View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5113_low_5 (Length: 251)
Name: NF5113_low_5
Description: NF5113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5113_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 247
Target Start/End: Original strand, 15419404 - 15419649
Alignment:
| Q |
2 |
ttgtgttttcgacaaaatggtacccataactgcaaacatagataagttggttgtgtattatcatgaatctaaacagactaaaacatgctacattgaacaa |
101 |
Q |
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| T |
15419404 |
ttgtgttttcgacaaaatggtacccataactgcaaacatggattagttggttgtgtattatcatgaatctaaacagactaaaacatgctaaattgaacaa |
15419503 |
T |
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| Q |
102 |
aatgcttatatgtgaaacatgttccttattaaagaatataaacaaacctcggcaaatttcacagcttcagccatggcttcaaaagtgagaatggcaccac |
201 |
Q |
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| T |
15419504 |
aatgcttatatgtgaaacatgttccttattaaagaatataaacaaacctcggcaaatttcacagcttcagccatggcttcaaaagtgagaatggcaccac |
15419603 |
T |
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| Q |
202 |
catcatctgaaatatagcatgagaccttttcaatagtataatctac |
247 |
Q |
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| T |
15419604 |
catcatctgaaatatagcatgagaccttttcaataggataatctac |
15419649 |
T |
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