258 a 258  Q
    |    
T  53616014 a 53616014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 47615649 - 47615591
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaag 213  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||| ||||||||    
T  47615649 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 248
Target Start/End: Original strand, 6170281 - 6170363
Alignment:
Q  164 gcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttag 248  Q
    |||||||| ||||| ||| ||| |||||||| |||||||| |||| |||||||||||| ||||||||||  ||| ||||||||||    
T  6170281 gcactttttcacccataactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttta--cccttaagatttag 6170363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 6250672 - 6250572
Alignment:
Q  160 aagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcat 259  Q
    ||||||||||| || |  |||| ||||||||| ||   |||||||||||||| |||||||| ||| ||||||||||| ||||||||||  ||||||||||    
T  6250672 aagtgcactttcccccttttaagttttaaaaaattgtgattttggtcccctatgtacaaaacctaaaattttagccctctaagattta-accatttgcat 6250574  T
Q  260 ct 261  Q
    ||    
T  6250573 ct 6250572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 5029783 - 5029688
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||  ||| |||| ||| ||||||||| | ||||||||| ||||| ||||||||  |||||||||| |||||||    
T  5029783 ggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagccc 5029688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 51347271 - 51347371
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||||||| || | ||||| ||| ||||| || |||||||||||| ||| | |||||||  ||||||||  |||||||||||||| ||| |||||    
T  51347271 taaagtgcactttccccctcttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaattttgaccccctaagatttaacccgtttgc 51347370  T
Q  258 a 258  Q
    |    
T  51347371 a 51347371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 5001200 - 5001275
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattt 230  Q
    ||||||||||||||||||| ||| ||  ||| |||| ||| ||||||||| ||||||||||| ||||| |||||||    
T  5001200 ggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 51470555 - 51470462
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagc-cccctaagatttagc 249  Q
    |||||||||||||| |||| |||| || ||| |||||||| |||||| | |||||||||||| ||||| |||| |||||| |||||||||||||||    
T  51470555 ggctaaagtgcactcttcccccct-aactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaa-tttagcacccctaagatttagc 51470462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 6249618 - 6249686
Alignment:
Q  164 gcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttta 232  Q
    |||||||| || || ||| ||| |||||||| |||||||  |||| |||||||||||||||||||||||    
T  6249618 gcactttttcatccataactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttta 6249686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 28263212 - 28263116
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| ||||||||  || | ||||||| |||| | |||  ||||| |||||||| |||||||| | ||||||||    
T  28263212 ggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccc 28263116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 40426877 - 40426785
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttc-aattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    |||||||||||||||| ||||||| ||| ||||| || | ||||| || ||| ||  |||||||| ||||||||| |||||||| ||||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgatttagc 40426785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 49398130 - 49398229
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||| ||||||| ||||||||| ||   ||||||||   ||| | ||||||| ||||||||| ||| | ||||||||||| |||||||    
T  49398130 taaagtgcacttttcc-cccttaagttttaaaaaattattattttggtgttctatgaacaaaaattacaattttggcctcttaagatttagctcatttgc 49398228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 54654365 - 54654301
Alignment:
Q  197 aattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||||||  ||| ||||||||| |||||||||||||| |||  |||||| ||||||||||||    
T  54654365 aattttggtcttctatgtacaaaaattacaattttagccctctagaatttagaccatttgcatct 54654301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 54987103 - 54987002
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||| ||  ||| ||| ||||| || | ||||| |||||||| ||| |||||||| ||||||  ||| |||||||||||| | |||||    
T  54987103 taaagtgcacttttccccc--taagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcctttgc 54987006  T
Q  258 atct 261  Q
    ||||    
T  54987005 atct 54987002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 4271440 - 4271543
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||| || ||||||| | | |||| ||| ||||| ||  ||||||| || | ||| || ||||||||||||||||||  | ||||||||||||||||    
T  4271440 ggctaaattgtacttttctatctttaactttcaaaaatttgtaattttgatctcttaaatataaaaactacaattttagcatcttaagatttagcccatt 4271539  T
Q  255 tgca 258  Q
    ||||    
T  4271540 tgca 4271543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 11670406 - 11670477
Alignment:
Q  177 cttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttag 248  Q
    ||||||||| ||||| || ||||||| |||||||||||| |||||||| |||||| | ||| || |||||||    
T  11670406 cttaattttcaaaaatttgcaattttagtcccctaagtataaaaactataattttggtcccttatgatttag 11670477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 53901487 - 53901403
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaa 241  Q
    ||||||||||||||||||| ||  ||| ||| ||||| || ||||||||   || ||||||||||||||||||| || |||||||||    
T  53901487 ggctaaagtgcacttttccccc--taagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggccccctaa 53901403  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 52104530 - 52104583
Alignment:
Q  208 cctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    |||| |||||||||||| |||||| ||| ||||||||||| | |||||||||||    
T  52104530 cctatgtacaaaaactataattttggccacctaagatttaactcatttgcatct 52104583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 47615608 - 47615572
Alignment:
Q  225 caattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  47615608 caattttggccccctaagatttagcccctttgcatct 47615572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 18371424 - 18371530
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| | | ||| ||| |||||||| ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcacatt 18371523  T
Q  255 tgcatct 261  Q
    |||||||    
T  18371524 tgcatct 18371530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 127337 - 127438
