View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5113_low_8 (Length: 241)
Name: NF5113_low_8
Description: NF5113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5113_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 67 - 240
Target Start/End: Complemental strand, 49012607 - 49012434
Alignment:
| Q |
67 |
attggtgttttgaggaatcaaccccaatcatggcctctttcccccaccaaacaagcttaattaccatcttcactaaaactcatgtgttagatatttgggt |
166 |
Q |
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| T |
49012607 |
attggtgttttgaggaatcaactccaatcatggcctctttcccccaccaaacaagcttaattaccatcttcactaaaactcatgtgttagatatttgggt |
49012508 |
T |
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| Q |
167 |
acatcccaaatttttatctgtaagaaagaatacatgttgacaacataggaaatttttattccacctttgcttct |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
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| T |
49012507 |
acatcccaaatttttatctgtaagaaagaatacatgttgacaacataggaaatttttattccacttttgattct |
49012434 |
T |
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