View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5118-Insertion-6 (Length: 468)

Name: NF5118-Insertion-6
Description: NF5118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5118-Insertion-6
NF5118-Insertion-6
[»] chr8 (33 HSPs)
chr8 (9-246)||(2535418-2535655)
chr8 (274-468)||(2535683-2535877)
chr8 (386-468)||(34177215-34177297)
chr8 (380-468)||(15230168-15230256)
chr8 (385-468)||(35634341-35634424)
chr8 (375-468)||(7294202-7294295)
chr8 (387-468)||(42945215-42945296)
chr8 (380-468)||(42945351-42945439)
chr8 (390-468)||(41353820-41353898)
chr8 (387-468)||(10445579-10445660)
chr8 (380-468)||(25124800-25124888)
chr8 (380-468)||(27500325-27500413)
chr8 (380-468)||(44664609-44664697)
chr8 (397-468)||(8997943-8998014)
chr8 (384-468)||(15230032-15230116)
chr8 (380-468)||(37542462-37542550)
chr8 (389-468)||(34176542-34176621)
chr8 (380-462)||(21432930-21433012)
chr8 (382-468)||(39474647-39474732)
chr8 (387-432)||(27500225-27500270)
chr8 (389-434)||(34666461-34666506)
chr8 (389-434)||(11761975-11762020)
chr8 (389-434)||(34213899-34213944)
chr8 (389-434)||(34665905-34665950)
chr8 (387-468)||(37542325-37542406)
chr8 (380-468)||(6471791-6471879)
chr8 (390-429)||(38003701-38003740)
chr8 (390-468)||(21432794-21432872)
chr8 (389-431)||(34214448-34214490)
chr8 (391-432)||(7983565-7983606)
chr8 (391-468)||(25124664-25124741)
chr8 (387-468)||(38003556-38003637)
chr8 (387-432)||(44664752-44664797)
[»] chr4 (48 HSPs)
chr4 (9-246)||(11446592-11446828)
chr4 (274-456)||(11446392-11446564)
chr4 (380-468)||(52573329-52573417)
chr4 (380-468)||(27069011-27069099)
chr4 (376-468)||(32063571-32063663)
chr4 (380-468)||(51859508-51859596)
chr4 (375-468)||(30641619-30641711)
chr4 (380-468)||(27891685-27891773)
chr4 (380-468)||(54858661-54858749)
chr4 (387-468)||(50503926-50504007)
chr4 (380-468)||(10408126-10408214)
chr4 (380-468)||(39667013-39667101)
chr4 (380-468)||(39701010-39701098)
chr4 (387-468)||(54858804-54858885)
chr4 (387-468)||(52573472-52573553)
chr4 (388-468)||(148002-148082)
chr4 (384-468)||(10407990-10408074)
chr4 (380-468)||(22718176-22718264)
chr4 (386-434)||(23455089-23455137)
chr4 (380-468)||(40316902-40316990)
chr4 (380-468)||(40326976-40327064)
chr4 (380-468)||(45463310-45463398)
chr4 (380-468)||(50504062-50504150)
chr4 (381-468)||(9731450-9731537)
chr4 (387-468)||(27069154-27069235)
chr4 (387-432)||(39666913-39666958)
chr4 (387-468)||(39701153-39701234)
chr4 (387-468)||(45463174-45463255)
chr4 (388-468)||(147420-147500)
chr4 (392-468)||(5818024-5818100)
chr4 (380-468)||(22986952-22987040)
chr4 (385-468)||(51859649-51859731)
chr4 (389-467)||(23455609-23455687)
chr4 (388-434)||(52815798-52815844)
chr4 (387-432)||(11524086-11524131)
chr4 (387-468)||(22718040-22718121)
chr4 (387-468)||(22987095-22987176)
chr4 (389-434)||(38982516-38982561)
chr4 (389-434)||(52816343-52816388)
chr4 (389-434)||(56556717-56556762)
chr4 (428-468)||(30642433-30642473)
chr4 (388-468)||(50751745-50751825)
chr4 (377-468)||(39538181-39538272)
chr4 (389-468)||(55867362-55867441)
chr4 (380-426)||(11524186-11524232)
chr4 (391-468)||(3032683-3032760)
chr4 (389-434)||(38814247-38814292)
chr4 (389-434)||(56557245-56557290)
[»] chr5 (21 HSPs)
chr5 (371-468)||(11741747-11741844)
chr5 (380-468)||(17544285-17544373)
chr5 (380-468)||(20153155-20153243)
chr5 (384-468)||(22869706-22869790)
chr5 (387-468)||(17544149-17544230)
chr5 (381-434)||(22870374-22870427)
chr5 (387-432)||(20153055-20153100)
chr5 (387-468)||(33871440-33871521)
chr5 (395-468)||(33871590-33871663)
chr5 (400-468)||(8875550-8875618)
chr5 (388-431)||(21257408-21257451)
chr5 (390-432)||(21287904-21287946)
chr5 (389-434)||(20072256-20072301)
chr5 (389-434)||(20072789-20072834)
chr5 (387-468)||(22298643-22298724)
chr5 (389-434)||(36477296-36477341)
chr5 (389-434)||(39181192-39181237)
chr5 (389-434)||(39181716-39181761)
chr5 (389-431)||(36476903-36476945)
chr5 (389-434)||(16533545-16533590)
chr5 (387-468)||(20152882-20152962)
[»] chr7 (43 HSPs)
chr7 (384-468)||(12228486-12228570)
chr7 (384-468)||(18087581-18087665)
chr7 (380-468)||(25628579-25628667)
chr7 (380-468)||(42618148-42618236)
chr7 (380-468)||(46205546-46205634)
chr7 (372-434)||(4226260-4226322)
chr7 (384-468)||(5455928-5456012)
chr7 (380-468)||(10600186-10600274)
chr7 (372-468)||(47558131-47558227)
chr7 (389-468)||(18855902-18855981)
chr7 (381-468)||(28890680-28890767)
chr7 (385-468)||(32688462-32688545)
chr7 (387-468)||(18086390-18086471)
chr7 (387-468)||(25628722-25628803)
chr7 (364-449)||(47945468-47945553)
chr7 (364-449)||(47950898-47950983)
chr7 (372-468)||(12644036-12644132)
chr7 (372-468)||(13384603-13384699)
chr7 (380-468)||(22081660-22081748)
chr7 (380-468)||(32934585-32934673)
chr7 (391-468)||(46204522-46204599)
chr7 (388-468)||(23058674-23058754)
chr7 (380-468)||(32068333-32068421)
chr7 (380-468)||(45914625-45914713)
chr7 (380-465)||(25453365-25453450)
chr7 (387-468)||(32934449-32934530)
chr7 (387-468)||(33808424-33808505)
chr7 (387-468)||(42618012-42618093)
chr7 (391-468)||(43266514-43266591)
chr7 (384-468)||(25453229-25453313)
chr7 (380-468)||(43266367-43266455)
chr7 (385-468)||(32687498-32687581)
chr7 (389-468)||(43124400-43124479)
chr7 (387-468)||(32068197-32068278)
chr7 (388-468)||(33828219-33828299)
chr7 (394-468)||(39274971-39275045)
chr7 (385-431)||(4227088-4227134)
chr7 (389-434)||(22661492-22661537)
chr7 (389-434)||(27480122-27480167)
chr7 (389-434)||(27480667-27480712)
chr7 (384-432)||(23058566-23058614)
chr7 (386-468)||(12643201-12643283)
chr7 (428-468)||(12229359-12229399)
[»] chr6 (24 HSPs)
chr6 (380-468)||(15913785-15913873)
chr6 (384-468)||(8089544-8089628)
chr6 (380-468)||(31407115-31407203)
chr6 (380-468)||(12065321-12065409)
chr6 (380-467)||(7905480-7905567)
chr6 (387-468)||(22502875-22502956)
chr6 (380-468)||(7160905-7160993)
chr6 (380-468)||(21836132-21836219)
chr6 (380-464)||(22503011-22503095)
chr6 (387-468)||(7905344-7905425)
chr6 (387-468)||(21836274-21836355)
chr6 (387-468)||(6517603-6517684)
chr6 (387-468)||(31406979-31407060)
chr6 (389-432)||(14656617-14656660)
chr6 (390-468)||(7161051-7161129)
chr6 (388-434)||(20651145-20651191)
chr6 (389-434)||(14657129-14657174)
chr6 (389-434)||(33400101-33400146)
chr6 (388-468)||(13379729-13379809)
chr6 (375-434)||(3176289-3176348)
chr6 (393-468)||(20651899-20651974)
chr6 (389-431)||(4117467-4117509)
chr6 (387-432)||(10781402-10781447)
chr6 (387-468)||(15913649-15913730)
[»] chr2 (20 HSPs)
chr2 (371-468)||(6588784-6588881)
chr2 (372-468)||(202587-202683)
chr2 (380-468)||(15604576-15604664)
chr2 (381-468)||(8710706-8710793)
chr2 (373-468)||(25624337-25624432)
chr2 (380-468)||(41587335-41587423)
chr2 (380-468)||(11830465-11830553)
chr2 (384-468)||(25623389-25623473)
chr2 (389-468)||(199109-199188)
chr2 (387-468)||(8342288-8342369)
chr2 (375-468)||(41588290-41588383)
chr2 (384-432)||(8710605-8710653)
chr2 (384-468)||(15604440-15604524)
chr2 (372-468)||(25230203-25230299)
chr2 (389-468)||(39936495-39936574)
chr2 (389-434)||(20983181-20983226)
chr2 (389-434)||(21103216-21103261)
chr2 (389-434)||(29957952-29957997)
chr2 (389-434)||(29958467-29958512)
chr2 (389-434)||(20982659-20982704)
[»] chr1 (35 HSPs)
chr1 (375-468)||(32132405-32132498)
chr1 (380-468)||(8898618-8898706)
chr1 (392-468)||(37929519-37929595)
chr1 (387-468)||(7371391-7371472)
chr1 (380-468)||(35038556-35038644)
chr1 (380-468)||(40714545-40714633)
chr1 (387-468)||(12905903-12905984)
chr1 (380-468)||(28324905-28324993)
chr1 (380-468)||(31058294-31058382)
chr1 (364-468)||(35040835-35040939)
chr1 (380-468)||(49955448-49955536)
chr1 (381-468)||(5734951-5735038)
chr1 (387-468)||(45749943-45750024)
chr1 (387-468)||(49955591-49955672)
chr1 (388-468)||(46899847-46899927)
chr1 (386-468)||(5734110-5734192)
chr1 (387-468)||(40714688-40714768)
chr1 (392-468)||(45750091-45750167)
chr1 (389-445)||(50062868-50062924)
chr1 (387-468)||(17189055-17189136)
chr1 (401-468)||(31051051-31051118)
chr1 (390-468)||(20760752-20760830)
chr1 (279-333)||(48870564-48870618)
chr1 (387-468)||(8898761-8898842)
chr1 (387-468)||(28325048-28325129)
chr1 (389-434)||(46282206-46282251)
chr1 (389-434)||(49093176-49093221)
chr1 (389-434)||(49093733-49093778)
chr1 (279-330)||(35616579-35616630)
chr1 (384-434)||(13295270-13295320)
chr1 (389-431)||(46282713-46282755)
chr1 (9-58)||(32240279-32240328)
chr1 (389-434)||(50062338-50062383)
chr1 (392-432)||(30326633-30326673)
chr1 (388-468)||(46899162-46899242)
[»] scaffold0771 (1 HSPs)
scaffold0771 (384-468)||(1021-1105)
[»] chr3 (50 HSPs)
chr3 (384-468)||(9368544-9368628)
chr3 (384-468)||(13948881-13948965)
chr3 (380-468)||(40788657-40788745)
chr3 (387-468)||(29118639-29118720)
chr3 (380-468)||(3469301-3469389)
chr3 (367-431)||(35759027-35759091)
chr3 (387-468)||(35643952-35644033)
chr3 (387-468)||(41422073-41422154)
chr3 (380-468)||(29118775-29118863)
chr3 (388-468)||(37778518-37778598)
chr3 (382-468)||(52032239-52032325)
chr3 (382-455)||(3596348-3596421)
chr3 (376-468)||(6956349-6956442)
chr3 (355-428)||(41989502-41989575)
chr3 (376-468)||(1078637-1078729)
chr3 (380-468)||(29686042-29686130)
chr3 (390-468)||(3596210-3596288)
chr3 (387-468)||(3469444-3469525)
chr3 (387-468)||(10307619-10307700)
chr3 (381-446)||(29192905-29192970)
chr3 (392-468)||(11910800-11910876)
chr3 (380-468)||(32306525-32306613)
chr3 (386-434)||(32716384-32716432)
chr3 (380-468)||(47551594-47551682)
chr3 (384-431)||(40788558-40788605)
chr3 (389-434)||(1757224-1757269)
chr3 (384-468)||(29192136-29192220)
chr3 (388-468)||(32306669-32306749)
chr3 (376-468)||(43608717-43608809)
chr3 (389-468)||(32717025-32717104)
chr3 (382-432)||(43998384-43998434)
chr3 (389-434)||(1756685-1756730)
chr3 (389-434)||(2944048-2944093)
chr3 (389-434)||(2944586-2944631)
chr3 (381-434)||(10294696-10294749)
chr3 (389-434)||(11026552-11026597)
chr3 (389-434)||(37249718-37249763)
chr3 (389-434)||(45278679-45278724)
chr3 (389-434)||(45279204-45279249)
chr3 (389-434)||(48189019-48189064)
chr3 (387-432)||(52032383-52032428)
chr3 (388-468)||(4322692-4322772)
chr3 (388-432)||(43105370-43105414)
chr3 (279-330)||(17227753-17227804)
chr3 (381-452)||(44960293-44960364)
chr3 (387-468)||(10294804-10294884)
chr3 (389-434)||(37249334-37249379)
chr3 (389-434)||(43105754-43105799)
chr3 (387-468)||(43998246-43998327)
chr3 (389-434)||(48188513-48188558)
[»] scaffold0328 (2 HSPs)
scaffold0328 (380-468)||(11377-11465)
scaffold0328 (387-468)||(11241-11322)
[»] scaffold0042 (1 HSPs)
scaffold0042 (392-468)||(12029-12105)
[»] scaffold0006 (2 HSPs)
scaffold0006 (380-468)||(221891-221978)
scaffold0006 (387-468)||(222033-222114)
[»] scaffold0128 (1 HSPs)
scaffold0128 (377-468)||(19958-20049)
[»] scaffold0775 (3 HSPs)
scaffold0775 (390-468)||(6227-6305)
scaffold0775 (389-468)||(5063-5142)
scaffold0775 (9-58)||(6098-6147)
[»] scaffold0599 (1 HSPs)
scaffold0599 (392-468)||(2494-2570)
[»] scaffold0388 (1 HSPs)
scaffold0388 (380-468)||(12476-12564)
[»] scaffold0008 (1 HSPs)
scaffold0008 (427-468)||(238356-238397)


Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-112; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 2535418 - 2535655
Alignment:
Q  9 aattcaaaatccaccaacatttgattccaagagttgcttcatcatccaatgaacacaaagaaacaaacaaacaacatgaaatcattctgaacaattcatt 108  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2535418 aattccaaatccaccaacatttgattccaagagttgcttcatcatccaatgaacacagagaaacaaacaaacaacatgaaatcattctgaacaattcatt 2535517  T
Q  109 atgaacacaaattgaaacattctgaatgttcaattcattctgaatcgcaacacaaacgtcggttttggtgtagattcagatttggaaccatttttggaat 208  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  2535518 atgaacacgaattgaaacattatgaatgttcaattcattctgaatcgcaacacaaacgccggttttggtgtagattcgaatttggaaccatttttggaat 2535617  T
Q  209 caaccgcaacaccgccgtttcaattgctcaatgattag 246  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  2535618 caaccgcaacaccgccgtttcaattgctctatgattag 2535655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 274 - 468