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| |||| || ||| |||||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |    
T  127337 ggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaa-tttagccccctaagatttagcccaat 127434  T
Q  255 tgca 258  Q
    ||||    
T  127435 tgca 127438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 22629483 - 22629592
Alignment:
Q  155 ggctaaagtgcacttttccacc---cttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||| |||||| ||   ||||||||| ||||||||  |||||||| | |||||||||||||||||||||||| |||||||||||||||||||    
T  22629483 ggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagccc 22629582  T
Q  252 atttgcatct 261  Q
     |||||||||    
T  22629583 ctttgcatct 22629592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 22630553 - 22630458
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||||||||||||||||  || ||| ||| |||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||    
T  22630553 ggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcc 22630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 42886384 - 42886281
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||  | | ||| ||| ||||| || ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgc 42886285  T
Q  258 atct 261  Q
    ||||    
T  42886284 atct 42886281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 7500455 - 7500560
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||||||| |||||||| ||| ||||||| | |||| |||||||| ||||||||||||||||||| ||    
T  7500455 ggctaaagtgcacttttcc-cccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccctt 7500553  T
Q  255 tgcatct 261  Q
    |||||||    
T  7500554 tgcatct 7500560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 18372534 - 18372452
Alignment:
Q  179 taatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  18372534 taattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatct 18372452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 31659622 - 31659719
Alignment:
Q  155 ggctaaagtgcactttt-ccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||| || ||| ||| ||| |||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccc 31659719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 31949322 - 31949418
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    |||||||||||||||||||  || ||||||| |||||||| ||||||||| ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  31949322 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 31949418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 34352887 - 34352795
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagattta 247  Q
    ||||||||||||||||| ||||  ||||||| |||||||||| ||||||||||| |||||||| |||||| |||||| |||| ||||||||||    
T  34352887 ggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccctctaagattta 34352795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 7501953 - 7501847
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||  ||||| |||||||| ||||| |||||| |||||| ||    
T  7501953 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccctt 7501854  T
Q  255 tgcatct 261  Q
    |||||||    
T  7501853 tgcatct 7501847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 14999249 - 14999150
Alignment:
Q  160 aagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcat 259  Q
    |||||||||||||| |||| |  |||| ||||||| ||||||||  ||||||| |||||||||||||||||| || |||||||||||||||| |||||||    
T  14999249 aagtgcacttttcccccctaa--ttttcaaaacttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcat 14999152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 17781663 - 17781757
Alignment:
Q  157 ctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||| ||| ||| ||| |||||||| ||||||||  ||||||||||| ||||| ||||||| | ||||||||||||||||||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccc 17781757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 3227695 - 3227599
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagc-cccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| ||||||||| ||||||||||| ||||| |||| |||||| |||||||||||||||||    
T  3227695 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcacccctaagatttagccc 3227599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 17782654 - 17782558
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  17782654 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 17782558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 3227109 - 3227203
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccc-taagatttagccc 251  Q
    ||||||||||||||| || |||| |||||| |||||||| ||||||||| ||||||||||| ||||| |||| |||||||||| |||||||||||||    
T  3227109 gctaaagtgcactttccccccct-aattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcccccttaagatttagccc 3227203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 48935004 - 48934901
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| |||||||||| ||| ||| ||||||||  |||||||  || |||||||||||||||| ||||||   |||| |||| ||||||||||    
T  48935004 ggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagcccatt 48934905  T
Q  255 tgca 258  Q
    ||||    
T  48934904 tgca 48934901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 769413 - 769519
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| |||||||||  ||||||| |||||||| ||||||||    |||||||||||||| || |||||| || |||| ||| ||| ||||||    
T  769413 ggctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggctcccttagaattaacccatt 769512  T
Q  255 tgcatct 261  Q
    |||||||    
T  769513 tgcatct 769519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 47369781 - 47369887
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||| |||||||||   ||| ||| ||| |||||||| ||||||| | | | ||||||||||||||| |||||| ||||| ||||||||||||| ||    
T  47369781 ggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctt 47369880  T
Q  255 tgcatct 261  Q
    |||||||    
T  47369881 tgcatct 47369887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 11658379 - 11658480
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||| ||||||||||| ||||||| ||| |||||| | ||||||| | |||||| ||||||||||||||||||| | |||  |||| ||||||| ||    
T  11658379 ggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctcaagaattagcccctt 11658478  T
Q  255 tg 256  Q
    ||    
T  11658479 tg 11658480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 31949903 - 31949807
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagc-cccctaagatttagccc 251  Q
