View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5127-Insertion-1 (Length: 1024)

Name: NF5127-Insertion-1
Description: NF5127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5127-Insertion-1
NF5127-Insertion-1
[»] chr7 (70 HSPs)
chr7 (207-647)||(5932702-5933144)
chr7 (8-193)||(5932440-5932625)
chr7 (403-647)||(43429445-43429694)
chr7 (416-647)||(42910238-42910469)
chr7 (403-646)||(31876204-31876447)
chr7 (401-643)||(32823871-32824108)
chr7 (726-893)||(5933222-5933388)
chr7 (403-647)||(13852585-13852832)
chr7 (403-643)||(24360856-24361099)
chr7 (403-647)||(22366727-22366966)
chr7 (403-647)||(36921113-36921359)
chr7 (403-647)||(10069840-10070079)
chr7 (272-412)||(24361114-24361254)
chr7 (272-412)||(43429290-43429430)
chr7 (273-412)||(22366573-22366712)
chr7 (272-412)||(31876462-31876602)
chr7 (462-646)||(27054286-27054475)
chr7 (272-412)||(47903356-47903496)
chr7 (482-647)||(18672777-18672942)
chr7 (403-647)||(47903511-47903745)
chr7 (272-412)||(13852430-13852570)
chr7 (403-568)||(48675389-48675559)
chr7 (438-646)||(31982229-31982432)
chr7 (272-412)||(48675234-48675374)
chr7 (272-377)||(24361355-24361460)
chr7 (272-412)||(32823719-32823858)
chr7 (544-647)||(3211763-3211866)
chr7 (544-647)||(47070027-47070130)
chr7 (272-372)||(27054597-27054697)
chr7 (544-636)||(47204089-47204181)
chr7 (544-647)||(10672178-10672281)
chr7 (272-352)||(1335439-1335519)
chr7 (272-352)||(10069327-10069407)
chr7 (544-647)||(12117959-12118062)
chr7 (272-352)||(31982880-31982960)
chr7 (558-647)||(8768287-8768376)
chr7 (563-647)||(11205999-11206083)
chr7 (19-116)||(1521380-1521480)
chr7 (917-1001)||(5933389-5933478)
chr7 (209-264)||(11206377-11206432)
chr7 (358-412)||(18673015-18673069)
chr7 (358-412)||(31982468-31982522)
chr7 (499-647)||(36509024-36509158)
chr7 (350-412)||(36921374-36921436)
chr7 (272-352)||(7760226-7760306)
chr7 (213-264)||(8768982-8769033)
chr7 (213-264)||(10671833-10671884)
chr7 (213-264)||(13852321-13852372)
chr7 (209-264)||(31983015-31983070)
chr7 (213-264)||(47069681-47069732)
chr7 (213-264)||(47204476-47204527)
chr7 (213-264)||(47903260-47903311)
chr7 (213-264)||(3213241-3213292)
chr7 (217-264)||(7209288-7209335)
chr7 (213-264)||(12117612-12117663)
chr7 (209-264)||(24361513-24361568)
chr7 (213-264)||(27054751-27054802)
chr7 (272-320)||(18673109-18673157)
chr7 (279-351)||(36508460-36508532)
chr7 (216-264)||(43429191-43429239)
chr7 (209-264)||(10069202-10069257)
chr7 (218-264)||(1335335-1335381)
chr7 (213-263)||(32823617-32823666)
chr7 (549-647)||(31287295-31287393)
chr7 (549-643)||(40849325-40849419)
chr7 (358-393)||(10069784-10069819)
chr7 (225-264)||(36507971-36508010)
chr7 (605-643)||(1335884-1335922)
chr7 (549-616)||(524417-524484)
chr7 (213-262)||(31876651-31876700)
[»] chr5 (71 HSPs)
chr5 (272-654)||(10174194-10174588)
chr5 (403-647)||(12165500-12165749)
chr5 (403-647)||(2226440-2226689)
chr5 (401-647)||(36103168-36103419)
chr5 (403-647)||(12680632-12680881)
chr5 (403-647)||(9161259-9161506)
chr5 (403-654)||(30265347-30265598)
chr5 (403-647)||(32520782-32521026)
chr5 (408-642)||(38433967-38434206)
chr5 (403-629)||(332856-333089)
chr5 (272-412)||(333104-333244)
chr5 (272-412)||(12680896-12681036)
chr5 (272-412)||(42544775-42544915)
chr5 (272-412)||(9161104-9161244)
chr5 (272-412)||(36176921-36177061)
chr5 (482-647)||(36176446-36176611)
chr5 (272-412)||(32521041-32521181)
chr5 (403-647)||(36176677-36176906)
chr5 (273-412)||(30265613-30265754)
chr5 (280-412)||(23780863-23780995)
chr5 (280-412)||(23867816-23867948)
chr5 (272-412)||(36103432-36103572)
chr5 (272-412)||(2226704-2226844)
chr5 (272-409)||(12165992-12166129)
chr5 (403-540)||(35893262-35893405)
chr5 (403-646)||(17084444-17084681)
chr5 (544-647)||(666889-666992)
chr5 (544-647)||(27885704-27885807)
chr5 (544-647)||(701566-701669)
chr5 (544-647)||(8409335-8409438)
chr5 (544-647)||(38334372-38334475)
chr5 (403-552)||(42544930-42545086)
chr5 (272-352)||(35359058-35359138)
chr5 (562-647)||(42545822-42545907)
chr5 (544-643)||(11917804-11917903)
chr5 (544-647)||(15068825-15068928)
chr5 (544-647)||(30002347-30002450)
chr5 (422-645)||(23781024-23781228)
chr5 (422-645)||(23867977-23868181)
chr5 (401-488)||(38334685-38334772)
chr5 (403-484)||(9988614-9988695)
chr5 (209-264)||(36103630-36103685)
chr5 (272-320)||(9988769-9988817)
chr5 (272-320)||(38433820-38433868)
chr5 (209-264)||(667633-667688)
chr5 (213-264)||(11917418-11917469)
chr5 (213-264)||(27886435-27886486)
chr5 (213-264)||(38433710-38433761)
chr5 (279-352)||(17085123-17085196)
chr5 (25-171)||(38008714-38008866)
chr5 (213-264)||(12166183-12166234)
chr5 (213-264)||(15068473-15068524)
chr5 (213-264)||(30002024-30002075)
chr5 (209-264)||(30265810-30265865)
chr5 (213-264)||(35358949-35359000)
chr5 (213-264)||(36177124-36177175)
chr5 (213-264)||(42544671-42544722)
chr5 (214-264)||(8409004-8409054)
chr5 (218-264)||(9161001-9161047)
chr5 (358-412)||(38433893-38433947)
chr5 (209-264)||(701228-701284)
chr5 (360-412)||(38334785-38334837)
chr5 (213-264)||(17085256-17085307)
chr5 (218-264)||(2226903-2226949)
chr5 (358-412)||(17084696-17084750)
chr5 (218-264)||(32521241-32521287)
chr5 (542-647)||(35893442-35893540)
chr5 (224-264)||(333296-333336)
chr5 (224-264)||(12681088-12681128)
chr5 (213-264)||(10174098-10174149)
chr5 (513-568)||(9988541-9988593)
[»] chr2 (37 HSPs)
chr2 (401-654)||(25297805-25298064)
chr2 (403-647)||(11376163-11376407)
chr2 (403-647)||(44979332-44979581)
chr2 (403-632)||(44035586-44035820)
chr2 (404-609)||(17916453-17916665)
chr2 (403-647)||(34910586-34910835)
chr2 (403-647)||(19936682-19936926)
chr2 (272-412)||(19936941-19937081)
chr2 (273-412)||(34910431-34910570)
chr2 (272-410)||(44035431-44035569)
chr2 (272-412)||(17916681-17916821)
chr2 (272-412)||(44979596-44979736)
chr2 (447-647)||(18360121-18360326)
chr2 (272-412)||(25298077-25298217)
chr2 (272-375)||(11376018-11376121)
chr2 (544-647)||(9811739-9811842)
chr2 (544-647)||(20420777-20420880)
chr2 (544-647)||(36412918-36413021)
chr2 (401-488)||(20420474-20420561)
chr2 (557-647)||(16579002-16579092)
chr2 (272-352)||(18357021-18357101)
chr2 (543-632)||(42785102-42785191)
chr2 (272-352)||(42785510-42785590)
chr2 (209-264)||(9811399-9811454)
chr2 (209-262)||(17916872-17916925)
chr2 (209-264)||(11375910-11375965)
chr2 (213-264)||(36413659-36413710)
chr2 (213-264)||(44035319-44035370)
chr2 (213-264)||(44979788-44979839)
chr2 (213-264)||(16578648-16578699)
chr2 (209-264)||(25298270-25298325)
chr2 (358-412)||(18357478-18357532)
chr2 (360-412)||(20420409-20420461)
chr2 (553-643)||(41166625-41166715)
chr2 (549-619)||(44085956-44086026)
chr2 (209-264)||(19937144-19937198)
chr2 (214-264)||(42785648-42785698)
[»] chr8 (34 HSPs)
chr8 (403-647)||(36827349-36827598)
chr8 (403-647)||(14549505-14549749)
chr8 (403-647)||(18169589-18169832)
chr8 (403-647)||(18633155-18633398)
chr8 (403-643)||(30392356-30392601)
chr8 (272-412)||(10661270-10661410)
chr8 (403-636)||(10661425-10661662)
chr8 (506-647)||(44673109-44673250)
chr8 (403-647)||(36909905-36910138)
chr8 (272-412)||(36827613-36827753)
chr8 (403-643)||(33068869-33069109)
chr8 (272-409)||(14549349-14549486)
chr8 (272-412)||(30392202-30392342)
chr8 (468-647)||(6200493-6200677)
chr8 (272-409)||(6200670-6200808)
chr8 (273-409)||(3682042-3682178)
chr8 (401-641)||(3682194-3682433)
chr8 (273-412)||(18169847-18169983)
chr8 (273-412)||(18633413-18633549)
chr8 (272-412)||(36910153-36910297)
chr8 (272-412)||(44672905-44673033)
chr8 (558-647)||(5802513-5802602)
chr8 (213-264)||(36910350-36910401)
chr8 (213-263)||(33068278-33068328)
chr8 (209-258)||(6200878-6200927)
chr8 (272-352)||(33068379-33068459)
chr8 (213-264)||(3006591-3006642)
chr8 (213-264)||(5803265-5803316)
chr8 (213-264)||(10661166-10661217)
chr8 (209-264)||(44672797-44672852)
chr8 (553-647)||(3006194-3006283)
chr8 (209-264)||(14549232-14549287)
chr8 (534-646)||(42496458-42496565)
chr8 (209-247)||(28073227-28073265)
[»] chr3 (41 HSPs)
chr3 (403-647)||(6003950-6004199)
chr3 (422-647)||(35531719-35531944)
chr3 (403-647)||(21586409-21586652)
chr3 (422-632)||(32880602-32880812)
chr3 (401-562)||(50562223-50562389)
chr3 (272-412)||(6004214-6004354)
chr3 (273-412)||(21586667-21586807)
chr3 (509-647)||(48032698-48032836)
chr3 (276-412)||(27641989-27642125)
chr3 (272-412)||(32880418-32880558)
chr3 (276-412)||(33002643-33002779)
chr3 (272-412)||(35531978-35532118)
chr3 (272-412)||(39098060-39098200)
chr3 (272-412)||(43030547-43030689)
chr3 (403-573)||(33002794-33002969)
chr3 (272-412)||(50562402-50562536)
chr3 (422-561)||(39098234-39098378)
chr3 (408-604)||(43030708-43030895)
chr3 (544-647)||(10369610-10369713)
chr3 (544-647)||(35401791-35401894)
chr3 (544-647)||(51149289-51149392)
chr3 (273-352)||(9827666-9827745)
chr3 (544-632)||(34794923-34795011)
chr3 (544-647)||(4669214-4669317)
chr3 (403-488)||(27641889-27641974)
chr3 (544-647)||(33361312-33361415)
chr3 (542-647)||(27641779-27641879)
chr3 (209-264)||(35402224-35402279)
chr3 (213-264)||(6004406-6004457)
chr3 (215-264)||(33360968-33361017)
chr3 (209-262)||(39097957-39098010)
chr3 (213-264)||(4669666-4669717)
chr3 (209-264)||(10369220-10369275)
chr3 (213-264)||(21586862-21586913)
chr3 (213-264)||(34794607-34794658)
chr3 (213-264)||(51149676-51149727)
chr3 (214-264)||(43030430-43030480)
chr3 (225-264)||(9827797-9827836)
chr3 (225-264)||(32880325-32880364)
chr3 (549-646)||(42362738-42362835)
chr3 (213-264)||(48032868-48032918)
[»] chr1 (47 HSPs)
chr1 (403-647)||(39256192-39256441)
chr1 (403-647)||(24910610-24910859)
chr1 (403-647)||(33910333-33910582)
chr1 (403-632)||(33474718-33474952)
chr1 (408-647)||(45692078-45692317)
chr1 (403-632)||(32954356-32954585)
chr1 (403-647)||(16529048-16529297)
chr1 (401-647)||(51251987-51252228)
chr1 (272-412)||(44918663-44918803)
chr1 (462-646)||(11899375-11899564)
chr1 (272-412)||(24910874-24911014)
chr1 (272-412)||(45691918-45692058)
chr1 (273-412)||(33474564-33474703)
chr1 (403-647)||(1160590-1160823)
chr1 (272-412)||(29389154-29389294)
chr1 (272-412)||(51252241-51252381)
chr1 (272-412)||(39256456-39256597)
chr1 (276-412)||(16529312-16529451)
chr1 (403-643)||(44918818-44919048)
chr1 (272-412)||(33910597-33910737)
chr1 (272-412)||(11899135-11899277)
chr1 (491-642)||(6722384-6722529)
chr1 (272-364)||(32954170-32954261)
chr1 (272-363)||(1161618-1161709)
chr1 (544-632)||(5154969-5155057)
chr1 (544-632)||(8211639-8211727)
chr1 (346-412)||(32954275-32954341)
chr1 (544-647)||(29707703-29707801)
chr1 (544-632)||(20494094-20494182)
chr1 (403-514)||(29389309-29389425)
chr1 (353-412)||(1160838-1160897)
chr1 (209-264)||(20493757-20493812)
chr1 (579-632)||(29390137-29390190)
chr1 (213-264)||(39256655-39256706)
chr1 (213-264)||(8211291-8211342)
chr1 (213-264)||(32954050-32954101)
chr1 (213-264)||(33474460-33474511)
chr1 (273-352)||(42789495-42789574)
chr1 (209-264)||(45691806-45691861)
chr1 (223-263)||(42789628-42789668)
chr1 (213-264)||(5155362-5155413)
chr1 (213-264)||(1161761-1161812)
chr1 (213-264)||(16529519-16529570)
chr1 (213-263)||(51252435-51252485)
chr1 (224-264)||(11899029-11899069)
chr1 (224-264)||(44918566-44918606)
chr1 (213-264)||(29389045-29389096)
[»] chr6 (32 HSPs)
chr6 (272-632)||(10590970-10591349)
chr6 (403-647)||(35039495-35039744)
chr6 (403-636)||(33550600-33550838)
chr6 (403-647)||(13801539-13801783)
chr6 (403-632)||(15860005-15860238)
chr6 (403-647)||(25137421-25137669)
chr6 (272-412)||(10390847-10390987)
chr6 (403-647)||(10390597-10390832)
chr6 (272-412)||(15859850-15859990)
chr6 (272-412)||(13801798-13801938)
chr6 (272-412)||(33550445-33550585)
chr6 (276-372)||(25136897-25136993)
chr6 (544-647)||(12270905-12271008)
chr6 (338-412)||(35039759-35039833)
chr6 (544-647)||(5866639-5866742)
chr6 (274-348)||(10494260-10494334)
chr6 (516-631)||(10493964-10494079)
chr6 (272-339)||(35040115-35040182)
chr6 (273-351)||(5287790-5287868)
chr6 (213-264)||(5874171-5874222)
chr6 (213-264)||(12270569-12270620)
chr6 (217-264)||(13802001-13802048)
chr6 (217-264)||(13810888-13810935)
chr6 (209-264)||(33550328-33550383)
chr6 (364-412)||(25137358-25137406)
chr6 (213-264)||(10590863-10590914)
chr6 (210-264)||(5287923-5287977)
chr6 (213-262)||(35040231-35040280)
chr6 (213-264)||(15859738-15859789)
chr6 (404-440)||(10494226-10494262)
chr6 (225-264)||(10494400-10494439)
chr6 (213-264)||(25136784-25136835)
[»] scaffold0059 (4 HSPs)
scaffold0059 (401-643)||(69096-69343)
scaffold0059 (451-643)||(77202-77399)
scaffold0059 (272-412)||(69356-69496)
scaffold0059 (213-264)||(69559-69610)
[»] chr4 (56 HSPs)
chr4 (403-647)||(40899641-40899890)
chr4 (401-647)||(48996354-48996605)
chr4 (403-646)||(30193538-30193786)
chr4 (403-636)||(6333593-6333836)
chr4 (403-636)||(32136969-32137207)
chr4 (403-630)||(52344985-52345216)
chr4 (403-647)||(10218960-10219199)
chr4 (272-412)||(10218805-10218945)
chr4 (403-647)||(8176169-8176408)
chr4 (272-412)||(23937343-23937483)
chr4 (272-412)||(30193801-30193941)
chr4 (272-412)||(40899905-40900045)
chr4 (403-647)||(31301676-31301915)
chr4 (403-632)||(40806397-40806623)
chr4 (273-412)||(6333439-6333578)
chr4 (272-411)||(32136814-32136953)
chr4 (272-412)||(8176423-8176563)
chr4 (401-596)||(23937130-23937330)
chr4 (272-412)||(40806638-40806778)
chr4 (272-412)||(48996201-48996341)
chr4 (403-595)||(43630828-43631007)
chr4 (528-647)||(26477750-26477869)
chr4 (495-632)||(52345225-52345352)
chr4 (542-654)||(5261404-5261517)
chr4 (544-647)||(29639994-29640097)
chr4 (544-647)||(50570579-50570682)
chr4 (273-361)||(43630695-43630783)
chr4 (544-647)||(42558082-42558185)
chr4 (544-647)||(29643328-29643431)
chr4 (544-647)||(36078683-36078786)
chr4 (272-352)||(5261851-5261931)
chr4 (272-361)||(52344849-52344940)
chr4 (401-488)||(29639730-29639817)
chr4 (272-352)||(51394835-51394915)
chr4 (277-337)||(31301366-31301426)
chr4 (213-264)||(40900102-40900153)
chr4 (358-412)||(31301607-31301661)
chr4 (213-264)||(5261983-5262034)
chr4 (209-264)||(23937537-23937592)
chr4 (213-264)||(29644144-29644195)
chr4 (213-264)||(30193994-30194045)
chr4 (213-264)||(50570977-50571028)
chr4 (544-625)||(51395253-51395334)
chr4 (214-264)||(36077586-36077636)
chr4 (213-263)||(42557737-42557787)
chr4 (25-171)||(4233672-4233822)
chr4 (213-264)||(29636786-29636837)
chr4 (213-264)||(40806837-40806888)
chr4 (209-264)||(43630586-43630641)
chr4 (213-264)||(48996097-48996148)
chr4 (213-264)||(10218691-10218742)
chr4 (213-264)||(32136705-32136756)
chr4 (377-412)||(43630778-43630813)
chr4 (377-412)||(52344935-52344970)
chr4 (209-247)||(14866785-14866823)
chr4 (549-598)||(45983798-45983847)
[»] scaffold0013 (6 HSPs)
scaffold0013 (401-647)||(106310-106561)
scaffold0013 (401-568)||(128917-129089)
scaffold0013 (272-412)||(106156-106296)
scaffold0013 (272-412)||(128763-128903)
scaffold0013 (213-260)||(128649-128696)
scaffold0013 (213-260)||(106042-106089)
[»] scaffold0029 (4 HSPs)
scaffold0029 (404-647)||(47327-47575)
scaffold0029 (408-647)||(40131-40375)
scaffold0029 (272-412)||(40395-40536)
scaffold0029 (218-264)||(40594-40640)
[»] scaffold0308 (2 HSPs)
scaffold0308 (544-647)||(5474-5577)
scaffold0308 (213-264)||(5902-5953)


Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 207 - 647
Target Start/End: Original strand, 5932702 - 5933144
Alignment:
Q  207 agaaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaacnnnnnnntattacattaactctaatattgctaacttgttaca 306  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||    
T  5932702 agaaagcatgcggtttggtttggttaagttgatttttaaaaagtcatccaaaccaaacaaaaaa-tattacattaactctaatattgccaacttgttaca 5932800  T
Q  307 aaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaa 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  5932801 aaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaaatatgtaaaattaagaagaaacataagcaagaaa 5932900  T
Q  407 caaattcatcactgaaaatgaattgaaagaga--------tgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaaagagattatt 498  Q
     ||||| || |  |||| | ||  |||| | |        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5932901 taaatt-atta--gaaagt-aaaggaaacaaattcatcactgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaaagagattatt 5932996  T
Q  499 cttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgca---- 594  Q
    |||||||||||||||||||||||||||||||||||      ||||||||||| || |||||||||||||| ||||| ||||||||| |||||||||        
T  5932997 cttgagctatgtaattgggctagtacatgtttaag------tcattattcttacgatttggtttggtttggttcggttgctgagatacaaaccgcaaacc 5933090  T
Q  595 -aaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
     ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  5933091 gaaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaatttatccgaac 5933144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 5932440 - 5932625
Alignment:
Q  8 cagacaattatatttcgttttaatttcattaaatcacctacaaacaaaatgaaatgaatggttgacaaaatcaaaaggcaataaacaaatccaatattaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5932440 cagacaattatatttcgttttaatttcattaaatcacctacaaacaaaatgaaatgaatggttgacaaaatcaaaaggcaataaacaaatccaatattaa 5932539  T
Q  108 accaacaatgaagccgttacaaaacatactctcctatatatttctcatttcattggagttcattgatctacccgtaattcttttga 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5932540 accaacaatgaagccgttacaaaacatactctcctatatatttctcatttcattggagttcattgatctacccgtaattcttttga 5932625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 43429445 - 43429694
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    ||||||||||||||| || |||||||| |||||||||| ||| ||||||||||  || ||||||||||||||||||||||||||||     ||||||| |    
T  43429445 gaaacaaattcatcattggaaatgaatcgaaagagatggaaaggaattagaattgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagatttt 43429544  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  43429545 tcttgagctatgtaattggacgagtacacgtttaagtaatagtcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaac 43429644  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || |||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  43429645 cgaaccgaaccatgcggtttagtgcaaaagtcatccgaattcatccgaac 43429694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 416 - 647
Target Start/End: Complemental strand, 42910469 - 42910238
Alignment:
Q  416 cactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgt 510  Q
    ||||| ||||||||||||||||||| ||| |||||||||||  | ||||||||||||||||||||||||| ||     ||||||||||||||||||||||    
T  42910469 cactggaaatgaattgaaagagatggaaaggaattagaatcggacctgatggtgcaacaatggaaaaatcaaatcaaaagagattattcttgagctatgt 42910370  T
Q  511 aattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgt 610  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||| |||||||||||||||||||||||| |||||||||     
T  42910369 aattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttgg-----ttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgc 42910275  T
Q  611 gcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
     ||||||||||||||||||||| ||||||||||||||    
T  42910274 acggttcagtgcaaaagtcatccgaattcatccgaac 42910238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 403 - 646
Target Start/End: Complemental strand, 31876447 - 31876204
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||| ||||||||| ||||||||| ||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||     |||||||||    
T  31876447 gaaacaaagtcatcactggaaatgaattaaaagagatggaaaagaattagaatcgaatctgatggtgcaacaatggaaaaatcgaattaaaagagattat 31876348  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||     |||||||||||||||||||||    
T  31876347 tcttgagctatgtaactgggctagtacatgtttaagtaatattcattatttttgcggtttggtttggtttggtt-----gctgagatgcaaaccgcaaac 31876253  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaa 646  Q
    |  | |||||||  ||||||| ||||||||||||| |||||||||||||    
T  31876252 caaatcgaaccgcacggttcattgcaaaagtcatccgaattcatccgaa 31876204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 401 - 643
Target Start/End: Original strand, 32823871 - 32824108
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaaa-----gagatt 495  Q
    ||||||||||||||||| ||| |||||||||||| ||||| ||| ||||||||||| || ||||||||||||||||||||||||||||      ||||||    
T  32823871 atgaaacaaattcatcagtgagaatgaattgaaatagatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaggagatt 32823970  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||          ||||||||||||||||||||    
T  32823971 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttggt----------tgctgagatgcaaaccgcaa 32824060  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  32824061 accgaaccgaaccgtgcggttcagtgcaaaagccatccgaattcatcc 32824108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 726 - 893
Target Start/End: Original strand, 5933222 - 5933388
Alignment:
Q  726 ccctaatcatctgagtcccaa-tccataattctctagccaattttattttgttttctgaaaccctaaaatcaaacgaaatgttgcatggtatatattcaa 824  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  5933222 ccctaatcatcagagtcccaaatccataattctctagccaattttattttgttttctgaaaccctaaaatcaaacgaaatgttgcatgg--tatattcaa 5933319  T
Q  825 aggatgccttattacttagatacttgtggtgacttgttttgctgatcgacagtttccgaaataaatgga 893  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5933320 aggatgccttattacttagatacttgtggtgacttgttttgctgatcgacaggttccgaaataaatgga 5933388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 13852585 - 13852832
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||| |||| || ||||||||  ||||||| ||||||||||     |||||||||    
T  13852585 gaaacaaattcatcactgtaaatgaattgaaagagatggaaaggaattataatcgaacctgatggt--aacaatgaaaaaatcgaatcaaaagagattat 13852682  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||||||||||||||||| | |||||||| ||||| ||||||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||    
T  13852683 tcttgagctatgtaattgagttagtacatatttaaataatattcattattcttgcagtttggtttggtttggttcagttgctgagatgcaaaccgcaaac 13852782  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
     | ||||||||   ||||||||||||||||||||| ||||||||||||||    
T  13852783 agaaccgaaccactcggttcagtgcaaaagtcatccgaattcatccgaac 13852832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 403 - 643
Target Start/End: Complemental strand, 24361099 - 24360856
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||| ||| ||| ||||||||||  ||  |||||||||||||||| ||||||||||     || ||||||    
T  24361099 gaaacaaattcatcactggaaatgaattgaaagaaatggaaaggaattagaattgaacttgatggtgcaacaatgaaaaaatcgaatcaaaagggattat 24361000  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||  |||    
T  24360999 tcttgagctatgtaattgggctagtacatatttaagtaatagtcattattcttgcggtttggtttggtttggttcggttgctgagacgcaaaccg--aac 24360902  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    || ||||||| ||| ||||| |||||||||||||| ||||||||||    
T  24360901 cgaaccgaactgtgtggttctgtgcaaaagtcatccgaattcatcc 24360856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 22366727 - 22366966
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||| ||||     |||||||||    
T  22366727 gaaacaaattcatcactggaaatgaattgaaagagatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaaccgaattgaaagagattat 22366826  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||          |||| |||||||||||||||||    
T  22366827 tcttgagctatgtaattgggctagtacatgtttgagtaatattcattattcttgcggtttggtttggt----------tgctaagatgcaaaccgcaaac 22366916  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || ||| || ||  ||||| ||||||||||||||| ||||||||| ||||    
T  22366917 cgaaccaaatcgcacggtttagtgcaaaagtcatccgaattcatctgaac 22366966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 36921359 - 36921113
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||| |||| |||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||| ||||||||||     || ||||||    
T  36921359 gaaacaaatttatcattgaaaatgaattgaaagagatggaaaagaattagaatcgaacctgatggtgcaacaatgaaaaaatcgaatcaaaagcgattat 36921260  T
Q  498 tcttgagctatgtaattgggc--tagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||     ||| ||||||||||||||| ||||    
