View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5125-Insertion-7 (Length: 502)
Name: NF5125-Insertion-7
Description: NF5125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5125-Insertion-7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 460; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 8 - 502
Target Start/End: Complemental strand, 7013664 - 7013169
Alignment:
| Q |
8 |
gtttcctctagaaggaatcaagtaccagcaaggtctcctgtttgttttcctttccttatgaatatgaatatgaattactgtgaagaggtgaatgagaaat |
107 |
Q |
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| T |
7013664 |
gtttcctctagaaggaatcaagtaccagcaaggtctcctgtttgttttcctttccttatgaatatgaatatgaattactgtgaagaggtgaatgagaaat |
7013565 |
T |
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| Q |
108 |
ttagtagcagtagaagcattttggaagttcttagagagattgatgctgatgtggtggcactgcaagatgtgaaggcagaggaagagaagtgtatgaggcc |
207 |
Q |
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| T |
7013564 |
ttagtagcagtagaagcattttggaagttcttagagagattgatgctgatgtggtggcactgcaagatgtgaaagcagaggaagagaagtgtatgaggcc |
7013465 |
T |
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| Q |
208 |
tctttctgatttggctgctgctttagggatgaaatatgtttttgctgagagttgggctcctgaatatggaaatgctatcttatctaaatggcctattaag |
307 |
Q |
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| T |
7013464 |
tctttctgatttggctgctgctttagggatgaaatatgtttttgctgagagttgggctcctgaatatggaaatgctatcttatctaaatggcctattaag |
7013365 |
T |
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| Q |
308 |
aaatggaaagttcagaagattgcagatgatgatgatttcaggnnnnnnnncttctttcttaactcccttatttgattgttcagaagattgatgtctaact |
407 |
Q |
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| T |
7013364 |
aaatggaaagttcagaagattgcagatgatgatgatttcaggttttttttcttctttcttaactcccttatttgattgttcagaagattgatgtctaact |
7013265 |
T |
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| Q |
408 |
ttgcttgtctgtttaaggtaaaaatatggacatattagacaaaccctattaagaaaaccattaattata-tagtaatcacgtgacgcagttattgg |
502 |
Q |
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| T |
7013264 |
ttgcttgtctgtttaaggtaaaaatatggacatattagacaaaccctattaagaaaaccattaattatattagtaatcacgtgacgcagttattgg |
7013169 |
T |
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