Target Start/End: Original strand, 2535683 - 2535877
Alignment:
Q  274 ggagaagaggttgtgtagtgagtgatggttggggtttgaagaataagaaggagaagaggatgtgggtttgaacagtgcacgtatgcattattcaaagaaa 373  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  2535683 ggagaagaggctgtgtactgagtgatggttggggtttgaagaataagaaggagaagaggacgagggtttgaacagtgcacgtatgcattattcaaagaaa 2535782  T
Q  374 gaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  2535783 gaagaaggatgatgagtgtatttttgtccattcccatgccattttactaatttgatgatgtggcagtcattaagtgggtcaagggacgaaatttt 2535877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 386 - 468
Target Start/End: Original strand, 34177215 - 34177297
Alignment:
Q  386 tgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  34177215 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtggcagtcattaagtgggtcaagggacgaaatttt 34177297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 15230168 - 15230256
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  15230168 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaatttt 15230256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 385 - 468
Target Start/End: Original strand, 35634341 - 35634424
Alignment:
Q  385 atgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||| || ||||||||||||    
T  35634341 atgagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggttaaaggacgaaatttt 35634424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 7294295 - 7294202
Alignment:
Q  375 aagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||  | ||||| ||||| |||||||| ||| ||||||||    
T  7294295 aagaaggatgatgaggttatttttgtccattcttatgccattttgctaatttgatgatctgacagtgattaactgggtcaaaggatgaaatttt 7294202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 42945296 - 42945215
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |  |||| ||||||| |||||| ||||||||||||    
T  42945296 gagggtatttttgtccattcccatgccattttactaatttgatgacttggcagtgattaagttggtcaaaggacgaaatttt 42945215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 42945351 - 42945439
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||| |  |||| ||||||| ||||||  |||||||||||    
T  42945351 ggatgacgagggtatttttgtccattcccatgccattttactaatttgatgacttggcagtgattaagttggtcaaatgacgaaatttt 42945439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 390 - 468
Target Start/End: Original strand, 41353820 - 41353898
Alignment:
Q  390 ggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| || || ||||||| |||||| ||||||||||||    
T  41353820 ggtatttttgtccattctcatgtcattttgctaatttgatgacgtgacggtgattaagttggtcaaaggacgaaatttt 41353898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 10445579 - 10445660
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||  |||| ||||||| ||||||  |||||||||||    
T  10445579 gagggtatttttgtccatttccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaatttt 10445660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 25124800 - 25124888
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| |||| |||||| |||||||||||||||  |||| ||||||| | |||| ||| ||||||||    
T  25124800 ggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaagttgttcaaaggatgaaatttt 25124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 27500325 - 27500413
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| ||||||||||||| |||||| ||||| ||||| ||||||||||||||| ||||| ||||||| ||||||  || ||||||||    
T  27500325 ggatgacgagggtatttttgcccattcccatgcaatttttctaatttgatgacgtgacagtgattaagttggtcaaatgatgaaatttt 27500413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 44664697 - 44664609
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||| ||||||||||||||| | ||||||||| |||||||||||||||  |||| ||||||| ||||||  |||||||||||    
T  44664697 ggatgacgaggatatttttgtccattcccgtgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaatttt 44664609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 397 - 468
Target Start/End: Original strand, 8997943 - 8998014
Alignment:
Q  397 ttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| |||||| ||||| ||||||    
T  8997943 ttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacggaatttt 8998014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 15230116 - 15230032
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| || |   ||| ||||||| | |||| ||||||||||||    
T  15230116 gatgagggtatttttgtccattcccatgccattttgctaatttgataacttggtagtgattaagttgatcaaaggacgaaatttt 15230032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 37542462 - 37542550
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| ||||||||||||||||||||| ||| |||||| ||||||  |||||||   ||| ||||||| |||||| ||||||||||||    
T  37542462 ggatgacgagggtatttttgtccattctaatgtcattttgctaattcaatgacgttggagtgattaagttggtcaaaggacgaaatttt 37542550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 468
Target Start/End: Complemental strand, 34176621 - 34176542
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||| ||| || |||||||| ||||||||||||| | ||||| ||||| |||||||| ||| ||||||||    
T  34176621 gggtatttttgtcctttcccaagccattttgctaatttgatgacctgacagtgattaactgggtcaaaggatgaaatttt 34176542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 462
Target Start/End: Original strand, 21432930 - 21433012
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacga 462  Q
    |||||| |||||||||||| ||||||| |||| |||||| |||||||||| ||||  |||| ||||||| |||||| ||||||    
T  21432930 ggatgacgagggtatttttatccattcccatgtcattttgctaatttgataacgtgtcagtgattaagttggtcaaaggacga 21433012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 468
Target Start/End: Complemental strand, 39474732 - 39474647
Alignment:
Q  382 atgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||||||||||||||  ||||||||||| |||||||||||| ||  |||| ||||||| ||||||  |||||||||||    
T  39474732 atgacgagggtatttttgtccatttccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaa-agacgaaatttt 39474647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 432
Target Start/End: Complemental strand, 27500270 - 27500225
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||    
T  27500270 gagggtatttttgtccattctcatgtcattttgctaatttgatgac 27500225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 34666461 - 34666506
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||    
T  34666461 gggtatttttgtcaattctcatgccattttgctaatttgatgacgt 34666506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 11762020 - 11761975
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||    
T  11762020 gggtatttttgtccattcccatgctattttgctaatttgatgacgt 11761975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 34213944 - 34213899
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  34213944 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 34213899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 34665950 - 34665905
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  34665950 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 34665905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 37542406 - 37542325
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||| ||||| |||||||||||  |||||||||||| |  | || ||||||| |||||| | ||||||||||    
T  37542406 gagggtatttttgttcattcccatgccattttgttaatttgatgacttggcggtgattaagttggtcaaagaacgaaatttt 37542325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 6471879 - 6471791
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||| ||||||| ||||||| |||| |||||| |||||||||||||||  |||| ||||||| | | ||  |||||||||||    
T  6471879 ggatgacgaggatatttttatccattcccatgtcattttgctaatttgatgacgtggcagtgattaagttgataaaaagacgaaatttt 6471791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 429
Target Start/End: Original strand, 38003701 - 38003740
Alignment:
Q  390 ggtatttttgtccattctcatgccattttactaatttgat 429  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  38003701 ggtatttttgtctattctcatgccattttgctaatttgat 38003740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 21432872 - 21432794
Alignment:
Q  390 ggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||  ||||||||||| ||||||||||||| |   ||| |||||||  |||||  |||||||||||    
T  21432872 ggtatttttgtccatttccatgccattttgctaatttgatgacttgggagtgattaagttagtcaaaagacgaaatttt 21432794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 34214448 - 34214490
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatga 431  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||    
T  34214448 gggtatttttgtcaattcccatgccattttgctaatttgatga 34214490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 7983606 - 7983565
Alignment:
Q  391 gtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    ||||||||||||||| ||||| |||||| |||||||||||||    
T  7983606 gtatttttgtccattttcatgtcatttttctaatttgatgac 7983565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 25124741 - 25124664
Alignment:
Q  391 gtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||| |||| |||  |||||| ||||||||||||| |  ||||  |||||| |||||| ||||||||||||    
T  25124741 gtatttttgtcaattcccatatcattttgctaatttgatgacttggcagtggttaagttggtcaaaggacgaaatttt 25124664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 38003637 - 38003556
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||   || ||||||| ||||||||||||| |   ||| ||||||| |||||| | ||||||||||    
T  38003637 gagggtatttttgtccatttctataccattttgctaatttgatgacttagtagtgattaagttggtcaaagaacgaaatttt 38003556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 432
Target Start/End: Original strand, 44664752 - 44664797
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    |||| ||||||||||||||| ||||||||||| ||||| |||||||    
T  44664752 gaggatatttttgtccattcccatgccattttgctaatctgatgac 44664797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 178; Significance: 8e-96; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 11446828 - 11446592
Alignment:
Q  9 aattcaaaatccaccaacatttgattccaagagttgcttcatcatccaatgaacacaaagaaacaaacaaacaacatgaaatcattctgaacaattcatt 108  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  11446828 aattccaaatccaccaacatttgattccaagacttgcttcatcatccaatgaacacaaagaaacaaacaatcaacaagaaatcattttgaacaattcatt 11446729  T
Q  109 atgaacacaaattgaaacattctgaatgttcaattcattctgaatcgcaacacaaacgtcggttttggtgtagattcagatttggaaccatttttggaat 208  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| ||| ||||||||||||||||||    
T  11446728 atgaacacgaattgaa-cattctgaatgttcaattcattctgaatcgcaacaaaaacgccgtttttggtgtagattcggatctggaaccatttttggaat 11446630  T
Q  209 caaccgcaacaccgccgtttcaattgctcaatgattag 246  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  11446629 caaccgcaacgccgccgtttcaattgctctatgattag 11446592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 274 - 456
Target Start/End: Complemental strand, 11446564 - 11446392
Alignment:
Q  274 ggagaagaggttgtgtagtgagtgatggttggggtttgaagaataagaaggagaagaggatgtgggtttgaacagtgcacgtatgcattattcaaagaaa 373  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||| ||    
T  11446564 ggagaagaggctgtgtagtgagtgatggttggggtttgaagaatgagaaggagaagaggacgagggtttgaacactgcacgtatgcattattcaaaggaa 11446465  T
Q  374 gaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaag 456  Q
    ||||||||||||||||||||||||||          || |||||| ||||||||||||| | |||||||||||||| ||||||    
T  11446464 gaagaaggatgatgagggtatttttg----------tgtcattttgctaatttgatgacttgacagtcattaagtgagtcaag 11446392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 52573417 - 52573329
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  52573417 ggatgacgagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaatttt 52573329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 27069099 - 27069011
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  27069099 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaatttt 27069011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 376 - 468
Target Start/End: Original strand, 32063571 - 32063663
Alignment:
Q  376 agaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  || | |||||||| ||  ||||||| ||||||    
