View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5118_low_10 (Length: 258)
Name: NF5118_low_10
Description: NF5118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5118_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 42021265 - 42021490
Alignment:
| Q |
18 |
aactctgaattgggtttattcctcggagacaaagaagaagattcgttgaagaacttggaagataagaaaaaccatgatgcaaaattctcaatggtttcaa |
117 |
Q |
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| T |
42021265 |
aactctgaattgggtttattcctcggagacaaagaagaagattcgttggagaacttggaagataagaaaaaccatgatgcaaaattctcaatggtttcaa |
42021364 |
T |
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| Q |
118 |
gaagtgaaagattttatggtacaagtgtttatgcaacaaaggcaaagttttctgaaacaggaatttcacacgatatattgataaagtgtggagtagaaga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42021365 |
gaagtgaaagattttatggtacaagtgtttatgcaacaaaggcaaagttttctgaaacaggaatttcacacgatatattgataaagtgtggagtagaaga |
42021464 |
T |
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| Q |
218 |
agaaggatcaacatcaaagagtcaca |
243 |
Q |
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|||||||||||||||||||||||||| |
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| T |
42021465 |
agaaggatcaacatcaaagagtcaca |
42021490 |
T |
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