View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5118-Insertion-8 (Length: 280)

Name: NF5118-Insertion-8
Description: NF5118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5118-Insertion-8
NF5118-Insertion-8
[»] chr7 (1 HSPs)
chr7 (5-280)||(44349482-44349749)


Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 5 - 280
Target Start/End: Complemental strand, 44349749 - 44349482
Alignment:
Q  5 acagaatgtggagtgcggctagcatgtgccaaatatgctgtgtatggtgtagattatgaaggacatggacaatctgaaggtgttcgttgttacattaaga 104  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44349749 acagaatgtggagtacggctagcatgtgccaaatatgctgtgtatggtgtagattatgaaggacatggacaatctgaaggtgttcgttgttacattaaga 44349650  T
Q  105 agttcaataacattgttaatgactgttatgactttttcaagtcagttagtggtatggattcaaagcctttgtctaatcctttgagtgtatacatttttaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  44349649 agttcaataacattgttaatgactgttatgactttttcaagtcagttagtggtatggattcaaagcctttgtctaatcttttgagtgtataca-ttttaa 44349551  T
Q  205 tcaattctattattttcatcattcattttcatgttaattaattccagtgcttcaagagtacaagggaaaagctagg 280  Q
    |||||||   |||||||||||||||||||||||    ||||||||||||||||||||||||| |||||||||||||    
T  44349550 tcaattc---tattttcatcattcattttcatg----ttaattccagtgcttcaagagtacatgggaaaagctagg 44349482  T

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