T  32063571 agaaggatgatgagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcaataattaagtgcgtgcagggacggaatttt 32063663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 51859596 - 51859508
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||  |||| ||||||| |||||| ||||||||||||    
T  51859596 ggatgacgagggtatttttgtccattctcatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaaggacgaaatttt 51859508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 30641711 - 30641619
Alignment:
Q  375 aagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||| |||||||||||| |||| |||||| ||||||||||||||| ||||| ||||||| |||  ||||||||||||||    
T  30641711 aagaaggatgatgagggtaattttgtccattcccatgacattttgctaatttgatgacgtgacagtaattaagt-ggtgtagggacgaaatttt 30641619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 27891773 - 27891685
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||| ||||||||||||||| |||| |||||| ||||||||||||||| ||||| ||||||| |||||| ||||||||||||    
T  27891773 ggatgacgaggatatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaatttt 27891685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 54858749 - 54858661
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  54858749 ggatgatgagggtatttttgtctgttcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaatttt 54858661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 50504007 - 50503926
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||| ||||||    
T  50504007 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacggaatttt 50503926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 10408126 - 10408214
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| ||||||||||||||||||||||||  |||||| |||||||||||| ||  |||| ||||||| |||||| ||||||||||||    
T  10408126 ggatgacgagggtatttttgtccattctcatatcattttgctaatttgatgatgtggcagtgattaagttggtcaaaggacgaaatttt 10408214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 39667013 - 39667101
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||||||||  | || ||||||| ||||||  |||||||||||    
T  39667013 ggatgacgatggtatttttgtccattctcatgccattttgctaatttgatgacgtggcggtgattaagttggtcaaaagacgaaatttt 39667101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 39701098 - 39701010
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||| | ||| ||||||| |||||| ||| ||||||||    
T  39701098 ggatgacgagggtgtttttgtccattcccatgccattttgctaatttgatgacgtgagagtgattaagttggtcaaaggatgaaatttt 39701010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 54858804 - 54858885
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |   ||| ||||||| |||||| ||||||||||||    
T  54858804 gagggtatttttgtccattcacatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaatttt 54858885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 52573472 - 52573553
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||  |||| ||||| | | |||| ||||| ||||||    
T  52573472 gagggtatttttgtccattctcatgccatattgctaatttgatgacgtggcagtgattaaattgatcaaaggacggaatttt 52573553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 148002 - 148082
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||| ||||| ||||| ||||   | ||||||||||||    
T  148002 agggcatttttgtccattttcatgccattttgctaatttgatgacgtgacagtaattaactgggctcatggacgaaatttt 148082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 10408074 - 10407990
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||| |   ||| ||||||| | |||| ||||||||||||    
T  10408074 gatgagggtatttttgtccatttccatgccattttgctaatttgatgacttggtagtgattaagttgatcaaaggacgaaatttt 10407990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 22718176 - 22718264
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| |||| |||||| |||||||||||||||  | || ||||| | ||||||  |||||||||||    
T  22718176 ggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgtcggtgattaaattggtcaaatgacgaaatttt 22718264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 23455137 - 23455089
Alignment:
Q  386 tgagggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  23455137 tgagggtatttttgtccattcccatgccattttgctaatttgatgacgt 23455089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 40316902 - 40316990
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||||||||| ||   ||| ||||||| |||  ||||||| ||||||    
T  40316902 ggatgatgagggtatttttgtccattcccatgtcattttgctaatttgatgatgtggtagtaattaagtaggtgtagggacggaatttt 40316990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 40326976 - 40327064
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||||||||| ||   ||| ||||||| |||  ||||||| ||||||    
T  40326976 ggatgatgagggtatttttgtccattcccatgtcattttgctaatttgatgatgtggtagtaattaagtaggtgtagggacggaatttt 40327064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 45463310 - 45463398
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||   ||| ||||||| |||||| | || |||||||    
T  45463310 ggatgacgagggtgtttttgtccattcccatgccattttgctaatttgatgacgtggtagtgattaagttggtcaaagaacaaaatttt 45463398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 50504062 - 50504150
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| |||| |||||| ||||||||||||| |   ||| |||||||  ||||| ||||||||||||    
T  50504062 ggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacttgggagtgattaagtttgtcaaaggacgaaatttt 50504150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 468
Target Start/End: Original strand, 9731450 - 9731537
Alignment:
Q  381 gatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||| |||| ||||||||| ||||| ||||||||||| |||||||||||||||  |||| |||||||  ||||| | ||||||||||    
T  9731450 gatgacgaggatatttttgttcattcccatgccattttgctaatttgatgacgtggcagtgattaagttagtcaaagaacgaaatttt 9731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 27069154 - 27069235
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |  | || ||||| | ||||||  |||||||||||    
T  27069154 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggcggtgattaaattggtcaaaagacgaaatttt 27069235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 432
Target Start/End: Complemental strand, 39666958 - 39666913
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  39666958 gagggtatttttgtccattcccatgccattttgctaatttgatgac 39666913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 39701153 - 39701234
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||||| |  |||| ||||||| ||||||  |||||||||||    
T  39701153 gagggtatttttgtccattcccatactattttgctaatttgatgacttggcagtgattaagttggtcaaatgacgaaatttt 39701234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 45463255 - 45463174
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||| |   ||| ||||||| ||||||  |||||||||||    
T  45463255 gagggtatttttgtccattcccatgctattttgctaatttgatgacttggtagtgattaagttggtcaaatgacgaaatttt 45463174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 147500 - 147420
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||||  |||| ||||| ||||   |||||| |||||||    
T  147500 agggcatttttgtccattcccatgccattttgctaatttgatgacgtggcagtaattaattgggctcagggacaaaatttt 147420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 468
Target Start/End: Original strand, 5818024 - 5818100
Alignment:
Q  392 tatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||| |||| ||||||||||| ||||||||| ||| | ||||| ||||||| |||||| ||| ||||||||    
T  5818024 tatttttgtctattcccatgccattttgctaatttgaagacttgacagtgattaagttggtcaaaggatgaaatttt 5818100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 22987040 - 22986952
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| ||||||||||||||| |||| |||| |||||| |||||||||||||||  | || ||||| | ||||||  |||||||||||    
T  22987040 ggatgacgagggtatttttgtctattcccatgtcattttgctaatttgatgacgtgtcggtgattaaattggtcaaatgacgaaatttt 22986952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 468
Target Start/End: Original strand, 51859649 - 51859731
Alignment:
Q  385 atgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||| |   ||| ||||||| | |||| ||||||||||||    
T  51859649 atgagggtatttt-gtccattcccatgccattttgctaatttgatgacttgggagtgattaagttgatcaaaggacgaaatttt 51859731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 467
Target Start/End: Original strand, 23455609 - 23455687
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaattt 467  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||  |||| |||||  |||   |||||||||||||    
T  23455609 gggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaatcgggaagagggacgaaattt 23455687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 52815844 - 52815798
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||    
T  52815844 agggtatttttgtcaattcccatgccattttgctaatttgatgacgt 52815798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 432
Target Start/End: Complemental strand, 11524131 - 11524086
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||    
T  11524131 gagggtatttttgtctattcccatgccattttgctaatttgatgac 11524086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 22718121 - 22718040
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||| ||||| || ||||||| ||||||||||||| |    || ||||||| |||||| ||||||||||||    
T  22718121 gagggtatttttgtctattcttataccattttgctaatttgatgacttggtggtgattaagttggtcaaaggacgaaatttt 22718040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 22987095 - 22987176
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||| ||||| || ||||||| ||||||||||||| |    || ||||||| |||||| ||||||||||||    
T  22987095 gagggtatttttgtctattcttataccattttgctaatttgatgacttggtggtgattaagttggtcaaaggacgaaatttt 22987176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 38982516 - 38982561
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  38982516 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 38982561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 52816343 - 52816388
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  52816343 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 52816388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 56556762 - 56556717
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  56556762 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 56556717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 468
Target Start/End: Original strand, 30642433 - 30642473
Alignment:
Q  428 atgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  30642433 atgacgtggcagtcattaagtgggtcaagggacgaaatttt 30642473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 50751745 - 50751825
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||||||||| ||||| |||||  ||||||||||| ||  ||||| ||||||||||  ||||||||| ||||    
T  50751745 agggcatttttgtccattcccatgctattttgttaatttgatgatgtggcagtctttaagtgggttcagggacgaattttt 50751825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 468
Target Start/End: Complemental strand, 39538272 - 39538181
Alignment:
Q  377 gaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| || |||||||||||||| || |  |||| |||||| ||||||||||||||| ||||  ||||| | | | |||||||||||||||    
T  39538272 gaaggaagaagagggtatttttgttcaattacatgtcattttgctaatttgatgacgtgacagcgattaattagattaagggacgaaatttt 39538181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 468
Target Start/End: Original strand, 55867362 - 55867441
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||| ||||  ||| |||||| |||||||||||||||  |||| ||||| ||||   ||||||||||||||    
T  55867362 gggtatttttgtcaattccaatgtcattttgctaatttgatgacgtggcagtgattaactgggaatagggacgaaatttt 55867441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 11524186 - 11524232
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaattt 426  Q
    |||||| |||| ||||||||||||||| ||||||||||| |||||||    
T  11524186 ggatgacgaggatatttttgtccattcccatgccattttgctaattt 11524232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 3032760 - 3032683
Alignment:
Q  391 gtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||  |||||||||| |||||||||| || |  | || ||||||| ||||||  |||||||||||    
T  3032760 gtatttttgtccattcctatgccattttgctaatttgataacttggcggtgattaagttggtcaaatgacgaaatttt 3032683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 38814247 - 38814292