    |||||||||||||| |||| ||| ||| ||| |||||||| ||||||||| ||||||| ||| ||||| |||| |||||| |||||||||||||||||    
T  31949903 ggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaa-tttagcacccctaagatttagccc 31949807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 11662649 - 11662549
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||| |||||| ||||||| ||| |||||||| ||||||| |  | ||| |||||||||||| |||||| |||||| |||| ||||||| |||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccctttgc 11662550  T
Q  258 a 258  Q
    |    
T  11662549 a 11662549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 20163657 - 20163585
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaa 227  Q
    ||||||||||||||| ||||||| ||| ||| |||||||| |||||||||  ||||| |||||||||||||||    
T  20163657 ggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 47525468 - 47525372
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||| | ||||||||||  ||||| |||||||   ||||||||||||||||||    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagccc 47525372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 21505416 - 21505520
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| ||||| || | ||||||| |||| |  ||||||||||||||||||  |||| ||||||||||||| ||    
T  21505416 ggctaaagtgcacttttccccc--taactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccctt 21505513  T
Q  255 tgcatct 261  Q
    |||||||    
T  21505514 tgcatct 21505520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 30439458 - 30439356
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||  | ||||||| ||| ||||| || | |||||| |  |||| || |||||||||||||||||| ||||||||||||||||| ||    
T  30439458 ggctaaagtgcactttctc-cccttaactttcaaaaagttacgattttgatttcctatgttcaaaaactacaattttagtcccctaagatttagcccctt 30439360  T
Q  255 tgca 258  Q
    ||||    
T  30439359 tgca 30439356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 128699 - 128606
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||  || ||| ||| ||||| || ||||||||  ||||||||||| ||||| |||||||   |||||||||||| |||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagccc 128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  162 gtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatt 229  Q
    |||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||| ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 14998048 - 14998086
Alignment:
Q  223 tacaattttagccccctaagatttagcccatttgcatct 261  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  14998048 tacaattttggccccctaagatttagcccctttgcatct 14998086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 34174083 - 34174010
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatt 229  Q
    ||||||||||||||||||| |||| |  ||| |||| ||| ||||||||| ||||||||||| ||||| ||||||    
T  34174083 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 17470 - 17573
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||| | ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| |||| ||| ||| ||    
T  17470 ggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccctt 17569  T
Q  255 tgca 258  Q
    ||||    
T  17570 tgca 17573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 18877 - 18781
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||| | | | ||| ||||||||| || |||||||||||||||| |||||||||||| |||||| ||||| ||| |||||||||    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagccc 18781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 1829701 - 1829598
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||||||||   ||| ||| |||||||||||| ||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgc 1829602  T
Q  258 atct 261  Q
    ||||    
T  1829601 atct 1829598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 10784592 - 10784696
Alignment:
Q  155 ggctaaagtgcacttttcca-cccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccat 253  Q
    |||||||||||||||||||  ||||||| |||||||||||| |||||||   |||||||||| ||||||||||||||| |||||| |||||||||||| |    
T  10784592 ggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccct 10784691  T
Q  254 ttgca 258  Q
    |||||    
T  10784692 ttgca 10784696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 7316395 - 7316289
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||| ||||||| ||   |||| |||||||| ||||| ||||||||||||| ||    
T  7316395 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcccctt 7316296  T
Q  255 tgcatct 261  Q
    |||||||    
T  7316295 tgcatct 7316289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 14822360 - 14822453
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttag 248  Q
    ||||| ||||||||||||  ||||||||||| |||||||| ||||||||| ||| |||||| | ||||||||||||| ||||||||||||||||    
T  14822360 ggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttag 14822453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 16704598 - 16704522
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||  ||||||||||||||||||||||||||    
T  16704598 ggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 16704522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 7314880 - 7314985
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||  ||||| ||||||||  |||||||||||||||||| ||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtatcaaaacaacaattttgaccccctaagatttagcccctt 7314978  T
Q  255 tgcatct 261  Q
    |||||||    
T  7314979 tgcatct 7314985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 14823677 - 14823583
Alignment:
Q  155 ggctaaagtgcacttttc-cacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttag 248  Q
    |||||||||||||||||  | ||||||||||| |||||||| ||||||| | ||| |||||||| ||||||||||||| ||||||||||||||||    
T  14823677 ggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttag 14823583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 5658759 - 5658859
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    ||||||||| |||||| ||||||| ||||||||| ||  |||||| || ||||| |||||||||||||||||||   ||| |||||||||||||||||||    
T  5658759 taaagtgcatttttccccccttaagttttaaaaagttataattttagttccctatgtacaaaaactacaattttgatcccttaagatttagcccatttgc 5658858  T
Q  258 a 258  Q
    |    
T  5658859 a 5658859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 8659265 - 8659361
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||| ||||| |||||||   ||||||||||||||||||    
T  8659265 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 8659361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 8822894 - 8822791