T  36921259 tcttgagctatgtaattgggggttagtacatgtttaagtaatattcattattcttgcggtttggtttggtt-----cggttgctgagatgcaaactgcaa 36921165  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||  ||||||||| | |||||| ||||||||| ||| ||||||||||||||    
T  36921164 accaaaccgaaccgcgtggttcaatgcaaaagtaatccgaattcatccgaac 36921113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 10069840 - 10070079
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    ||||||||||||||| || |||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||||||||||| ||     | |||||||    
T  10069840 gaaacaaattcatcattggaaatgaattgaaggagatggaaaggaattagaatcaaacctgatggtgcaacaatggaaaaatcaaatcaaaaaagattat 10069939  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||| |||||||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||||          |||||||||||||| |||||||    
T  10069940 tcttgggctatgtaattgggccggtacaagtttaagtaatattgattattcttgcggtttggtttggt----------tgctgagatgcaaatcgcaaac 10070029  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || || |||| |||||||||||||||||||||||| ||||||||||||||    
T  10070030 cgaactgaactgtgcggttcagtgcaaaagtcatccgaattcatccgaac 10070079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 24361254 - 24361114
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  24361254 tattacattaactctaatattgtcaacttgttacaaaataaacataggacattttattttgatgtttatatgataaaatattatgtaaaacttatatcaa 24361155  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  24361154 aatatgtaaaattaagaagaaacataagcatgaaacaaatt 24361114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 43429290 - 43429430
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43429290 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgatgtttatatgataaaatattaggtaaaacttatatcaa 43429389  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||  ||||||||||||||||||||||||||||||| ||||    
T  43429390 aattggtaaaattaagaagaaatataagcatgaaactaatt 43429430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 273 - 412
Target Start/End: Original strand, 22366573 - 22366712
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 372  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22366573 attacattaactctaatattgccaatttgttacaaaataaacataggacattttattttgatgtttatatgataaaatattaggtaaaacttatatcaaa 22366672  T
Q  373 atatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||| ||||||||||||||||| ||||||||||||||||||    
T  22366673 ataggtaaaattaagaagaaacataagcatgaaacaaatt 22366712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 31876602 - 31876462
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31876602 tattacattaactctaatattgccaacttgttacaaaataatcataggacattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 31876503  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| |||||||  |||||||||    
T  31876502 aataggtaaaattaagaagaaacataagcaaaaaacaaatt 31876462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 462 - 646
Target Start/End: Complemental strand, 27054475 - 27054286
Alignment:
Q  462 tgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtt 556  Q
    |||||||||||||||| ||||||||||     |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  27054475 tgatggtgcaacaatgaaaaaatcgaatcaaaagagattattcttgagttatgtaattgggctagtacatatttaagtaatattcattattcttgtggtt 27054376  T
Q  557 tggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaa 646  Q
    |||||||||||| ||||  |||||| ||||||||||||||||  ||| || ||  ||||| |||||||||||||||||||||||||||||    
T  27054375 tggtttggtttggttcgattgctgatatgcaaaccgcaaaccaaaccaaatcgcacggtttagtgcaaaagtcatctgaattcatccgaa 27054286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 47903356 - 47903496
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    |||||| |||||||||||||||| |  |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  47903356 tattactttaactctaatattgccaggttgttacaaaataaacatattacattttattttgttgtttatatgataaaatattaggtaaaacttatatgaa 47903455  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  47903456 aataggtaaaattaagaagaaacataagcatgaaacaaatt 47903496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 482 - 647
Target Start/End: Complemental strand, 18672942 - 18672777
Alignment:
Q  482 aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctga 581  Q
    |||| ||||||||||||| || |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  18672942 aatcaaaagagattattcctgtgctatgtaattgggctagtacaagtttaagtaatattgattattattgcggtttggtttggtttggttcggttgctga 18672843  T
Q  582 gatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||||||||| ||||||| ||||||| | ||||| || ||||||| ||||| ||||||||| ||||    
T  18672842 gatgcaaaccacaaaccgaaccgaactgcgcggtccaatgcaaaaatcatccgaattcatctgaac 18672777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 47903511 - 47903745
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||| |||| || ||||||||||||||||| ||||||||||     | | | |||    
T  47903511 gaaacaaattcatcactggaaatgaattgaaagatatggaaatgaattataatcgaacctgatggtgcaacaatgaaaaaatcgaatcgaaaaatagtat 47903610  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||| ||||||||               ||||||||||||| ||||||| ||| |||| ||||| ||||||||||||||||||||||    
T  47903611 tcttgagctatgtaatttggctagta---------------ttcattattcttgtggtttgggttgttttggttcggttgctgagatgcaaaccgcaaac 47903695  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || | ||||| | |||||||||||||||||||||| ||||||||||||||    
T  47903696 cgaaacgaactgcgcggttcagtgcaaaagtcatccgaattcatccgaac 47903745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 13852430 - 13852570
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    |||||||||||||| |||||||  |||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  13852430 tattacattaactccaatattgtcaacttggtacaaaataaacataggacattttattttgctatttatatgataaaatattagataaaacttatatcaa 13852529  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||| ||||||||||| ||||||||||||||||||    
T  13852530 aataggtaaagttaagaagaaacataagcatgaaacaaatt 13852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 403 - 568
Target Start/End: Original strand, 48675389 - 48675559
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaa-----aaatcgaaagagattat 497  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||     ||| | |||||| ||||    
T  48675389 gaaacaaattcatcactgaaaatgaattcaaagagatggaaatgaattagaatcaaacctgatggtgcaacaatggaataatcaaaccaaaagaggttat 48675488  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttg 568  Q
    | || |||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||| ||| |||||    
T  48675489 tttttagctatgtaattaggctaatacatgtttaagtaatatttattattcttacggtttgattttgtttg 48675559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 438 - 646
Target Start/End: Complemental strand, 31982432 - 31982229
Alignment:
Q  438 atgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaa 532  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||| ||     |||||||||||||| |||||||||||||||| |||||  |||||    
T  31982432 atgaaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcaaatcaaaagagattattcttgggctatgtaattgggctggtacaaatttaa 31982333  T
Q  533 gtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    |||||||| |||||| |||||||||||||||||          |||| |||||||||||||||| |  ||| ||||| || |||||||||||||||||||    
T  31982332 gtaatattgattatttttgcggtttggtttggt----------tgctaagatgcaaaccgcaaatcaaaccaaaccgcgcagttcagtgcaaaagtcatc 31982243  T
Q  633 tgaattcatccgaa 646  Q
    ||||||||||||||    
T  31982242 tgaattcatccgaa 31982229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 48675234 - 48675374
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||| ||||||||||||||||  || ||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  48675234 tattatattaactctaatattgtcaatttgttacaaaataaatataggacattttattttgctgtttatatgataaaatattaggcaaaatttatatcaa 48675333  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  48675334 aataggtaaaattaagaagaaacataaacatgaaacaaatt 48675374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 272 - 377
Target Start/End: Complemental strand, 24361460 - 24361355
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  24361460 tattacattaactctaatattgtcaacttgttacaaaataaacataggacattttattttgatgtttatatgataaaatattatgtaaaacttatatcaa 24361361  T
Q  372 aatatg 377  Q
    ||||||    
T  24361360 aatatg 24361355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 32823719 - 32823858
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| | |  | |||| |||||||||||||||||||||    
T  32823719 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgctgttca-aaaaaaaaaaattaggtaaaacttatatcaa 32823817  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| |||| |||||| ||||||    
T  32823818 aataggtaaaattaagaagaaacataaacatgaagcaaatt 32823858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 3211866 - 3211763
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  3211866 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 3211767  T
Q  644 gaac 647  Q
    ||||    
T  3211766 gaac 3211763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 47070027 - 47070130
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  47070027 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 47070126  T
Q  644 gaac 647  Q
    ||||    
T  47070127 gaac 47070130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 272 - 372
Target Start/End: Complemental strand, 27054697 - 27054597
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||| | |||||    
T  27054697 tattacattaactctaatatttccaacttgttacaaaataaacatataacattttattttgatgtttatatgataaaatattaggtaaaactcacatcaa 27054598  T
Q  372 a 372  Q
    |    
T  27054597 a 27054597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 544 - 636
Target Start/End: Complemental strand, 47204181 - 47204089
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaa 636  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||    
T  47204181 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatctgaa 47204089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 10672178 - 10672281
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||  |||||||||  |||||||||| ||| ||||||    
T  10672178 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatcc 10672277  T
Q  644 gaac 647  Q
    ||||    
T  10672278 gaac 10672281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 1335439 - 1335519
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  1335439 tattacattaactctaatattgccaacttattacaaaataaacataggacattttattttgttgtttacatgataaaatat 1335519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 10069327 - 10069407
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||    
T  10069327 tattacattaactctaatattgccaacttgttacaaaataaacatgggacattttattttgctgtttagatgataaaatat 10069407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 12117959 - 12118062
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| ||||||||| |||||||||| || || |||||||||||||| ||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  12117959 tatttttgcggtttagtttggtttggtttggttgctgagatgcaaatcgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 12118058  T
Q  644 gaac 647  Q
    ||||    
T  12118059 gaac 12118062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 31982960 - 31982880
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||| | ||||||||||||    
T  31982960 tattacattaactctaatattgccaacttattacaaaataaacataggacattttattttgctgttaacatgataaaatat 31982880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 558 - 647
Target Start/End: Complemental strand, 8768376 - 8768287
Alignment:
Q  558 ggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    ||||||||||| ||||| |||||||||||||||| ||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||||||    
T  8768376 ggtttggtttggttcggttgctgagatgcaaaccacaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaac 8768287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 563 - 647
Target Start/End: Complemental strand, 11206083 - 11205999
Alignment:
Q  563 ggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||||||    
T  11206083 ggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaac 11205999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 1521480 - 1521380
Alignment:
Q  19 atttcgttttaatttcattaaatcacctacaaacaaaatgaaatgaatggttgacaaaatcaaaaggcaataaacaaatcca---atattaaaccaacaa 115  Q
    |||| ||||| |||||||||||||| |||| |||||||| |||  |||||||||||||||||||| |||||||||||||| |   |||||||||||||||    
T  1521480 attttgttttgatttcattaaatcagctaccaacaaaataaaaaaaatggttgacaaaatcaaaaagcaataaacaaatcaaattatattaaaccaacaa 1521381  T
Q  116 t 116  Q
    |    
T  1521380 t 1521380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 917 - 1001
Target Start/End: Original strand, 5933389 - 5933478
Alignment:
Q  917 aaatttcatcagttgcgt-agata-tggaaa-tgaaaggaagtacttgactttgaaggcagcag-atcgac-aacgttcagctatttaca 1001  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  5933389 aaatttcatcagttgcgttagataatggaaaatgaaaggaagtacttgactttgaaggcagcagaatcgacaaacgttcagctatttaca 5933478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 11206432 - 11206377
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11206432 aaaacatgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 11206377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 358 - 412
Target Start/End: Complemental strand, 18673069 - 18673015
Alignment:
Q  358 aaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  18673069 aaaacttatatcaaaataagtaaaattaagaagaaacataagcatgaaacaaatt 18673015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 358 - 412
Target Start/End: Complemental strand, 31982522 - 31982468
Alignment:
Q  358 aaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  31982522 aaaacttatatcaaaatatttaaaattaagaagaaatataaacatgaaacaaatt 31982468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 499 - 647
Target Start/End: Original strand, 36509024 - 36509158
Alignment:
Q  499 cttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaacc 598  Q
    |||| |||||||||||||||| |||||  ||||||||||||| ||||||||||||||||||          ||||  ||||||    |||||||||||||    
T  36509024 cttgggctatgtaattgggctcgtacaaatttaagtaatattgattattcttgcggtttgg----------ttcgattgctga----caaaccgcaaacc 36509109  T
Q  599 graccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
      |||||||||  ||||||| |||||||||||| |||||||||||||||    
T  36509110 aaaccgaaccgcacggttcaatgcaaaagtcatatgaattcatccgaac 36509158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 36921436 - 36921374
Alignment:
Q  350 tattaggtaaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  36921436 tattaggtaaaatttatatcaaaataggtaaaattaagaagaaacataagtatgaaacaaatt 36921374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 7760226 - 7760306
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||| || ||||||||||| | ||||  |||||||||||    
T  7760226 tatttcattaactctaatattgccgacttgttacaaaataaacatatgacattttattttgctctttacttgataaaatat 7760306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 8769033 - 8768982
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8769033 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 8768982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 10671833 - 10671884
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  10671833 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 10671884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 13852321 - 13852372
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  13852321 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 13852372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 31983070 - 31983015
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| |||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  31983070 aaaatatgcagtttggtttggttcagttgatttttaaaaagtcatccaaaccaaac 31983015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 47069681 - 47069732
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  47069681 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 47069732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 47204527 - 47204476
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  47204527 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 47204476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 47903260 - 47903311
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  47903260 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 47903311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 3213292 - 3213241
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  3213292 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaatcaaac 3213241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 7209335 - 7209288
Alignment:
Q  217 cggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  7209335 cggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 7209288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 12117612 - 12117663
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  12117612 catgcagtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 12117663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 24361568 - 24361513
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  24361568 aaaacatgtggtttggtttggttcagttgattttaaaaaaatcatccaaaccaaac 24361513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 27054802 - 27054751
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  27054802 catgcggtttggtttggttcggttgatttttaaaaagccatccaaaccaaac 27054751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 18673157 - 18673109
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacatagga 320  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  18673157 tattacattaactctaatattgacaacttgttccaaaataaacatagga 18673109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 36508460 - 36508532
Alignment:
Q  279 ttaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaata 351  Q
    |||| |||||||||||  | ||| ||||||||||||| | || |||||||||||||||||| |||||||||||    
T  36508460 ttaattctaatattgccgatttgctacaaaataaacacatgacattttattttgttgtttacatgataaaata 36508532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 43429191 - 43429239
Alignment:
Q  216 gcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  43429191 gcggtttggtttggttcggttgatttttaaaaagtcatccaaacaaaac 43429239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 10069202 - 10069257
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||    
T  10069202 aaaacatgctgtttggtttgattcggttgatttttaaaaagtcattcaaaccaaac 10069257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 1335335 - 1335381
Alignment:
Q  218 ggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  1335335 ggtttggtttggttcggttgatttttaaaaagtcctccaaaccaaac 1335381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 32823617 - 32823666
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaa 263  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  32823617 catgcggtttggtt-ggttcggttgatttttaaaaagtcatccaaaccaaa 32823666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 549 - 647
Target Start/End: Complemental strand, 31287393 - 31287295
Alignment:
Q  549 ttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||||||||| ||||||||| ||||| || | | ||  ||||||||||||| ||| |||| ||||||| |||  |||| | |||||||| |||||||||    
T  31287393 ttgcggtttgatttggtttggttcggttggtaaaattaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaaaatgatctgaatacatccgaac 31287295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 549 - 643
Target Start/End: Original strand, 40849325 - 40849419
Alignment:
Q  549 ttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||||||||||||||||||| ||||| || | | ||| ||||||||||||  ||| |||| ||||||| |||  |||||| ||| |||| |||||    
T  40849325 ttgcggtttggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatacatcc 40849419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 358 - 393
Target Start/End: Original strand, 10069784 - 10069819
Alignment:
Q  358 aaaacttatatcaaaatatgtaaaattaagaagaaa 393  Q
    |||||||||||||||||| |||||||||||||||||    
T  10069784 aaaacttatatcaaaataggtaaaattaagaagaaa 10069819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 36507971 - 36508010
Alignment:
Q  225 tttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  36507971 tttgattcggttgatttttaaaaagtcatccaaaccaaac 36508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 643
Target Start/End: Original strand, 1335884 - 1335922
Alignment:
Q  605 aaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  1335884 aaccgcgcggtttagtgcaaaagtcatctgaattcatcc 1335922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 549 - 616
Target Start/End: Complemental strand, 524484 - 524417
Alignment:
Q  549 ttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggtt 616  Q
    |||||||||||||||||||| ||||| || | | ||| ||||||||||||  ||| |||| |||||||    
T  524484 ttgcggtttggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggtt 524417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 31876700 - 31876651
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaa 262  Q
    ||||| |||| ||| ||||| |||||||||||||||||||| ||||||||    
T  31876700 catgcagtttggttcggttcggttgatttttaaaaagtcattcaaaccaa 31876651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 176; Significance: 2e-94; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 272 - 654
Target Start/End: Original strand, 10174194 - 10174588
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  10174194 tattacattaactctaatattgccaacttgttacaaaataaacatatgacattttattttgctgtttatatgataaaatattaggtaaaatttatatcaa 10174293  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt-------catcactgaaa-------atgaattgaaagagatgaaaatgaattagaatca 457  Q
    |||| ||||||||||||||||| |||| |||||||||||||         | |  ||||       || | ||||||||||||||||||||||| ||||     
T  10174294 aataggtaaaattaagaagaaacataaacatgaaacaaattattagaaagtaaaggaaacaaattcatcacttgaaagagatgaaaatgaattataatcg 10174393  T
Q  458 aatctgatggtgcaacaatggaaaaatcga---aagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcgg 554  Q
    || ||||||||||||||||| |||||||||   || |||  ||||||||| |||||||||||| ||||||||||||||||||||||||||    ||||||    
T  10174394 aacctgatggtgcaacaatgaaaaaatcgaatcaaaaga-gattcttgagttatgtaattgggatagtacatgtttaagtaatattcatt----ttgcgg 10174488  T
Q  555 tttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaa-caagtgc 653  Q
    |||||||||||||| ||||| ||||||||||||||||||||| || | | ||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  10174489 tttggtttggtttggttcggttgctgagatgcaaaccgcaaatcgaa-caaaccgcgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 10174587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 12165749 - 12165500
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaa-----aatcgaaagagattat 497  Q
    |||||||||||||||||| |||| ||| |||||||||||||| |||||| |||  || |||||||||||||||||||||     ||||||||||||||||    
T  12165749 gaaacaaattcatcactggaaataaatcgaaagagatgaaaaggaattaaaattgaacctgatggtgcaacaatggaaagatcgaatcgaaagagattat 12165650  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||| ||||||    
T  12165649 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttcgtttggttcagttgctgagatgcaaactgcaaac 12165550  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  12165549 cgaaccgaaccatgcggttcagtgcaaaagtcatccgaattcatccgaac 12165500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 2226689 - 2226440
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||| ||||||||| | ||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||     |||||||||    
T  2226689 gaaacatattcatcacaggaaatgaattgaaagagatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattat 2226590  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    || |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  2226589 tcatgagctatgtaattgggctaatacatgtttaagtaatattcattattctggcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaac 2226490  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || || |||||| |||||| ||||||||||||||| ||||||||||||||    
