View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5118_low_1 (Length: 494)

Name: NF5118_low_1
Description: NF5118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5118_low_1
NF5118_low_1
[»] chr2 (9 HSPs)
chr2 (5-478)||(27724494-27724967)
chr2 (1-388)||(27735732-27736119)
chr2 (138-304)||(27717303-27717470)
chr2 (143-192)||(7435557-7435606)
chr2 (262-302)||(34324900-34324940)
chr2 (143-192)||(7524386-7524435)
chr2 (136-192)||(16920702-16920758)
chr2 (112-198)||(27595668-27595754)
chr2 (260-304)||(7429458-7429502)
[»] chr8 (5 HSPs)
chr8 (1-310)||(14682148-14682451)
chr8 (255-302)||(3368283-3368330)
chr8 (262-302)||(4027476-4027516)
chr8 (255-302)||(27183523-27183570)
chr8 (265-302)||(31135480-31135517)
[»] chr1 (4 HSPs)
chr1 (138-195)||(19225744-19225801)
chr1 (138-210)||(19221209-19221281)
chr1 (263-300)||(344684-344721)
chr1 (151-192)||(344828-344869)
[»] chr6 (7 HSPs)
chr6 (248-306)||(23216413-23216471)
chr6 (255-304)||(29130872-29130921)
chr6 (137-192)||(32745195-32745250)
chr6 (135-192)||(32961060-32961117)
chr6 (255-307)||(29012453-29012505)
chr6 (254-302)||(29152571-29152619)
chr6 (250-302)||(29299627-29299679)
[»] chr3 (1 HSPs)
chr3 (248-302)||(2703336-2703390)
[»] chr5 (8 HSPs)
chr5 (262-302)||(30651131-30651171)
chr5 (262-302)||(31777477-31777517)
chr5 (134-193)||(37512600-37512659)
chr5 (136-193)||(32642642-32642699)
chr5 (137-186)||(42782935-42782984)
chr5 (248-301)||(28994611-28994664)
chr5 (137-186)||(41227659-41227708)
chr5 (137-193)||(42565277-42565333)
[»] scaffold0129 (2 HSPs)
scaffold0129 (255-302)||(17603-17650)
scaffold0129 (255-302)||(33999-34046)
[»] chr4 (2 HSPs)
chr4 (151-193)||(4877550-4877592)
chr4 (127-192)||(48742276-48742341)
[»] chr7 (3 HSPs)
chr7 (262-302)||(25627762-25627802)
chr7 (255-302)||(42445889-42445936)
chr7 (137-192)||(42446026-42446081)
[»] scaffold0831 (1 HSPs)
scaffold0831 (277-305)||(1777-1805)
[»] scaffold0054 (1 HSPs)
scaffold0054 (136-192)||(33777-33833)


Alignment Details
Target: chr2 (Bit Score: 458; Significance: 0; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 5 - 478
Target Start/End: Original strand, 27724494 - 27724967
Alignment:
Q  5 gtaacgggcacctcagtggccaggttaaaagacaccacaaatgtttcacttggttgacgatatgtttttccccaccaatgacaaaccccatttaagtaca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27724494 gtaacgggcacctcagtggccaggttaaaagacaccacaaatgtttcacttggttgacgatatgtttttccccaccaatggcaaaccccatttaagtaca 27724593  T
Q  105 ccatagaaccttccgaagtcaaataacgttgtggcatatcaacataaagtttcttccaagagttacttcttagactatatatatcccaatagggaccggg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27724594 ccatagaaccttccgaagtcaaataacgttgtggcatatcaacataaagttttttccaagagttacttcttagactatatatatcccaatagggaccggg 27724693  T
Q  205 cggtgcaacttgccactcatcttcacaacctccaatataaacaacatattgaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaata 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27724694 cggtgcaacttgccactcatcttcacaacctccaatataaacaacatattgaatgaccttgtagtcatctcgaacatggtcataaccaaatccatgaata 27724793  T
Q  305 ttaaaaataggttcaaattcatagtacatcctagccttattttgatgaacactatttaattccccggtagctggattccataactcaataattgaatcat 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27724794 ttaaaaataggttcaaattcatagtacatcctagccttattttgaggaacactatttaattccccggtagctggattccataactcaataattgaatcat 27724893  T
Q  405 gctctcgatcgtagatacaaagagtgtcattaataccagaacctaaaatattcggataatagccatagtttctg 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27724894 gctctcgatcgtagatacaaagagtgtcattaataccagaacctaaaatattcggataatagccatagtttctg 27724967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 388
