View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5129-Insertion-2 (Length: 556)
Name: NF5129-Insertion-2
Description: NF5129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5129-Insertion-2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 513; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 513; E-Value: 0
Query Start/End: Original strand, 8 - 556
Target Start/End: Original strand, 33203399 - 33203947
Alignment:
| Q |
8 |
ctctgtcagatatttactctaataaccaaaacctggcttataattaccctaacacaaacactaatctggatcatttagttaatgatttcaataataacca |
107 |
Q |
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| T |
33203399 |
ctctgtcagatatttactctaataaccaaaacctggcttataattaccctaacacaaacactaatctggatcatttagttaatgatttcaataataacca |
33203498 |
T |
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| Q |
108 |
accaaacaacaacaccaatagcaactgggatttcattgaagagcttattcgtgccgctgattgtttcgataacaatcatcttcaactagctcaagcaata |
207 |
Q |
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| T |
33203499 |
accaaacaacaacaccaatagcaactgggatttcattgaagagcttattcgtgccgctgattgtttcgataacaatcatcttcaactagctcaagcaata |
33203598 |
T |
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| Q |
208 |
ttagagcggctgaatcaacggctacgatctccaaccggtaaaccgttacaccgtgccgcgtttcatttcaaagacgcacttcaatctcttctctccggtt |
307 |
Q |
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| T |
33203599 |
ttagagcggctgaatcaacggctacgatctccaaccggtaaaccattacaccgtgccgcgtttcatttcaaagacgcacttcaatctcttctctccggtt |
33203698 |
T |
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| Q |
308 |
caaaccggattaatccaccacgtctttcttccatggtggagattgttcaaaccataagaaccttcaaggccttttctggaatttcacctattccaatgtt |
407 |
Q |
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| T |
33203699 |
caaaccggactaatccaccgagactttcatccatggtggagattgttcaaaccataagaaccttcaaggccttttctggaatttcacctattccaatgtt |
33203798 |
T |
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| Q |
408 |
ttctattttcacaaccaaccaagcgttgctcgaagcgttgcatggatcgttatacatgcacgttgttgattttgaaattggtcttggaattcaatacgct |
507 |
Q |
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| T |
33203799 |
ttctattttcacaacgaaccaagcgttactcgaagcgttgcatggatcgttatacatgcacgttgttgattttgaaattggtcttggaattcaatacgct |
33203898 |
T |
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| Q |
508 |
tctcttatgaaagagattgctgaaaaagctgttaatggttcgccgttgc |
556 |
Q |
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| T |
33203899 |
tctcttatgaaagagattgctgaaaaagctgttaacggttcgccgttgc |
33203947 |
T |
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