T  2226489 cgaactgaaccgcgcggttaagtgcaaaagtcatccgaattcatccgaac 2226440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 401 - 647
Target Start/End: Complemental strand, 36103419 - 36103168
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaaaga-----gatt 495  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||  |||||||||||||||||||||||||||  |     ||||    
T  36103419 atgaaacaaattcatcactgtaaatgaattgaaagagatggaaaggaattagaatcgaacttgatggtgcaacaatggaaaaatcgaatcaaaaacgatt 36103320  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  |||    
T  36103319 attcttgagctatgtagttgggctagtacatgttcaagtaatattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaactacaa 36103220  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||  | ||||||| |||||||||||||||||||||||||||||||||||||    
T  36103219 accaaaacgaaccgcgcggttcagtgcaaaagtcatctgaattcatccgaac 36103168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 12680881 - 12680632
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||  ||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||     |||||||||    
T  12680881 gaaacaaattcatcacttgaaatgaattgaaagagatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattat 12680782  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    | || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  12680781 ttttaagttatgtaattgggctagtacatgtttaagtaatattcatcattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaac 12680682  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |  ||| ||||| |||||||| ||||||||||||| ||||||||| ||||    
T  12680681 caaaccaaaccgcgcggttcattgcaaaagtcatccgaattcatctgaac 12680632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 9161259 - 9161506
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||  ||  |||||||||||||||||||||||||||     |||||||||    
T  9161259 gaaataaattcatcactggaaatgaattcaaagagatggaaaggaattagaattgaacttgatggtgcaacaatggaaaaatcgaatcaaaagagattat 9161358  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |  ||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||||||||    
T  9161359 ttctgagctatgt--ttgggctagtgcatatttaagtaatattcattattcttgcggttgggtttggtttggttcggttgctgagattcaaaccgcaaac 9161456  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || |||||||||  ||||||||||||||||||||||||||||||||||||    
T  9161457 cgaaccgaaccgcacggttcagtgcaaaagtcatctgaattcatccgaac 9161506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 403 - 654
Target Start/End: Complemental strand, 30265598 - 30265347
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaaa-gaga---ttatt 498  Q
    |||||||||||||||||| ||||||||||||||||||| |||  |||||||||| ||  |||||||||||||||||||||||||||  || |   |||||    
T  30265598 gaaacaaattcatcactggaaatgaattgaaagagatggaaaataattagaatcgaacttgatggtgcaacaatggaaaaatcgaattgaaagcgttatt 30265499  T
Q  499 cttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaacc 598  Q
     |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||||       
T  30265498 tttgagctatgtaattgggctagcacatgattaagtaatattcattattcttgcgatttggtttgatttggttcggttgctgagatgcaaaccgcaa--- 30265402  T
Q  599 graccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaa-caagtgcg 654  Q
      |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  30265401 --accgaaccgtacggtttagtgcaaaagtcatctgaattcatccgaatcaagtgcg 30265347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 32521026 - 32520782
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| ||||||| || ||||||||||||||||| ||||||||||     |||||||||    
T  32521026 gaaacaaattcatcacttgaaatgaattgaaagagatggaaatgaactagaatcgaacctgatggtgcaacaatgaaaaaatcgaatcaaaagagattat 32520927  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||| |  ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||     ||||| |||||||||||| | |||||||    
T  32520926 tcttaaattatgtaattgggctagtacatctttaagtaatattcatcattcttgcggtttggtttgg-----ttcggttgctgagatgcagatcgcaaac 32520832  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |  ||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  32520831 caaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatccgaac 32520782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 408 - 642
Target Start/End: Original strand, 38433967 - 38434206
Alignment:
Q  408 aaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttg 502  Q
    |||||||||| || ||||||||| || |||||||||| ||||||||||| ||  |||||||||||||||||||||||||||     |||||||||||||     
T  38433967 aaattcatcattggaaatgaattaaaggagatgaaaaagaattagaatcgaacgtgatggtgcaacaatggaaaaatcgaattaaaagagattattctta 38434066  T
Q  503 agctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgrac 602  Q
     |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |  ||    
T  38434067 ggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgctgagatacaaaccgcaaatcaaac 38434166  T
Q  603 cgaaccgtgcggttcagtgcaaaagtcatctgaattcatc 642  Q
    ||||||   |||||||||||||||||||||  ||||||||    
T  38434167 cgaacctcacggttcagtgcaaaagtcatccaaattcatc 38434206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 403 - 629
Target Start/End: Complemental strand, 333089 - 332856
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||| ||||||||||| | ||||||||||||||||||  ||| ||||||||||| ||  |||||||||||  ||||||||||||||     | |||||||    
T  333089 gaaataaattcatcacgggaaatgaattgaaagagatagaaaggaattagaatcgaacttgatggtgcaattatggaaaaatcgaatcaaaatagattat 332990  T
Q  498 tcttgagctat--gtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  332989 tcttgagctatatgtaattgggccagtacatgtttaagtaatattcattattcttgcggtttagtttggtttggttcggatgctgagatgcaaaccgcaa 332890  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtc 629  Q
    |||  ||||||| | |||||||||||||||||||    
T  332889 accaaaccgaactgcgcggttcagtgcaaaagtc 332856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 333244 - 333104
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  333244 tattacattaactctaatattgtcaacttgttacaaaataaacatatgacattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 333145  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  333144 aataggtaaaattaagaagaaacataagcatgaaacaaatt 333104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 12681036 - 12680896
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  12681036 tattacattaactctaatattgccaacttgttacaaaataaacataggatattttattttgttgtttatatgataaaatatttggtaaaacttatataaa 12680937  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  12680936 aataggtaaaattaagaagaaacataagcatgaaacaaatt 12680896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 42544775 - 42544915
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42544775 tattacattaactctaatattgccaacttgttacaaaataaacatagaacattttattttgatgtttatatgataaaatattaggtaaaacttatatcaa 42544874  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  42544875 aataggtaaaattaagaagaaatataagcatgaaataaatt 42544915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 9161104 - 9161244
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  9161104 tattacattaactctaatattgccaacttgtcacaaaataaacataggacattttattttgatgtttatatgataaaatattaggtaaaacttatatcta 9161203  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  9161204 aataggtaaaattaagaagaaacataagcatgaaacaaatt 9161244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 36177061 - 36176921
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  36177061 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgctgtttatatgataaaatatcaggtaaaacttatatcaa 36176962  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||  ||||||||||||||||||||||||||||||| ||||    
T  36176961 aattggtaaaattaagaagaaatataagcatgaaactaatt 36176921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 482 - 647
Target Start/End: Complemental strand, 36176611 - 36176446
Alignment:
Q  482 aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctga 581  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||| ||||||    
T  36176611 aatcaaaagagatttttcttgagctatgtaattgggctagtacacgtttaagtaatagtcattattcttgcggtttggtttgatttggttcggttgctga 36176512  T
Q  582 gatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||||||||||||||||   ||||||| ||||||| ||||||||||||||| |||||||| |||||    
T  36176511 gatgcaaaccgcaaaccaacccgaaccatgcggtttagtgcaaaagtcatccgaattcattcgaac 36176446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 32521181 - 32521041
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  32521181 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgttgtttatatgataaaatattaggtaaaacttgtataaa 32521082  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||  ||| ||||||||||||| ||||||||||||||||||    
T  32521081 aatcggtataattaagaagaaacataagcatgaaacaaatt 32521041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 36176906 - 36176677
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaaagagattattcttg 502  Q
    ||||||||||||||| || |||||||| |||||||||| ||| ||||||||||  || |||||||||||||| ||               ||| ||||||    
T  36176906 gaaacaaattcatcattggaaatgaatcgaaagagatggaaaggaattagaattgaacctgatggtgcaacagtg---------------atttttcttg 36176822  T
Q  503 agctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgrac 602  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||   |    
T  36176821 agctatgtaattgggctagtacacgtttaagtaatagtcattattcttgcggtttggtttgatttggttcggttgctgagatgcaaaccgcaaaccaacc 36176722  T
Q  603 cgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||||| ||||||| ||||||||||||||| |||||||| |||||    
T  36176721 cgaaccatgcggtttagtgcaaaagtcatccgaattcattcgaac 36176677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 273 - 412
Target Start/End: Complemental strand, 30265754 - 30265613
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 372  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30265754 attacattaactctaatattgccaacttattacaaaataaacataggacattttattttgctgtttatatgataaaatattaggtaaaacttatatcaaa 30265655  T
Q  373 atatgtaaaattaagaagaaatata--agcatgaaacaaatt 412  Q
    ||| ||||||||||||||||| |||  |||||||||||||||    
T  30265654 ataggtaaaattaagaagaaacataagagcatgaaacaaatt 30265613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 280 - 412
Target Start/End: Original strand, 23780863 - 23780995
Alignment:
Q  280 taactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaaatatgta 379  Q
    |||||| |||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  23780863 taactcaaatattgccaacttgttaccaaataaacataggacattttattttgatgtttatatgataaaatattaggtaaaacttatatcaaaataggta 23780962  T
Q  380 aaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||||| ||||||||||||||||||    
T  23780963 aaattaagaagaaacataagcatgaaacaaatt 23780995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 280 - 412
Target Start/End: Original strand, 23867816 - 23867948
Alignment:
Q  280 taactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaaatatgta 379  Q
    |||||| |||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  23867816 taactcaaatattgccaacttgttaccaaataaacataggacattttattttgatgtttatatgataaaatattaggtaaaacttatatcaaaataggta 23867915  T
Q  380 aaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||||| ||||||||||||||||||    
T  23867916 aaattaagaagaaacataagcatgaaacaaatt 23867948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 36103572 - 36103432
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  36103572 tattacattaactctaatattgccaacttgttacaaaataaacatataatattttattttgctgtttatatgataatatattaggtaaaacttatatcaa 36103473  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| |||||||| |||||||||    
T  36103472 aataggtaaaattaagaagaaacataagcatcaaacaaatt 36103432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 2226844 - 2226704
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| || ||||||    
T  2226844 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgatgtttatatgataaaatattagataaaatttctatcaa 2226745  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| |||||||||||||||||  ||| |||||||||||||    
T  2226744 aataggtaaaattaagaagaaacttaatcatgaaacaaatt 2226704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 272 - 409
Target Start/End: Complemental strand, 12166129 - 12165992
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  12166129 tattacattaactctaacattgtcaacttgttacaaaataaacatatgacattttattttgctgtttatatgataaaatattaggcaaaacttatatcaa 12166030  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaa 409  Q
    ||||  |||||||||||||||| |||||||||||||||    
T  12166029 aatagataaaattaagaagaaacataagcatgaaacaa 12165992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 403 - 540
Target Start/End: Original strand, 35893262 - 35893405
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagat-gaaaatgaattagaatcaaatctgatggtgcaacaatggaa-----aaatcgaaagagatta 496  Q
    |||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||| |   |||||||||||||||| ||     ||||||||||||||||    
T  35893262 gaaacaaattcatcactggaaatgaattgaaaaagatggaaaaggaattagaatcgagcgtgatggtgcaacaatgaaaaaatcaaatcgaaagagatta 35893361  T
Q  497 ttcttgagctatgtaattgggctagtacatgtttaagtaatatt 540  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  35893362 ttcttgagctatgtaattgggctagtacatgtttaagtaatatt 35893405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 403 - 646
Target Start/End: Complemental strand, 17084681 - 17084444
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||||||||  |||||| ||||||||||  || |||| || ||  ||||||||||| |||||||||||||||     | |||||||    
T  17084681 gaaacaaattcatcactgaaaattgattgaaggagatgaaaaacaaatagattcgaacttgatggtgcaataatggaaaaatcgaatcaaaatagattat 17084582  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    | |||   |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||          ||||| ||||||||||||||| | |||     
T  17084581 ttttggattatgtaattgggttagtacaagtttaagtaatattgattattcttgcggtttgg----------ttcggttgctgagatgcaaactggaaat 17084492  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaa 646  Q
    || ||||||  | |||||||| ||||| |||||||||||||||||||||    
T  17084491 cgaaccgaa-tgcgcggttcaatgcaacagtcatctgaattcatccgaa 17084444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 666992 - 666889
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  666992 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 666893  T
Q  644 gaac 647  Q
    ||||    
T  666892 gaac 666889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 27885807 - 27885704
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  27885807 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 27885708  T
Q  644 gaac 647  Q
    ||||    
T  27885707 gaac 27885704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 701566 - 701669
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| |||  ||||||||||  || ||||||    
T  701566 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggtttagtctaaaagtcatccaaactcatcc 701665  T
Q  644 gaac 647  Q
    ||||    
T  701666 gaac 701669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 8409335 - 8409438
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||| ||||||  |||||||||| ||| ||||||    
T  8409335 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcgattcagtctaaaagtcatccgaactcatcc 8409434  T
Q  644 gaac 647  Q
    ||||    
T  8409435 gaac 8409438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 38334475 - 38334372
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  38334475 tatttttgcggtttggtttagtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 38334376  T
Q  644 gaac 647  Q
    ||||    
T  38334375 gaac 38334372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 403 - 552
Target Start/End: Original strand, 42544930 - 42545086
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaat--tgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaa-----atcgaaagagatt 495  Q
    |||||||||||||||||| ||||||||  ||||||||||| ||| |||||| ||||||  || |||||||||||||| | ||     ||| ||  |||||    
T  42544930 gaaacaaattcatcactggaaatgaatattgaaagagatggaaaagaattaaaatcaagccttatggtgcaacaatgaacaagttgaatcaaattagatt 42545029  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgc 552  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  42545030 attcttgagctatgttattgggctattacatatttaagtaatattcattattcttgc 42545086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 35359058 - 35359138
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  35359058 tattacattaactctaatattgccaacttgttacaacataaacataggacattttattttgttgtttacatgataaaatat 35359138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 562 - 647
Target Start/End: Original strand, 42545822 - 42545907
Alignment:
Q  562 tggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    ||||||| ||||| || ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  42545822 tggtttggttcggttgttgagatgcaaaccgcaaaccgaaccgaaccgcgcggtttagtgcaaaagtcatctgaattcatccgaac 42545907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 544 - 643
Target Start/End: Original strand, 11917804 - 11917903
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| |||||| |||  |||||||||| ||| ||||||    
T  11917804 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggtttagtctaaaagtcatccgaactcatcc 11917903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 15068825 - 15068928
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| || || || ||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  15068825 tatttttgcggtttggtttggtttggtttggttgttgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 15068924  T
Q  644 gaac 647  Q
    ||||    
T  15068925 gaac 15068928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 30002347 - 30002450
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||| ||||||||||||| ||||||||| ||||||||||  |||| ||||| ||| ||||||    
T  30002347 tatttttgcggtttggtttggtttggttcggttgctgagatgtaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaaatcatccgaactcatcc 30002446  T
Q  644 gaac 647  Q
    ||||    
T  30002447 gaac 30002450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 422 - 645
Target Start/End: Original strand, 23781024 - 23781228
Alignment:
Q  422 aaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgg 516  Q
    ||||||||||||||||||| ||| ||||||||||| || | |||||| |||||||||||||||| ||     ||||||||||||||||||| ||||||||    
T  23781024 aaatgaattgaaagagatggaaaggaattagaatcgaacccgatggtacaacaatggaaaaatcaaatcaaaagagattattcttgagctaagtaattgg 23781123  T
Q  517 gctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggtt 616  Q
    |                 ||||||||||||| |||||||||||||||| ||| ||| | |||||||||       |||||||| ||||||||| || |||    
T  23781124 g-----------------aatattcattatttttgcggtttggtttggcttggttcagttgctgagat-------gcaaaccgaaccgaaccgcgcagtt 23781199  T
Q  617 cagtgcaaaagtcatctgaattcatccga 645  Q
    |||||||||||||||||||| ||||||||    
T  23781200 cagtgcaaaagtcatctgaaatcatccga 23781228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 422 - 645
Target Start/End: Original strand, 23867977 - 23868181
Alignment:
Q  422 aaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgg 516  Q
    ||||||||||||||||||| ||| ||||||||||| || | |||||| |||||||||||||||| ||     ||||||||||||||||||| ||||||||    
T  23867977 aaatgaattgaaagagatggaaaggaattagaatcgaacccgatggtacaacaatggaaaaatcaaatcaaaagagattattcttgagctaagtaattgg 23868076  T
Q  517 gctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggtt 616  Q
    |                 ||||||||||||| |||||||||||||||| ||| ||| | |||||||||       |||||||| ||||||||| || |||    
T  23868077 g-----------------aatattcattatttttgcggtttggtttggcttggttcagttgctgagat-------gcaaaccgaaccgaaccgcgcagtt 23868152  T
Q  617 cagtgcaaaagtcatctgaattcatccga 645  Q
    |||||||||||||||||||| ||||||||    
T  23868153 cagtgcaaaagtcatctgaaatcatccga 23868181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 401 - 488
Target Start/End: Complemental strand, 38334772 - 38334685
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa 488  Q
    ||||||||||||||||| || |||||||||||| |||||| ||| ||||||||||| || |||||| ||||||||||| |||||||||    
T  38334772 atgaaacaaattcatcattggaaatgaattgaaggagatggaaaggaattagaatcgaacctgatgatgcaacaatgggaaaatcgaa 38334685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 403 - 484
Target Start/End: Complemental strand, 9988695 - 9988614
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaat 484  Q
    |||||||||||||||||  |||||||||||| |||||||||| |||||| |||| ||||||||||||||| |||| ||||||    
T  9988695 gaaacaaattcatcactagaaatgaattgaaggagatgaaaaggaattaaaatcgaatctgatggtgcaagaatgaaaaaat 9988614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 36103685 - 36103630
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36103685 aaaatatgcggtttggtttggttcagttgatttttaaaaagtcatccaaaccaaac 36103630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 9988817 - 9988769
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacatagga 320  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9988817 tattacattaactctaatattgccaacttgttacaaaataaacatagga 9988769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 38433820 - 38433868
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacatagga 320  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38433820 tattacattaactctaatattgccaacttgttacaaaataaacatagga 38433868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 667688 - 667633
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  667688 aaaacatacggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 667633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 11917418 - 11917469
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11917418 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 11917469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 27886486 - 27886435
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27886486 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 27886435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 38433710 - 38433761
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  38433710 catgcggtttagtttggttcggttgatttttaaaaagtcctccaaaccaaac 38433761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 17085196 - 17085123
Alignment:
Q  279 ttaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||||||||  |||| |||||||||||||| | || |||||||||||||||||| || |||||||||    
T  17085196 ttaactctaatattgccgacttcttacaaaataaacacaagacattttattttgttgtttacatcataaaatat 17085123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 38008714 - 38008866
Alignment:
Q  25 ttttaatttcattaaatcacctacaaacaaaatgaaatgaatggttgacaaaatcaa---aaggcaataaacaaatccaata---ttaaaccaacaatga 118  Q
    |||||||||||||||||||||| |||||||||  |||||||| ||  | |||| |||   || | || || |||||| ||||   |||||||||||||||    
T  38008714 ttttaatttcattaaatcacctgcaaacaaaagaaaatgaattgtgtataaaaacaagtcaaagaaaaaatcaaatcaaataatattaaaccaacaatga 38008813  T
Q  119 agccgttacaaaacatactctcctatatatttctcatttcattggagttcatt 171  Q
    |||  || |||||||||  |||||||||||| |||||||||||| | ||||||    
T  38008814 agctatttcaaaacataacctcctatatattcctcatttcattgcaattcatt 38008866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 12166234 - 12166183
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  12166234 catgcagtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 12166183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 15068473 - 15068524
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  15068473 catgcgatttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 15068524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 30002024 - 30002075
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  30002024 catgcggtttggtttggttcggttgttttttaaaaagtcatccaaaccaaac 30002075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 30265865 - 30265810
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||| |||||||||    
T  30265865 aaaacatgcagtttggtttggttcggttgatttttaaaaagtcatcaaaaccaaac 30265810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 35358949 - 35359000
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  35358949 catgcggtttggtttggttcggttgatatttaaaaagtcatccaaaccaaac 35359000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 36177175 - 36177124