Target Start/End: Original strand, 27735732 - 27736119
Alignment:
Q  1 agtggtaacgggcacctcagtggccaggttaaaagacaccacaaatgtttcacttggttgac------gatatgtttttccccaccaatgacaaacccca 94  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||   |      ||||||| |||||||||||||| |||||||||    
T  27735732 agtggtaacaggcacctcattggccaggttaaaagacaccacaaatgtttcacttggtattcccattagatatgtgtttccccaccaatggcaaacccca 27735831  T
Q  95 tttaagtacaccatagaaccttccgaagtcaaataacgttgtggcatatcaacataaagtttcttccaagagttacttcttagactatatatatcccaat 194  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||   |||||||||||| |||||||    
T  27735832 tttaaatacaccatagaaccttccgaagtcaaataacgttgccgcatatcaacataaagtttcttccaacggttactctgtagactatatatttcccaat 27735931  T
Q  195 agggaccgggcggtgcaacttgccactcatcttcacaacctccaatataaacaacatattgaatgaccttatagtcatctcgaacatggtcataaccaaa 294  Q
    |||| ||||| |||||||     |||| ||    |  | ||||||||||||||||||| |||| ||| ||||| ||||||| |||||| |||||||||||    
T  27735932 aggggccgggtggtgcaa-----cact-ataacaatcatctccaatataaacaacatactgaaggactttataatcatctctaacatgatcataaccaaa 27736025  T
Q  295 tccatgaatattaaaaataggttcaaattcatagtacatcctagccttattttgatgaacactatttaattccccggtagctggattccataac 388  Q
    ||||||||||||||||  || ||| ||| ||||  |||  | ||||||||||||| ||| | | |||| |||||| ||||| ||||||||||||    
T  27736026 tccatgaatattaaaatgagtttctaatccataagacaagcgagccttattttgaggaataatttttacttccccagtagccggattccataac 27736119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 304
Target Start/End: Original strand, 27717303 - 27717470
Alignment:
Q  138 gcatatcaacataaagtttcttccaagagttacttctt-agactatatatatcccaatagggaccgggcggtgcaacttgccactcatcttcacaacctc 236  Q
    |||||||||||||||||||||||||||| ||  || || ||||||||||||| ||||||||| || |||| |||  |||| || | ||||  | ||| ||    
T  27717303 gcatatcaacataaagtttcttccaagaattttttttttagactatatatataccaataggggccaggcgatgcttcttgacaataatctataaaacatc 27717402  T
Q  237 caatataaacaacatattgaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaata 304  Q
    |  ||||| | |||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||    
T  27717403 cggtataatctacatattgaatgattttatagtcatctctaacatggtcatagccaaatccatgaata 27717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 7435557 - 7435606
Alignment:
Q  143 tcaacataaagtttcttccaagagttacttcttagactatatatatccca 192  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  7435557 tcaacatcaagtttcttccaagagttgcttcttagactatatatctccca 7435606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 34324940 - 34324900
Alignment:
Q  262 cttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  34324940 cttatagtcatctctaacatggtcataaccaaatccatgaa 34324900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 7524386 - 7524435
Alignment:
Q  143 tcaacataaagtttcttccaagagttacttcttagactatatatatccca 192  Q
    ||||||| |||||||||||||||||| |||||||| |||||||| |||||    
T  7524386 tcaacatcaagtttcttccaagagttgcttcttaggctatatatttccca 7524435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 16920758 - 16920702
Alignment:
Q  136 tggcatatcaacataaagtttcttccaagagttacttcttagactatatatatccca 192  Q
    |||||| |||| || ||||||| ||||||| |||||||||||||||||||| |||||    
T  16920758 tggcatttcaatatcaagtttcctccaagaattacttcttagactatatatctccca 16920702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 27595668 - 27595754
Alignment:
Q  112 accttccgaagtcaaataacgttgtggcatatcaacataaagtttcttccaagagttacttcttagactatatatatcccaataggg 198  Q
    |||| ||||| || || |||| ||| ||||||||||||||||| ||| |||| |||||||   || ||||||||| |||||||||||    
T  27595668 acctaccgaactccaaaaacgatgtcgcatatcaacataaagtgtctcccaaaagttactctctaaactatatatttcccaataggg 27595754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 7429458 - 7429502
