View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5126_high_2 (Length: 496)

Name: NF5126_high_2
Description: NF5126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5126_high_2
NF5126_high_2
[»] chr4 (18 HSPs)
chr4 (178-467)||(11321768-11322057)
chr4 (26-137)||(33496120-33496231)
chr4 (74-136)||(35930170-35930232)
chr4 (74-134)||(39699935-39699995)
chr4 (86-137)||(14564654-14564705)
chr4 (74-136)||(11795102-11795164)
chr4 (74-136)||(15985141-15985203)
chr4 (74-128)||(17847286-17847340)
chr4 (74-127)||(23134963-23135016)
chr4 (351-396)||(23402091-23402136)
chr4 (351-396)||(23415925-23415970)
chr4 (351-396)||(23868749-23868794)
chr4 (351-396)||(23885844-23885889)
chr4 (74-127)||(31973722-31973775)
chr4 (74-127)||(39995358-39995411)
chr4 (150-191)||(41355186-41355227)
chr4 (74-130)||(8881967-8882023)
chr4 (74-130)||(33693287-33693343)
[»] chr3 (12 HSPs)
chr3 (26-137)||(19228927-19229038)
chr3 (26-137)||(49799058-49799169)
chr3 (29-137)||(28193288-28193396)
chr3 (61-135)||(19229168-19229242)
chr3 (74-136)||(21890301-21890363)
chr3 (74-135)||(51475439-51475500)
chr3 (74-128)||(32651011-32651065)
chr3 (74-135)||(21656649-21656710)
chr3 (61-98)||(49799299-49799336)
chr3 (80-137)||(52820996-52821053)
chr3 (74-130)||(35346425-35346481)
chr3 (74-130)||(42641343-42641399)
[»] chr8 (10 HSPs)
chr8 (26-137)||(5720468-5720579)
chr8 (26-137)||(18873931-18874042)
chr8 (26-137)||(43469156-43469267)
chr8 (61-136)||(18874160-18874235)
chr8 (61-127)||(43468960-43469026)
chr8 (74-130)||(15847243-15847299)
chr8 (74-128)||(22683944-22683998)
chr8 (61-98)||(5720709-5720746)
chr8 (74-135)||(23935122-23935183)
chr8 (87-128)||(25737138-25737179)
[»] chr5 (18 HSPs)
chr5 (26-137)||(42262793-42262904)
chr5 (26-137)||(33002919-33003030)
chr5 (26-137)||(35155315-35155426)
chr5 (26-95)||(35861246-35861315)
chr5 (61-125)||(42263034-42263098)
chr5 (62-130)||(33003161-33003228)
chr5 (74-135)||(20408664-20408725)
chr5 (74-135)||(35342311-35342372)
chr5 (81-124)||(39001985-39002028)
chr5 (74-128)||(11000919-11000973)
chr5 (74-136)||(14952212-14952274)
chr5 (74-128)||(20079448-20079502)
chr5 (61-135)||(35155111-35155185)
chr5 (74-135)||(28078354-28078415)
chr5 (81-130)||(42993656-42993705)
chr5 (74-130)||(6600090-6600146)
chr5 (74-134)||(30208352-30208412)
chr5 (61-101)||(35861441-35861481)
[»] chr1 (10 HSPs)
chr1 (26-137)||(49595114-49595225)
chr1 (63-135)||(49594911-49594983)
chr1 (74-135)||(25988220-25988281)
chr1 (74-135)||(45670435-45670496)
chr1 (74-136)||(19315771-19315833)
chr1 (74-135)||(7553207-7553268)
chr1 (74-135)||(44978717-44978778)
chr1 (74-135)||(46051339-46051400)
chr1 (74-135)||(46051581-46051642)
chr1 (151-187)||(46825739-46825775)
[»] chr2 (9 HSPs)
chr2 (26-137)||(17270318-17270429)
chr2 (74-135)||(2315166-2315227)
chr2 (74-137)||(17484497-17484560)
chr2 (74-137)||(42629843-42629906)
chr2 (74-128)||(16246384-16246438)
chr2 (74-127)||(17134126-17134179)
chr2 (74-135)||(40854740-40854801)
chr2 (74-130)||(1106513-1106569)
chr2 (74-130)||(19916177-19916233)
[»] chr7 (15 HSPs)
chr7 (74-128)||(221406-221460)
chr7 (74-134)||(43752726-43752786)
chr7 (74-125)||(41139603-41139654)
chr7 (74-128)||(27773032-27773086)
chr7 (74-136)||(35600070-35600132)
chr7 (74-136)||(47119879-47119941)
chr7 (74-135)||(5106172-5106233)
chr7 (74-135)||(11476505-11476566)
chr7 (74-135)||(30876390-30876451)
chr7 (74-135)||(31684083-31684144)
chr7 (74-135)||(31684325-31684386)
chr7 (74-135)||(37393947-37394008)
chr7 (74-135)||(43968450-43968511)
chr7 (74-130)||(1469684-1469740)
chr7 (74-130)||(27364293-27364349)
[»] chr6 (7 HSPs)
chr6 (74-135)||(9382650-9382711)
chr6 (74-135)||(16193441-16193502)
chr6 (80-130)||(10931102-10931152)
chr6 (74-135)||(12626767-12626828)
chr6 (74-135)||(29050403-29050464)
chr6 (74-130)||(10931342-10931398)
chr6 (74-130)||(17428226-17428282)
[»] scaffold0117 (1 HSPs)
scaffold0117 (74-137)||(14536-14599)
[»] scaffold0005 (1 HSPs)
scaffold0005 (86-137)||(252670-252721)
[»] scaffold0096 (1 HSPs)
scaffold0096 (74-127)||(47859-47912)
[»] scaffold0542 (1 HSPs)
scaffold0542 (74-130)||(2164-2220)


Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-119; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 178 - 467
Target Start/End: Complemental strand, 11322057 - 11321768
Alignment:
Q  178 tatttatttttatagaaatcaacaaatataaatagggcagtttgagttgatgctcagtctgaaaccctattcctctctcgtgcaactaccgattcatcaa 277  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  11322057 tatttttttatatagaaatcaacatatataaatagggcagtttgagttaatgctcagtctgaaaccctattcctctcgcctgcaactaccgattcatcaa 11321958  T
Q  278 ctcctaatggcaacaaagaaaaataagaattcgacagtggcagctgacaagaagattttcatgttcaatgaacacatctgcaaagttctgaagcaggtgc 377  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||| ||||||  |    
T  11321957 ctcctagtggcaacaaagaaaaataagaattcgacagtggcagctgagaagaagatattcatgttcaatgaatacatctacaaagttctggagcaggaac 11321858  T