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  36177175 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaacaaaac 36177124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 42544671 - 42544722
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  42544671 catgcggtttggtttggttcggttgatttttaagaagtcatccaaaccaaac 42544722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 8409004 - 8409054
Alignment:
Q  214 atgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  8409004 atgcggtttggtttggttcggttgatttttaaaaagtcacccaaaccaaac 8409054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 9161001 - 9161047
Alignment:
Q  218 ggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  9161001 ggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 9161047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 38433893 - 38433947
Alignment:
Q  358 aaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||| ||||||| ||||||||||||||||| |||||| |||||||||||    
T  38433893 aaaacttataacaaaataggtaaaattaagaagaaacataagcgtgaaacaaatt 38433947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 701228 - 701284
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttt-taaaaagtcatccaaaccaaac 264  Q
    |||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  701228 aaaacatgtggtttggtttggttcggttgattttttaaaaagtcatccaaaccaaac 701284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 38334837 - 38334785
Alignment:
Q  360 aacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  38334837 aacttatattaaaataggtaaaattaagaagaaacataagcatgaatcaaatt 38334785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 17085307 - 17085256
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| ||||||||||||| |||||||||||||||||||||| || |||||    
T  17085307 catgcgatttagtttggttcggttgatttttaaaaagtcatcccaatcaaac 17085256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 2226949 - 2226903
Alignment:
Q  218 ggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  2226949 ggtttggtttggttcggttgatttttaaaaactcatccaaaccaaac 2226903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 358 - 412
Target Start/End: Complemental strand, 17084750 - 17084696
Alignment:
Q  358 aaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||||||||| ||||||||| ||||||| |||||| ||||| |||||    
T  17084750 aaaacttatatcaaaataggtaaaattaggaagaaacataagcgtgaaataaatt 17084696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 32521287 - 32521241
Alignment:
Q  218 ggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||    
T  32521287 ggtttaatttggttcggttgatttttaaaaattcatccaaaccaaac 32521241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 647
Target Start/End: Original strand, 35893442 - 35893540
Alignment:
Q  542 attattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcat 641  Q
    |||||||||||||||||||||||||||| | |  || ||||||||||| ||        |||| |||| ||| |||||| ||||||||||| ||||||||    
T  35893442 attattcttgcggtttggtttggtttgacttgattgttgagatgcaaatcg-------aaccggaccgcgcgattcagtacaaaagtcatccgaattcat 35893534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 333336 - 333296
Alignment:
Q  224 gtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  333336 gtttggttcgattgatttttaaaaagtcatccaaaccaaac 333296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 12681128 - 12681088
Alignment:
Q  224 gtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  12681128 gtttggttcggttgatttttaaaaattcatccaaaccaaac 12681088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 10174098 - 10174149
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| |||| |||  ||||||||||||||||| |||||||||||||    
T  10174098 catgcggtttggtttcgtttggttgatttttaaaaagttatccaaaccaaac 10174149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 513 - 568
Target Start/End: Complemental strand, 9988593 - 9988541
Alignment:
Q  513 ttgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttg 568  Q
    ||||||||||||| |||||| ||||||| ||||   ||||||||||||||||||||    
T  9988593 ttgggctagtacaagtttaaataatattgatta---ttgcggtttggtttggtttg 9988541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 170; Significance: 9e-91; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 401 - 654
Target Start/End: Complemental strand, 25298064 - 25297805
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagatt 495  Q
    |||||||||||||||||||| |||| |||||||||||||| |||  |||||||||| || ||||||||||||||||||||||||||||     || ||||    
T  25298064 atgaaacaaattcatcactggaaataaattgaaagagatggaaagaaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagcgatt 25297965  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||    
T  25297964 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccacaa 25297865  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaa-caagtgcg 654  Q
    |||  ||||||||||||||||||  |||||||||||| ||||||||||||| ||||||||    
T  25297864 accaaaccgaaccgtgcggttcaaagcaaaagtcatccgaattcatccgaatcaagtgcg 25297805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 11376163 - 11376407
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||     || ||||||    
T  11376163 gaaacaaattcatcactggaaatgaattgaaagagatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagcgattat 11376262  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||||     ||||||| ||| | ||||||||||||||| ||||||    
T  11376263 tcttgggctatgcaattgagctagtacatgtttaagtaatattcagtattcttgcggtt-----tggtttggttcagttgctgagatgcaaactgcaaac 11376357  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||    
T  11376358 cgaaccgaaccgcgcggttcagtgcaaaagtcatctgaattcatccgaac 11376407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 44979581 - 44979332
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||  || || |||||||||||||||||||||||||     |||||||||    
T  44979581 gaaacaaattcatcactggaaatgaattaaaagagatggaaaggaattagaattgaacctcatggtgcaacaatggaaaaatcgaatcaaaagagattat 44979482  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    || || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  44979481 tcctgggctatgtaattgggctagtacatgtttaagtaacattcattattcttgcggtttggtttggtttggttcggtagctgagatgcaaaccgcaaac 44979382  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |  | | ||||| |||||||||||||||| ||||| ||||||||||||||    
T  44979381 caaatcaaaccgcgcggttcagtgcaaaattcatccgaattcatccgaac 44979332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 403 - 632
Target Start/End: Original strand, 44035586 - 44035820
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||  |||| ||||||||||| ||||||||||     |||||||||    
T  44035586 gaaacaaattcatcactggaaatgaattgaaagagatggaaaggaattagaatcgaacttgatcgtgcaacaatgaaaaaatcgaatcaaaagagattat 44035685  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  44035686 tcttgagttatgtaactgagctagtacatgtttaagtaatattcattatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgtaaac 44035785  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    |  ||||||||| ||||||||||||||||||||||    
T  44035786 caaaccgaaccgcgcggttcagtgcaaaagtcatc 44035820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 404 - 609
Target Start/End: Complemental strand, 17916665 - 17916453
Alignment:
Q  404 aaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaa--tctgatggtgcaacaatggaaaaa-----tcgaaagagatta 496  Q
    ||||||||||||||||| ||||||||||||||||||| ||| |||||| |||| ||  ||||||||||||| ||||||||||     || ||||||||||    
T  17916665 aaacaaattcatcactggaaatgaattgaaagagatggaaaggaattataatcgaacctctgatggtgcaataatggaaaaaatgaatcaaaagagatta 17916566  T
Q  497 ttcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaa 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||| ||||    
T  17916565 ttcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttggctcggttgctgagatgcaaaccacaaa 17916466  T
Q  597 ccgraccgaaccg 609  Q
    ||  |||||||||    
T  17916465 ccaaaccgaaccg 17916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 34910586 - 34910835
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||| ||||||||||||| ||| ||||||| ||||||||||| ||  |||||||||||||||||||||||||||     ||| |||||    
T  34910586 gaaacaaattcatcacagaaaatgaattgagagaaatgaaaacgaattagaatcgaacttgatggtgcaacaatggaaaaatcgaatcaaaagatattat 34910685  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccg----- 592  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||     ||| |||| |||| |||||||         
T  34910686 tcttgggctatgtaattgggttagtacatgtttaagtaatattcattattcttgcggtttggtttgttt-----cggttgctcagattcaaaccgtaaac 34910780  T
Q  593 caaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    ||||||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  34910781 caaaccgaaccgaaacgcgcggtttattgcaaaagtcatctgaattcatccgaac 34910835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 19936926 - 19936682
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||| ||||| |||||||||||| |||||| |||  |||||||||| ||  |||||||||||||||| ||||||||||     | | |||||    
T  19936926 gaaacaaattcagcactggaaatgaattgaatgagatggaaagaaattagaatcgaacatgatggtgcaacaatgaaaaaatcgaatcaaaatatattat 19936827  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||     |||||||| ||||| ||||||    
T  19936826 tcttgagctatgtatttgagctagtacatgtataagtaatattcattattcttgcggtttggtttggtttggtt-----gctgagatacaaactgcaaac 19936732  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || ||||||||| || |||||||| ||||| |||||||||||||||||||    
T  19936731 cgaaccgaaccgcgcagttcagtgaaaaagacatctgaattcatccgaac 19936682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 19937081 - 19936941
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19937081 tattacattaactctaatattgccaacttgttacaaaataaacataagacattttattttgttgtttatatgataaaatattaggtaaaatttatatcaa 19936982  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  19936981 aataagtaaaattaagaagaaacataagcatgaaacaaatt 19936941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 273 - 412
Target Start/End: Original strand, 34910431 - 34910570
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 372  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34910431 attacattaactctaatattgccaatttgttacaaaataaacataggacattttattttgttgtttatatgataaaatattagataaaacttatatcaaa 34910530  T
Q  373 atatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||| ||||||||||||||||| ||||||||||||||||||    
T  34910531 ataggtaaaattaagaagaaacataagcatgaaacaaatt 34910570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 272 - 410
Target Start/End: Original strand, 44035431 - 44035569
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44035431 tattacattaactctaatattgccaacttgttacaaaataatcgtaggacattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 44035530  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaa 410  Q
    |||| ||||||||||||||||| ||||||| ||||||||    
T  44035531 aataggtaaaattaagaagaaacataagcaagaaacaaa 44035569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 17916821 - 17916681
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17916821 tattacgttaactctaatgttgccaacttgttacaaaataaacataggacattttattatgttgtttatatgataaaatattaggtaaaatttatatcaa 17916722  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  17916721 aataggtaaaattaagaagaaacataagcatgaaacaaatt 17916681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 44979736 - 44979596
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44979736 tattacattaactctaatattgccaacttattacaaaataaacatagggcattttattttgttgtttatatgataaaatattaggtaaaacttatattaa 44979637  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||| ||||||    
T  44979636 aataggtaaaattaagaagaaacataagcatgaagcaaatt 44979596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 447 - 647
Target Start/End: Original strand, 18360121 - 18360326
Alignment:
Q  447 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 541  Q
    |||||||||| ||  |||||||||||||||||||||||||||     |||||||||| | | |||||||||||||||||||||| ||||||||||||||     
T  18360121 aattagaatcgaacatgatggtgcaacaatggaaaaatcgaatcaaaagagattattttcgggctatgtaattgggctagtacaagtttaagtaatattg 18360220  T
Q  542 attattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcat 641  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||| | |||||  ||||||||| | |||||| ||||||||||||  ||||| ||    
T  18360221 attattcttgcggtttggtttggtttggttcggttgctgagatgcaaactgtaaaccaaaccgaaccgcgtggttcaatgcaaaagtcattcgaatttat 18360320  T
Q  642 ccgaac 647  Q
    ||||||    
T  18360321 ccgaac 18360326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 25298217 - 25298077
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| ||    
T  25298217 tattacattaactctaatattgccaacttgttgcaaaataaacataggatattttattttgttgtttatatgataatatattaggtagaacttatattaa 25298118  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| |||||||||||||||   ||||||||||||||||||    
T  25298117 aataggtaaaattaagaagaggcataagcatgaaacaaatt 25298077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 272 - 375
Target Start/End: Original strand, 11376018 - 11376121
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    |||| |||||||||||||||||  |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11376018 tatttcattaactctaatattgtcaacttgttacaaaataaacataagacattttattttgatgtttatatgataaaatattaggtaaaacttatatcaa 11376117  T
Q  372 aata 375  Q
    ||||    
T  11376118 aata 11376121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 9811739 - 9811842
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  9811739 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 9811838  T
Q  644 gaac 647  Q
    ||||    
T  9811839 gaac 9811842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 20420777 - 20420880
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  20420777 tatttttgcggtttggtttggtttggttcgattgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 20420876  T
Q  644 gaac 647  Q
    ||||    
T  20420877 gaac 20420880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 36413021 - 36412918
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||  |||||||||||||||||||||||| |||||||||  |||||||||  |||||||||| ||| ||||||    
T  36413021 tatttttgcggtttggtttggtttggttcgattgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatcc 36412922  T
Q  644 gaac 647  Q
    ||||    
T  36412921 gaac 36412918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 401 - 488
Target Start/End: Original strand, 20420474 - 20420561
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa 488  Q
    ||||||||||||||||| || |||||||||||| |||||| ||| |||||||||||||| |||||| |||||||||||||||||||||    
T  20420474 atgaaacaaattcatcattggaaatgaattgaaggagatggaaaggaattagaatcaaacctgatgatgcaacaatggaaaaatcgaa 20420561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 557 - 647
Target Start/End: Original strand, 16579002 - 16579092
Alignment:
Q  557 tggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||||||||||| ||| | |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||||||    
T  16579002 tggtttggtttggttcagttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaac 16579092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 18357021 - 18357101
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||| | |||| ||||||||||||    
T  18357021 tattacattaactctaatattgccaacttgttacaaaataaacataagacattttattttgctttttacatgataaaatat 18357101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 543 - 632
Target Start/End: Complemental strand, 42785191 - 42785102
Alignment:
Q  543 ttattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||  ||||||||| | |||||| |||||||||||||    
T  42785191 ttattcttacggtttggtttggtttggttcggtttctgagatgcaaaccgcaaaccaaaccgaaccgcgtggttcaatgcaaaagtcatc 42785102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 42785590 - 42785510
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||||||||||||||| || || |||||||||||||||| || |||||||||||||||||| || |||||||||    
T  42785590 tattacattaactctaatattgccaaattattacaaaataaacatatgacattttattttgttgtttacataataaaatat 42785510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 9811399 - 9811454
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  9811399 aaaacatgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 9811454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 17916925 - 17916872
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaa 262  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  17916925 aaaacatgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaa 17916872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 11375910 - 11375965
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  11375910 aaaacatgcagtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 11375965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 36413710 - 36413659
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  36413710 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 36413659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 44035319 - 44035370
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  44035319 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 44035370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 44979839 - 44979788
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  44979839 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 44979788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 16578648 - 16578699
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||||||||    
T  16578648 catgcggtttggtttggttcgattgatttttaaaaagtcatccaaaccaaac 16578699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 25298325 - 25298270
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||    
T  25298325 aaaacattcggttcggtttggttcggttgatttttaaaaagtcatccaaaccaaac 25298270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 18357478 - 18357532
Alignment:
Q  358 aaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  18357478 aaaatttatataaaaataggtaaaattaagaagaaacataagcatgaaacaaatt 18357532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 20420409 - 20420461
Alignment:
Q  360 aacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  20420409 aacttatattaaaataggtaaaattaagaagaaacataagcatgaatcaaatt 20420461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 553 - 643
Target Start/End: Original strand, 41166625 - 41166715
Alignment:
Q  553 ggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||||||||||||||| ||||| || | | ||| ||||||||||||  | | |||| ||||||| |||| |||||| |||||||| |||||    
T  41166625 ggtttggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaatcaaaccatgcggttgagtgaaaaagtgatctgaatgcatcc 41166715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 549 - 619
Target Start/End: Original strand, 44085956 - 44086026
Alignment:
Q  549 ttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcag 619  Q
    |||||||||||||||||||| ||||| || ||| ||| ||||| ||||||  ||| |||| ||||||||||    
T  44085956 ttgcggtttggtttggtttggttcggttggtgaaatgaaaaccacaaaccaaaccaaaccatgcggttcag 44086026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 19937198 - 19937144
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||| ||||| |||||||||  |||||||||||||||||||||||| |||||    
T  19937198 aaaacatg-ggtttggtttggttcgattgatttttaaaaagtcatccaaatcaaac 19937144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 42785698 - 42785648
Alignment:
Q  214 atgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||| |||||||||  |||||||||||||| |||| ||||||||||    
T  42785698 atgcggtttggtttggttcgcttgatttttaaaaactcattcaaaccaaac 42785648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 3e-87; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 36827598 - 36827349
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaat-----cgaaagagattat 497  Q
    ||||||||||||||  || |||| |||||||||||||| |||  |||||||||| || ||||||||||||||||||||||||     ||||||||||||     
T  36827598 gaaacaaattcatcggtggaaataaattgaaagagatggaaagaaattagaatcgaacctgatggtgcaacaatggaaaaattgaatcgaaagagattaa 36827499  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36827498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttggttcggctgctgagatgcaaaccgcaaac 36827399  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || ||| ||||||| |||||||||||||||||||  ||||||| ||||||    
T  36827398 cgaaccaaaccgtgtggttcagtgcaaaagtcattcgaattcagccgaac 36827349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 14549505 - 14549749
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    ||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||| || |||||||| ||||||||||||| |||||     |||||||||    
T  14549505 gaaacaaattcatcactgaaaattaattgaaagagatggaaaggaaatagaatcgaacctgatggtacaacaatggaaaattcgaatcaaaagagattat 14549604  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     ||||| ||||||||||||||||||||||    
T  14549605 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttacggtttggtttgg-----ttcggatgctgagatgcaaaccgcaaac 14549699  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  14549700 cgaaccgaaccgcgcggttcagtgcaaaagtcatccgaattcatccgaac 14549749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 18169832 - 18169589
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||     |||||||||    
T  18169832 gaaacaaattcatcactggaaatgaattgaaagagatggaaaggaattagaatcaaacctgatggtgcaataatggaaaaatcgaatcgatagagattat 18169733  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||     ||||||||| ||||||||||||||||||    
T  18169732 tcttgaggtatgtaattgggctagtacatgtttaagtaatattcattattcttgcagtttgatttgg-----ttcggctgccgagatgcaaaccgcaaac 18169638  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |  ||||||||  |||||||||||||||||| ||| ||| ||||||||||    
T  18169637 caaaccgaaccacgcggttcagtgcaaaagtaatccgaa-tcatccgaac 18169589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 18633398 - 18633155
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||     |||||||||    
T  18633398 gaaacaaattcatcactggaaatgaattgaaagagatggaaaggaattagaatcaaacctgatggtgcaataatggaaaaatcgaatcgatagagattat 18633299  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||     ||||||||| ||||||||||||||||||    
T  18633298 tcttgaggtatgtaattgggctagtacatgtttaagtaatattcattattcttgcagtttgatttgg-----ttcggctgccgagatgcaaaccgcaaac 18633204  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |  ||||||||  |||||||||||||||||| ||| ||| ||||||||||    
T  18633203 caaaccgaaccacgcggttcagtgcaaaagtaatccgaa-tcatccgaac 18633155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 403 - 643
Target Start/End: Original strand, 30392356 - 30392601
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||| || || ||||| ||||||||||||||||     |||||||||    
T  30392356 gaaacaaattcatcactggaaatgaattaaaagagatggaaaggaattagaatcaaacctcatagtgcagcaatggaaaaatcgaatcaaaagagattat 30392455  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||    
T  30392456 tgttgggctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaac 30392555  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
     | ||| ||||| ||||||||||  |||||||||| ||||||||||    
T  30392556 tgaaccaaaccgcgcggttcagtaaaaaagtcatccgaattcatcc 30392601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 10661270 - 10661410
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661270 tattacattaactgtaatattgccaacttgttacaaaataaacataggacattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 10661369  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  10661370 aataggtaaaattaagaagaaacataagcatgaaacaaatt 10661410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 403 - 636
Target Start/End: Original strand, 10661425 - 10661662
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    ||||||||||| |||||| |||||||||||||||| || ||||||||||||||| ||  ||||||| |||||||| ||||||||||     | |||| ||    
T  10661425 gaaacaaattcttcactggaaatgaattgaaagagttggaaatgaattagaatcgaacatgatggtacaacaatgaaaaaatcgaatcaaaaaagataat 10661524  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||  || || |||||||||||||| |||||||    
T  10661525 tcttgagctatgtaatcgggctagtacatgtttaagatatattcattatccttgcggtttggtttggtttagtttggttgctgagatgcaaa-cgcaaac 10661623  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaa 636  Q