Alignment:
Q  260 accttatagtcatctcgaacatggtcataaccaaatccatgaata 304  Q
    ||||||||||||||||  |||||||||||||| |||||| |||||    
T  7429458 accttatagtcatctcttacatggtcataaccgaatccaagaata 7429502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 4e-82; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 14682148 - 14682451
Alignment:
Q  1 agtggtaacgggcacctcagtggccaggttaaaagacaccacaaatgtttcacttggttgacgatatgtttttccccaccaatgacaaaccccatttaag 100  Q
    ||||||||| || |||||| ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||    
T  14682148 agtggtaacaggaacctcattggccaggtcaaaagacaccacaaatgtttcaattggttgacgatatatttttccccaccaatggcaaaccccatttaag 14682247  T
Q  101 tacaccatagaaccttccgaagtcaaataacgttgtggcatatcaacataaagtttcttccaagagttacttcttagactatatatatcccaatagggac 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||  |||||||| |||||||||||| ||||||| ||       
T  14682248 tacaccatagaaccttccgaagtcaaataacgttgtcgcatatcaacgtaaagtttcttccaatggttacttcgtagactatatatgtcccaatgggtgg 14682347  T
Q  201 cgggcggtgcaacttg---ccactcatcttcacaacctccaatataaacaacatattgaatgaccttatagtcatctcgaacatggtcataaccaaatcc 297  Q
    |||| ||||| |||||   ||| |||||||         |||||||||||||||  |||| ||||||||| ||||||| |||| | ||||||||||||||    
T  14682348 cgggtggtgccacttgatcccaatcatctt---------caatataaacaacatgctgaaggaccttataatcatctctaacacgatcataaccaaatcc 14682438  T
Q  298 atgaatattaaaa 310  Q
    ||||||| |||||    
T  14682439 atgaatagtaaaa 14682451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 3368283 - 3368330
Alignment:
Q  255 gaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  3368283 gaattaccttatagtcatctctaacttggtcataaccaaatccatgaa 3368330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 4027516 - 4027476
Alignment:
Q  262 cttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  4027516 cttatagtcatctctaacacggtcataaccaaatccatgaa 4027476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 27183570 - 27183523
Alignment:
Q  255 gaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||| ||||| ||||||||||  |||||||||||||||||||||||||    
T  27183570 gaataaccttgtagtcatctctgacatggtcataaccaaatccatgaa 27183523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 302
Target Start/End: Original strand, 31135480 - 31135517
Alignment:
Q  265 atagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  31135480 atagtcatcttgaacatggtcatagccaaatccatgaa 31135517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 19225744 - 19225801
Alignment:
Q  138 gcatatcaacataaagtttcttccaagagttacttcttagactatatatatcccaata 195  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  19225744 gcatatcaacataaagttttttccaagagttactttttagactatatatgtcccaata 19225801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 19221281 - 19221209
Alignment:
Q  138 gcatatcaacataaagtttcttccaagagttacttcttagactatatatatcccaatagggaccgggcggtgc 210  Q
    |||||||||||| |||||| |||||||||||||  |||||||||||||| |||||||| || |||||||||||    
T  19221281 gcatatcaacatgaagttttttccaagagttacgccttagactatatatgtcccaataagggccgggcggtgc 19221209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 344721 - 344684
Alignment:
Q  263 ttatagtcatctcgaacatggtcataaccaaatccatg 300  Q
    |||||||||||||  |||||||||||||||||||||||    
T  344721 ttatagtcatctctgacatggtcataaccaaatccatg 344684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 344869 - 344828
Alignment:
Q  151 aagtttcttccaagagttacttcttagactatatatatccca 192  Q
    |||||||||||||||||||||| ||||||| ||||| |||||    
T  344869 aagtttcttccaagagttactttttagactgtatatctccca 344828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 23216413 - 23216471