Q  378 acccggacattgctatctccaccggggccatcgatatgatgaatattatgataagtaatgtgatgatgaagcttattcacgaatcctcca 467  Q
    |||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11321857 acccggacattgctatcttcgtcggggccatggatatgatgaatattatgataagtaatgtgatgatgaagcttattcacgaatcctcca 11321768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 33496231 - 33496120
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||||| |||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||| || || |||||||||||||||||    
T  33496231 atcataaagccttcaaaattgctccttaaatgacgaaaagtatgattctgaaacgattcaaaaactaaaaggatcactttgggacttttgaaacttaaag 33496132  T
Q  126 gaccattttgag 137  Q
    ||||||||||||    
T  33496131 gaccattttgag 33496120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 35930170 - 35930232
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttga 136  Q
    ||||| ||||||||||||||||||||   || ||||| ||||||||||||||||||| |||||    
T  35930170 tgaaacgattcaaaaactaaaaggatttgtttggaacctttgaaacttaaaggaccactttga 35930232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 39699995 - 39699935
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccatttt 134  Q
    ||||| |||||||||| |||||||||  ||| | ||||||||||||| |||||||||||||    
T  39699995 tgaaacgattcaaaaattaaaaggatttatttgaaacttttgaaactcaaaggaccatttt 39699935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 14564705 - 14564654
Alignment:
Q  86 aaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttgag 137  Q
    |||||| |||||| || || ||||||||||||||||||||||||| ||||||    
T  14564705 aaaacttaaaggaccactttggaacttttgaaacttaaaggaccactttgag 14564654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 11795164 - 11795102
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttga 136  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| |||||    
T  11795164 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 11795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 15985141 - 15985203
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttga 136  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| |||||    
T  15985141 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 15985203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 17847286 - 17847340
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    ||||| |||||||||||||||||||    || |||||||||||||||||||||||    
T  17847286 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaacttaaaggac 17847340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 23135016 - 23134963
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaagga 127  Q
    ||||| ||||||||||||||||||||   || | ||||||||||||||||||||    
T  23135016 tgaaacgattcaaaaactaaaaggatttgtttgaaacttttgaaacttaaagga 23134963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 23402091 - 23402136
Alignment:
Q  351 acatctgcaaagttctgaagcaggtgcacccggacattgctatctc 396  Q
    |||||| |||||||||||||||||| ||||| ||||||| ||||||    
T  23402091 acatcttcaaagttctgaagcaggttcacccagacattggtatctc 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 23415970 - 23415925
Alignment:
Q  351 acatctgcaaagttctgaagcaggtgcacccggacattgctatctc 396  Q
    |||||| |||||||||||||||||| ||||| ||||||| ||||||    
T  23415970 acatcttcaaagttctgaagcaggttcacccagacattggtatctc 23415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 23868749 - 23868794
Alignment:
Q  351 acatctgcaaagttctgaagcaggtgcacccggacattgctatctc 396  Q
    |||||| |||||||||||||||||| ||||| ||||||| ||||||    
T  23868749 acatcttcaaagttctgaagcaggttcacccagacattggtatctc 23868794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 23885844 - 23885889
Alignment:
Q  351 acatctgcaaagttctgaagcaggtgcacccggacattgctatctc 396  Q
    |||||| |||||||||||||||||| ||||| ||||||| ||||||    
T  23885844 acatcttcaaagttctgaagcaggttcacccagacattggtatctc 23885889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 31973722 - 31973775
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaagga 127  Q
    ||||| |||||||||||||||||||    || ||||||||||||||||||||||    
T  31973722 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaacttaaagga 31973775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 39995358 - 39995411
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaagga 127  Q
    ||||| ||||||||||||||||||||   || || |||||||||||||||||||    
T  39995358 tgaaacgattcaaaaactaaaaggatttgtttgggacttttgaaacttaaagga 39995411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 41355227 - 41355186
Alignment:
Q  150 tttaaaggacctttagatgtatttgatctatttatttttata 191  Q
    ||||||||||||||||||| ||||||||| |||||| |||||    
T  41355227 tttaaaggacctttagatgcatttgatctttttattattata 41355186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 8882023 - 8881967
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| |||||||||||||||||||    || || ||||||||||||||||||||||    
T  8882023 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggacca 8881967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 33693343 - 33693287
