View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5125_high_8 (Length: 294)
Name: NF5125_high_8
Description: NF5125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5125_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 36113911 - 36114194
Alignment:
| Q |
1 |
taacatgtaagcacttatccagcttaatcccttcaaatagggtttcctttcaatcaattaggatattttgtaacttgaaactttagcataggattcatta |
100 |
Q |
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| T |
36113911 |
taacatgtaagcacttattcagcttaatcccttcaattagggtttcctttcaatcaattaggatattttgtaacttgaaactttagcataggattcatta |
36114010 |
T |
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| Q |
101 |
attcatgtttacgaaattatatgtagttaaaccaaaatctcgaatacttgcttgaatcgacttatttgagcttatctacttgctatatagcatcgacact |
200 |
Q |
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||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36114011 |
atttatgtttaggaaattatatgtagttaaaccaaaatctcgaatacttgcttgaatcgacttatttgagcttatctacttgctatatagcatcgacact |
36114110 |
T |
|
| Q |
201 |
tctgatcaaacacatgtcacatgtgattacattcaattaaatcactctttagataaatactgtgtctgtgactccgtgtctgtg |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36114111 |
tctgatcaaacacatgtcacatgtgattacattcaattaaatcactctttagataaatactgtgtctgtgactccgtgtctgtg |
36114194 |
T |
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