View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5124_high_10 (Length: 312)
Name: NF5124_high_10
Description: NF5124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5124_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 23368808 - 23369098
Alignment:
| Q |
1 |
acatacattgatgcaatatgtagtgccgcaagttctaaatacaaccaaaaagggacaaaaaactagagttcaaaagagaaggagatttaaagagcttcct |
100 |
Q |
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| T |
23368808 |
acatacactgatgcaatatgtagtgccgctagttctaaatacaaccaaaaagggacaaaaaactagagttcaaaagagaaggagatttaaagagcttcct |
23368907 |
T |
|
| Q |
101 |
attacaagacttaattttgattcagtatttgaagaaggtggtccatcatcaaactcatcagccaatggtaattgttgaatattcaactttctatattaca |
200 |
Q |
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| T |
23368908 |
attacaagacttaattttgattcattatttgaagaaggtggtccatcatcaaactcatcagccaatggtaattgttgaatattcaactttctatattaca |
23369007 |
T |
|
| Q |
201 |
caaataatagttaaattaatacactgcctaacaggggttaatcaagaaaattgcaatttggatgccttgaaagtagatatatatgatgatg |
291 |
Q |
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||||||||||||||||||||||| ||||||||| | |||||| |||||||||| |||||||||||||| |||||||||||||||||||||| |
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| T |
23369008 |
caaataatagttaaattaatacattgcctaacatgtgttaattaagaaaattgtaatttggatgccttcaaagtagatatatatgatgatg |
23369098 |
T |
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