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| |||||||||| ||||||||   ||| ||||||||||||| |||||||||||    
T  33693343 tgaaacgattcaaaaattaaaaggacttatttggaacttttgaaatttaaaggacca 33693287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 1e-39; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 19229038 - 19228927
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| ||||| || || |||||||||||||||||    
T  19229038 atcataaagccttctaaattgctccttaaatgacggaaagtatgattctgaaacgattcaaaaactaaaatgatcactttgggacttttgaaacttaaag 19228939  T
Q  126 gaccattttgag 137  Q
    ||||||||||||    
T  19228938 gaccattttgag 19228927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 49799169 - 49799058
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| ||    || |||||||||||||||||    
T  49799169 atcataaagccttctaaattgctccttaaatgacggaaagtatgattctgaaacgattcaaaaactaaaaggaccacactgggacttttgaaacttaaag 49799070  T
Q  126 gaccattttgag 137  Q
    ||||||||||||    
T  49799069 gaccattttgag 49799058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 28193396 - 28193288
Alignment:
Q  29 ataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| ||||||||||| || |  |||||| |||||||||||||    
T  28193396 ataaagccttctaaattgctccttaaatgacggaaagtatgattctgaaacgattcaaaaattaaaaggatcactttgagacttttaaaacttaaaggac 28193297  T
Q  129 cattttgag 137  Q
     ||||||||    
T  28193296 tattttgag 28193288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 19229168 - 19229242
Alignment:
Q  61 gaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    |||||||||||||||||| ||||||||||||||||||| || || || |||||||||  ||||||||||| ||||    
T  19229168 gaaaatatgattctgaaacgattcaaaaactaaaaggaccactttgggacttttgaagtttaaaggaccactttg 19229242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 21890301 - 21890363
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttga 136  Q
    ||||| |||||||||||||||||||    || |||||||||||||||||||||||||||||||    
T  21890301 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaacttaaaggaccattttga 21890363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 51475439 - 51475500
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || ||||||||||||||||||||||||| ||||    
T  51475439 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaacttaaaggaccactttg 51475500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 32651011 - 32651065
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    ||||| ||||||||||||||||| ||   || |||||||||||||||||||||||    
T  32651011 tgaaacgattcaaaaactaaaagaatttgtttggaacttttgaaacttaaaggac 32651065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 21656649 - 21656710
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  21656649 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 21656710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 49799299 - 49799336
Alignment:
Q  61 gaaaatatgattctgaaatgattcaaaaactaaaagga 98  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  49799299 gaaagtatgattctgaaacgattcaaaaactaaaagga 49799336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 52821053 - 52820996
Alignment:
Q  80 gattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttgag 137  Q
    |||||||||||||||| ||    || ||||||||||||||||||||||||| ||||||    
T  52821053 gattcaaaaactaaaaagacttgtttggaacttttgaaacttaaaggaccactttgag 52820996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 35346481 - 35346425
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| |||||||||||||||||||    || || ||||||||||||||||||||||    
T  35346481 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggacca 35346425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 42641343 - 42641399
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| |||||||||||||||| |||  ||| || ||||||||||||||||| ||||    
T  42641343 tgaaacgattcaaaaactaaaaagatttatttgggacttttgaaacttaaagaacca 42641399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 5720579 - 5720468
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || || || || ||||||||||||||||     
T  5720579 atcataaagccttctaaattgctccttaaatgacggaaagtatgattctgaaatgattcaaaaactaaaatgaccactttgggacttttgaaacttaaat 5720480  T
Q  126 gaccattttgag 137  Q
    ||||||||||||    
T  5720479 gaccattttgag 5720468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 18874042 - 18873931
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||| ||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| || || |  ||||||||||||||||     
T  18874042 atcataaagcctcctaaactgctccttaaatgacagaaagtatgattctgaaacgattcaaaaactaaaaggaccactttgagacttttgaaacttaaat 18873943  T
Q  126 gaccattttgag 137  Q
    ||||||||||||    
T  18873942 gaccattttgag 18873931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 43469156 - 43469267
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||||||||||||||||||||||||  ||||  |||||| ||||| |||||||||||||||| || || || || |||||||||||||||||    
