View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5119_low_10 (Length: 248)
Name: NF5119_low_10
Description: NF5119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5119_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 27966092 - 27965863
Alignment:
| Q |
1 |
cacaaattttctacttagacaaaactattatactataatgtttattttttgcctcaatatatatttaatcaatttcttccccaatcaatcgttcattatg |
100 |
Q |
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| T |
27966092 |
cacaaattttctacttagacaaaactattatactataatgtttattttttgcctcaatatatatttaatcaatttcttccccaatcaatcgttcattatg |
27965993 |
T |
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| Q |
101 |
aaaaagacatagacaactctttttctttcttttattttgtctaatgaatgattggtgttttaggacctaatgtgccaacaaattcacatgtgccatgtgg |
200 |
Q |
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| T |
27965992 |
aaaaagacatcgacaactctttttctttcttttattttgtctaatgaatgattggtgttttaggacctaatgtgccaacaaattcacatgtgccatgtgg |
27965893 |
T |
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| Q |
201 |
tatgggcaacttgctttgtgattgaaatac |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
27965892 |
tatgggcaacttgctttgtgattgaaatac |
27965863 |
T |
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