View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5118_low_21 (Length: 222)
Name: NF5118_low_21
Description: NF5118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5118_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 42623047 - 42623239
Alignment:
| Q |
18 |
ggaattaaggaaaagacatactatttttgatgtgagaaataagatcggaactgagagtgagagagaaatcggaaggagaatgaagattcatgggtttgaa |
117 |
Q |
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| T |
42623047 |
ggaattaaggaaaagacatactatttttgatgtgagagataagatcggaactgagagtgagagagaaatcggaaggagaatgaagattcatgggtttgaa |
42623146 |
T |
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| Q |
118 |
gagtacaagagccctctcatcgttaggaactggtagggattcaccttcttcttccacaatcggaggcaattcaggatcctaatcagaataatc |
210 |
Q |
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| T |
42623147 |
gagtacaagagccctctcatcgttaggaactggtaaggattcaccttcttcttccacaatcggaggcaattcaggatcctaatcagaataatc |
42623239 |
T |
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