T  43469156 atcataaagccttctaaattgctccttaaatgatggaaagaatgattttgaaacgattcaaaaactaaaatgaccactttgggacttttgaaacttaaag 43469255  T
Q  126 gaccattttgag 137  Q
    || |||||||||    
T  43469256 gatcattttgag 43469267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 18874160 - 18874235
Alignment:
Q  61 gaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttga 136  Q
    |||||||||||||||||| ||||||||||||||||||| || || || ||||||||||||||||||| || |||||    
T  18874160 gaaaatatgattctgaaacgattcaaaaactaaaaggaccactttgggacttttgaaacttaaaggatcactttga 18874235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 43469026 - 43468960
Alignment:
Q  61 gaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaagga 127  Q
    |||| ||||||||||||| ||||||||||||||||| | || || || |||||||||||||||||||    
T  43469026 gaaagtatgattctgaaacgattcaaaaactaaaagaaccactttgggacttttgaaacttaaagga 43468960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 15847243 - 15847299
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| |||||||||||||||||||   ||| ||| |||||||||||||||||||||    
T  15847243 tgaaacgattcaaaaactaaaaggacttatttggagcttttgaaacttaaaggacca 15847299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 22683998 - 22683944
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    |||||||||||||||||||||||||    || || ||||||||||||||||||||    
T  22683998 tgaaatgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggac 22683944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 5720709 - 5720746
Alignment:
Q  61 gaaaatatgattctgaaatgattcaaaaactaaaagga 98  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  5720709 gaaagtatgattctgaaacgattcaaaaactaaaagga 5720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 23935183 - 23935122
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||   ||| || |||||||||||||||| ||||| ||||    
T  23935183 tgaaacgattcaaaaactaaaaggacttatttgggacttttgaaacttaaatgaccactttg 23935122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 25737179 - 25737138
Alignment:
Q  87 aaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    |||||||||||||| ||| | |||||||||||||||||||||    
T  25737179 aaactaaaaggatctatttgaaacttttgaaacttaaaggac 25737138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 6e-35; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 42262904 - 42262793
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||| ||||||||||||||| || |  |||||||||| ||||||    
T  42262904 atcataaagccttctaaattgctccttaaatgacggaaagtatgattctgaaacgattcagaaactaaaaggatcactttgagacttttgaaatttaaag 42262805  T
Q  126 gaccattttgag 137  Q
    ||||||||||||    
T  42262804 gaccattttgag 42262793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 33003030 - 33002919
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||||||||||||| || || || |||||||||||||||||    
T  33003030 atcataaagccttctaaattgctccttaaatgacggaaagtgtgattctgaaacgattcaaaaactaaaaggaccattttgggacttttgaaacttaaag 33002931  T
Q  126 gaccattttgag 137  Q
     | |||||||||    
T  33002930 tatcattttgag 33002919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 35155315 - 35155426
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||||||||||||||| |||||||||  ||| ||||||||||||| ||||||||||||||||||| || || || |||||||||||||||||    
T  35155315 atcataaagccttctaaattgctcattaaatgacaaaaagtatgattctgaaacgattcaaaaactaaaaggaccactttgggacttttgaaacttaaag 35155414  T
Q  126 gaccattttgag 137  Q
    |||| |||||||    
T  35155415 gaccgttttgag 35155426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 35861315 - 35861246
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaa 95  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  35861315 atcataaagccttctaaattgctccttaaatgacggaaaatatgattctgaaacgattcaaaaactaaaa 35861246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 42263034 - 42263098
Alignment:
Q  61 gaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    ||||| |||||||||||| ||||||||||||||||||| || || || |||||||||||||||||    
T  42263034 gaaaacatgattctgaaacgattcaaaaactaaaaggaccattttgggacttttgaaacttaaag 42263098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 33003161 - 33003228
Alignment:
Q  62 aaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||||||||||| ||| ||||||||||||||||||| || || || |||||||||| |||||||||||    
T  33003161 aaaatatgattctaaaacgattcaaaaactaaaaggaccactttgg-acttttgaaatttaaaggacca 33003228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 20408664 - 20408725
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||||||||    
T  20408664 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccattttg 20408725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 35342311 - 35342372
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||   ||| | ||||||||||||||||||||||| ||||    
T  35342311 tgaaacgattcaaaaactaaaaggacttatttgaaacttttgaaacttaaaggaccactttg 35342372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 39002028 - 39001985
Alignment:
Q  81 attcaaaaactaaaaggatcaattaggaacttttgaaacttaaa 124  Q