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| || |||||| |||||| |||||||||||||||    
T  38814247 gggtatttttgtcaatgctcatgtcattttgctaatttgatgacgt 38814292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 56557245 - 56557290
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| ||||  |||||||||| |||||||||||||||    
T  56557245 gggtatttttgtcaattcctatgccattttgctaatttgatgacgt 56557290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 371 - 468
Target Start/End: Original strand, 11741747 - 11741844
Alignment:
Q  371 aaagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| | ||||| ||||| |||||||| ||||||||||||    
T  11741747 aaagaagaaggatgatgagggtatttttgtccattccaatgccattttgctaatttgatgacctgacagtgattaactgggtcaaaggacgaaatttt 11741844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 17544285 - 17544373
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||| |||||| |||| |||||||    
T  17544285 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacaaaatttt 17544373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 20153155 - 20153243
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| |||| |||||| |||||||||||||||  |||| ||||||| |||||| ||| ||||||||    
T  20153155 ggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtagcagtgattaagttggtcaaaggatgaaatttt 20153243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 22869790 - 22869706
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| |||||  |||   ||||||||||||||    
T  22869790 gatgagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaaccgggaagagggacgaaatttt 22869706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 17544230 - 17544149
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||| ||||||  ||| |||||||    
T  17544230 gagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaatgacaaaatttt 17544149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 22870374 - 22870427
Alignment:
Q  381 gatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  22870374 gatgatgagggtatttttgtccattcccatgtcattttgctaatttgatgacgt 22870427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 432
Target Start/End: Complemental strand, 20153100 - 20153055
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  20153100 gagggtatttttgtccattcccatgccattttgctaatttgatgac 20153055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 33871521 - 33871440
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||  ||||||||||| ||| ||||||||| |  | || ||||||| |||||| ||||||||||||    
T  33871521 gagggtatttttgtccatttccatgccattttgctagtttgatgacttggcggtgattaagttggtcaaaggacgaaatttt 33871440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 468
Target Start/End: Original strand, 33871590 - 33871663
Alignment:
Q  395 ttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||| |||| |||||| |||||||||||||||  |||| ||||||| ||||||  |||||||||||    
T  33871590 ttttgtccattcccatgtcattttgctaatttgatgacgtagcagtgattaagttggtcaaatgacgaaatttt 33871663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 468
Target Start/End: Complemental strand, 8875618 - 8875550
Alignment:
Q  400 tccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||  ||||||||||||||||||||||||||  |||| ||||||| |||||| | ||||||||||    
T  8875618 tccattcctatgccattttactaatttgatgacgtggcagtgattaagttggtcaaagaacgaaatttt 8875550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 21257408 - 21257451
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatga 431  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  21257408 agggcatttttgtccattctcatgccattttgctaatttgatga 21257451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 432
Target Start/End: Original strand, 21287904 - 21287946
Alignment:
Q  390 ggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  21287904 ggtatttttgtccattcccatgccattttgctaatttgatgac 21287946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 20072301 - 20072256
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  20072301 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 20072256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 20072789 - 20072834
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  20072789 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 20072834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 22298724 - 22298643
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||| |||| |||| |||||| ||||||||||||| |   ||| ||||||| |||||| ||| ||||||||    
T  22298724 gagggtatttttgtcaattcccatgtcattttgctaatttgatgacttggtagtgattaagttggtcaaaggatgaaatttt 22298643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 36477296 - 36477341
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  36477296 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 36477341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 39181237 - 39181192
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  39181237 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 39181192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 39181716 - 39181761
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  39181716 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 39181761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 431
Target Start/End: Complemental strand, 36476945 - 36476903
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatga 431  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||    
T  36476945 gggtatttttgtcaattcccatgccattttgctaatttgatga 36476903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 16533545 - 16533590
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| ||||||| |||||||    
T  16533545 gggtatttttgtcaattcccatgccattttgctaatttaatgacgt 16533590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 20152962 - 20152882
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||| ||||| ||| ||||||  ||||||||||||| |   ||| ||||||| |||||| ||||||||||||    
T  20152962 gagggtatttttgttcattcccataccatttg-ctaatttgatgacttggtagtgattaagttggtcaaaggacgaaatttt 20152882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 12228570 - 12228486
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||| ||  |||||||||||    
T  12228570 gatgagggtatttttgtccattctcatgccattttgttaatttgatgacgtgacagtcattaagtgggttaaacgacgaaatttt 12228486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 384 - 468
Target Start/End: Original strand, 18087581 - 18087665
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||||||| ||||||| |||||||    
T  18087581 gatgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtcattaagtgggttaagggacaaaatttt 18087665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 25628667 - 25628579
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  25628667 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaatttt 25628579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 42618148 - 42618236
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| |||||| ||||||||||||    
T  42618148 ggatgacgaggatatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaatttt 42618236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 46205546 - 46205634
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| | ||| ||||||| |||||| ||||||||||||    
T  46205546 ggatgacgagggtatttttgtccattcccatgccattttcctaatttgatgacgtgatagtgattaagttggtcaaaggacgaaatttt 46205634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 4226322 - 4226260
Alignment:
Q  372 aagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  4226322 aagaagaaggatgatgagggtatttttgtccattcccatgccattttgctaatttgatgacgt 4226260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 5456012 - 5455928
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||  |||| |||||||||||  ||||| ||||||||    
T  5456012 gatgagggtatttttgtccattctcatgccattttgctaatttgatgatgtggcagtaattaagtgggtgtagggatgaaatttt 5455928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 10600186 - 10600274
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||| |||||| |||| |||||||    
T  10600186 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacatgacagtgattaagttggtcaaaggacaaaatttt 10600274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 468
Target Start/End: Complemental strand, 47558227 - 47558131
Alignment:
Q  372 aagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||| ||||| |||||  |||   ||||||||||||||    
T  47558227 aagaagaaggatgatgagggtatttttatccattcccatgacattttgctaatttgatgacgtgacagtgattaatcgggaagagggacgaaatttt 47558131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 468
Target Start/End: Original strand, 18855902 - 18855981
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||| ||| ||||| ||||| |||||||||||||||  |||||||||||||||| |||||||||||||||    
T  18855902 gggtatttttgtcctttcccatgctattttgctaatttgatgacgtgtcagtcattaagtgggttaagggacgaaatttt 18855981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 468
Target Start/End: Complemental strand, 28890767 - 28890680
Alignment:
Q  381 gatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||  |||||  |||||||||||    
T  28890767 gatgacgagggtatttttgtccattttcatgccattttgctaatttgatgacgtgacagtgattaagttagtcaaaagacgaaatttt 28890680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 468
Target Start/End: Original strand, 32688462 - 32688545
Alignment:
Q  385 atgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||| |||  ||||| ||||| |||||||||||||||  |||| |||||||||||||||||||||||||||    
T  32688462 atgagggtatttttgtctatttccatgcaattttgctaatttgatgacgtggcagttattaagtgggtcaagggacgaaatttt 32688545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 18086471 - 18086390
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||| |  |||| ||||| |||||||||||||||||||||    
T  18086471 gagggtatttttgtccatttccatgccattttgctaatttgatgacatggcagtaattaactgggtcaagggacgaaatttt 18086390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 25628722 - 25628803
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||| |||||| ||||||||||||    
T  25628722 gagggtagttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaatttt 25628803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 449
Target Start/End: Complemental strand, 47945553 - 47945468
Alignment:
Q  364 ttcaaagaaagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtg 449  Q
    ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||| ||  | |||||||||||    
T  47945553 ttcaaaggaagaagaaggatgatgagggtatttttgtccattcctatgccattttgttaatttgatgatgtggcggtcattaagtg 47945468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 449
Target Start/End: Complemental strand, 47950983 - 47950898
Alignment:
Q  364 ttcaaagaaagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtg 449  Q
    ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||| ||  | |||||||||||    
T  47950983 ttcaaaggaagaagaaggatgatgagggtatttttgtccattcctatgccattttgttaatttgatgatgtggcggtcattaagtg 47950898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 372 - 468
Target Start/End: Original strand, 12644036 - 12644132
Alignment:
Q  372 aagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||  |||| |||||  |||   ||||||||||||||    
T  12644036 aagatgaaggatgatgagggcatttttgttcattctcatgccattttgctaatttgatgacgtggcagtgattaaccgggaagagggacgaaatttt 12644132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 372 - 468
Target Start/End: Complemental strand, 13384699 - 13384603
Alignment:
Q  372 aagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||  |||||||||||| |   ||| |||||||| ||  ||||||||||||||    
T  13384699 aagaagaaggatgatgagggtatttttgtccattcccatgtcattttgttaatttgatgacatgggagtaattaagtgagtgtagggacgaaatttt 13384603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 22081748 - 22081660
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||||||||||||||  ||||||||||||| |  |||| ||||||| | |||| ||||||||||||    
T  22081748 ggatgacgagggtatttttgtccattctcatgccatttcgctaatttgatgacttggcagtgattaagttgatcaaaggacgaaatttt 22081660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 32934585 - 32934673