Alignment:
Q  248 acatattgaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaatatt 306  Q
    |||||| |||||| ||||||||||| |  ||||||||||||||||||||||||||||||    
T  23216413 acatatcgaatgatcttatagtcatttataacatggtcataaccaaatccatgaatatt 23216471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 29130921 - 29130872
Alignment:
Q  255 gaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaata 304  Q
    |||||||||||||||||| |  |||||||||||||| |||||||||||||    
T  29130921 gaatgaccttatagtcatttataacatggtcataactaaatccatgaata 29130872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 32745195 - 32745250
Alignment:
Q  137 ggcatatcaacataaagtttcttccaagagttacttcttagactatatatatccca 192  Q
    ||||| ||||||| ||||||| |||| |||||||||||||| |||||||| |||||    
T  32745195 ggcatgtcaacatcaagtttcctccaggagttacttcttaggctatatatctccca 32745250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 32961060 - 32961117
Alignment:
Q  135 gtggcatatcaacataaagtttcttccaagagttacttcttagactatatatatccca 192  Q
    ||||||| ||||||| ||||||| |||| |||||||||||||  |||||||| |||||    
T  32961060 gtggcatgtcaacatcaagtttcctccacgagttacttcttacgctatatatctccca 32961117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 29012505 - 29012453
Alignment:
Q  255 gaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaatatta 307  Q
    |||||||||||||||| | |  |||| ||||||||||||||||||||| ||||    
T  29012505 gaatgaccttatagtcttttgtaacacggtcataaccaaatccatgaagatta 29012453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 29152571 - 29152619
Alignment:
Q  254 tgaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||||||| |||||||||| |  |||||||| |||||||||||||||||    
T  29152571 tgaatgacattatagtcatttgtaacatggttataaccaaatccatgaa 29152619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 29299679 - 29299627
Alignment:
Q  250 atattgaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||| |||||||||| ||||||| |  |||| |||||||||||||||||||||    
T  29299679 atatcgaatgaccttgtagtcatttttaacaaggtcataaccaaatccatgaa 29299627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 2703390 - 2703336
Alignment:
Q  248 acatattgaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  2703390 acatgttgaatgactttatagtcatccctaacatggtcataaccaaatccatgaa 2703336  T

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Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 30651171 - 30651131
Alignment:
Q  262 cttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  30651171 cttatagtcatctctaacatggtcataaccaaatccatgaa 30651131  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 31777517 - 31777477
Alignment:
Q  262 cttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  31777517 cttatagtcatctctaacatggtcataaccaaatccatgaa 31777477  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 37512659 - 37512600
Alignment:
Q  134 tgtggcatatcaacataaagtttcttccaagagttacttcttagactatatatatcccaa 193  Q
    |||||||||| ||||| ||||||  |||||||||| |||||||| |||||||||||||||    
T  37512659 tgtggcatattaacatcaagttttctccaagagttgcttcttaggctatatatatcccaa 37512600  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 32642699 - 32642642
Alignment:
Q  136 tggcatatcaacataaagtttcttccaagagttacttcttagactatatatatcccaa 193  Q
    ||||||| |||||| ||||||  |||||||||||||||||| ||||||||| ||||||    
T  32642699 tggcataacaacatcaagttttctccaagagttacttcttaaactatatatctcccaa 32642642  T

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Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 42782984 - 42782935
Alignment:
Q  137 ggcatatcaacataaagtttcttccaagagttacttcttagactatatat 186  Q
    |||||| |||||| ||||||| |||||||||||||||||||||| |||||    