    |  ||| ||||| | ||||||||||||||||||||||||    
T  10661624 caaaccaaaccgcgtggttcagtgcaaaagtcatctgaa 10661662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 506 - 647
Target Start/End: Original strand, 44673109 - 44673250
Alignment:
Q  506 tatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccga 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||  |||||    
T  44673109 tatgtaattgggctagtacatgtttaagtaatattcattattcttgcagtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccga 44673208  T
Q  606 accgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  44673209 accgcgcggttcagtgcaaaagtcatccgaattcatccgaac 44673250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 36910138 - 36909905
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcg----aaagagattatt 498  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |    ||| ||||||||    
T  36910138 gaaataaattcatcaccgaaaatgaattgaaagagatggaaatgaattagaatcaaacctgatggtgcaacaatggaaaaatggaatcaaaaagattatt 36910039  T
Q  499 cttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaacc 598  Q
    ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||| |||     ||||| | |||||||||||||||||||||    
T  36910038 cttgagc-atgtaattgggctagtacat---------atattcattattcttgcggtttggtatgg-----ttcggttcctgagatgcaaaccgcaaacc 36909954  T
Q  599 graccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    | ||||||||| || ||||| |||||||||| ||| |||||||||||||    
T  36909953 gaaccgaaccgcgcagttcaatgcaaaagtcgtctaaattcatccgaac 36909905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 36827753 - 36827613
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  36827753 tattacattaactctaatattgccaacttgctacaaaataaacataggacattttattttgttgtttatatgataaaatattgtgtaaaacttatatcaa 36827654  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  36827653 aataggtaaaattaagaagaaacataagcatgaaacaaatt 36827613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 403 - 643
Target Start/End: Original strand, 33068869 - 33069109
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||| |||||||||||||||||||||||||| || ||||||| ||||||||||| ||| |||||||||||||||||||||||| ||     |||||||||    
T  33068869 gaaataaattcatcactgaaaatgaattgaaggaaatgaaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcaaatcaaaagagattat 33068968  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||| |||||||||||||| |||||  ||||||||||||| |||||| ||| |||||||||| ||||| ||||| |||| ||||||||||||||||     
T  33068969 tcttgagttatgtaattgggctggtacaaatttaagtaatattgattatttttgtggtttggtttcgtttggttcggttgctaagatgcaaaccgcaaat 33069068  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |  ||||   |||  |||||||||||||||||||| ||| ||||||    
T  33069069 caaaccg---cgt--ggttcagtgcaaaagtcatccgaaatcatcc 33069109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 272 - 409
Target Start/End: Original strand, 14549349 - 14549486
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  14549349 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgttgtttatatgataaaatattatgtaaaacttatattaa 14549448  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaa 409  Q
    |||| ||||||||||||||||| ||||| |||||||||    
T  14549449 aataggtaaaattaagaagaaacataagaatgaaacaa 14549486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 30392202 - 30392342
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30392202 tattacattaactctaatattgccaacttgttacaaaataaacatagagcattttattttgttgtttatatgataaaatattatgtaaaacttatatcaa 30392301  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  30392302 aataggtaaaattaagaagaatcataagcatgaaacaaatt 30392342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 468 - 647
Target Start/End: Complemental strand, 6200677 - 6200493
Alignment:
Q  468 tgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 562  Q
    |||||||||||||||||||||     |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6200677 tgcaacaatggaaaaatcgaatcaaaagagattattcttgggttatgtaattgggctagtacatgtttcagtaatattcattattcttgcggtttggttt 6200578  T
Q  563 ggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||||| || || |||| |||||||||||  |||||| ||  |||||  || |||||||||||||||||| ||||||||||||||    
T  6200577 ggtttggtttggttgctaagatgcaaaccaaaaaccgaacgaaaccgcacgattcagtgcaaaagtcatccgaattcatccgaac 6200493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 272 - 409
Target Start/End: Complemental strand, 6200808 - 6200670
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatc-a 370  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |    
T  6200808 tattacattaactctaatattgccaacttgtttcaaaataaacataggacatttcgttttgttgtttatatgataaaatattaggtaaaacttatatcaa 6200709  T
Q  371 aaatatgtaaaattaagaagaaatataagcatgaaacaa 409  Q
    ||||| ||||||||||||||||| ||||||||| |||||    
T  6200708 aaataggtaaaattaagaagaaacataagcatgcaacaa 6200670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 273 - 409
Target Start/End: Original strand, 3682042 - 3682178
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 372  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  3682042 attacattaactttaatattgtcaacttgttacaaaataaacatagaacattttattttgctgtttatatgataaaatattaggtaaaacttataacaaa 3682141  T
Q  373 atatgtaaaattaagaagaaatataagcatgaaacaa 409  Q
    ||| ||||||||||||||||| |||| ||||||||||    
T  3682142 ataggtaaaattaagaagaaacataaacatgaaacaa 3682178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 401 - 641
Target Start/End: Original strand, 3682194 - 3682433
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagatt 495  Q
    ||||||||||||| ||| || || |||||||||| |||||  ||  |||||||||  || ||||||||| || ||||||||||| |||     |||||||    
T  3682194 atgaaacaaattcgtcagtggaa-tgaattgaaatagatggtaagaaattagaattgaacctgatggtggaaaaatggaaaaattgaatcaaaagagatt 3682292  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     ||||| ||||||||||||||||||||    
T  3682293 attcttaggttatgtaattgggctagtacatgtttaggtaatattcattattcttgcggtttggtttgg-----ttcggttgctgagatgcaaaccgcaa 3682387  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcat 641  Q
    |||  ||| ||||| ||||||||||| |||||||||| || |||||    
T  3682388 accaaaccaaaccgcgcggttcagtggaaaagtcatccgatttcat 3682433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 273 - 412
Target Start/End: Complemental strand, 18169983 - 18169847
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 372  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||| || ||||||| ||| | ||||||||||||||||   ||||||||||||||||||    
T  18169983 attacattaactctaatgttgcctacttgttacaaaataaacataagacattttatattgctatttatatgataaaata---ggtaaaacttatatcaaa 18169887  T
Q  373 atatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||| |||||||||| |||||| ||||||||||||||||||    
T  18169886 ataggtaaaattaaaaagaaacataagcatgaaacaaatt 18169847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 273 - 412
Target Start/End: Complemental strand, 18633549 - 18633413
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 372  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||| || ||||||| ||| | ||||||||||||||||   ||||||||||||||||||    
T  18633549 attacattaactctaatgttgcctacttgttacaaaataaacataagacattttatattgctatttatatgataaaata---ggtaaaacttatatcaaa 18633453  T
Q  373 atatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||| |||||||||| |||||| ||||||||||||||||||    
T  18633452 ataggtaaaattaaaaagaaacataagcatgaaacaaatt 18633413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 36910297 - 36910153
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaat----tttattttgttgtttatatgataaaatattaggtaaaacttata 367  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||| | |      ||||||||| |||||||||||| |||||||| ||||||| ||||    
T  36910297 tattacattaactctaatattgccaacttgttacaaaatagacatacgtatgaccatttattttgctgtttatatgatcaaatattatgtaaaacatata 36910198  T
Q  368 tcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  36910197 tcaaaatatgtaaaattaagaagaaacataatcatgaaacaaatt 36910153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 44672905 - 44673033
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| || ||||||            |||||||| ||||||| |||||||||||||||    
T  44672905 tattacattaactctaatattgccaacttgttgcaaaataaacataagatatttta------------tatgataatatattagataaaacttatatcaa 44672992  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| |||||| |||||||||||    
T  44672993 aataggtaaaattaagaagaaacataagcctgaaacaaatt 44673033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 558 - 647
Target Start/End: Complemental strand, 5802602 - 5802513
Alignment:
Q  558 ggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    ||||||||||| || || |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||| ||||||||||    
T  5802602 ggtttggtttggtttggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatctgaactcatccgaac 5802513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 36910401 - 36910350
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36910401 catgcggtttagtttggttcggttgatttttaaaaagtcatccaaaccaaac 36910350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 33068278 - 33068328
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaa 263  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33068278 catgcggtttggtttggttcagttgatttttaaaaagtcatccaaaccaaa 33068328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 6200927 - 6200878
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaa 258  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6200927 aaaacatgcggtttagtttggttaagttgatttttaaaaagtcatccaaa 6200878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 33068379 - 33068459
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||||||||||||||| ||||| |||||| ||||| ||| || ||||||||||| |||| | ||||||||||||    
T  33068379 tattacattaactctaatattgccaacttattacaagataaaaatatgacattttattttgctgttaacatgataaaatat 33068459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 3006642 - 3006591
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  3006642 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 3006591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 5803316 - 5803265
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5803316 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 5803265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 10661166 - 10661217
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  10661166 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 10661217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 44672797 - 44672852
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||    
T  44672797 aaaacatgcggtttggtttggttcgattgatttttaaaaagtcatccaaaccaaac 44672852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 3006283 - 3006194
Alignment:
Q  553 ggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||||||||||||||| ||||| ||||||||||||||||||||     ||||||||| ||||||||||  |||||| ||| ||| ||||||||||    
T  3006283 ggtttggtttggtttggttcggttgctgagatgcaaaccgcaa-----accgaaccgcgcggttcagtctaaaagtaatccgaactcatccgaac 3006194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 14549232 - 14549287
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  14549232 aaaatatgcggtttggtttgattcggttgatttttaaaaagtcatccaaaccaaac 14549287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 646
Target Start/End: Complemental strand, 42496565 - 42496458
Alignment:
Q  534 taatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatct 633  Q
    ||||||||||||||||||||||||| ||||||| ||||     | | ||||  ||| | |||| || |||||||||||||||||||||||||| ||||      
T  42496565 taatattcattattcttgcggtttgatttggttcgatt-----gttaagatataaatcacaaatcgaaccgaaccgtgcggttcagtgcaaaaatcattc 42496471  T
Q  634 gaattcatccgaa 646  Q
     ||||||||||||    
T  42496470 aaattcatccgaa 42496458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 28073265 - 28073227
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaa 247  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  28073265 aaaacatgtggtttagtttggttcagttgacttttaaaa 28073227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 3e-87; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 6004199 - 6003950
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||  || ||||||||||||||||||||||||||||     |||||||||    
T  6004199 gaaacaaattcatcactggaaatgaattaaaagagatggaaaggaattagaattgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattat 6004100  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  6004099 tcttgggctatgtaattgggctagtacatgtttaagtaacattcattattcttgcggtttggtttggtttggttcggtagctgagatgcaaaccgcaaac 6004000  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || ||| ||||  |||||||||||||||||||||| ||||||||||||||    
T  6003999 cgaaccaaacctcgcggttcagtgcaaaagtcatccgaattcatccgaac 6003950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 422 - 647
Target Start/End: Complemental strand, 35531944 - 35531719
Alignment:
Q  422 aaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaaaga-----gattattcttgagctatgtaattgg 516  Q
    ||||||||||||||||||| ||| ||||||||||| ||  |||||||||||||||||||||||||||  |     |||||||||||||||||| ||||||    
T  35531944 aaatgaattgaaagagatggaaaggaattagaatcgaacatgatggtgcaacaatggaaaaatcgaataaaaaacgattattcttgagctatgcaattgg 35531845  T
Q  517 gctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggtt 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     ||||| ||||||||||||||| ||||| || || |||||||||||||    
T  35531844 gctagtacatgtttaagtaatattcattattcttgcggtttggtttgg-----ttcggttgctgagatgcaaactgcaaatcgaactgaaccgtgcggtt 35531750  T
Q  617 cagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||||||||||||| ||||||||||||||||    
T  35531749 cagtgcaaaagtcacctgaattcatccgaac 35531719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 21586652 - 21586409
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||| | ||||||||||||||||||| ||| ||||||||||| || || |||||||||||||||||||||||||     ||| |||||    
T  21586652 gaaacaaattcatcaccggaaatgaattgaaagagatggaaaggaattagaatcgaacctcatggtgcaacaatggaaaaatcgaatcgaaagatattat 21586553  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||||||| ||||||    
T  21586552 tcttgaactatgtaatttggctagtacatgtttaagtaatattcattattcttgcgatttggtt-ggtttggttcggttgctgagatgcaaactgcaaac 21586454  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    ||     ||||| |||||| |||||||||||||||  |||||||||||||    
T  21586453 cg-----aaccgcgcggtttagtgcaaaagtcatccaaattcatccgaac 21586409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 422 - 632
Target Start/End: Original strand, 32880602 - 32880812
Alignment:
Q  422 aaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaat-----cgaaagagattattcttgagctatgtaattgg 516  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||     ||||||||||||  ||||||||||||||||||    
T  32880602 aaatgaattgaaagagatggaaaggaattagaatcaaacctgatggtgcaacaatggaaaaatcaaatcgaaagagattaaacttgagctatgtaattgg 32880701  T
Q  517 gctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggtt 616  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||     ||||| ||||||||||||||||| |||||  ||||||| | ||||||    
T  32880702 actagtacatgtttaagtaatattcatttttcttgcggtttggtttgg-----ttcggttgctgagatgcaaaccgtaaaccaaaccgaactgcgcggtt 32880796  T
Q  617 cagtgcaaaagtcatc 632  Q
    ||||||||||||||||    
T  32880797 cagtgcaaaagtcatc 32880812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 401 - 562
Target Start/End: Complemental strand, 50562389 - 50562223
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagatt 495  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||     |||||||    
T  50562389 atgaaacaaattcatcactgaaaataaattgaaagagatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcgaaagagatt 50562290  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 562  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50562289 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttggggtttggttt 50562223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 6004354 - 6004214
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6004354 tattacattaactctaatattgccaacttattacaaaataaacatagggcattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 6004255  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  6004254 aataggtaaaattaagaagaaatataagcatgaaacaaatt 6004214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 273 - 412
Target Start/End: Complemental strand, 21586807 - 21586667
Alignment:
Q  273 attacattaactctaa-tattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21586807 attacattaactctaaatattgccaacttgttacaaaataaacataggacattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 21586708  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  21586707 aataggtaaaattaagaagaaacataagcatgaaacaaatt 21586667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 509 - 647
Target Start/End: Complemental strand, 48032836 - 48032698
Alignment:
Q  509 gtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaacc 608  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  48032836 gtaattgggctagtacatgtttaagtaatattcatgattcttgcggtttggtttggtttggttcggctgctgagatgcaaaccgcaaaccaaaccgaacc 48032737  T
Q  609 gtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    | |||||||| ||||||||||||| ||||||||| ||||    
T  48032736 gcgcggttcattgcaaaagtcatccgaattcatctgaac 48032698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 276 - 412
Target Start/End: Complemental strand, 27642125 - 27641989
Alignment:
Q  276 acattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaaata 375  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27642125 acattaactctaatattgtcaacttgttacaaaatagacataggacattttattttgctgtttatatgataaaatattaggtaaaacttatatcaaaata 27642026  T
Q  376 tgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
     ||||||| ||||||||| ||||||||||||||||||    
T  27642025 ggtaaaatcaagaagaaacataagcatgaaacaaatt 27641989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 32880418 - 32880558
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  32880418 tattacattaactctaatattgtcaacttgttataaaataaacataggacattttattttgctgtttatataataaaatattaggtaaaacttatatcaa 32880517  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||| |||||| |||||    
T  32880518 aataggtaaaattaagaagaaacataagaatgaaagaaatt 32880558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 276 - 412
Target Start/End: Original strand, 33002643 - 33002779
Alignment:
Q  276 acattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaaata 375  Q
    ||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  33002643 acattaactctaatattgtcaacttgttacaaaataaacacaggatattttattttgttgtttatatgatcaaatattaggtaacacttatatcaaaata 33002742  T
Q  376 tgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
     ||||| ||||||||||| ||||||||||||||||||    
T  33002743 ggtaaagttaagaagaaacataagcatgaaacaaatt 33002779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 35532118 - 35531978
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    |||| |||||||||||||||||| ||||| |||||||||||||||| || ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  35532118 tatttcattaactctaatattgccaacttattacaaaataaacataagacattttattttgatgtttatatgataaaatatttggtaaaacttatatcaa 35532019  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||| ||| ||||||||||||||||||    
T  35532018 aataggtaaaattaagaaaaaagataagcatgaaacaaatt 35531978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 39098060 - 39098200
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||| ||||| ||| ||||  |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  39098060 tattacaataactttaacattggcaacttgttacaaaataaacatatgacattttattttgttgtttatataataaaatattaggtaaaacttatattaa 39098159  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| |||||||||||||||||||||||||| |||||||||    
T  39098160 aataggtaaaattaagaagaaatataagcatcaaacaaatt 39098200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 43030547 - 43030689
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaatttt--attttgttgtttatatgataaaatattaggtaaaacttatatc 369  Q
    |||||||||||||  |||||||| || ||||||||||||||||||| || |||||  ||||||||||||||||||||||||||||||||||| ||||||     
T  43030547 tattacattaactacaatattgccaatttgttacaaaataaacataagacattttttattttgttgtttatatgataaaatattaggtaaaatttatatt 43030646  T
Q  370 aaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  43030647 aaaataggtaaaattaagaagaaacataagcatgaaacaaatt 43030689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 403 - 573
Target Start/End: Original strand, 33002794 - 33002969
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    ||||||||| | |||| | |||| |||||||||||||| ||| || |||||||| || ||||||||||||||||||||||||||||     |||||||||    
T  33002794 gaaacaaatacttcacaggaaataaattgaaagagatggaaaggagttagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattat 33002893  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcg 573  Q
    | ||||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||||| ||||| ||||    
T  33002894 tattgagctatgtaattggactggtacatatttaagaaatattcattattcttgcggtttggtttagtttggttcg 33002969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 50562536 - 50562402
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||| |||||||||||      || |||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  50562536 tattacattaactctaatattgccaacttattacaaaataa------gacattttattttgttgtttatacgataaaatattaggtaaaacttatattaa 50562443  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||  |||||||||||||||| ||||||||||||||||||    
T  50562442 aatagataaaattaagaagaaacataagcatgaaacaaatt 50562402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 422 - 561
Target Start/End: Original strand, 39098234 - 39098378
Alignment:
Q  422 aaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcga-----aagagattattcttgagctatgtaattgg 516  Q
    ||||||||||||||||||| |||  ||||||||||||  ||||||||||||||||| |||||||||     || |||||||||||||||||| ||||||     
T  39098234 aaatgaattgaaagagatggaaagaaattagaatcaatcctgatggtgcaacaatgaaaaaatcgattcaaaaaagattattcttgagctatttaattgt 39098333  T
Q  517 gctagtacatgtttaagtaatattcattattcttgcggtttggtt 561  Q
    | |||||||||||||||||||||||||||||||||||||| ||||    
T  39098334 gttagtacatgtttaagtaatattcattattcttgcggttcggtt 39098378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 408 - 604
Target Start/End: Original strand, 43030708 - 43030895
Alignment:
Q  408 aaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttg 502  Q
    ||||||||||||| | ||||||||||||||||| ||| ||||||||||| ||  |||||||||||||||||||||||||||     | ||||||||||||    
T  43030708 aaattcatcactggagatgaattgaaagagatggaaaggaattagaatcgaacttgatggtgcaacaatggaaaaatcgaatcgaaaaagattattcttg 43030807  T
Q  503 agctatgtaattgggctagtacatgtttaagtaatattcattattcttgcgg-tttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgra 601  Q
    |||||||||||| ||||||               |||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |    
T  43030808 agctatgtaatttggctag---------------tattcattattcttgcggttttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaa 43030892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 10369610 - 10369713
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||||||||||    
T  10369610 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaattcatcc 10369709  T
Q  644 gaac 647  Q
    ||||    
T  10369710 gaac 10369713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 35401894 - 35401791
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  35401894 tatttttgcggtttggtttggtttggttcgattgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 35401795  T
Q  644 gaac 647  Q
    ||||    
T  35401794 gaac 35401791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 51149392 - 51149289
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| || || ||||||||||||||||| |||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  51149392 tatttttgcggtttggtttggtttggttaggttgctgagatgcaaaccgtaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 51149293  T
Q  644 gaac 647  Q
    ||||    