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| |||| |||||| ||||||||||| ||| ||||| ||||||| ||||||  |||||||||||    
T  32934585 ggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgtcgtgacagtgattaagttggtcaaatgacgaaatttt 32934673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 46204599 - 46204522
Alignment:
Q  391 gtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |  |||| ||||||| |||||| ||||||||||||    
T  46204599 gtatttttgttcattcccatgccattttactaatttgatgacttagcagtgattaagttggtcaatggacgaaatttt 46204522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 23058674 - 23058754
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||  |||| ||||||| ||||||  |||||||||||    
T  23058674 agggtatttttgtccattcccatgccattttgttaatttgatgacgtggcagtaattaagttggtcaaatgacgaaatttt 23058754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 32068333 - 32068421
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||| |||||||| |||| ||||||||||| |||||||||||||||  |||| ||||||| ||||||  |||||||||||    
T  32068333 ggatgacgagggtctttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaatttt 32068421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 45914713 - 45914625
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||||||||||||  |||| |||||  |||   ||||||||||||||    
T  45914713 ggatgatgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaatcgggaagagggacgaaatttt 45914625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 25453365 - 25453450
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaat 465  Q
    |||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||  | || ||||||  |||||| |||||||||    
T  25453365 ggatgacgaggatatttttgtccattcccatgccattttgctaatttgatgacgtggcggtgattaagctggtcaaaggacgaaat 25453450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 32934530 - 32934449
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||| |   ||| ||||||| |||||| ||||||||||||    
T  32934530 gagggtatttttgtccattcctatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaatttt 32934449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 33808505 - 33808424
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||   |||  ||||| |||||||| ||||||||||||    
T  33808505 gagggtatttttgtccattcccatcccattttgctaatttgatgacggggcagcgattaactgggtcaatggacgaaatttt 33808424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 42618093 - 42618012
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |   ||| ||||||| | |||| ||||||||||||    
T  42618093 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttgatcaaaggacgaaatttt 42618012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 468
Target Start/End: Original strand, 43266514 - 43266591
Alignment:
Q  391 gtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |   ||| ||||||| |||||| ||||||||||||    
T  43266514 gtatttttgtccattctcatgtcattttgctaatttgatgacttagtagtgattaagttggtcaaaggacgaaatttt 43266591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 25453313 - 25453229
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||| ||||||||||||||||| |||||| |||| ||||||||||||| |   ||| ||||||| |||||| ||||||||||||    
T  25453313 gatgacggtatttttgtccattcccatgcctttttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaatttt 25453229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 43266455 - 43266367
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||| ||||| ||| |||||||  |||||||||||||| ||||| ||||||| ||||||  || ||||||||    
T  43266455 ggatgacgagggtatttttgttcattcccataccattttgttaatttgatgacgtgacagtgattaagttggtcaaatgatgaaatttt 43266367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 468
Target Start/End: Complemental strand, 32687581 - 32687498
Alignment:
Q  385 atgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||| ||||||| |||||||| ||||| ||||| |||||||||||| ||  |||||||| | |||||||||| ||||||||||    
T  32687581 atgagtgtattttggtccattcccatgcaattttgctaatttgatgaagtggcagtcattgattgggtcaaggaacgaaatttt 32687498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 468
Target Start/End: Original strand, 43124400 - 43124479
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||  |||| ||||| ||||   ||||||||||||||    
T  43124400 gggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaactgggaatagggacgaaatttt 43124479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 32068278 - 32068197
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||| |  || | ||||||| |||||| | ||||||||||    
T  32068278 gagggtatttttgtcctttcccatgccattttgctaatttgatgacttggcattgattaagttggtcaaagtacgaaatttt 32068197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 33828219 - 33828299
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||| |||||||||||  || ||||||||  | ||||| ||||||| ||||||  |||||||||||    
T  33828219 agggtatttttgtccattcccatgccattttgttagtttgatgatttgacagtgattaagttggtcaaatgacgaaatttt 33828299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 39275045 - 39274971
Alignment:
Q  394 tttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtc-aagggacgaaatttt 468  Q
    ||||||||||||||||||||| ||| |||||||||||||||  |||| ||||||| |||| || ||||||||||||    
T  39275045 tttttgtccattctcatgcca-tttgctaatttgatgacgtggcagtgattaagttggtcaaaaggacgaaatttt 39274971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 431
Target Start/End: Original strand, 4227088 - 4227134
Alignment:
Q  385 atgagggtatttttgtccattctcatgccattttactaatttgatga 431  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  4227088 atgaaggtatttttgtccattctcatgccattttgctaattttatga 4227134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 22661537 - 22661492
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  22661537 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 22661492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 27480167 - 27480122
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  27480167 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 27480122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 27480667 - 27480712
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  27480667 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 27480712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 23058614 - 23058566
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    |||||| |||||||||||||||| |||| |||||| |||||||||||||    
T  23058614 gatgagtgtatttttgtccattcccatgacattttgctaatttgatgac 23058566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 468
Target Start/End: Complemental strand, 12643283 - 12643201
Alignment:
Q  386 tgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||||  ||||||||   |||||||||||||||  |||| |||||  |||   ||||||||||||||    
T  12643283 tgagggtatttttgtccattcctatgccattaagctaatttgatgacgtggcagtgattaatcgggaagagggacgaaatttt 12643201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 428 - 468
Target Start/End: Original strand, 12229359 - 12229399
Alignment:
Q  428 atgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||  |||||||||||||||| |||||||||||||||    
T  12229359 atgacgtggcagtcattaagtgggttaagggacgaaatttt 12229399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 5e-26; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 15913785 - 15913873
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| |||||| ||||||||||||    
T  15913785 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaatttt 15913873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 8089628 - 8089544
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||||||  | |||||||||||||| |||||||||||||||    
T  8089628 gatgagggtatttttgtccattcccatgccattttgttaatttgatgacgtgtcggtcattaagtgggttaagggacgaaatttt 8089544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 31407115 - 31407203
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| |||| |||||| ||||||||||||||| ||||| ||||||| |||||| ||||||||||||    
T  31407115 ggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaatttt 31407203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 12065409 - 12065321
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||| |||||| || |||||||||    
T  12065409 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacctgacagtgattaagttggtcaaaggtcgaaatttt 12065321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 467
Target Start/End: Original strand, 7905480 - 7905567
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaattt 467  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| ||||||  ||||||||||    
T  7905480 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaattt 7905567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 22502956 - 22502875
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |  |||| ||||||| |||||| ||||||||||||    
T  22502956 gagggtatttttgtccattctcataccattttgctaatttgatgacttggcagttattaagttggtcaaaggacgaaatttt 22502875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 7160993 - 7160905
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||| ||||| |||||||||||||||   ||| ||||||| |||||| ||||||||||||    
T  7160993 ggatgacgagggtatttttgtccattcccatgctattttgctaatttgatgacgtggtagtgattaagttggtcaaaggacgaaatttt 7160905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 21836219 - 21836132
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| |||||||  ||||| ||||||||||||    
T  21836219 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagt-tgtcaaaggacgaaatttt 21836132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 22503011 - 22503095
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaa 464  Q
    |||||| |||||||||||||||||||| |||| |||||| |||||||||||||||  |||| ||||||| ||||||  |||||||    
T  22503011 ggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaa 22503095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 7905425 - 7905344
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||| | || || ||||||| ||||||  |||||||||||    
T  7905425 gagggtatttttgtccattcccgtgccattttgctaatttgatgacttgacggtgattaagttggtcaaatgacgaaatttt 7905344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 21836274 - 21836355
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||| |  |||| ||||||| |||||| ||||||||||||    
T  21836274 gaggatatttttgtccattcccatgccattttgttaatttgatgacttggcagtgattaagttggtcaaaggacgaaatttt 21836355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 6517684 - 6517603
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| ||||||||| ||||| ||||||||||| ||||||||||||| |   ||| ||||||| |||||| ||||||||||||    
T  6517684 gaggctatttttgttcattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaatttt 6517603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 31407060 - 31406979
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||| |   ||| |||||||  ||||| ||||||||||||    
T  31407060 gagggtatttttgtccatttccatgccattttgctaatttgatgacttgggagtgattaagtttgtcaaaggacgaaatttt 31406979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 432
Target Start/End: Complemental strand, 14656660 - 14656617
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  14656660 gggtatttttgtcaattcccatgccattttactaatttgatgac 14656617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 468
Target Start/End: Original strand, 7161051 - 7161129
Alignment:
Q  390 ggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||| | |  || ||||||| ||||||  |||||||||||    
T  7161051 ggtatttttgtccattcccatgcaattttgctaatttgatgacttgatggtgattaagttggtcaaatgacgaaatttt 7161129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 20651191 - 20651145
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||||    
T  20651191 agggcatttttgtccattcccatgccattttgctaatttgatgacgt 20651145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 14657129 - 14657174
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  14657129 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 14657174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 33400146 - 33400101
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  33400146 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 33400101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 13379729 - 13379809
