View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5118_high_9 (Length: 255)
Name: NF5118_high_9
Description: NF5118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5118_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 51991538 - 51991312
Alignment:
| Q |
13 |
aatatacacattaagatcccaaaggaggttttgttgagaaaacctaaaagtacaagagctgcaccatgttgtaaaattacaatctaatttatgttttggc |
112 |
Q |
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| T |
51991538 |
aatatacacattaagatcccaaaggaggttttgttgagaaaacctaaaagtacaagagctgcaacatgttgtacaattacaatctaatttatgttttggc |
51991439 |
T |
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| Q |
113 |
agtacgagccaattgtgtaattgaacaattatctcttgtttaattttcctcttgtaacagataaacaatttccttttaaattgtactatttccaagttga |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51991438 |
agtacgagccaattgtgtaattgaacaattatctcttgtttaattttcctcttgtaacagataaacaatttccttttaaattgtactatttccaagttga |
51991339 |
T |
|
| Q |
213 |
atgaacttgaataaaatactattcatt |
239 |
Q |
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||||||||||||||||||||||||||| |
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| T |
51991338 |
atgaacttgaataaaatactattcatt |
51991312 |
T |
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