View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5117_high_7 (Length: 305)

Name: NF5117_high_7
Description: NF5117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5117_high_7
NF5117_high_7
[»] chr7 (1 HSPs)
chr7 (14-305)||(1257560-1257851)


Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 14 - 305
Target Start/End: Original strand, 1257560 - 1257851
Alignment:
Q  14 agatgagtaaaactagacaatgaggcattaaacccacactctatttgtagcccctctaatggcaaagggtcgtgattaaggaagcacatattgtggaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1257560 agatgagtaaaactagacaatgaggcattaaacccacactctatttgtagcccctctaatggcaaagggtcgtgattaaggaagcacgtattgtggaaag 1257659  T
Q  114 gttgtccactatgaaccctgtcaacggatcatgtcataaagttgaagctgacagtcgaatatgggatggcacaaacacctcaacaaggaaaaaccaacac 213  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1257660 gttgtccactatgaaccttgtcaacggatcatgtcataaagttgaagctgacagtcgaatctgggatggcacaaacacctcaacaaggaaaaaccaacac 1257759  T
Q  214 acatcttgcagaaaaagccgagagaggctatagactattggccatgtcgtttaggccaacatgaaattttgcctataaatacctatcataat 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1257760 acatcttgcagaaaaagccgagagaggctatagactattggccatgtcgtttaggccaacatgaaattttgcctataaatacctatcataat 1257851  T

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