T  51149292 gaac 51149289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 9827745 - 9827666
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  9827745 attacattaactctaatattgcgaacttgatacaaaataaacataggacattttattttgttgtttacatgatataatat 9827666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 544 - 632
Target Start/End: Original strand, 34794923 - 34795011
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||  |||||||||  ||||||||||    
T  34794923 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatc 34795011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 4669317 - 4669214
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| ||||||||| |||||||||| || || |||||||||||||| ||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  4669317 tatttttgcggtttagtttggtttggtttggttgctgagatgcaaatcgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 4669218  T
Q  644 gaac 647  Q
    ||||    
T  4669217 gaac 4669214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 403 - 488
Target Start/End: Complemental strand, 27641974 - 27641889
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa 488  Q
    |||| ||||||||||||||||||||||||||||||||| | | |||||||| || || |||||||||| |||||||||||||||||    
T  27641974 gaaataaattcatcactgaaaatgaattgaaagagatggagaggaattagattcgaacctgatggtgctacaatggaaaaatcgaa 27641889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 33361312 - 33361415
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||| | ||||| |||||||||||||||||||||| | ||  ||||| ||||||||||  |||||||||| ||| ||||||    
T  33361312 tatttttgcggtttggtttggttcggttcggttgctgagatgcaaaccgcaaactgaactaaaccgcgcggttcagtctaaaagtcatccgaactcatcc 33361411  T
Q  644 gaac 647  Q
    ||||    
T  33361412 gaac 33361415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 542 - 647
Target Start/End: Complemental strand, 27641879 - 27641779
Alignment:
Q  542 attattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcat 641  Q
    ||||||||||||||||||||||||||  |      ||||||||||||||||||||||  | | ||||  |||||||||||||||||||||||||||||||    
T  27641879 attattcttgcggtttggtttggtttagtg-----gctgagatgcaaaccgcaaaccaaatcaaaccacgcggttcagtgcaaaagtcatctgaattcat 27641785  T
Q  642 ccgaac 647  Q
    ||||||    
T  27641784 ccgaac 27641779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 35402279 - 35402224
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  35402279 aaaacatgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 35402224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 6004457 - 6004406
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  6004457 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 6004406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 33360968 - 33361017
Alignment:
Q  215 tgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  33360968 tgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 33361017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 39097957 - 39098010
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaa 262  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  39097957 aaaacatgcggtttgatttggttcagttgatttttaaaaagtcgtccaaaccaa 39098010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 4669717 - 4669666
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  4669717 catgcggtttggtttggttcggttgatttttaaaaagtcatccgaaccaaac 4669666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 10369220 - 10369275
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  10369220 aaaacatgcggtttggttcggttcgtttgatttttaaaaagtcatccaaaccaaac 10369275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 21586913 - 21586862
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||| |||| ||||| |||||||||||||||||||||||||||||||||||    
T  21586913 catgcagtttggtttgattcagttgatttttaaaaagtcatccaaaccaaac 21586862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 34794607 - 34794658
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  34794607 catgcgatttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 34794658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 51149727 - 51149676
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  51149727 catgcggtttggtttggttcggttgatttttaaaaagtgatccaaaccaaac 51149676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 43030430 - 43030480
Alignment:
Q  214 atgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||| ||||    
T  43030430 atgcagtttggtttggttcggttgatttttaaaaagtcatccaaactaaac 43030480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 9827836 - 9827797
Alignment:
Q  225 tttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  9827836 tttggttaggttgatttttaaaaagtcatccaaaccaaac 9827797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 32880325 - 32880364
Alignment:
Q  225 tttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  32880325 tttggttcggttgatttttaaaaagtcatacaaaccaaac 32880364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 646
Target Start/End: Complemental strand, 42362835 - 42362738
Alignment:
Q  549 ttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaa 646  Q
    |||||||||||||||||||||||| | || | | ||| ||||||||||||  ||| |||| ||||||| |||  |||| | |||||| | ||||||||    
T  42362835 ttgcggtttggtttggtttgattcagttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaaatgatctgattgcatccgaa 42362738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 48032918 - 48032868
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||| ||||| ||||||||||||||| |||||||||||||||    
T  48032918 catgcggtttggtt-ggttcggttgatttttaaaaattcatccaaaccaaac 48032868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 164; Significance: 3e-87; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 39256441 - 39256192
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    ||||||||||||||| || ||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||     | |||||||    
T  39256441 gaaacaaattcatcattggaaatgaattgaaagagatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcgaaaaagattat 39256342  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  39256341 tcgtgagctatgtaatttggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaac 39256242  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || ||| ||||| || |||||||||||||||||||  |||||||||||||    
T  39256241 cgaaccaaaccgcgcagttcagtgcaaaagtcatccaaattcatccgaac 39256192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 24910859 - 24910610
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||  ||||||||||| ||||||| |||  |||||||||| || |||||||||||||||| |||||||||||     |||||||||    
T  24910859 gaaacaaattcatcactcgaaatgaattgagagagatggaaagaaattagaatcgaacctgatggtgcaacaattgaaaaatcgaatcgaaagagattat 24910760  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||    
T  24910759 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttccggtttggtttggtttggttcggttgctgagatgcaaaccacaaac 24910660  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
     | ||||||| |  ||||||| ||||||||||||| ||||||||||||||    
T  24910659 tgaaccgaactgcacggttcaatgcaaaagtcatccgaattcatccgaac 24910610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 33910582 - 33910333
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||  ||||||||||||||||||| ||| ||||||||||| || |||||||||||||| |||||||||||||     |||||||||    
T  33910582 gaaacaaattcatcacttgaaatgaattgaaagagatggaaaagaattagaatcgaacctgatggtgcaacattggaaaaatcgaatcaaaagagattat 33910483  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |  | ||||||||||||||||||||    
T  33910482 tcttaagttatgtaattgggctagtacatatttaagtaatattcattattcttgcggtttggtttggtttggtttgattactgagatgcaaaccgcaaac 33910383  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |  ||||||||| ||||||||||||||||||||||  |||||||||||||    
T  33910382 caaaccgaaccgcgcggttcagtgcaaaagtcatccaaattcatccgaac 33910333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 403 - 632
Target Start/End: Original strand, 33474718 - 33474952
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| || ||||||  ||||||||| ||||||| ||     |||||||||    
T  33474718 gaaacaaattcatcactggaaatgaattgaaagagatggaaaggaattagaatcgaacctgatgacgcaacaatgaaaaaatcaaatcaaaagagattat 33474817  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||| || ||||||||||| | |||||    
T  33474818 tcttgagctatgtaattgggctagtacatatttaagtaatattcgttattcttgcagtttggtttggtttggttcggttgatgagatgcaaatcacaaac 33474917  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    || ||||||||| ||||||||||||||||||||||    
T  33474918 cgaaccgaaccgcgcggttcagtgcaaaagtcatc 33474952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 408 - 647
Target Start/End: Original strand, 45692078 - 45692317
Alignment:
Q  408 aaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttg 502  Q
    ||||||||| ||| ||||||||||||||||||| ||| ||||||||||| || || |||||||||||||| |||||| |||     ||||||||||||||    
T  45692078 aaattcatctctgtaaatgaattgaaagagatggaaaggaattagaatcgaacctaatggtgcaacaatgaaaaaattgaatcaaaagagattattcttg 45692177  T
Q  503 agctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgrac 602  Q
    || ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||||     ||| |||||||||||||||||||||||| ||    
T  45692178 agttatgtaattggactagtacatatttaagtaatatttattattcttgcggtttgttttggtt-----cggttgctgagatgcaaaccgcaaaccgaac 45692272  T
Q  603 cgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  45692273 cgaaccgtgcggttcagtgcaaaagtcatccaaattcatccgaac 45692317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 403 - 632
Target Start/End: Original strand, 32954356 - 32954585
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    ||||||||||||||||||||||||||||||||||| || |||  |||||||||  || ||||||||||||||||||||||||||||     ||| |||||    
T  32954356 gaaacaaattcatcactgaaaatgaattgaaagagttggaaagtaattagaattgaacctgatggtgcaacaatggaaaaatcgaatcgaaagaaattat 32954455  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||     | |||||||||||| ||||| |||||||||||||||||| |||    
T  32954456 tcttgagctatgtaattgggcttgtacatgtttaagtaatattcattattct-----tatggtttggtttggttcggttgctgagatgcaaaccgcgaac 32954550  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    || || ||||||||||||| |||||||||||||||    
T  32954551 cgaacggaaccgtgcggtttagtgcaaaagtcatc 32954585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 16529297 - 16529048
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||| ||| ||| ||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||| |||| |||||     |||||||||    
T  16529297 gaaacaaattgatccctggaaatgaattgaaagagatggaaaggaattagaatcgaacctgatggtgcaacaatgaaaaattcgaatcaaaagagattat 16529198  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||||||||||||||||| ||    
T  16529197 tcttgggctatgtaattgggctattacatgtttaagtaatattcactattcttgcggtttggtttggtttggtttggttgctgagatgcaaaccgcatac 16529098  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
       ||||||| | || |||||||||||||| |||| |||||||| |||||    
T  16529097 taaaccgaactgcgctgttcagtgcaaaagccatccgaattcatacgaac 16529048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 401 - 647
Target Start/End: Complemental strand, 51252228 - 51251987
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagatt 495  Q
    |||||||||||| || |||| ||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||||||||     |||||||    
T  51252228 atgaaacaaatttataactggaaatgaattgaaagagatggaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagatt 51252129  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||          ||||||||||||||||||||    
T  51252128 attatttggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcgggttggtttggt----------tgctgagatgcaaaccgcaa 51252039  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||  ||||||| | |||||||| ||||||||||||| ||||||||||||||    
T  51252038 accaaaccgaactgcgcggttcattgcaaaagtcatccgaattcatccgaac 51251987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 44918663 - 44918803
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  44918663 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgttgttcatatgataaaatattaggtaaaaattatatcaa 44918762  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  44918763 aataggtaaaattaagaagaaatataagcatgaaacaaatt 44918803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 462 - 646
Target Start/End: Original strand, 11899375 - 11899564
Alignment:
Q  462 tgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtt 556  Q
    |||||||||||||||||||||||| ||     | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  11899375 tgatggtgcaacaatggaaaaatcaaatcaaaaaagattattcttgagctatgtaattgagctagtacatatttaagtaatattcattattcttgcggtt 11899474  T
Q  557 tggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaa 646  Q
    |||||||||||||||||| ||||||||||||||||||||| |  ||| ||| ||  | || |||||||||||||||||||||||||||||    
T  11899475 tggtttggtttgattcggttgctgagatgcaaaccgcaaatcaaaccaaactgtatgttttagtgcaaaagtcatctgaattcatccgaa 11899564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 24911014 - 24910874
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  24911014 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttactgtttatatgataaaatattaggtaaaacttatatcaa 24910915  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| |||| |||||||||||| ||||||||||||||||||    
T  24910914 aataggtaatattaagaagaaacataagcatgaaacaaatt 24910874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 45691918 - 45692058
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45691918 tattacattaactctaatattggcaacttgttacaaaataaacataggacattttattttgatgtttatatgataaaatattaggtaaaacttatatcaa 45692017  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||| ||||||    
T  45692018 aataggtaaaattaagaagaaacataagcatgaagcaaatt 45692058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 273 - 412
Target Start/End: Original strand, 33474564 - 33474703
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 372  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  33474564 attacattaactctaatattgccaacttgttacaaaataaacatagaacattttattttgatgtttatatgataaaatattagataaaacttatatcaaa 33474663  T
Q  373 atatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||| ||||||||||||||||| ||||||||||||||||||    
T  33474664 ataagtaaaattaagaagaaacataagcatgaaacaaatt 33474703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 1160823 - 1160590
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaat-----cgaaagagattat 497  Q
    |||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||  | |||||| |||||||||||||||||     ||||| |||||||    
T  1160823 gaaacaaaatcatcactggaaatgaattgaaagagatggaaaggaattagaatcgtacctgatgttgcaacaatggaaaaattgaatcgaaaaagattat 1160724  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||| ||||||||               |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||     
T  1160723 tcttgagctatgtaatttggctagta---------------ttcattattcttgcggtttggtttggtttggttcggttgctgagatgcaa-ccgcaaat 1160640  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || |||||| ||||||||||||||||||||||||||||||||||| ||||    
T  1160639 cgaaccgaatcgtgcggttcagtgcaaaagtcatctgaattcatctgaac 1160590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 29389154 - 29389294
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||  ||||||||||| || |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  29389154 tattacattagttctaatattgccaaattgttacaaaataaacataggacattttattttgatgtttatatgataaaatatgaggtaaaacttatatcaa 29389253  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  29389254 aataggtaaaattaagaagaaatataagcatgaaacaaatt 29389294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 51252381 - 51252241
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||||| ||||    
T  51252381 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgttgttttcatgataaaatattaggtgaaacttatgtcaa 51252282  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  51252281 aataagtaaaattaagaagaaacataagcatgaaacaaatt 51252241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 39256597 - 39256456
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatat-gataaaatattaggtaaaacttatatca 370  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  39256597 tattacattaactctaatattgccaacttgttaccaaataaacttaggacattttattttgttgtttatattgataaagtattaggtaaaacttatatca 39256498  T
Q  371 aaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  39256497 aaataggtaaaattaagaagaaacataagcatgaaacaaatt 39256456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 276 - 412
Target Start/End: Complemental strand, 16529451 - 16529312
Alignment:
Q  276 acattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaaata 375  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  16529451 acattaactctaatattgtcaacttgttacaaaataaacataggacattttactttgttgtttatatgataaaatattagataaaacttatatcataata 16529352  T
Q  376 tgtaaaattaag---aagaaatataagcatgaaacaaatt 412  Q
     |||||||||||   |||||| ||||||||||||||||||    
T  16529351 ggtaaaattaagaaaaagaaacataagcatgaaacaaatt 16529312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 403 - 643
Target Start/End: Original strand, 44918818 - 44919048
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||| ||||||| |||||||| |||||||||| ||| ||||||||||| ||  |||||| ||||||||||||||||| ||     | |||||||    
T  44918818 gaaacaaattaatcactggaaatgaatcgaaagagatggaaaagaattagaatcgaacttgatggagcaacaatggaaaaatcaaatcaaaaaagattat 44918917  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||               ||| ||||||||||||||||||    
T  44918918 tcttgagctatgtaattggactagtacatgtttaagtaatattcattattcttgcggtctggt---------------tgcagagatgcaaaccgcaaac 44919002  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |  ||| ||||| || ||||||||||||||| ||| ||||||||||    
T  44919003 caaaccaaaccgcgcagttcagtgcaaaagttatccgaattcatcc 44919048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 33910737 - 33910597
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||  ||    
T  33910737 tattacattaaccctattattgccaacttgttacaaaataaacataggacattttattttgctgtttaaatgataaaatattaggtaaaatttatacaaa 33910638  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||  ||||||||||||||||| ||||||||||||||||||    
T  33910637 aattggtaaaattaagaagaaacataagcatgaaacaaatt 33910597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 11899135 - 11899277
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgt-tgtttatatgataaaatattaggtaaaacttatatca 370  Q
    ||||||||||||||||||||| | || |||||||||||||||||||| |  |||| || | | | |||||||||||||||||||||||||||| ||||||    
T  11899135 tattacattaactctaatatttccaaattgttacaaaataaacatagaacgtttttttatttatttttatatgataaaatattaggtaaaactcatatca 11899234  T
Q  371 aaatatgtaaaattaagaagaa-atataagcatgaaacaaatt 412  Q
    ||||| ||||||||||||||||  |||||||||||||||||||    
T  11899235 aaataggtaaaattaagaagaatttataagcatgaaacaaatt 11899277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 491 - 642
Target Start/End: Complemental strand, 6722529 - 6722384
Alignment:
Q  491 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaac 590  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||     ||||| |||||||||||||||    
T  6722529 agattattcttgagctatgtaattgggtcagtacatgtttaagtaatattcatta-tcttgcggtttggtttgg-----ttcggttgctgagatgcaaac 6722436  T
Q  591 cgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatc 642  Q
    |||||| || | |||||||    ||||| |||||||||||||  ||||||||    
T  6722435 cgcaaatcgaatcgaaccgcaaagttcaatgcaaaagtcatccaaattcatc 6722384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 32954170 - 32954261
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaactt 364  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  32954170 tattacattaactctaatattgccaacttgttacaaa-taaacataggacattttattttgttgtttatatgataacatattaggtaaaactt 32954261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 272 - 363
Target Start/End: Complemental strand, 1161709 - 1161618
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaact 363  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  1161709 tattacattaactctaatattgccaacttattacaaaataaacatatgacattttattttgctgtttatatgataaaatattaggtaaaact 1161618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 5155057 - 5154969
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  5155057 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtctaaaagtcatc 5154969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 544 - 632
Target Start/End: Original strand, 8211639 - 8211727
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  ||||||||||    
T  8211639 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatc 8211727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 32954275 - 32954341
Alignment:
Q  346 aaaatattaggtaaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  32954275 aaaatattaggtaaaacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaatt 32954341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 29707801 - 29707703
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||||||||     ||||||||||||||||||||  |||||||||| ||| ||||||    
T  29707801 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaa-----accgaaccgtgcggttcagtctaaaagtcatccgaactcatcc 29707707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 544 - 632
Target Start/End: Original strand, 20494094 - 20494182
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||| ||||| || ||||||||| ||||||||||  ||||||||||    
T  20494094 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaacagcaaatcgaaccgaaccgcgcggttcagtctaaaagtcatc 20494182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 403 - 514
Target Start/End: Original strand, 29389309 - 29389425
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcg-----aaagagattat 497  Q
    ||||||| |||||| ||| |||||| |||||||||||| | | ||||||||||| || ||||||||||||||||||||||||||     |||||||||||    
T  29389309 gaaacaagttcatccctggaaatgagttgaaagagatggagaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaattaaaagagattat 29389408  T
Q  498 tcttgagctatgtaatt 514  Q
    ||||||| | |||||||    
T  29389409 tcttgagttgtgtaatt 29389425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 353 - 412
Target Start/End: Complemental strand, 1160897 - 1160838
Alignment:
Q  353 taggtaaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  1160897 taggtaaaacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaatt 1160838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 20493757 - 20493812
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  20493757 aaaacatgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 20493812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 579 - 632
Target Start/End: Original strand, 29390137 - 29390190
Alignment:
Q  579 tgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  29390137 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatc 29390190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 39256706 - 39256655
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39256706 catgcggtttagtttggttcggttgatttttaaaaagtcatccaaaccaaac 39256655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 8211291 - 8211342
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8211291 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 8211342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 32954050 - 32954101
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  32954050 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 32954101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 33474460 - 33474511
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  33474460 catgcggtttagtttggttcggttgattttaaaaaagtcatccaaaccaaac 33474511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 42789574 - 42789495
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||| || ||||||||||  |||||  ||||||||||||    
T  42789574 attacatcaactctaatattgccgacttgttacaaaataaacatacgatattttattttaatgtttgcatgataaaatat 42789495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 45691806 - 45691861
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  45691806 aaaacatgcggtttggtttggttcggttgatttttaaaaagtcatccaaactaaac 45691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 42789668 - 42789628