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||||||  | |||| ||| |||||||| ||||||||  ||||||||||| ||||| |||||||   ||||||||||||||||||| |    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccaat 8822795  T
Q  255 tgca 258  Q
    ||||    
T  8822794 tgca 8822791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 8821873 - 8821967
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||| ||||||||||| ||||| |||||||   ||||||||||||||||    
T  8821873 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 8821967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 10785986 - 10785911
Alignment:
Q  183 ttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgca 258  Q
    ||||||||| || |||||||   ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  10785986 ttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgca 10785911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 27437828 - 27437931
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||  ||||||| ||| ||||| || ||||||||| ||||||   | |||||||||||||||  |||||||||||||||| | ||    
T  27437828 ggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctt 27437927  T
Q  255 tgca 258  Q
    ||||    
T  27437928 tgca 27437931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 27322168 - 27322067
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| |||| |  ||| |||| ||| ||||||||| ||||||||||| ||||| ||||||||  |||||||||| ||||||| ||    
T  27322168 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagcccctt 27322070  T
Q  255 tgc 257  Q
    |||    
T  27322069 tgc 27322067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 12382811 - 12382706
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccattt 255  Q
    |||||||||||||||||||||  ||||||||||||| ||  |||||||  ||||||||||  ||||||| ||||||   |||| |||||||| ||| |||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagatttaaccctttt 12382712  T
Q  256 gcatct 261  Q
    ||||||    
T  12382711 gcatct 12382706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 3333127 - 3333024
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||| ||||||||||| |   ||| ||| ||||| || | ||||||| |||||| |||||||||||||||||||| ||| |||| ||||||||| ||    
T  3333127 ggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaatttagcccctt 3333028  T
Q  255 tgca 258  Q
    ||||    
T  3333027 tgca 3333024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 6842384 - 6842306
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttag 233  Q
    ||||||||||||||||||| ||  ||| ||| ||||| || ||||||||| |||||| || ||||||||||||||||||    
T  6842384 ggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaattttag 6842306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 8660304 - 8660211
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    ||||||||||||||||||| | | ||| ||| |||||||| ||||||| | ||||||||||| ||||| |||||||   ||||||||||||||||    
T  8660304 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaatttt-gacccctaagtaccaaaaccacaatttagcccccctaagatttagc 8660211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 29473082 - 29473180
Alignment:
Q  160 aagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgca 258  Q
    |||||||||||||| ||||||| ||||||||| || |||||||||| ||||| | |||||||  |||||||| |||| | |||| || |||| ||||||    
T  29473082 aagtgcacttttccccccttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccctccaagaattggcccctttgca 29473180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 16703570 - 16703659
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagattta 247  Q
    ||||||||||||||||||| ||  ||  ||| |||||||| |||||||| |||  ||| |||||||||||||||||||||||||||| |||||    
T  16703570 ggctaaagtgcacttttccccc--tatctttcaaaaacttgcaattttgatcca-taaatacaaaaactacaattttagccccctaaaattta 16703659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 34834677 - 34834584
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||  || ||| ||| |||||||| |||||||| || ||||||||  ||||| |||||||   ||||||||||||||||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagccc 34834584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 3721612 - 3721708
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||  ||| ||| |||||||| ||||||||  ||||||||||| ||||| | |||||   |||| |||||||||||||    
T  3721612 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagccc 3721708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 26575123 - 26575063
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagattta 247  Q
    |||||||| |||||||   ||| |||||||||||||||||||||| |||||||||||||||    
T  26575123 aaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagattta 26575063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 12350832 - 12350898
Alignment:
Q  189 aaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttg 256  Q
    |||||| ||||||||  |||||| ||| |||||||||||||||| |||||||||||||||||| ||||    
T  12350832 aaacttgcaattttga-cccctatgtataaaaactacaattttaaccccctaagatttagcccctttg 12350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 26574619 - 26574721
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| ||| |||||  ||| ||| |||||||| ||||||||  || ||||||||||||||||| |||||   ||| ||||||||||||| ||    
T  26574619 ggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactac-attttgatcccttaagatttagcccctt 26574717  T
Q  255 tgca 258  Q
    ||||    
T  26574718 tgca 26574721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 27448014 - 27447965
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttgg 204  Q
    ||||||||||||||||||| ||||||| ||||||||| || |||||||||    
T  27448014 ggctaaagtgcacttttccccccttaagttttaaaaagttacaattttgg 27447965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 30495797 - 30495695
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagcccc-ctaagatttagcccat 253  Q
    ||||||||||||||||| | ||  ||| ||| ||||| || | |||||  ||||||| |||||||||  |||||||| ||||| ||||||||||||||||    
T  30495797 ggctaaagtgcactttttcccc--taactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccctctaagatttagcccat 30495700  T
Q  254 ttgca 258  Q
    |||||    
T  30495699 ttgca 30495695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 3722608 - 3722533
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattt 230  Q
    |||||||||||||||||||  || ||| ||| |||||||| ||||||||  || |||||||| ||||| |||||||    
T  3722608 ggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

