View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5125-Insertion-11 (Length: 388)

Name: NF5125-Insertion-11
Description: NF5125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5125-Insertion-11
NF5125-Insertion-11
[»] chr8 (1 HSPs)
chr8 (7-388)||(10778000-10778380)


Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 7 - 388
Target Start/End: Complemental strand, 10778380 - 10778000
Alignment:
Q  7 acttataatatggaccatagaaagtaaatataggtacaattggccgaactccgagatataccttttataaatacaccctccaccctataatatagaccat 106  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10778380 acttataatctggaccatagaaagtaaacataggtacaattggccgaactccgagatataccttttataaatacaccctccagcctataatatagaccat 10778281  T
Q  107 atacattatatatcaaactaacgaaannnnnnnnnnnnnnngcttataacagtgagtgaccagaccagagcgtatgttttcgtaagtgtaggatttgcta 206  Q
    ||||||||| |||| ||| ||||||                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10778280 atacattatttatccaaccaacgaa-tttttatttttttttgcttataacagtgagtgaccagaccagagcgtatgttttcgtaagtgtaggatttgcta 10778182  T
Q  207 ttctaagactagctatatatagctgtatagttagttaaacacaaacaatttcaagatataagcatcgagagagtgaaattaacctcagaaagcaaaacac 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10778181 ttctaagactagctatatatagctgtatagttagttaaacacaaacaatttcaagatataagcatcgagagagtgaaattaacctcagaaagcaaaacac 10778082  T
Q  307 gatcaacaccattagaacggacaaatccgttagaattccagttatccgagacagaagattcctcgctcacttcatcttcttc 388  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||    
T  10778081 gatcaacaccattagaacggacaaatccgttagaattccagctatcggagacagaagattccttgctcacttcatcttcttc 10778000  T

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