View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5118_high_10 (Length: 251)
Name: NF5118_high_10
Description: NF5118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5118_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 6512695 - 6512456
Alignment:
| Q |
1 |
taaggagaagaatacctactggaattgaggggtttagtacgaacatgaatgagaatgcaattagagttcttctttagaaggtggtccaccgcccatttca |
100 |
Q |
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| T |
6512695 |
taaggagaagaatacctactggaattgagaggtttggtacgaacatgaatgagaatgcaattggagttcttctttagaaggtggtccaccgcccatttca |
6512596 |
T |
|
| Q |
101 |
ccgcgcactggctattccgaccggtgttgatggcaatgacggtggttttggcggcggtggcagctcctaattcattagtaatcatttgcatgaagaatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6512595 |
ccgcgcactggctattccgaccggtgttgatggcaatgacggtggttttggcggcggtggcagctcctaattcattagtaatcatttgcatgaagaatta |
6512496 |
T |
|
| Q |
201 |
aggttagttacttttttagaaaaaataagctcttgtctctg |
241 |
Q |
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|||||||||||||||||||| |||||||||||||||||||| |
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| T |
6512495 |
aggttagttacttttttaga-aaaataagctcttgtctctg |
6512456 |
T |
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