    |||||||||||||||||||  ||| |||||||||||||||||||    
T  39002028 attcaaaaactaaaaggatttatttggaacttttgaaacttaaa 39001985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 11000919 - 11000973
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    ||||| ||||||||||||||||||||   || || ||||||||||||||||||||    
T  11000919 tgaaacgattcaaaaactaaaaggatttgtttgggacttttgaaacttaaaggac 11000973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 14952274 - 14952212
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttga 136  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| |||||    
T  14952274 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 14952212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 20079448 - 20079502
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    ||||| |||||||||||||||||||    || |||||||||||||||||||||||    
T  20079448 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaacttaaaggac 20079502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 35155185 - 35155111
Alignment:
Q  61 gaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    |||| ||||||||| ||| |||||||||| ||||| || || || |  |||||||||||||||||||||| ||||    
T  35155185 gaaagtatgattctaaaacgattcaaaaattaaaacgaccactttgagacttttgaaacttaaaggaccactttg 35155111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 28078415 - 28078354
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  28078415 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 28078354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 42993656 - 42993705
Alignment:
Q  81 attcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||||||||||||||||    || |||||||||||||||||||||||||    
T  42993656 attcaaaaactaaaaggacttctttggaacttttgaaacttaaaggacca 42993705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 6600146 - 6600090
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| |||||||||||||||||||    || || ||||||||||||||||||||||    
T  6600146 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggacca 6600090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 30208412 - 30208352
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccatttt 134  Q
    ||||||||||||||||||||||||||   || |  |||||||||||||||| ||| |||||    
T  30208412 tgaaatgattcaaaaactaaaaggatttgtttgagacttttgaaacttaaaagacgatttt 30208352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 35861441 - 35861481
Alignment:
Q  61 gaaaatatgattctgaaatgattcaaaaactaaaaggatca 101  Q
    |||| ||||||||||||| |||||||||||||||| |||||    
T  35861441 gaaagtatgattctgaaacgattcaaaaactaaaatgatca 35861481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 6e-35; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 49595114 - 49595225
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| || || || || ||||||||||||||||     
T  49595114 atcataaagccttctaaattgctccttaaatgacggaaagtatgattctgaaacgattcaaaaactaaaatgaccactttgggacttttgaaacttaaat 49595213  T
Q  126 gaccattttgag 137  Q
    ||||||||||||    
T  49595214 gaccattttgag 49595225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 49594983 - 49594911
Alignment:
Q  63 aaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    |||||||||| ||||| ||||||||||||||||||| || || || |||||||||||||||||||||| ||||    
T  49594983 aaatatgattatgaaacgattcaaaaactaaaaggaccactttgggacttttgaaacttaaaggaccactttg 49594911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 25988281 - 25988220
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || ||||||||||||||||||||||| ||||||    
T  25988281 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaacttaaaggacgattttg 25988220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 45670496 - 45670435
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||   ||| || |||||||||||||||||||||| ||||    
T  45670496 tgaaacgattcaaaaactaaaaggacttatttgggacttttgaaacttaaaggaccactttg 45670435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 19315771 - 19315833
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttga 136  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| |||||    
T  19315771 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 19315833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 7553207 - 7553268
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || ||||||||||||| ||||||||||| ||||    
T  7553207 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaaattaaaggaccactttg 7553268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 44978778 - 44978717
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  44978778 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 44978717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 46051400 - 46051339
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| ||||||||||||||||||    ||| || |||||||||||||||||||||| ||||    
T  46051400 tgaaacgattcaaaaactaaaaggccttatttgggacttttgaaacttaaaggaccactttg 46051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 46051581 - 46051642