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Target: scaffold0320 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 19488 - 19594
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||| |||||| ||||||||||| |||| ||| ||||||||| |||||||||| |||||||||||||||   ||||||||||||| ||| ||    
T  19488 ggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccctt 19587  T
Q  255 tgcatct 261  Q
    |||||||    
T  19588 tgcatct 19594  T

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Target: scaffold2034 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 233 - 337
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||||||||| || ||||||| ||| ||||| || |||||||||||||||| |||||||||||| |||||| | ||||||||| ||||||| ||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccctt 332  T
Q  255 tgcat 259  Q
    |||||    
T  333 tgcat 337  T

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Target: scaffold2034; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 1058 - 975
Alignment:
Q  176 ccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgcat 259  Q
    |||||| ||||||||| || ||||||||||||| || |||||||||||| |||||| |||||| |||| ||||||| |||||||    
T  1058 ccttaacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccccaagaattagcccctttgcat 975  T

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Target: scaffold0294 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 5539 - 5443
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||||||| |||||||| ||||||||  ||| ||||||||||||||||||||||  |||| |||||||||||||    
T  5539 ggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagccc 5443  T

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Target: scaffold0294; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 4442 - 4538
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||| ||| | ||| ||||||| |||||||| ||||||| | ||| |||||||||||| |||||||||| |||||||| |||||||||    
T  4442 ggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagccc 4538  T