Alignment:
Q  223 agtttggttcagttgatttttaaaaagtcatccaaaccaaa 263  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42789668 agtttggttcagttgatttttaaaaagtcatccaaaccaaa 42789628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 5155413 - 5155362
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  5155413 catgcgatttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 5155362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 1161812 - 1161761
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| ||||| ||||||||  |||||||||||||||||||||||||||||||    
T  1161812 catgtggtttggtttggtttggttgatttttaaaaagtcatccaaaccaaac 1161761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 16529570 - 16529519
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||| |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  16529570 catgccgtttggtttggttcggttgatttttaaaaagtcattcaaaccaaac 16529519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 51252485 - 51252435
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaa 263  Q
    |||| ||||| ||||||||  ||||||||||||||||||||||||||||||    
T  51252485 catgtggtttggtttggttgggttgatttttaaaaagtcatccaaaccaaa 51252435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 11899029 - 11899069
Alignment:
Q  224 gtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  11899029 gtttggttcggttgatttttaaaaaatcatccaaaccaaac 11899069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 44918566 - 44918606
Alignment:
Q  224 gtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||| |||||||||||||||||||||||||| ||||    
T  44918566 gtttggttcggttgatttttaaaaagtcatccaaacgaaac 44918606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 29389045 - 29389096
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||||  |||||||   ||||||||||||||||||||||||||||||    
T  29389045 catgcggtttgatttggtttgattgatttttaaaaagtcatccaaaccaaac 29389096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 8e-85; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 272 - 632
Target Start/End: Original strand, 10590970 - 10591349
Alignment:
Q  272 tattacattaactctaatattgctaacttgt-tacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatca 370  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||| || ||||||||||  ||||||| | |||||||||||||||||||||||||||    
T  10590970 tattacattaactctaatattgccaacttatatacaaaataaacatatgacattttattttactgtttatttaataaaatattaggtaaaacttatatca 10591069  T
Q  371 aaatatgtaaaattaagaagaaatataagcatgaaacaaattcatc-------actgaaa---atgaat---tgaaagagatgaaaatgaattagaatca 457  Q
    ||||| |||||||||||||||||  ||| |||||||||||||  |        |  ||||   || |||   ||||||||||| |||||||||||||||     
T  10591070 aaataggtaaaattaagaagaaacgtaaacatgaaacaaattattgggaagtaaaagaaacaaattaatcactgaaagagatggaaatgaattagaatcg 10591169  T
Q  458 aatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgc 552  Q
    || |||||||| |||||||| ||||||||||     ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10591170 aacctgatggtacaacaatgaaaaaatcgaatcgaaagacattattcttgagctatgtaattgggctattacatgtttaagtaatattcattattcttgc 10591269  T
Q  553 ggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    ||||  |||||||||| ||| | || ||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  10591270 ggttcagtttggtttggttctgttgttgagacgcaaaccgcaaaccgaatcgaaccgcgcggttcagtgcaaaagtcatc 10591349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 35039744 - 35039495
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||  ||| |||||||||||||||||||||||||||     |||||||||    
T  35039744 gaaacaaattcatcactggaaatgaattaaaagagatggaaaggaattagaattgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattat 35039645  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || || || |||||||||||||||||||    
T  35039644 tcttgggctatgtaattgggctagtacatgtttaagtaacattcattattcttgcggtttggtttggtttggtttggttgttgagatgcaaaccgcaaac 35039545  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || ||| ||||| ||||||||| |||||||||||| ||||||||||||||    
T  35039544 cgaaccaaaccgcgcggttcagcgcaaaagtcatccgaattcatccgaac 35039495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 403 - 636
Target Start/End: Original strand, 33550600 - 33550838
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||  ||||||||| ||||||||  ||| ||||||||||| || ||||||||||||||||||||||||||||     |||||||||    
T  33550600 gaaacaaattcatcactagaaatgaattaaaagagatcgaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattat 33550699  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  33550700 tcttgggctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggttcggttcggttgctgagatgcaaaccgcaaac 33550799  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaa 636  Q
    || ||| ||||| |||||||||||||||||| |||||||    
T  33550800 cgaaccaaaccgcgcggttcagtgcaaaagtaatctgaa 33550838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 13801783 - 13801539
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||     |||||||||    
T  13801783 gaaacaaattcatcagtggaaatgaattgaaagagatgaaaaggaattagaatcgaacctgatggtgcaacaatggaaaaattgaatcaaaagagattat 13801684  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||||    
T  13801683 tcttgagctatgtaattgggctagtacatatttaagtaatattcattattcttgcggtttggtttggtttggttcagttgatgagatgcaaaccgcaaac 13801584  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    ||     |||| ||||||||| | ||||||||||| ||||||||||||||    
T  13801583 cg-----aaccatgcggttcaatacaaaagtcatccgaattcatccgaac 13801539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 403 - 632
Target Start/End: Original strand, 15860005 - 15860238
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaa----atcgaaagagattatt 498  Q
    ||||||||||||||||| |||||||||||||||||||  ||| |||||||||||  | ||||||||||||||||||||||    ||| ||||||||||||    
T  15860005 gaaacaaattcatcactaaaaatgaattgaaagagatagaaaagaattagaatcggaactgatggtgcaacaatggaaaatctaatcaaaagagattatt 15860104  T
Q  499 cttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaacc 598  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| || |||| ||||||| |||||||    
T  15860105 cttgagctatgtaattgggctagtacatgtttaattaatattcattattcttgcagtttggtttggtttggttcggttggtgaggtgcaaactgcaaacc 15860204  T
Q  599 graccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
      | |||||||  |||||||||| ||||||||||    
T  15860205 aaatcgaaccgcacggttcagtgtaaaagtcatc 15860238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 25137421 - 25137669
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||||||||  || |||||||||||| | || ||||||||||     |||||||||    
T  25137421 gaaacaaattcatcactggaaatgaattgaaagagaaggaaatgaattagaattgaacctgatggtgcaatattgaaaaaatcgaatcaaaagagattat 25137520  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||  ||||| ||||| || ||||||||| ||||| |||    
T  25137521 tcttgggctatgtaattgggatagtacatgtttaagtaatattcattattattgtggtttggttcagtttggttcggttgatgagatgcataccgc-aac 25137619  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |  ||| ||||| |||||||||||||||||||||| ||||||||||||||    
T  25137620 caaaccaaaccgcgcggttcagtgcaaaagtcatccgaattcatccgaac 25137669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 10390987 - 10390847
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10390987 tattacattaactctaatattgccaacttgttacaaaataaacataagacattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 10390888  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  10390887 aataggtaaaattaagaagaaatataagaatgaaacaaatt 10390847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 10390832 - 10390597
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaat-----cgaaagagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||     ||||| |||||||    
T  10390832 gaaacaaattcatcactggaaatgaattgaaagagatggaaaggaattaaaatcgaatctgatggtgcaacaatggaaaaattgaatcgaaaaagattat 10390733  T
Q  498 tctt-gagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaa 596  Q
    |||| |||||| |||||| ||||| ||               |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  10390732 tctttgagctacgtaatttggctacta---------------ttcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaa 10390648  T
Q  597 ccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
     || ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  10390647 tcgaaccgaaccgcgcggttcagtgcaaaagtcatttgaattcatccgaac 10390597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 15859850 - 15859990
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  15859850 tattacattaactctaatattgccaacttgttagaaaataaacataggacattttattttgttgtttatatgctaaaatattaggtaaaatttatatcaa 15859949  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  15859950 aataggtaaaattaagaagaaacataagcatgaaacaaatt 15859990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 13801938 - 13801798
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  13801938 tattacattaactctaatattgccaatttgttacaaaataaacatagaacattttattttgatgtttatatgataacatattaggtaaaacttatatcaa 13801839  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| |||||||||||| |||||    
T  13801838 aataggtaaaattaagaagaaacataagcatgaaataaatt 13801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 33550445 - 33550585
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  33550445 tattacattaactctaaaattgccaacttgttacaaaataaacataggacatgttattttgttgtttatatgataaattattaggtaaaacttatatcaa 33550544  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||  |||||||||||||||| ||| | ||||||||||||    
T  33550545 aataattaaaattaagaagaaacatatgaatgaaacaaatt 33550585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 276 - 372
Target Start/End: Original strand, 25136897 - 25136993
Alignment:
Q  276 acattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 372  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25136897 acattaactctaatattgtcaacttgttacaaaacaaacataggacattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 25136993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 12270905 - 12271008
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  12270905 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 12271004  T
Q  644 gaac 647  Q
    ||||    
T  12271005 gaac 12271008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 35039833 - 35039759
Alignment:
Q  338 tatatgataaaatattaggtaaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  35039833 tatatgataaaatattaggtaaaacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaatt 35039759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 5866742 - 5866639
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  ||||| |||| ||| ||||||    
T  5866742 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagacatccgaactcatcc 5866643  T
Q  644 gaac 647  Q
    ||||    
T  5866642 gaac 5866639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 10494334 - 10494260
Alignment:
Q  274 ttacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaa 348  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||  |||||||    
T  10494334 ttacattaactataatattgccaacttattacaaaataaacataggaaattttatttagttgtttacgtgataaa 10494260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 516 - 631
Target Start/End: Complemental strand, 10494079 - 10493964
Alignment:
Q  516 ggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggt 615  Q
    |||||||||| |||||||||| |   ||||||||||| ||||||||||||||| ||  | ||||||||||||||| |||||||| | |||||    ||||    
T  10494079 ggctagtacaagtttaagtaacaacgattattcttgcagtttggtttggtttggtttagttgctgagatgcaaactgcaaaccgaatcgaactacacggt 10493980  T
Q  616 tcagtgcaaaagtcat 631  Q
    ||||||||||||||||    
T  10493979 tcagtgcaaaagtcat 10493964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 35040182 - 35040115
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgttta 339  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||    
T  35040182 tattacattgactctaatattgccaacttattacaaaataaacatagggcattttattttgttgttta 35040115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 273 - 351
Target Start/End: Complemental strand, 5287868 - 5287790
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaata 351  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| |  ||||||||||  ||||||||||||||||||    
T  5287868 attacattaactctaatattgccaacttataacaaaataaacatatgtcattttatttttctgtttatatgataaaata 5287790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 5874222 - 5874171
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5874222 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 5874171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 12270569 - 12270620
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  12270569 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 12270620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 13802048 - 13802001
Alignment:
Q  217 cggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  13802048 cggtttggtttggttcagttgatttttaaaaagtcatccaaaccaaac 13802001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 13810935 - 13810888
Alignment:
Q  217 cggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  13810935 cggtttggtttggttcagttgatttttaaaaagtcatccaaaccaaac 13810888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 33550328 - 33550383
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  33550328 aaaacatgatgtttagtttggttcggttgatttttaaaaagtcatccaaaccaaac 33550383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 364 - 412
Target Start/End: Original strand, 25137358 - 25137406
Alignment:
Q  364 tatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  25137358 tatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaatt 25137406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 10590863 - 10590914
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  10590863 catgcggtttggtttggttcggttgatttttaaaaagtcatcccaaccaaac 10590914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 5287977 - 5287923
Alignment:
Q  210 aaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||    
T  5287977 aaacatgcagtttggtttggttcggttgatttttaaaaagtcatccaaacgaaac 5287923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 35040280 - 35040231
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaa 262  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  35040280 catgcggtttggtttggtttggttgatttttaaaaagtcatccaaaccaa 35040231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 15859738 - 15859789
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||| ||| ||||||||||||| |||||||||||||||||    
T  15859738 catgcggtttggtttgattcggttgatttttaaatagtcatccaaaccaaac 15859789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 10494262 - 10494226
Alignment:
Q  404 aaacaaattcatcactgaaaatgaattgaaagagatg 440  Q
    |||||||||||||||||||||||||||||| ||||||    
T  10494262 aaacaaattcatcactgaaaatgaattgaaggagatg 10494226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 10494439 - 10494400
Alignment:
Q  225 tttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  10494439 tttggttcggttgatttttaaaaagtcatccaaactaaac 10494400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 25136784 - 25136835
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||  ||||||||| ||||  |||||||||||||||||||||||||    
T  25136784 catgcggttcggtttggttcggttggattttaaaaagtcatccaaaccaaac 25136835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 158; Significance: 1e-83; HSPs: 4)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 401 - 643
Target Start/End: Complemental strand, 69343 - 69096
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagatt 495  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||||||||     |||||||    
T  69343 atgaaacaaatttatcactggaaatgaattgaaagagatggaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagatt 69244  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||    
T  69243 attattgggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcgggttgttttggtttggttcggttgctgagatgcaaaccgcaa 69144  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||  ||||||||| |||||||| ||||||||||||| ||||||||||    
T  69143 accaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatcc 69096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 451 - 643
Target Start/End: Complemental strand, 77399 - 77202
Alignment:
Q  451 agaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcatta 545  Q
    |||||| ||| |||||||||||||||||||||||||||     || ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  77399 agaatcgaatttgatggtgcaacaatggaaaaatcgaatcaaaagtgattattattgggctatgtaattaggctagtacatgtttaagtaatattcatta 77300  T
Q  546 ttcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    ||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||| ||||||||||    
T  77299 ttcttgcgggttgttttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatcc 77202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 69496 - 69356
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||||| ||||    
T  69496 tattatattaactctaatattgccaacttgttacaaaataaacataggacattttattttgttgttttcatgataaaatattaggtgaaacttatgtcaa 69397  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  69396 aataagtaaaattaagaagaaacataagcatgaaacaaatt 69356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 69610 - 69559
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  69610 catgtggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 69559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 2e-82; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 40899890 - 40899641
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||  ||| |||||||||||||||||||||||||||     |||||||||    
T  40899890 gaaataaattcatcactggaaatgaatttaaagagatggaaaggaattagaattgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattat 40899791  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
     |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  40899790 ccttgggctatgtaattgggctattacatgtttaagtaacattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaac 40899691  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || ||| ||||| ||||||||| |||||||||||| ||||||||||||||    
T  40899690 cgaaccaaaccgcgcggttcagcgcaaaagtcatccgaattcatccgaac 40899641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 401 - 647
Target Start/End: Original strand, 48996354 - 48996605
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagatt 495  Q
    |||||||||||| |||||||||||| ||||||||||| || ||| ||||||||||| ||| |||||||||||||||| ||||||||||     |||||||    
T  48996354 atgaaacaaatttatcactgaaaataaattgaaagaggtggaaaggaattagaatcgaatttgatggtgcaacaatgaaaaaatcgaatcaaaagagatt 48996453  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  48996454 attcttaggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaa 48996553  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    | |  ||||||||| |||||||| ||||||||||||| ||||| ||||||||    
T  48996554 atcaaaccgaaccgcgcggttcattgcaaaagtcatccgaattgatccgaac 48996605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 403 - 646
Target Start/End: Complemental strand, 30193786 - 30193538
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||| |||| || ||||||||||||||||||||||||||||     ||| |||||    
T  30193786 gaaacaaattcatcactgtaaatgaattgaaagagatggaaaggaattaaaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagaaattat 30193687  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| ||||||    
T  30193686 tcttgagctatgtaattgggataatacatatttaagtaatattcattattcttgcggtatggtttggtttggttcggttgctgagatgcaaactgcaaac 30193587  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaa 646  Q
     | |||||||||  ||||||| ||||||||||||  |||||||||||||    
T  30193586 tgaaccgaaccgcacggttcattgcaaaagtcatacgaattcatccgaa 30193538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 403 - 636
Target Start/End: Original strand, 6333593 - 6333836
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||||||| |||||||||| |||     |||||||||    
T  6333593 gaaacaaattcatcactggaaatgaattgaaagagatggaaatgaattagaatcgaacctgatggtgcaacgatggaaaaattgaatcaaaagagattat 6333692  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcg-----gtttggtttggtttgattcggctgctgagatgcaaaccg 592  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     ||||||||||||||| ||||| |||| |||||||| |||    
T  6333693 tcttgagctatgtaattgggctagtacatatttaagtaatattcattattcttgcggtttagtttggtttggtttggttcggttgctaagatgcaagccg 6333792  T
Q  593 caaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaa 636  Q
    |||| || |||||| || ||||||||||| ||||||||||||||    
T  6333793 caaatcgaaccgaatcgcgcggttcagtgtaaaagtcatctgaa 6333836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 403 - 636
Target Start/End: Original strand, 32136969 - 32137207
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||||||||||||||||  ||||||||||||||||||| ||| |||||| |||| || ||||||||||||||||| ||||||||||     ||| |||||    
T  32136969 gaaacaaattcatcacttgaaatgaattgaaagagatggaaaggaattaaaatcgaacctgatggtgcaacaatgaaaaaatcgaataaaaagaaattat 32137068  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||    
T  32137069 tcttaagctatgtaattgggctagtacatgtttaagtaatattcatcattcttgtggtttggtttgatttggttcggttgctgagatgcaaaccgcaaac 32137168  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaa 636  Q
    |  |||||||||  ||||||| |||||||||||||||||    
T  32137169 caaaccgaaccgcacggttcattgcaaaagtcatctgaa 32137207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 403 - 630
Target Start/End: Original strand, 52344985 - 52345216
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    ||||||||||||||| |||| |||||||||||||| || |||| | |||||||| || |||||| ||||| |||||||||||| ||     || || |||    
T  52344985 gaaacaaattcatcagtgaatatgaattgaaagagttggaaataagttagaatcgaacctgatg-tgcaataatggaaaaatcaaatcaaaagcgactat 52345083  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  52345084 tcttgagctatgcaatcggactagtacatgtttaagtaatattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaac 52345183  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtca 630  Q
    || ||||||||||||||||||||||||||||||    
T  52345184 cgaaccgaaccgtgcggttcagtgcaaaagtca 52345216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 10218960 - 10219199
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaaa-----gagattat 497  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| || | ||||||||||||||||||||||| ||      ||||||||    
T  10218960 gaaacaaattcatcactgaaaatgaattgaaagagatggaaaggaattagaatcgaaccagatggtgcaacaatggaaaaatctaatcaaatgagattat 10219059  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |       |||||||||||||||||||    
T  10219060 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggt---act-------tgagatgcaaaccgcaaac 10219149  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |  ||||||||| ||||||||||| |||||||||| || ||||| |||||    
T  10219150 caaaccgaaccgcgcggttcagtgtaaaagtcatccgagttcattcgaac 10219199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 10218805 - 10218945
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10218805 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 10218904  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  10218905 aataggtaaaattaagaagaaacataagcatgaaacaaatt 10218945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 403 - 647
Target Start/End: Complemental strand, 8176408 - 8176169
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattat 497  Q
    |||| |||||||| |||||||||||||| ||||||||| ||| ||||||| ||| || ||||||||||||||||||||||||||||     |||||||||    
T  8176408 gaaaaaaattcataactgaaaatgaattaaaagagatggaaaggaattaggatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattat 8176309  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    | ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||          |||||||||||||||||||||     
T  8176308 ttttgggctatgtaattgggctagtacatgtttaagtaatcttcattattcttgcggtttggtttggt----------tgctgagatgcaaaccgcaaat 8176219  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    || |||||||   |||||||||||||||||||||  || |||||||||||    