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  46051581 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 46051642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 46825739 - 46825775
Alignment:
Q  151 ttaaaggacctttagatgtatttgatctatttatttt 187  Q
    ||||||||||||||||||||||||| || ||||||||    
T  46825739 ttaaaggacctttagatgtatttgacctttttatttt 46825775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 17270318 - 17270429
Alignment:
Q  26 atcataaagccttctaaattgctccttaaatgaccgaaaatatgattctgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    ||||||||| |||||||||||||||||||||||| |||| || ||||||||||  |||||||||||||||  | || || ||||||||||||||||||||    
T  17270318 atcataaagtcttctaaattgctccttaaatgacggaaagtaagattctgaaacaattcaaaaactaaaaaaaccactttggaacttttgaaacttaaag 17270417  T
Q  126 gaccattttgag 137  Q
    ||||||||||||    
T  17270418 gaccattttgag 17270429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 2315166 - 2315227
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| ||||||||||||||||||||   || || |||||||||||||||||||||||||||    
T  2315166 tgaaacgattcaaaaactaaaaggatttgtttgggacttttgaaacttaaaggaccattttg 2315227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 17484560 - 17484497
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttgag 137  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||||    
T  17484560 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttgag 17484497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 42629906 - 42629843
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttgag 137  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||||    
T  42629906 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttgag 42629843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 16246384 - 16246438
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    ||||| |||||||||||||||||||    || |||||||||||||||||||||||    
T  16246384 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaacttaaaggac 16246438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 17134179 - 17134126
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaagga 127  Q
    ||||| |||||||||||| |||||| |  || ||||||||||||||||||||||    
T  17134179 tgaaacgattcaaaaacttaaaggacctgtttggaacttttgaaacttaaagga 17134126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 40854740 - 40854801
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| ||||||||||| |||||||  | || || |||||||||||||||||||||| ||||    
T  40854740 tgaaacgattcaaaaacaaaaaggactagtttgggacttttgaaacttaaaggaccactttg 40854801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 1106569 - 1106513
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    |||||||||||||||||||||||||    || | ||||||||||| |||||||||||    
T  1106569 tgaaatgattcaaaaactaaaaggacttgtttgcaacttttgaaatttaaaggacca 1106513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 19916177 - 19916233
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| |||||||||||||||| |||   || || ||||||||||||||||||||||    
T  19916177 tgaaacgattcaaaaactaaaaagatttgtttgggacttttgaaacttaaaggacca 19916233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 221406 - 221460
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    ||||| ||||||||||||||||||||   || |||||||||||||||||||||||    
T  221406 tgaaacgattcaaaaactaaaaggatttgtttggaacttttgaaacttaaaggac 221460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 43752786 - 43752726
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccatttt 134  Q
    ||||| |||||||||||||||||||    || || ||||||||||||||||||||||||||    
T  43752786 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccatttt 43752726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 41139603 - 41139654
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaag 125  Q
    ||||| |||||||||||||||||||   ||| ||||||||||||||||||||    
T  41139603 tgaaacgattcaaaaactaaaaggacttatttggaacttttgaaacttaaag 41139654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 27773086 - 27773032
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggac 128  Q
    ||||| |||||||||||||||||||  | || ||||||||||||| |||||||||    
T  27773086 tgaaacgattcaaaaactaaaaggactagtttggaacttttgaaatttaaaggac 27773032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 35600132 - 35600070
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttga 136  Q
    ||||| |||||||||||||||||||   ||| |  |||||||||||||||||||||| |||||    
T  35600132 tgaaacgattcaaaaactaaaaggacttatttgagacttttgaaacttaaaggaccactttga 35600070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 47119941 - 47119879
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttga 136  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| |||||    
T  47119941 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 47119879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 5106172 - 5106233