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||||||||| ||  ||||||| ||||||||||||| | ||||| ||||| ||||   ||||||||||||||    
T  13379729 agggcatttttgtccattcccaaaccattttgctaatttgatgacatgacagtaattaactgggctcagggacgaaatttt 13379809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 3176289 - 3176348
Alignment:
Q  375 aagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    |||||| | ||||| ||||||||||||||||||||| | |||||  ||||||||||||||    
T  3176289 aagaagaaggatgaaggtatttttgtccattctcatactattttggtaatttgatgacgt 3176348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 468
Target Start/End: Original strand, 20651899 - 20651974
Alignment:
Q  393 atttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| ||||||| |||| |||||| ||||||| |||||||  |||| ||||| |||||  ||||||||||||||    
T  20651899 atttttatccattcccatgtcattttgctaatttaatgacgtggcagtaattaactgggttcagggacgaaatttt 20651974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 4117467 - 4117509
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatga 431  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||    
T  4117467 gggtatttttgtcaattcccatgccattttgctaatttgatga 4117509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 432
Target Start/End: Original strand, 10781402 - 10781447
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    |||| ||||||||||||||| ||||||||||| | |||||||||||    
T  10781402 gaggatatttttgtccattcccatgccattttgcgaatttgatgac 10781447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 15913730 - 15913649
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||| |||  ||||||||||| ||||||||||||| |   ||| ||||||| | ||||  |||||||||||    
T  15913730 gagggtatttttgtcaatttccatgccattttgctaatttgatgacttggtagtgattaagttgttcaaatgacgaaatttt 15913649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 371 - 468
Target Start/End: Complemental strand, 6588881 - 6588784
Alignment:
Q  371 aaagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |  |||| || || |||||||| ||||||||||||    
T  6588881 aaagaagaaggatggtgagggtatttttgtccattcccatgccattttgctaatttgatgacctggcagtgatcaactgggtcaaaggacgaaatttt 6588784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 372 - 468
Target Start/End: Original strand, 202587 - 202683
Alignment:
Q  372 aagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||   ||| |||||||||||  ||||||||||||||    
T  202587 aagaagaaggatgatgaaggtatttttgtctattctcatgccattttgctaatttgataacgtgggagtaattaagtgggtgtagggacgaaatttt 202683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 15604576 - 15604664
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||   |||| ||||||| |||||| ||||||||||||    
T  15604576 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacggggcagtgattaagttggtcaaaggacgaaatttt 15604664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 468
Target Start/End: Original strand, 8710706 - 8710793
Alignment:
Q  381 gatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| || |||| |||||| ||||||||||||    
T  8710706 gatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgataaagttggtcaaaggacgaaatttt 8710793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 373 - 468
Target Start/End: Original strand, 25624337 - 25624432
Alignment:
Q  373 agaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||  |||| |||||  ||||  ||||||||||||||    
T  25624337 agaagaaggatgatgagggtatttttgtccattcccatgccattttgttaatttgatgatgtggcagtgattaaccgggtagagggacgaaatttt 25624432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 41587423 - 41587335
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||| ||||| ||||||| ||| || ||| ||||||||    
T  41587423 ggatgatgacggtatttttgtccattcccatgcaattttgctaatttgatgacgtgacagtgattaagttggttaaaggatgaaatttt 41587335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 11830553 - 11830465
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||| |||  |||||  |||||||||||    
T  11830553 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattgagtttgtcaaatgacgaaatttt 11830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 25623473 - 25623389
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||||||  |||| |||||  ||||  ||||||||||||||    
T  25623473 gatgagggtatttttgtccattcccatgccattttgttaatttgatgacgtggcagtgattaaccgggtagagggacgaaatttt 25623389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 389 - 468
Target Start/End: Complemental strand, 199188 - 199109
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||| |||||  ||||  ||||||||||| || ||||||||||||||||| ||||||| |||||||    
T  199188 gggtatttttgtccattcgcatgctcttttgttaatttgatgatgtgacagtcattaagtgggttaagggacaaaatttt 199109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 8342369 - 8342288
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||| |   ||| ||||||| |||||| ||||||||||||    
T  8342369 gagggtatttttgtcaattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaatttt 8342288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 468
Target Start/End: Original strand, 41588290 - 41588383
Alignment:
Q  375 aagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||| || ||||||||||||||| |||  ||||||||||| ||||||||||||| |  |||| ||||||| |||||| ||| ||||||||    
T  41588290 aagaaggaagacgagggtatttttgtcaatttccatgccattttgctaatttgatgacttggcagtgattaagttggtcaaaggatgaaatttt 41588383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 8710653 - 8710605
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  8710653 gatgagggtatttttgtccattcccatgccattttgctaatttgatgac 8710605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 15604524 - 15604440
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||| |   ||| ||||||| | |||| ||||||||||||    
T  15604524 gatgagggtatttttgtccattcccatgccattttgctaatttcatgacttggtagtgattaagttgatcaaaggacgaaatttt 15604440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 468
Target Start/End: Complemental strand, 25230299 - 25230203
Alignment:
Q  372 aagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||| | ||| |||||| ||  |||| ||||| ||||   ||||||||||||||    
T  25230299 aagaagaaggatagtgagggtatttttgtccattcgcatgccattttgccaatctgatgatgtggcagtaattaactgggctcagggacgaaatttt 25230203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 468
Target Start/End: Original strand, 39936495 - 39936574
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||| ||  ||||||||||| |||||||||||||||  || | ||||| | |||||| ||||||||||||    
T  39936495 gggtatttttgtccttttccatgccattttgctaatttgatgacgtggcattgattaaattggtcaaaggacgaaatttt 39936574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 20983181 - 20983226
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  20983181 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 20983226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 21103261 - 21103216
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  21103261 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 21103216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 29957997 - 29957952
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  29957997 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 29957952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 29958467 - 29958512
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  29958467 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 29958512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 20982704 - 20982659
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||| ||||||| |||||||||||||||    
T  20982704 gggtatttttgtcaattcccataccattttgctaatttgatgacgt 20982659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 32132498 - 32132405
Alignment:
Q  375 aagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||  |||| |||||||||||  ||||||||||||||    
T  32132498 aagaaggatgatgaggttatttttgtccattcccatgacattttgctaatttgatgacgtggcagtaattaagtgggtgtagggacgaaatttt 32132405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 8898706 - 8898618
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||| | |||||| ||||||||||||    
T  8898706 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaaattggtcaaaggacgaaatttt 8898618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 37929595 - 37929519
Alignment:
Q  392 tatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| |||||| ||||||||||||    
T  37929595 tatttttgtccattctcatgccattttgctaatttgatgacgttacagtgattaagttggtcaaaggacgaaatttt 37929519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 7371472 - 7371391
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  7371472 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaatttt 7371391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 35038644 - 35038556
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||| ||| ||| |||||| ||||||||||||    
T  35038644 ggatgatgaggatatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattgagttggtcaaaggacgaaatttt 35038556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 40714633 - 40714545
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| ||||||  |||||||||||    
T  40714633 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaatttt 40714545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 12905903 - 12905984
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| | ||||| ||||||| ||||||  |||||||||||    
T  12905903 gagggtatttttgtccattctcatgccattttgttaatttgatgacttgacagtgattaagttggtcaaatgacgaaatttt 12905984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 28324993 - 28324905
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||  ||||||||||| |||||||||||||||  |||| ||||||| ||||||  |||||||||||    
T  28324993 ggatgacgagggtatttttgtccatttccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaatttt 28324905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 31058294 - 31058382
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| ||||||   ||||||||||    
T  31058294 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaatacgaaatttt 31058382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 364 - 468
Target Start/End: Original strand, 35040835 - 35040939
Alignment:
Q  364 ttcaaagaaagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaa 463  Q
    ||||||| || |||||| | || |||||||||||||||||||| ||||||||||| ||||||||||||| |   ||| ||||||| |||||| |||||||    
T  35040835 ttcaaaggaaaaagaagaaagacgagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaa 35040934  T
Q  464 atttt 468  Q
    |||||    
T  35040935 atttt 35040939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 49955536 - 49955448
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||  |||| ||||||| |||||| |||| |||||||    
T  49955536 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaaggacaaaatttt 49955448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 381 - 468
Target Start/End: Original strand, 5734951 - 5735038
Alignment:
Q  381 gatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||| ||||||||| ||||||||||||||||  |||||||||||||| ||||| ||||| ||||   ||||||||||||||    
T  5734951 gatgatgagggcatttttgtctattctcatgccattttgttaatttgatgacgtgacagtaattaactgggctcagggacgaaatttt 5735038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 45750024 - 45749943
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |   ||| |||||||  ||||| ||||||||||||    
T  45750024 gagggtatttttgtccattctcatgccattttgctaatttgatgacttggtagtgattaagtttgtcaaaggacgaaatttt 45749943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 49955591 - 49955672
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |  | || ||||||| |||||| ||||||||||||    
T  49955591 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggcggtgattaagttggtcaaaggacgaaatttt 49955672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 46899847 - 46899927
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||| ||||   ||||||||||||||    
T  46899847 agggcatttttgttcattcccatgccattttactaatttgatgacgtgacagtaattaactgggctcagggacgaaatttt 46899927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 468
