View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5121-Insertion-4 (Length: 460)
Name: NF5121-Insertion-4
Description: NF5121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5121-Insertion-4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 453; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 8 - 460
Target Start/End: Complemental strand, 28275149 - 28274697
Alignment:
| Q |
8 |
gttatgacagttgtcccgttgtaaaagaaaatcagagaaaagagaacacacttttaaacccgagagatggctccatttgattcatttggcctgtagtttc |
107 |
Q |
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| T |
28275149 |
gttatgacagttgtcccgttgtaaaagaaaatcagagaaaagagaacacacttttaaacccgagagatggctccatttgattcatttggcctgtagtttc |
28275050 |
T |
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| Q |
108 |
caaagaacagcactgtcttcttatttcacatgaatttaacttctcttcttttgattctatcggcgagcaacgctgcttcttacttctctgttcaaagctt |
207 |
Q |
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| T |
28275049 |
caaagaacagcactgtcttcttatttcacatgaatttaacttctcttcttttgattctatcggcgagcaacgctgcttcttacttctctgttcaaagctt |
28274950 |
T |
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| Q |
208 |
ccagaatctgatgaccaatttttctctttagacattggaaaaccaataaatggaacaaaatttgacgattgaacagaattggtgcttgaaacgcccttag |
307 |
Q |
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| T |
28274949 |
ccagaatctgatgaccaatttttctctttagacattggaaaaccaataaatggaacaaaatttgacgattgaacagaattggtgcttgaaacgcccttag |
28274850 |
T |
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| Q |
308 |
aaatatttactactccatctgtgcaacaggaatcttcagatttcttgtgattaacagaagtaccaacttgaaaaccagatgaatagttttccacatcagc |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28274849 |
aaatatttactactccatctgtgcaacaggaatcttcagatttcttgtgattaacagaagtaccaacttgaaaaccagatgaatagttttccacatcagc |
28274750 |
T |
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| Q |
408 |
agttttcatatctgaagtaagcatactacccgtgaccatgtctgagaaatttg |
460 |
Q |
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| T |
28274749 |
agttttcatatctgaagtaagcatactacccgtgaccatgtctgagaaatttg |
28274697 |
T |
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