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| ||||||||||||||||||||   || |  |||||||||||||||||||| ||||||    
T  5106172 tgaaacgattcaaaaactaaaaggatttgtttgagacttttgaaacttaaaggacgattttg 5106233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 11476566 - 11476505
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  11476566 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 11476505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 30876390 - 30876451
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  30876390 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 30876451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 31684144 - 31684083
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  31684144 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 31684083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 31684325 - 31684386
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  31684325 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 31684386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 37394008 - 37393947
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  37394008 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 37393947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 43968450 - 43968511
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  43968450 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 43968511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 1469684 - 1469740
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| |||||||||||||||||||    || || ||||||||||||||||||||||    
T  1469684 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggacca 1469740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 27364349 - 27364293
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| ||||||||||||||||||||   || | ||||||| |||||||||||||||    
T  27364349 tgaaacgattcaaaaactaaaaggatttgtttgaaacttttaaaacttaaaggacca 27364293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 9382650 - 9382711
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || ||||||||||||||||||||||||| ||||    
T  9382650 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaacttaaaggaccactttg 9382711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 16193441 - 16193502
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||||||||    
T  16193441 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccattttg 16193502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 10931152 - 10931102
Alignment:
Q  80 gattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||||||||||||||| ||   || |||||||||||||||||||||||||    
T  10931152 gattcaaaaactaaaagtatttgtttggaacttttgaaacttaaaggacca 10931102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 12626767 - 12626828
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  12626767 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 12626828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 29050403 - 29050464
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttg 135  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||||| ||||    
T  29050403 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 29050464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 10931342 - 10931398
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| ||||||||||||||||||||   || |  ||||||||||||||||||||||    
T  10931342 tgaaacgattcaaaaactaaaaggatttgtttgtgacttttgaaacttaaaggacca 10931398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 17428282 - 17428226
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
    ||||| |||||||||||||||||||    || ||||||||||||| |||||||||||    
T  17428282 tgaaacgattcaaaaactaaaaggacttgtttggaacttttgaaatttaaaggacca 17428226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 14599 - 14536
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttgag 137  Q
    ||||| |||||||||||||||||||    || || |||||||||||||||||||| ||||||||    
T  14599 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggacaattttgag 14536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 252670 - 252721
Alignment:
Q  86 aaaactaaaaggatcaattaggaacttttgaaacttaaaggaccattttgag 137  Q
    |||||| |||||| || || ||||||||||||||||||||||||| ||||||    
T  252670 aaaacttaaaggaccactttggaacttttgaaacttaaaggaccactttgag 252721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 47912 - 47859
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaagga 127  Q
    |||||||| |||||||||||||||||   || || |||||||||||||||||||    
T  47912 tgaaatgactcaaaaactaaaaggatttgtttgggacttttgaaacttaaagga 47859  T

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Target: scaffold0542 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 2164 - 2220
Alignment:
Q  74 tgaaatgattcaaaaactaaaaggatcaattaggaacttttgaaacttaaaggacca 130  Q
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T  2164 tgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggacca 2220  T

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