Target Start/End: Complemental strand, 5734192 - 5734110
Alignment:
Q  386 tgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||| ||||| |||||  ||||  |||||| |||||||    
T  5734192 tgagggtatttttgtccattcccatgccattttgttaatttgatgacgtgacagtaattaaacgggtgcagggacaaaatttt 5734110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 40714688 - 40714768
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |   ||| ||||||| |||||| ||||||||||||    
T  40714688 gagggtatttttgtccattc-catgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaatttt 40714768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 392 - 468
Target Start/End: Original strand, 45750091 - 45750167
Alignment:
Q  392 tatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| ||||||  || ||||||||    
T  45750091 tatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgatgaaatttt 45750167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 50062868 - 50062924
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcatta 445  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||| ||||| ||||    
T  50062868 gggtatttttgtcaattctcatgccattttgctaatttgatgacgtgacagtgatta 50062924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 17189136 - 17189055
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |   ||| ||||||  ||||||  |||||||||||    
T  17189136 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagctggtcaaatgacgaaatttt 17189055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 468
Target Start/End: Complemental strand, 31051118 - 31051051
Alignment:
Q  401 ccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| ||||||||||||||||||||||||| |   ||| ||||||| |||||| ||||||||||||    
T  31051118 ccattcccatgccattttactaatttgatgacttggtagtgattaagttggtcaaaggacgaaatttt 31051051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 468
Target Start/End: Original strand, 20760752 - 20760830
Alignment:
Q  390 ggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||| |||| |||||| ||||||||||||  |   ||| ||||||| |||||| ||||||||||||    
T  20760752 ggtatttttgtccattcccatgtcattttgctaatttgatgatttggtagtgattaagttggtcaaaggacgaaatttt 20760830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 48870564 - 48870618
Alignment:
Q  279 agaggttgtgtagtgagtgatggttggggtttgaagaataagaaggagaagagga 333  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| ||| |||||    
T  48870564 agaggttgtgtagttagtgatagttggggtttgaagaatgagaagaagacgagga 48870618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 8898761 - 8898842
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| | || |||||| ||||||||||||| |   ||| ||||||| ||||||  |||||||||||    
T  8898761 gagggtatttttgtccattcccgtgtcattttgctaatttgatgacttggtagtgattaagttggtcaaatgacgaaatttt 8898842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 28325048 - 28325129
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||||||||||  ||| |||||| ||||||||||||| | | ||| ||||||| ||||||  |||||||||||    
T  28325048 gaggatatttttgtccattcctatgtcattttgctaatttgatgacttgatagtgattaagttggtcaaaagacgaaatttt 28325129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 46282251 - 46282206
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  46282251 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 46282206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 49093221 - 49093176
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  49093221 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 49093176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 49093733 - 49093778
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  49093733 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 49093778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 35616579 - 35616630
Alignment:
Q  279 agaggttgtgtagtgagtgatggttggggtttgaagaataagaaggagaaga 330  Q
    |||||||||||||| |||||| ||||||||||||||||  ||||||| ||||    
T  35616579 agaggttgtgtagttagtgatagttggggtttgaagaaggagaaggaaaaga 35616630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 13295320 - 13295270
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    |||||||||||||||||| |||  |||| |||||| |||||||||||||||    
T  13295320 gatgagggtatttttgtctatttccatgtcattttgctaatttgatgacgt 13295270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 46282713 - 46282755
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatga 431  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||    
T  46282713 gggtatttttgtcaattcccatgccattttgctaatttgatga 46282755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 32240279 - 32240328
Alignment:
Q  9 aattcaaaatccaccaacatttgattccaagagttgcttcatcatccaat 58  Q
    ||||| ||| ||||||||||||| |||||||| | |||||||||||||||    
T  32240279 aattccaaacccaccaacatttgtttccaagactagcttcatcatccaat 32240328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 50062383 - 50062338
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| |||| |||||| |||||||||||||||    
T  50062383 gggtatttttgtcaattcccatgtcattttgctaatttgatgacgt 50062338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 432
Target Start/End: Complemental strand, 30326673 - 30326633
Alignment:
Q  392 tatttttgtccattctcatgccattttactaatttgatgac 432  Q
    ||||||||||||||| |||| |||||| |||||||||||||    
T  30326673 tatttttgtccattcccatgtcattttgctaatttgatgac 30326633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 46899242 - 46899162
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||||||||| |||||||||||  | ||||||||| ||  |||| ||||| ||||   ||||||||||||||    
T  46899242 agggcatttttgtccattcccatgccattttgtttatttgatgatgtggcagtaattaactgggctcagggacgaaatttt 46899162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 1105 - 1021
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||| |||||| ||||||||||||    
T  1105 gatgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaatttt 1021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 468
Target Start/End: Original strand, 9368544 - 9368628
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||  || ||||||||||||| |||| ||||||||||    
T  9368544 gatgagggtatttttgtccattctcatgccattttgttaatttgatgacgtggcaatcattaagtgggttaaggaacgaaatttt 9368628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 13948965 - 13948881
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||| |||||| ||||||||||||    
T  13948965 gatgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaatttt 13948881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 40788657 - 40788745
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  40788657 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaatttt 40788745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 29118720 - 29118639
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||| |||||| ||||||||||||    
T  29118720 gagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaatttt 29118639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 3469389 - 3469301
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  | || ||||||| |||||| ||||||||||||    
T  3469389 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggccgtgattaagttggtcaaaggacgaaatttt 3469301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 35759027 - 35759091
Alignment:
Q  367 aaagaaagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatga 431  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35759027 aaaggaagaagaaggaagatgagggtatttttgtccattctcatgccattttgctaatttgatga 35759091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 35644033 - 35643952
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| |||||||  ||||| ||||||||||||    
T  35644033 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagtttgtcaaaggacgaaatttt 35643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 41422154 - 41422073
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||| ||||| ||||||| ||||||  |||||||||||    
T  41422154 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaatgacgaaatttt 41422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 29118775 - 29118863
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| ||||||||||||||| |||| ||||||||||| ||||| |||||||||  |||| ||||||| |||||| ||||||||||||    
T  29118775 ggatgacgagggtatttttgtctattcccatgccattttgctaatgtgatgacgtggcagtgattaagttggtcaaaggacgaaatttt 29118863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 37778518 - 37778598
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||  |||| ||||||| |||||| ||| ||||||||    
T  37778518 agggtatttttgtctattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggatgaaatttt 37778598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 468
Target Start/End: Complemental strand, 52032325 - 52032239
Alignment:
Q  382 atgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||||||||||||||| |||||||||||  ||||||||||||||   ||| ||||||| |||||| ||||||||||||    
T  52032325 atgacgagggtatttttgtccattcccatgccattttgttaatttgatgacgtggtagtgattaagttggtcaaaggacgaaatttt 52032239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 382 - 455
Target Start/End: Original strand, 3596348 - 3596421
Alignment:
Q  382 atgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaa 455  Q
    |||| |||||||||||||||||||| |||| |||||| ||||||||||||||| ||||| ||||||| ||||||    
T  3596348 atgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaa 3596421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 376 - 468
Target Start/End: Complemental strand, 6956442 - 6956349
Alignment:
Q  376 agaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcatt-aagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||||||| |||| ||||||  |||||| |||||||  |||| ||| ||||||||  ||||||||||||||    
T  6956442 agaaggatgatgagggtatttttgtccattcccatgtcattttgttaattttatgacgtggcagtaattaaagtgggtgtagggacgaaatttt 6956349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 41989502 - 41989575
Alignment:
Q  355 tatgcattattcaaagaaagaagaaggatgatgagggtatttttgtccattctcatgccattttactaatttga 428  Q
    ||||| || ||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||| |||||||||    
T  41989502 tatgcgttgttcaaaggaagaagaaggaagatgaaggtgtttttgtccattctcatgccattttgctaatttga 41989575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 376 - 468
Target Start/End: Complemental strand, 1078729 - 1078637
Alignment:
Q  376 agaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||| |||||||||||||||| | |||||| || ||||||||||||| | ||| | ||||| |||||  ||||||||||||||    
T  1078729 agaaggatgatgagagtatttttgtccattcccgtgccatcttgctaatttgatgacatgacaataattaaatgggtgtagggacgaaatttt 1078637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 29686130 - 29686042
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||| ||||||| ||||||||||| |||||||||||||||  |||| || |||| |||||| | ||||||||||    
T  29686130 ggatgacgagggtatttttctccattcccatgccattttgctaatttgatgacgtggcagtgatcaagttggtcaaagaacgaaatttt 29686042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 3596288 - 3596210
Alignment:
Q  390 ggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |   ||| ||||||| |||||| | ||||||||||    
T  3596288 ggtatttttgtccattctcatgccattttgctaatttgatgacatggtagtgattaagttggtcaaagaacgaaatttt 3596210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 3469444 - 3469525
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |   ||| ||||||| |||||| ||||| ||||||    
T  3469444 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacggaatttt 3469525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 10307619 - 10307700
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||| ||||| ||||||| |||||||   ||| ||||||| |||||| ||||||||||||    
T  10307619 gagggtatttttgtccattcccatgcaattttgctaattttatgacgtgcgagtgattaagttggtcaaaggacgaaatttt 10307700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 446
Target Start/End: Original strand, 29192905 - 29192970
Alignment:
Q  381 gatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaa 446  Q
    ||||||||||||||||||||| |||| |||| |||||| ||||||||||||||| ||||| |||||    
