View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5118-Insertion-3 (Length: 308)
Name: NF5118-Insertion-3
Description: NF5118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5118-Insertion-3 |
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Alignment Details
Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 15154886 - 15154604
Alignment:
| Q |
1 |
gatggaaaatgttaatttaccaaatgcaaaattagggcacgtgacacatgtggaagtcacatgggagggaccttccaattctattgcctacttcccttgg |
100 |
Q |
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| T |
15154886 |
gatggaaaatgttaatttaccaaatgcaaaattaggacacgtgacacatgtggaagtcacatgggagggaccttccaattctattgcctacttcccttgg |
15154787 |
T |
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| Q |
101 |
attcaatcccttcttctacagggatggtttagtgatagtccttaaatataagtacatgttctacttcttcctcttcctctacactcacacaacaattcac |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
15154786 |
attcaatcccttcttctacagggatggtttggtgatagtccttaaatataagtacatgttctacttcttcctcttcctctacaatcacacaacaattcac |
15154687 |
T |
|
| Q |
201 |
cacctttgacgtcgcttacagttgcagaaagacagtgactactcagtaaaacctaatggctcctagtacgtactaacattaac |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15154686 |
cacctttgacgtcgcttacagttgcagaaagacagtgactactcagtaaaacctaatggctcctagtacgtactaacattaac |
15154604 |
T |
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