View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5128_high_2 (Length: 401)
Name: NF5128_high_2
Description: NF5128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5128_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 32011334 - 32011720
Alignment:
| Q |
1 |
acatatcttacctatctttcatttaacatatatctctctccttaaaatgannnnnnnnnctttgaaggcaaccaatcatatcaacataactttgtgaact |
100 |
Q |
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| T |
32011334 |
acatatcttacctatctttcatttaacatatatctctctccttaaaatgatttttttttctttgaaggcaaccaatcatatcaacataactttgtgaact |
32011433 |
T |
|
| Q |
101 |
aaaattgtaattaataacaagaataattttgttgttatggagtcttataaaaattccatcaaatcttctacatatatataaacatcacatgttgtgtttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32011434 |
aaaattgtaattaataacaagaataattttgttgttatggagtcttataaaaattccatcaaatcttctacatatatataaacatcacatgttgtgtttt |
32011533 |
T |
|
| Q |
201 |
tcttttgttaatctttgttaatatcttgctcttatgtagattttgcaactattttgttgagagaaccttcagcgtaagactgagtgctagagttgtagca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32011534 |
tcttttgttaatctttgttaatatcttgctcttatgtagattttgcaactattttgttgagagaaccttcagcgtaagactgagtgctagagttgtagca |
32011633 |
T |
|
| Q |
301 |
agcaaagttaagaagattccttctccctcctctcgcctttcccttatgcatggcatttctaaatcctcctcgtcctcttctctcttt |
387 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32011634 |
agcaaagttaagaagattccttctccctcctctcgcctttcccttatgcatggcatttctaaatcctcctcgtcctcttctctcttt |
32011720 |
T |
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