T  29192905 gatgatgagggtatttttgtcaattcccatgtcattttgctaatttgatgacgtgacagtgattaa 29192970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 11910876 - 11910800
Alignment:
Q  392 tatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||   ||| ||||||| |||||| ||||||||||||    
T  11910876 tatttttgtccattcccatgccattttgctaatttgataacgtggtagtgattaagttggtcaaaggacgaaatttt 11910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 32306613 - 32306525
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||| ||||||||||||||| || | |||||| |||||||||||||||   ||| ||||||| |||||| ||||||||||||    
T  32306613 ggatgacgaggatatttttgtccattcccaagtcattttgctaatttgatgacgtggtagtgattaagttggtcaaaggacgaaatttt 32306525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 32716432 - 32716384
Alignment:
Q  386 tgagggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  32716432 tgagggtatttttgtccattcccatgccattttgctaatttgatgacgt 32716384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 47551682 - 47551594
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| ||||||| |||||||||||  ||||||||||| |||||||||||| ||  |||| ||||||| |||||| ||| ||||||||    
T  47551682 ggatgacgagggtaattttgtccatttccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaaggatgaaatttt 47551594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 40788605 - 40788558
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatga 431  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  40788605 gatgagggtatttttgtccattcccatgccattttgctaatttgatga 40788558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 1757224 - 1757269
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||    
T  1757224 gggtatttttgtcaattctcatgccattttgctaatttgatgacgt 1757269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 29192220 - 29192136
Alignment:
Q  384 gatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||| ||||||||| |||||| ||||||| |||||||  |||| |||||  |||   ||||||||||||||    
T  29192220 gatgagggtatttttgtcaattctcatgtcattttgctaatttaatgacgtggcagtgattaatcgggaagagggacgaaatttt 29192136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 32306669 - 32306749
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||  |||||||||| ||||||||||||| |   ||| ||||||| ||||||  |||||||||||    
T  32306669 agggtatttttgtccattcctatgccattttgctaatttgatgacttggtagtgattaagttggtcaaatgacgaaatttt 32306749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 468
Target Start/End: Original strand, 43608717 - 43608809
Alignment:
Q  376 agaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||| ||||||||||||||||||||||||  |||||||| || ||||||||||||  |  |||| ||||| | |||  ||||||||||||||    
T  43608717 agaagaatgatgagggtatttttgtccatttccatgccatcttgctaatttgatgatatagcagtaattaaataggtgtagggacgaaatttt 43608809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 468
Target Start/End: Original strand, 32717025 - 32717104
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||  ||| |||||| |||||||||||||||  |||| ||||| ||||   ||||||||||||||    
T  32717025 gggtatttttgtccattcctatgtcattttgctaatttgatgacgtggcagtaattaattgggaagagggacgaaatttt 32717104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 43998384 - 43998434
Alignment:
Q  382 atgatgagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    |||| |||| |||||||||||||||||||| |||||| |||||||||||||    
T  43998384 atgacgaggatatttttgtccattctcatggcattttgctaatttgatgac 43998434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 1756730 - 1756685
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  1756730 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 1756685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 2944093 - 2944048
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  2944093 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 2944048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 2944586 - 2944631
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  2944586 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 2944631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 10294749 - 10294696
Alignment:
Q  381 gatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    |||||||||||||||||||| ||||  |||| |||||| |||||||||||||||    
T  10294749 gatgatgagggtatttttgtacatttccatgtcattttgctaatttgatgacgt 10294696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 11026552 - 11026597
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  11026552 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 11026597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 37249718 - 37249763
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  37249718 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 37249763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 45278724 - 45278679
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  45278724 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 45278679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 45279204 - 45279249
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||    
T  45279204 gggtatttttgtccattcccatgtcattttgctaatttgatgacgt 45279249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 48189019 - 48189064
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  48189019 gggtatttttgtcaattcccatgccattttgctaatttgatgacgt 48189064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 432
Target Start/End: Original strand, 52032383 - 52032428
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||    
T  52032383 gagggtatttttgtccattcccatgtcattttgctaatttgatgac 52032428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 4322772 - 4322692
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||||||||| ||||| |||||  ||||||||||| ||  ||||| ||||||||||  ||||||||| ||||    
T  4322772 agggcatttttgtccattcccatgctattttgttaatttgatgatgtggcagtctttaagtgggttcagggacgaattttt 4322692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 432
Target Start/End: Complemental strand, 43105414 - 43105370
Alignment:
Q  388 agggtatttttgtccattctcatgccattttactaatttgatgac 432  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||    
T  43105414 agggtatttttgtcaattcccatgccattttgctaatttgatgac 43105370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 17227753 - 17227804
Alignment:
Q  279 agaggttgtgtagtgagtgatggttggggtttgaagaataagaaggagaaga 330  Q
    |||||||||||||| |||||| ||||||||||||||||  ||||||| ||||    
T  17227753 agaggttgtgtagttagtgatagttggggtttgaagaaggagaaggaaaaga 17227804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 44960364 - 44960293
Alignment:
Q  381 gatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggt 452  Q
    ||||||||||||||||||||||||||   |  ||||||  ||||||||||| || || ||||||||||||||    
T  44960364 gatgatgagggtatttttgtccattcatgtatcattttgttaatttgatgaggtgacggtcattaagtgggt 44960293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 10294804 - 10294884
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||| |||  |||||||||||| |  |||| ||||||| ||||||   ||||||||||    
T  10294804 gagggtatttttgtccattcccatgcca-tttggtaatttgatgacttggcagtgattaagttggtcaaaaaacgaaatttt 10294884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 37249379 - 37249334
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||  ||||||||||| |||||||||||||||    
T  37249379 gggtatttttgtcaatttccatgccattttgctaatttgatgacgt 37249334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 43105754 - 43105799
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| ||||  |||||||||| |||||||||||||||    
T  43105754 gggtatttttgtcaattccaatgccattttgctaatttgatgacgt 43105799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 43998327 - 43998246
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||| |||||||| |||||| ||||||||||| | ||||||||||| |   ||| ||||||| ||||||  |||||||||||    
T  43998327 gaggatatttttgaccattcccatgccattttgcgaatttgatgacttggtagtgattaagttggtcaaatgacgaaatttt 43998246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 48188558 - 48188513
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgt 434  Q
    ||||||||||||| |||| |||| |||||| |||||||||||||||    
T  48188558 gggtatttttgtcaattcccatggcattttgctaatttgatgacgt 48188513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 11377 - 11465
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||| ||||||  |||||||||||    
T  11377 ggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaatttt 11465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 468
Target Start/End: Complemental strand, 11322 - 11241
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |  |||| ||||||| |||||| ||||||||||||    
T  11322 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggcagtgattaagttggtcaaaggacgaaatttt 11241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 392 - 468
Target Start/End: Original strand, 12029 - 12105
Alignment:
Q  392 tatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  12029 tatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaatttt 12105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 221978 - 221891
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||  |||| |||||||  ||||| ||||||||||||    
T  221978 ggatgatgagggtatttttgttcattcccatgccattttgctaatttgatgacgtggcagtgattaagt-tgtcaaaggacgaaatttt 221891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 222033 - 222114
Alignment:
Q  387 gagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||||||||| |||||||||||  |||||||||||| |  |||| ||||||| |||||| ||||||||||||    
T  222033 gagggtatttttgtccattcccatgccattttgttaatttgatgacttggcagtgattaagttggtcaaaggacgaaatttt 222114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 377 - 468
Target Start/End: Complemental strand, 20049 - 19958
Alignment:
Q  377 gaaggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| || ||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| | ||| || | ||||||||||    
T  20049 gaaggaagaagagagtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtcattaattaggttaatgaacgaaatttt 19958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 468
Target Start/End: Original strand, 6227 - 6305
Alignment:
Q  390 ggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||| |||  |||||| ||| |||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  6227 ggtatttttgtcctttcctatgccactttgctaatttgatgacgtggcagtcattaagtgggttaaggaacgaaatttt 6305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 468
Target Start/End: Complemental strand, 5142 - 5063
Alignment:
Q  389 gggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||||||||||| ||  |||| |||||| |||||||||||||||  |||  ||||| | |||||| ||||||||||||    
T  5142 gggtatttttgtccttttccatgtcattttgctaatttgatgacgtggcagcgattaattaggtcaaaggacgaaatttt 5063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 6147 - 6098
Alignment:
Q  9 aattcaaaatccaccaacatttgattccaagagttgcttcatcatccaat 58  Q
    ||||| ||||||||||||||||| |||||||| | ||||| |||||||||    
T  6147 aattccaaatccaccaacatttgtttccaagactagcttcttcatccaat 6098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 2570 - 2494
Alignment:
Q  392 tatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||   ||| ||||||| |||||| ||||||||||||    
T  2570 tatttttgtccattcccatgccattttgctaatttgataacgtggtagtgattaagttggtcaaaggacgaaatttt 2494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Original strand, 12476 - 12564
Alignment:
Q  380 ggatgatgagggtatttttgtccattctcatgccattttactaatttgatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    |||||| || |||||||||||| |||| |||| |||||| |||||||||||||||  |||| ||||||| |||||| | ||||||||||    
T  12476 ggatgacgatggtatttttgtctattcccatgtcattttgctaatttgatgacgtggcagtgattaagtaggtcaaagaacgaaatttt 12564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 468
Target Start/End: Complemental strand, 238397 - 238356
Alignment:
Q  427 gatgacgtcacagtcattaagtgggtcaagggacgaaatttt 468  Q
    ||||||||  |||||||||||||||| |||||||||||||||    
T  238397 gatgacgtggcagtcattaagtgggttaagggacgaaatttt 238356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University