View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5129-Insertion-4 (Length: 341)
Name: NF5129-Insertion-4
Description: NF5129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5129-Insertion-4 |
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Alignment Details
Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 7 - 326
Target Start/End: Original strand, 6661557 - 6661876
Alignment:
| Q |
7 |
agtaatgtcacttagcagtaacaggaacatgcgaagtgttagaaacaaagcacaaagcctaattagaagcaaattacaacttccttctgattcctttgtt |
106 |
Q |
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| T |
6661557 |
agtaatgtcacttagcagtaacaggaacatgcgaagtgttagaaacaaagcacaaagcctaattagaagcaaattacaacttctttctgattcctttgtt |
6661656 |
T |
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| Q |
107 |
ctcactcccttccatcaccttaaaatacccatgtctttagtactctgactcaccaatacattcaaccattagaaaacaaaactctctaaatatcagacgc |
206 |
Q |
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| T |
6661657 |
ctcactcccttccatcaccttaaaatacccatgtctttaatactctgagtcaccaatacattcaaccattagaaaacaaaactctctaaatatcagacgc |
6661756 |
T |
|
| Q |
207 |
tgagtgaatgtgtgttgtgatgaactgcttatttgtgttgaatggatttgaagacatgaaacataatatctaaaaacagtaagttgttgtaaagtaacct |
306 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6661757 |
tgagtgaatgtgtgctgtgatgaactgcttatttgtgttgaatggatttgaagacatgaaacataatatctaaaaacagtaagttgttgtaaagtaacct |
6661856 |
T |
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| Q |
307 |
aatcccaattctgcatggat |
326 |
Q |
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| T |
6661857 |
aatcccaattctgcatggat |
6661876 |
T |
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