T  8176218 cgaaccgaacgacgcggttcagtgcaaaagtcattcgagttcatccgaac 8176169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 23937483 - 23937343
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23937483 tattacattaactctaatattgcaaacttgttacaaaataaacataggacattttattttgttgtttatatgataaaatattaggtaaagcttatatcaa 23937384  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  23937383 aataggtaaaattaagaagaaacataagcatgaaacaaatt 23937343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 30193941 - 30193801
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30193941 tattacattaactctaatattgccaacttgttacaaaataaacataggacattttattttgatgtttatatgataaaatattaggtaaaacttatatcaa 30193842  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  30193841 aataggtaaaattaagaagaaacataagcatgaaacaaatt 30193801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 40900045 - 40899905
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40900045 tattacattaactctaatattgccaacttattacaaaataaacatagggcattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 40899946  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  40899945 aataggtaaaattaagaagaaatataagcatgaatcaaatt 40899905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 403 - 647
Target Start/End: Original strand, 31301676 - 31301915
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcg------aaagagatta 496  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||||| || ||||||||||||||||| |||| |||      ||| | ||||    
T  31301676 gaaacaaattcatcactggaaatgaattgaaggagatggaaatgaattagaatcgaaactgatggtgcaacaatgaaaaagtcgaataaaaaaaaaatta 31301775  T
Q  497 ttcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaa 596  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||          ||||| |||||||||||||||||||||    
T  31301776 ttcttgagttatgtaattgggctaatacaagtttaagtaatattgattattcttgcggtttgg----------ttcggttgctgagatgcaaaccgcaaa 31301865  T
Q  597 ccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    ||| || ||||| || ||||||||| |||||||||||||||||||||||||    
T  31301866 ccgaactgaaccatgtggttcagtg-aaaagtcatctgaattcatccgaac 31301915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 403 - 632
Target Start/End: Complemental strand, 40806623 - 40806397
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcg-----aaagagattat 497  Q
    |||||||||| |||| || ||||||||||||||||||| ||| ||||||||||| || |   || |||||||||| ||||||||     |||||||||||    
T  40806623 gaaacaaatttatcattggaaatgaattgaaagagatggaaaggaattagaatcgaacc---tgttgcaacaatgaaaaaatcgaatcaaaagagattat 40806527  T
Q  498 tcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaac 597  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||      
T  40806526 tcttgagctatgtaattgagctagtacatatttaagtaatattcattattcttgcggtttggtttggtttggttcagttgctgagatgcaaaccgcaa-- 40806429  T
Q  598 cgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
       | | ||||||||||||||||| ||||||||||    
T  40806428 ---atcaaaccgtgcggttcagtgtaaaagtcatc 40806397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 273 - 412
Target Start/End: Original strand, 6333439 - 6333578
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaaa 372  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  6333439 attacattaactctaatattaccaacttgttacaaaataaacataggacattttattttgatgtttatatgataaaatattatgtaaaatttatatcaaa 6333538  T
Q  373 atatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  6333539 atatgtaaaattaagaagaaacataagcatgaaacaaatt 6333578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 272 - 411
Target Start/End: Original strand, 32136814 - 32136953
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32136814 tattacattaactctaatattgtcaacttgtaacaaaataaacataggacattttattttgttgtttatatgataaaatattaggtaaaacttatataaa 32136913  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaat 411  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  32136914 aataggtaaaattaagaagaaacataagcatgaaacaaat 32136953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 8176563 - 8176423
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  8176563 tattacattaactctaatattgcccacttgttacaaaataaacacaggacattttattttgctgtttatatgataaaatattaggaaaatcttatatcaa 8176464  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  8176463 aataggtaaaattaagaagaaacataagcatgaaacaaatt 8176423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 401 - 596
Target Start/End: Complemental strand, 23937330 - 23937130
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagatt 495  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||  ||  |||||||||||||||||||||||| ||     |||||||    
T  23937330 atgaaacaaattcatcactagaaatgaattgaaagagatggaaaggaattagaatagaacatgatggtgcaacaatggaaaaatcaaatctaaagagatt 23937231  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||| | || ||||||||||||| |||    
T  23937230 attcttgagttatgtaattggactagtatatgtttaagtaatatttattattcttgcggtttagtttggtttggttcagttgttgagatgcaaaccacaa 23937131  T
Q  596 a 596  Q
    |    
T  23937130 a 23937130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 40806778 - 40806638
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  40806778 tattacattaactctaatattgtcaacttgttacataataaacataggacattttattttgttgtttatatgataaaatgttagataaaacttatatcaa 40806679  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||| ||||||||||| ||||||||||||||||||    
T  40806678 aataggtaaagttaagaagaaacataagcatgaaacaaatt 40806638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 48996201 - 48996341
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  48996201 tattacattaactctaatattgtcaacttgtcacaaaataaacataggaaattttattttgttgttttcatgataaaatattaggtaaaatttatatcaa 48996300  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||| ||||||||||||    
T  48996301 aataggtaaaattaagaagaaacataagtatgaaacaaatt 48996341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 403 - 595
Target Start/End: Original strand, 43630828 - 43631007
Alignment:
Q  403 gaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaaagagattattcttg 502  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||  | |||||||||||||| ||||||             |||||    
T  43630828 gaaacaaattcatcactgcaaatgaattgaaagagatggaaaggaattagaatcgaacttaatggtgcaacaatgaaaaaat-------------tcttg 43630914  T
Q  503 agctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  43630915 agctatgtagttgggctattacatttttaagtaatattcattattcttgcggtttggtttggtttggttcggttgctgagatgtcaaccgcaa 43631007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 528 - 647
Target Start/End: Complemental strand, 26477869 - 26477750
Alignment:
Q  528 tttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaag 627  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||  |||||||||  ||||| ||| ||||||    
T  26477869 tttaagtaatattcattattcttgtggattggtttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcacggtttagtacaaaag 26477770  T
Q  628 tcatctgaattcatccgaac 647  Q
    ||||| ||||||||||||||    
T  26477769 tcatccgaattcatccgaac 26477750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 495 - 632
Target Start/End: Original strand, 52345225 - 52345352
Alignment:
Q  495 tattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgca 594  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||          ||||| |||||||||||||||| ||    
T  52345225 tattcttgagctatgcaattgggctagtacatgtttaagtaatattcattattcttgcggtttgg----------ttcggttgctgagatgcaaaccaca 52345314  T
Q  595 aaccgraccgaaccgtgcggttcagtgcaaaagtcatc 632  Q
    ||||| |||||||| |||| |||||| |||||||||||    
T  52345315 aaccgaaccgaaccatgcgattcagtacaaaagtcatc 52345352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 542 - 654
Target Start/End: Complemental strand, 5261517 - 5261404
Alignment:
Q  542 attattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcat 641  Q
    ||||||||||| |||||||||| |||| ||||  | |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5261517 attattcttgcagtttggtttgatttggttcgatttctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaattcat 5261418  T
Q  642 ccgaa-caagtgcg 654  Q
    ||||| ||||||||    
T  5261417 ccgaatcaagtgcg 5261404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 29639994 - 29640097
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  29639994 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 29640093  T
Q  644 gaac 647  Q
    ||||    
T  29640094 gaac 29640097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 50570682 - 50570579
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  50570682 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 50570583  T
Q  644 gaac 647  Q
    ||||    
T  50570582 gaac 50570579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 43630695 - 43630783
Alignment:
Q  273 attacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaa 361  Q
    ||||||||||||||||||||||  | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43630695 attacattaactctaatattgcatatttgttacgaaataaacataggacattttattttgttgtttatatgataaaatattaggtaaaa 43630783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 42558082 - 42558185
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||  |||||||||  |||||||||| ||| ||||||    
T  42558082 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatcc 42558181  T
Q  644 gaac 647  Q
    ||||    
T  42558182 gaac 42558185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 29643431 - 29643328
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||| || ||||||| ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  29643431 tatttttgcggtttggtttggtttggttcggttgctgagatgcaagccacaaaccgaaccgaaccgcgcggttcagtttaaaagtcatccgaactcatcc 29643332  T
Q  644 gaac 647  Q
    ||||    
T  29643331 gaac 29643328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 36078683 - 36078786
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||| |||||| | ||||||||| ||||||||||  |||||||||| ||| ||||||    
T  36078683 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaactgcaaactgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 36078782  T
Q  644 gaac 647  Q
    ||||    
T  36078783 gaac 36078786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 5261931 - 5261851
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  5261931 tattacattaactctaatattgccaacttgttaaaaaataaacattggacattttattttgttgtttacatgataaaatat 5261851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 52344849 - 52344940
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaata--aacataggaaattttattttgttgtttatatgataaaatattaggtaaaa 361  Q
    |||| |||||||||||||||||| ||||||||||||||||  |||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  52344849 tattccattaactctaatattgccaacttgttacaaaatataaacataagatattttattttgctgtttatatgataaaatattaggtaaaa 52344940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 401 - 488
Target Start/End: Original strand, 29639730 - 29639817
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa 488  Q
    ||||||||||||||||| || |||||||||||| |||||| ||| ||||||||||| || |||||| |||||||||||||||||||||    
T  29639730 atgaaacaaattcatcattggaaatgaattgaaggagatggaaaggaattagaatcgaacctgatgatgcaacaatggaaaaatcgaa 29639817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 51394835 - 51394915
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatat 352  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||| ||| |||||| ||||||||||||    
T  51394835 tattacattaattctaatattgccaacttattacaaaataaacataggacattttatattgctgtttacatgataaaatat 51394915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 31301366 - 31301426
Alignment:
Q  277 cattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtt 337  Q
    |||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  31301366 cattaactctaatattgccaacttgttacaaaataaacataggacgttttattttgttgtt 31301426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 40900153 - 40900102
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40900153 catgcggtttggtttggttcagttgatttttaaaaagtcatccaaaccaaac 40900102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 31301607 - 31301661
Alignment:
Q  358 aaaacttatatcaaaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  31301607 aaaacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaatt 31301661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 5262034 - 5261983
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  5262034 catgcggtttggtttagttcagttgatttttaaaaagtcatccaaaccaaac 5261983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 23937592 - 23937537
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  23937592 aaaatatgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 23937537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 29644195 - 29644144
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  29644195 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 29644144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 30194045 - 30193994
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  30194045 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 30193994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 50571028 - 50570977
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  50571028 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 50570977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 544 - 625
Target Start/End: Original strand, 51395253 - 51395334
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaa 625  Q
    ||||||||||||||||||||||||| |||| || || ||||| |||||| |||| | ||||||| | |||||||||||||||    
T  51395253 tattcttgcggtttggtttggtttggttcgacttctcagatgtaaaccgtaaactgaaccgaactgcgcggttcagtgcaaa 51395334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 36077586 - 36077636
Alignment:
Q  214 atgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  36077586 atgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 36077636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 42557737 - 42557787
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaa 263  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  42557737 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaa 42557787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 4233672 - 4233822
Alignment:
Q  25 ttttaatttcattaaatcacctacaaacaaaatgaaatgaatggttgac---aaaatcaaaaggcaataaacaaatc---caatattaaaccaacaatga 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||  ||   |||||||||  | || || ||||||    |||||||||||||||||||    
T  4233672 ttttaatttcattaaatcacctacaaacaaaaggaaatgaattgtgtacaaaaaaatcaaa--gaaaaaatcaaatcaaataatattaaaccaacaatga 4233769  T
Q  119 agccgttacaaaacatactctcctatatatttctcatttcattggagttcatt 171  Q
    || | || |||||||||  ||| | |||||| |||||||||||| | ||||||    
T  4233770 agtcatttcaaaacataacctcatgtatattcctcatttcattgcaattcatt 4233822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 29636786 - 29636837
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  29636786 catgcggtttggtttggttcggttgatttttaaaaagccatccaaaccaaac 29636837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 40806888 - 40806837
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| ||| ||||||||| ||||||||||||||| |||||||||||||||    
T  40806888 catgcgatttggtttggttcggttgatttttaaaaaatcatccaaaccaaac 40806837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 43630586 - 43630641
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| ||||||||| ||||||||  ||||||||||||||||||||||||| |||||    
T  43630586 aaaatatgcggtttggtttggtttggttgatttttaaaaagtcatccaaatcaaac 43630641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 48996097 - 48996148
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||| ||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  48996097 catgtggtttggtttggttcggttgatttttaaaaagttatccaaaccaaac 48996148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 10218691 - 10218742
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||| ||||||||||||||| | |||||||||||| ||||    
T  10218691 catgcggtttggtttgattcagttgatttttatatagtcatccaaacaaaac 10218742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 32136705 - 32136756
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||| ||| |||||||||  |||||||||||||| |||||||||||||||    
T  32136705 catgcgatttggtttggttcgattgatttttaaaaattcatccaaaccaaac 32136756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 412
Target Start/End: Original strand, 43630778 - 43630813
Alignment:
Q  377 gtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||||||||||||||| ||||||||||||||||||    
T  43630778 gtaaaattaagaagaaacataagcatgaaacaaatt 43630813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 412
Target Start/End: Original strand, 52344935 - 52344970
Alignment:
Q  377 gtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    ||||||||||||||||| ||||||||||||||||||    
T  52344935 gtaaaattaagaagaaacataagcatgaaacaaatt 52344970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 14866785 - 14866823
Alignment:
Q  209 aaaacatgcggtttagtttggttcagttgatttttaaaa 247  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  14866785 aaaacatgcggtttggtttggttcagttgacttttaaaa 14866823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 45983798 - 45983847
Alignment:
Q  549 ttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaacc 598  Q
    |||||||||||||||||||||||||| || | | ||| ||||||||||||    
T  45983798 ttgcggtttggtttggtttgattcggttggtaaaatgaaaaccgcaaacc 45983847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 150; Significance: 8e-79; HSPs: 6)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 401 - 647
Target Start/End: Original strand, 106310 - 106561
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagatt 495  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||||||||     ||| |||    
T  106310 atgaaacaaatttatcactggaaatgaattgaaagagatggaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcgaataaaaagaaatt 106409  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaa 595  Q
    ||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| || |||||||||||||||||    
T  106410 attattaggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcgggttggttgggtttggttcggttgttgagatgcaaaccgcaa 106509  T
Q  596 accgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    |||  ||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  106510 accaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatccgaac 106561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 401 - 568
Target Start/End: Original strand, 128917 - 129089
Alignment:
Q  401 atgaaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcg-----aaagagatt 495  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||||||     |||||||||    
T  128917 atgaaacaaatttatcactgaaaatgaattgaaagagatggaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcgaatataaagagatt 129016  T
Q  496 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttg 568  Q
    ||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  129017 attattgggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcgggttggtttggtttg 129089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 106156 - 106296
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||||    
T  106156 tattacattaactctaatattgccaacttgttacaaaataaacataggaaattttattttgttgtttacataataaaatattaggtgaaacttatgtcaa 106255  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  106256 aataagtaaaattaagaagaaacataagcatgaaacaaatt 106296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 128763 - 128903
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgataaaatattaggtaaaacttatatcaa 371  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||||| ||||    
T  128763 tattacattaactctaatattgccaacttgtaacaaaataaacataggacattttattttgttgttttcatgataaaatattaggtgaaacttatgtcaa 128862  T
Q  372 aatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  128863 aataagtaaaattaagaagaaacataagcatgaaacaaatt 128903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 128649 - 128696
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaacc 260  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  128649 catgtggtttggtttggttctgttgatttttaaaaagtcatccaaacc 128696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 106042 - 106089
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaacc 260  Q
    |||| ||||| ||||||||| |||||||||||||| ||||||||||||    
T  106042 catgtggtttggtttggttcggttgatttttaaaatgtcatccaaacc 106089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 143; Significance: 1e-74; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 404 - 647
Target Start/End: Complemental strand, 47575 - 47327
Alignment:
Q  404 aaacaaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattatt 498  Q
    ||||||||||||||||  ||||||||||||||||||| |||| |||||||||  || |||||| |||||||||||| ||||||||     ||| ||||||    
T  47575 aaacaaattcatcacttgaaatgaattgaaagagatggaaataaattagaatggaacctgatgttgcaacaatggacaaatcgaatcaaaagaaattatt 47476  T
Q  499 cttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaacc 598  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| || ||||||| ||||| ||||||    
T  47475 cttgagctatgtaattgggctagtagatgtttaagtaatattcattattcttgtggtttggtttggtttggttcggttgttgagatgaaaaccacaaacc 47376  T
Q  599 graccgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
      ||||| || ||||||||||||||||||||||| ||||||||||||||    
T  47375 aaaccgagccatgcggttcagtgcaaaagtcatccgaattcatccgaac 47327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 408 - 647
Target Start/End: Complemental strand, 40375 - 40131
Alignment:
Q  408 aaattcatcactgaaaatgaattgaaagagatgaaaatgaattagaatcaaatctgatggtgcaacaatggaaa-----aatcgaaagagattattcttg 502  Q
    ||||||||||||  ||||||||||||||||||| |||| |||||||||  || |||||| |||||||||||| |     |||| ||||| ||||||||||    
T  40375 aaattcatcacttgaaatgaattgaaagagatggaaataaattagaatggaacctgatgttgcaacaatggacaaattgaatcaaaagaaattattcttg 40276  T
Q  503 agctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgrac 602  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| || ||||||| ||||| ||||||  ||    
T  40275 agctatgtaattgggctagtagatgtttaagtaatattcattattcttgtggtttggtttggtttggttcggttgttgagatgaaaaccacaaaccaaac 40176  T
Q  603 cgaaccgtgcggttcagtgcaaaagtcatctgaattcatccgaac 647  Q
    ||| ||  |||||||||||||||||||||| ||||||||||||||    
T  40175 cgagccacgcggttcagtgcaaaagtcatccgaattcatccgaac 40131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 40536 - 40395
Alignment:
Q  272 tattacattaactctaatattgctaacttgttacaaaataaacataggaaattttattttgttgtttatatgat-aaaatattaggtaaaacttatatca 370  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||| ||  |||||||||||||||||||| || |||||||| ||||||||||||||||    
T  40536 tattacattgactctaatattaccaacttgttacaaaataaacataagacgttttattttgttgtttatatcataaaaatatttggtaaaacttatatca 40437  T
Q  371 aaatatgtaaaattaagaagaaatataagcatgaaacaaatt 412  Q
    |||||  |||||||||||||||| |||||||| |||||||||    
T  40436 aaataaataaaattaagaagaaacataagcattaaacaaatt 40395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 40640 - 40594
Alignment:
Q  218 ggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  40640 ggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 40594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 66; Significance: 1e-28; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 544 - 647
Target Start/End: Complemental strand, 5577 - 5474
Alignment:
Q  544 tattcttgcggtttggtttggtttgattcggctgctgagatgcaaaccgcaaaccgraccgaaccgtgcggttcagtgcaaaagtcatctgaattcatcc 643  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||  ||| ||||||    
T  5577 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcattcgaactcatcc 5478  T
Q  644 gaac 647  Q
    ||||    
T  5477 gaac 5474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 5953 - 5902
Alignment:
Q  213 catgcggtttagtttggttcagttgatttttaaaaagtcatccaaaccaaac 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5953 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaac 5902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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