T  42782984 ggcataacaacatcaagtttcctccaagagttacttcttagactgtatat 42782935  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 28994664 - 28994611
Alignment:
Q  248 acatattgaatgaccttatagtcatctcgaacatggtcataaccaaatccatga 301  Q
    |||||||| |||| |||||||||||| | ||||||||||||  |||||||||||    
T  28994664 acatattggatgagcttatagtcatccctaacatggtcatagtcaaatccatga 28994611  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 41227708 - 41227659
Alignment:
Q  137 ggcatatcaacataaagtttcttccaagagttacttcttagactatatat 186  Q
    |||||| |||||| ||||||| |||||| ||||||||||||||| |||||    
T  41227708 ggcataacaacatcaagtttcctccaagggttacttcttagactgtatat 41227659  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 42565277 - 42565333
Alignment:
Q  137 ggcatatcaacataaagtttcttccaagagttacttcttagactatatatatcccaa 193  Q
    ||||||||| ||| |||||| ||||||||||| |||||||| ||||| || ||||||    
T  42565277 ggcatatcagcatcaagtttattccaagagttgcttcttaggctataaatctcccaa 42565333  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 17603 - 17650
Alignment:
Q  255 gaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||    
T  17603 gaatgactttgtagtcatctctaacatggtcataaccaaatccatgaa 17650  T

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Target: scaffold0129; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 33999 - 34046
Alignment:
Q  255 gaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||||||||| |||||||||| |||||| |||||||||||||||||||    
T  33999 gaatgaccttgtagtcatctctaacatgctcataaccaaatccatgaa 34046  T

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Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 4877592 - 4877550
Alignment:
Q  151 aagtttcttccaagagttacttcttagactatatatatcccaa 193  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  4877592 aagtttcttccaagagttacttcttagactataaatctcccaa 4877550  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 48742276 - 48742341
Alignment:
Q  127 ataacgttgtggcatatcaacataaagtttcttccaagagttacttcttagactatatatatccca 192  Q
    ||||| ||| |||||||| | || || |||| |||||||||||||||||||||| ||||| |||||    
T  48742276 ataacattgaggcatatccagatcaattttcctccaagagttacttcttagactgtatatctccca 48742341  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 25627802 - 25627762
Alignment:
Q  262 cttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  25627802 cttatagtcatctctagcatggtcataaccaaatccatgaa 25627762  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 42445936 - 42445889
Alignment:
Q  255 gaatgaccttatagtcatctcgaacatggtcataaccaaatccatgaa 302  Q
    ||||||||||||||||||||  ||||  ||||||||||||||||||||    
T  42445936 gaatgaccttatagtcatctgtaacactgtcataaccaaatccatgaa 42445889  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 42446081 - 42446026
Alignment:
Q  137 ggcatatcaacataaagtttcttccaagagttacttcttagactatatatatccca 192  Q
    ||||| ||||||| ||||||| |||| | ||||||||||||||||||||| |||||    
T  42446081 ggcatgtcaacatcaagtttcctccacgggttacttcttagactatatatctccca 42446026  T

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Target: scaffold0831 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 1777 - 1805
Alignment:
Q  277 aacatggtcataaccaaatccatgaatat 305  Q
    |||||||||||||||||||||||||||||    
T  1777 aacatggtcataaccaaatccatgaatat 1805  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 33777 - 33833
Alignment:
Q  136 tggcatatcaacataaagtttcttccaagagttacttcttagactatatatatccca 192  Q
    |||||| |||| || ||||||| |||| |||||||||||||| |||||||| |||||    
T  33777 tggcatgtcaatatcaagtttcctccacgagttacttcttaggctatatatctccca 33833  T

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