View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5123_low_3 (Length: 270)
Name: NF5123_low_3
Description: NF5123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5123_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 253
Target Start/End: Complemental strand, 39784048 - 39783811
Alignment:
| Q |
16 |
attctgcaaccccagtgagtttttaatagctgatcaatacaatcaggaaattttaaaattaactctattttgtttgtaacacctatcacattgcccaaca |
115 |
Q |
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| T |
39784048 |
attctgcaaccccagtgagtttttaatagctgatcaatacaatcaggaaattttaaaattaactctattttgtttgtaacacccatcacattgcccaaca |
39783949 |
T |
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| Q |
116 |
gggatatggagacaaatgcagtacagatattaagatataaaatgaataatcaacccaataacacagcagacaaaatttaaaatttcaccgagagttattt |
215 |
Q |
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| T |
39783948 |
gggatatagagacaaatgcagtacagatattaagatataaaatgaataatcaacccaataacacagcagacaaaatttaaaatttcaccgggagttattt |
39783849 |
T |
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| Q |
216 |
tattggaagattaaaggcagtacataatggtaccaaag |
253 |
Q |
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| T |
39783848 |
tattggaagattaaaggcagtacataatggtaccaaag |
39783811 |
T |
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