View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5118-Insertion-2 (Length: 432)
Name: NF5118-Insertion-2
Description: NF5118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5118-Insertion-2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 342; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 60 - 432
Target Start/End: Original strand, 2170295 - 2170661
Alignment:
| Q |
60 |
ttcatttgaaattttcagagttagttagtttgaacaacacagattctggctatgacaaaggtattaatatttctatttaccaaatcatccttgtcttaac |
159 |
Q |
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| T |
2170295 |
ttcatttgaaattttcagagttagttagtttgaacaacacagattctggctatgacaaaggtattaatatttctatttaccaaatcatccttgtcttaac |
2170394 |
T |
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| Q |
160 |
caaattgaatatctcatttgtcacatttacatgttacatacatctccaaagtcactgtttctccaaaatggcatctcatgtatgtgtctctccttttcct |
259 |
Q |
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| T |
2170395 |
caaattgaatatctcatttgtcacatttacatgttacatacatctccaaagtcactgtttcaccaaaatggcatctcatgtatgtgtctc------tcct |
2170488 |
T |
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| Q |
260 |
tttctctttacattcaagttgtcaacattttaatgtcatatatcttatggtgtactcttcattgcattcaaatcataatgtatagctgattattactaat |
359 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2170489 |
tttctctttacattcaagttgtcaacattttaatgtcatatatcttatggtatactcttcattgcattcaaatcataatgtatagctgattattactaat |
2170588 |
T |
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| Q |
360 |
gcatctatattatattttcattcatccattatgtgttccaggtcaatctttattcctataaatataaataaca |
432 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2170589 |
gcatctatattatattttcattcatccattatgtgttccaggtcaatctttattcctataaatataaataaca |
2170661 |
T |
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