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Target: scaffold0586 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 6346 - 6449
Alignment:
Q  158 taaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatttgc 257  Q
    |||||||||||||||| ||||||| ||| ||||| || | ||||| | |||||| |||||||||||||||||||  |||||||||||||||||  |||||    
T  6346 taaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagcctttttgc 6445  T
Q  258 atct 261  Q
    ||||    
T  6446 atct 6449  T

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Target: scaffold1303 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 1439 - 1545
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    |||||||||| |||||||| ||  ||| ||| |||||||| ||||||||  |||||| ||| |||||||| ||||||  |||||||||||||||||||||    
T  1439 ggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccatt 1538  T
Q  255 tgcatct 261  Q
    |||||||    
T  1539 tgcatct 1545  T

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Target: scaffold0045 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||| | ||||||||  ||||||||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

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Target: scaffold0632 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 3408 - 3306
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||| |||||| |||  |||||||| ||||||||  ||| || |||||||||||| |||||| | ||||||||||||||||| ||    
T  3408 ggctaaagtgcacttttccccccttactttc-aaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccctt 3310  T
Q  255 tgca 258  Q
    ||||    
T  3309 tgca 3306  T

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Target: scaffold0112 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 37148 - 37243
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||||   |||| ||||| || ||||||||  ||||||||||||||||| |||||||| |||||||| ||||||||||    
T  37148 ggctaaagtgcacttttcc-ccctatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagccc 37243  T

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Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 49534 - 49431
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||||||  ||||||| ||| ||||| || ||||||||| ||||||   | |||||||||||||||  |||||||||||||||| | ||    
T  49534 ggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctt 49435  T
Q  255 tgca 258  Q
    ||||    
T  49434 tgca 49431  T

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Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 39344 - 39393
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttgg 204  Q
    ||||||||||||||||||| ||||||| ||||||||| || |||||||||    
T  39344 ggctaaagtgcacttttccccccttaagttttaaaaagttacaattttgg 39393  T

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Target: scaffold0093 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 2564 - 2472
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    |||||||||||||||||| |||| | |||  |||||||| ||||||||  ||||||||||||||||| || ||||| |||||||| ||||||||    
T  2564 gctaaagtgcacttttcc-ccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 2472  T

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Target: scaffold0093; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 7187 - 7095
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagc 249  Q
    |||||||||||||||||| |||| | |||  |||||||| ||||||||  ||||||||||||||||| || ||||| |||||||| ||||||||    
T  7187 gctaaagtgcacttttcc-ccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 7095  T

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Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 7516 - 7413
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcccatt 254  Q
    ||||||||||||||| ||| ||  ||| ||| ||||| || | ||||||  |||||| ||||| |||||||||||||  |||||||||||||||||| ||    
T  7516 ggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccctaagatttagcccctt 7417  T
Q  255 tgca 258  Q
    ||||    
T  7416 tgca 7413  T

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Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 7588 - 7632
Alignment:
Q  206 cccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||| | |||||||||||||||||||| ||||| |||||||||    
T  7588 cccctatgaacaaaaactacaattttagctccctacgatttagcc 7632  T

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Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 3707 - 3770
Alignment:
Q  187 aaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagcc 250  Q
    |||||||| ||||||||| ||||| |||| | |||||| |||||||| ||||||||||||||||    
T  3707 aaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagcc 3770  T

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Target: scaffold0059; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 4829 - 4755
Alignment:
Q  156 gctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaatttt 231  Q
    ||||||||||||||| || |||| || |||||||||| | ||||||||| ||||||| |||| |||||||||||||    
T  4829 gctaaagtgcactttccctccct-aacttttaaaaacatgcaattttggccccctaaatacagaaactacaatttt 4755  T

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Target: scaffold0186 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 23081 - 23175
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||  ||| ||| ||| |||||||| ||||||||  || |||||||| ||||| ||||| ||   |||||||| ||||||||    
T  23081 ggctaaagtgcacttttc--cccctaactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagccc 23175  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 220 - 124
Alignment:
Q  155 ggctaaagtgcacttttccacccttaatttttaaaaactttcaattttggtcccctaagtacaaaaactacaattttagccccctaagatttagccc 251  Q
    ||||||||||||||||||| ||| ||| ||| ||||  || | ||||||| |||| | |||  ||||| |||||||| |||||||| | ||||||||    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccc 124  T

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